>cd03236 ABC_RNaseL_inhibitor_domain1 The ATPase domain 1 of RNase L inhibitor. The ABC ATPase, RNase L inhibitor (RLI), is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids. RLI s are not transport proteins and thus cluster with a group of soluble proteins that lack the transmembrane components commonly found in other members of the family. Structurally, RLIs have an N-terminal Fe-S domain and two nucleotide binding domains which are arranged to form two composite active sites in their interface cleft. RLI is one of the most conserved enzymes between archaea and eukaryotes with a sequence identity more than 48%. The high degree of evolutionary conservation suggests that RLI performs a central role in archaeal and eukaryotic physiology.

Probab=93.21  E-value=0.046  Score=35.05  Aligned_cols=24  Identities=38%  Similarity=0.538  Sum_probs=20.6

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHCC
Q ss_conf             588407332176999999987185
Q gi|254780271|r  116 ILLVGPTGCGKTYLAQTLARIIDV  139 (424)
Q Consensus       116 ILliGPTGvGKTelAr~LAk~l~~  139 (424)
T Consensus        29 ~gLiGpNGaGKSTLlk~i~Gll~P   52 (255)
T cd03236          29 LGLVGPNGIGKSTALKILAGKLKP   52 (255)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCC
T ss_conf             999899997099999999679868