HHsearch alignment for GI: 254780271 and conserved domain: PRK13949
>PRK13949 shikimate kinase; Provisional.
Probab=97.68 E-value=7.6e-05 Score=54.51 Aligned_cols=53 Identities=34% Similarity=0.419 Sum_probs=39.4
Q ss_pred CCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHH
Q ss_conf 83588407332176999999987185313101221111110355633035778876
Q gi|254780271|r 114 SNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQA 169 (424)
Q Consensus 114 ~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~ 169 (424)
T Consensus 2 k~I~LiG~mGsGKstiGk~La~~l~~~fiD~D~~I--e-~~~g~sI~eif~~~Ge~ 54 (169)
T PRK13949 2 ARIFLVGYMGAGKTTLGKALARELGLSFIDLDFFI--E-NRFHKTVGDIFAERGEA 54 (169)
T ss_pred CCEEEECCCCCCHHHHHHHHHHHHCCCEEECCHHH--H-HHHCCCHHHHHHHHCHH
T ss_conf 83899799999889999999999599979784999--9-98599999999986989