HHsearch alignment for GI: 254780271 and conserved domain: cd03258
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=93.24 E-value=0.05 Score=34.74 Aligned_cols=46 Identities=20% Similarity=0.382 Sum_probs=27.7
Q ss_pred CCCCCCC-EEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHHHCCCCCCCH
Q ss_conf 5225683-58840733217699999998718531310122111111035563303
Q gi|254780271|r 109 VELAKSN-ILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLTEAGYVGEDVENI 162 (424)
Q Consensus 109 ~ei~~~N-ILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~TE~GYvG~Dvesi 162 (424)
T Consensus 26 l~i~~Ge~~~ivG~SGsGKSTllr~i~gL~~-p----~s---G~I~~~g~~i~~~ 72 (233)
T cd03258 26 LSVPKGEIFGIIGRSGAGKSTLIRCINGLER-P----TS---GSVLVDGTDLTLL 72 (233)
T ss_pred EEECCCCEEEEECCCCCHHHHHHHHHHCCCC-C----CC---CEEEECCEECCCC
T ss_conf 8999999999988980589999999967999-9----98---0899999998979