HHsearch alignment for GI: 254780271 and conserved domain: cd03299
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=94.52 E-value=0.024 Score=37.04 Aligned_cols=31 Identities=35% Similarity=0.748 Sum_probs=23.8
Q ss_pred CCCCCCCCEE-EEECCCCCHHHHHHHHHHHHC
Q ss_conf 5522568358-840733217699999998718
Q gi|254780271|r 108 NVELAKSNIL-LVGPTGCGKTYLAQTLARIID 138 (424)
Q Consensus 108 ~~ei~~~NIL-liGPTGvGKTelAr~LAk~l~ 138 (424)
T Consensus 19 s~~v~~Ge~~~iiGpSGsGKSTLlr~i~Gl~~ 50 (235)
T cd03299 19 SLEVERGDYFVILGPTGSGKSVLLETIAGFIK 50 (235)
T ss_pred EEEECCCCEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 87988998999999996359999999974999