HHsearch alignment for GI: 254780271 and conserved domain: TIGR00368
>TIGR00368 TIGR00368 Mg chelatase homolog; InterPro: IPR004482 This family of bacterial proteins are variously described as 'hypothetical protein yifB', 'competence protein', 'hypothetical protein' or 'Mg chelatase-related protein'. These proteins are a subset of the magnesium chelatase, ChlI subunit family and either belong to or show significant homology to the non-peptidase homologs of the MEROPS peptidase family S16 (lon protease family, clan SF), IPR001984 from INTERPRO. .
Probab=99.25 E-value=1.5e-11 Score=101.52 Aligned_cols=156 Identities=28% Similarity=0.421 Sum_probs=103.3
Q ss_pred CCCCCCCCEECHHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHH---HHHHH-HHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 2113899134317999999998987421000000269987899---99974-2030859999999999986588752121
Q gi|254780271|r 29 KLIAGPTVFICDECVELCMDIIREENKSSITKSHEGIPNPQEI---LRVLD-EYVIGQGQAKKVLAVAVHNHYKRLAHSS 104 (424)
Q Consensus 29 ~li~g~~~~iC~~Ci~~~~~i~~~e~~~~~~~~~~~~~tP~eI---~~~Ld-~yVIGQ~~AKkavAvAv~nh~rR~~~~~ 104 (424)
T Consensus 143 Slv~G~~~y~~~~L~~vv-~fl~ql~~~~L~~~t~~~~~~~~~~s~~~~~DL~dv~GQ~~akRAleIAa----AG----- 212 (505)
T TIGR00368 143 SLVDGLNVYGADHLKEVV-KFLEQLGSEKLPPRTNTKAKSIINVSLIIDLDLKDVKGQQHAKRALEIAA----AG----- 212 (505)
T ss_pred EEECCCCEEHHHHHHHHH-HHHHHHCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHH----HC-----
T ss_conf 266387402047489999-99976231017775455531034413201044322545101102677753----13-----
Q ss_pred CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCHHHHHHHHH--------------
Q ss_conf 013552256835884073321769999999871853131012211111103556330357788765--------------
Q gi|254780271|r 105 KSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAA-------------- 170 (424)
Q Consensus 105 ~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesii~~L~~~a-------------- 170 (424)
T Consensus 213 --------GHNlll~GPPGsGKTmla~r~~giLP-~L~~~EalE~~-------~v~S~~~~l~~~~~~~rQRPFR~PHHs 276 (505)
T TIGR00368 213 --------GHNLLLLGPPGSGKTMLASRLQGILP-PLTNEEALETA-------RVLSLVGKLIDRKQWKRQRPFRSPHHS 276 (505)
T ss_pred --------CCCEEEECCCCCCHHHHHHHHHCCCC-CCCCHHHHHHH-------HHHHHHHHHHHCCCHHCCCCCCCCCCC
T ss_conf --------56437678249626899987510578-64512666678-------888888757652301106867786500
Q ss_pred --------------HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECC
Q ss_conf --------------422776542233322333200233333344321025689887531058701025
Q gi|254780271|r 171 --------------DYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVP 224 (424)
Q Consensus 171 --------------~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~ 224 (424)
T Consensus 277 AS~~~lvGGG~~P~PGEiSLAhnGvLFLDEl~EF~r~--------------vL~~LR~PlEdg~i~iS 330 (505)
T TIGR00368 277 ASKPALVGGGSIPKPGEISLAHNGVLFLDELPEFKRK--------------VLDALREPLEDGSISIS 330 (505)
T ss_pred CCCCCCCCCCCCCCCCCEEHHCCCCHHHHCCHHHHHH--------------HHHHHCCCCCCCCEEEE
T ss_conf 2566640587522285120200541043222044678--------------99871787426706886