HHsearch alignment for GI: 254780271 and conserved domain: pfam00493

>pfam00493 MCM MCM2/3/5 family.
Probab=98.99  E-value=3.4e-09  Score=84.97  Aligned_cols=245  Identities=20%  Similarity=0.287  Sum_probs=143.0

Q ss_pred             HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEHHHHH
Q ss_conf             999997420308599999999999865887521210135522568358840733217699999998718-5313101221
Q gi|254780271|r   70 EILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIID-VPFTMADATT  148 (424)
Q Consensus        70 eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~-~PF~~vdaT~  148 (424)
T Consensus        17 ~l~~siaP~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~---ihiLLvGdPG~gKSqlLk~~~~~~pr~~~t--sg~~   91 (327)
T pfam00493        17 KLARSIAPSIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD---INVLLVGDPGTAKSQLLKYVAKLAPRAVYT--SGKG   91 (327)
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHCCCCEEE--CCCC
T ss_conf             99998597124987999999999808987658888620365---118984699815609999999868870883--1776


Q ss_pred             HHHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
Q ss_conf             111110355---63303577887654227765422333223332002333333443210256898875310587010256
Q gi|254780271|r  149 LTEAGYVGE---DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPP  225 (424)
Q Consensus       149 ~TE~GYvG~---Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~  225 (424)
T Consensus        92 ss~~GLTa~~~~d~~~~~~-~le--aGalvlAd~Gv~cIDEfdk~~~~--------------d~saL~EAMEqqtVsIaK  154 (327)
T pfam00493        92 SSAAGLTAAVVRDPDTGEW-TLE--AGALVLADGGVCCIDEFDKMNEE--------------DRVAIHEAMEQQTISIAK  154 (327)
T ss_pred             CCCCCCEEEEEEECCCCCE-EEE--CCCEEECCCCEEEEECCCCCCHH--------------HHHHHHHHHHHCEEEEEC
T ss_conf             6567761589980688836-983--68477558982785005558876--------------799999999868177633


Q ss_pred             CCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf             55643222430243100012322000467898876412343332111100000001689996410567775220689872
Q gi|254780271|r  226 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIG  305 (424)
Q Consensus       226 ~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~G  305 (424)
T Consensus       155 aGi~~tL~ar~sVlAaaNP~---~g~yd~------------------~------~~---~~--------~ni~Lp~~lLs  196 (327)
T pfam00493       155 AGIVATLNARCSVLAAANPI---FGRYDP------------------K------KS---VA--------ENINLPPPLLS  196 (327)
T ss_pred             CCEEEEECCCCEEEEEECCC---CCCCCC------------------C------CC---HH--------HHCCCCHHHHC
T ss_conf             85389725871799852776---773788------------------8------89---88--------85589767745


Q ss_pred             CCCCEEEECC-CCHHH----HHHHHHHH--------------HHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH---
Q ss_conf             0784267211-10578----99998742--------------67799999999874498999968999999995510---
Q gi|254780271|r  306 RLPVLATLED-LDENS----LIRILSEP--------------KNALIKQYQCLFDMEDVELVFHEDALREIARCAIA---  363 (424)
Q Consensus       306 RlPiiV~L~~-Lt~ed----l~rILtep--------------knsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~---  363 (424)
T Consensus       197 RFDLif~l~D~~~~~~D~~ia~~i~~~~~~~~~~~~~~~~~~~~~~l~~yi~~ar-~~~~P~ls~ea~~~i~~~y~~~R~  275 (327)
T pfam00493       197 RFDLIFVLLDKPDEEKDEELAKHIVDLHRHGEEEEIETEDYVDPELLRKYIAYAR-ENIFPKLSDEAREKLVNYYVELRK  275 (327)
T ss_pred             CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             0107988406898688999999999987446886555688799999999999998-527887798999999999999986


Q ss_pred             ---C-----CCCCHHHHHHH
Q ss_conf             ---6-----78742368999
Q gi|254780271|r  364 ---H-----KTGARGLRSIL  375 (424)
Q Consensus       364 ---~-----niGAR~LrtIi  375 (424)
T Consensus       276 ~~~~~~~~~~iT~R~lesLi  295 (327)
T pfam00493       276 ESEASGSSIPITVRQLESLI  295 (327)
T ss_pred             HCCCCCCCCCCCHHHHHHHH
T ss_conf             42436887472389999999