HHsearch alignment for GI: 254780271 and conserved domain: TIGR03499

>TIGR03499 FlhF flagellar biosynthetic protein FlhF.
Probab=97.43  E-value=0.00037  Score=49.68  Aligned_cols=23  Identities=52%  Similarity=0.641  Sum_probs=16.9

Q ss_pred             CCCEEEEECCCCCHHHHHHHHHH
Q ss_conf             68358840733217699999998
Q gi|254780271|r  113 KSNILLVGPTGCGKTYLAQTLAR  135 (424)
Q Consensus       113 ~~NILliGPTGvGKTelAr~LAk  135 (424)
T Consensus       194 ~~vi~lvGPTGVGKTTTiAKLAa  216 (282)
T TIGR03499       194 GGVIALVGPTGVGKTTTLAKLAA  216 (282)
T ss_pred             CCEEEEECCCCCCHHHHHHHHHH
T ss_conf             72799977888757889999999