>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.

Probab=93.77  E-value=0.049  Score=34.83  Aligned_cols=30  Identities=37%  Similarity=0.566  Sum_probs=23.7

Q ss_pred             CCCCCC-CEEEEECCCCCHHHHHHHHHHHHC
Q ss_conf             522568-358840733217699999998718
Q gi|254780271|r  109 VELAKS-NILLVGPTGCGKTYLAQTLARIID  138 (424)
Q Consensus       109 ~ei~~~-NILliGPTGvGKTelAr~LAk~l~  138 (424)
T Consensus        23 l~i~~Ge~~aivG~sGsGKSTLl~~l~G~~~   53 (178)
T cd03247          23 LELKQGEKIALLGRSGSGKSTLLQLLTGDLK   53 (178)
T ss_pred             EEECCCCEEEEECCCCCHHHHHHHHHHHCCC
T ss_conf             9986999999999998759999999986176