HHsearch alignment for GI: 254780271 and conserved domain: pfam00493
>pfam00493 MCM MCM2/3/5 family.
Probab=98.99 E-value=3.4e-09 Score=84.97 Aligned_cols=245 Identities=20% Similarity=0.287 Sum_probs=143.0
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHC-CCEEEHHHHH
Q ss_conf 999997420308599999999999865887521210135522568358840733217699999998718-5313101221
Q gi|254780271|r 70 EILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIID-VPFTMADATT 148 (424)
Q Consensus 70 eI~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~-~PF~~vdaT~ 148 (424)
T Consensus 17 ~l~~siaP~i~G~~~vK~ai~l~l~gg~~~~~~~~~~~Rg~---ihiLLvGdPG~gKSqlLk~~~~~~pr~~~t--sg~~ 91 (327)
T pfam00493 17 KLARSIAPSIYGHEDVKKAILLQLFGGVKKNLPDGTRLRGD---INVLLVGDPGTAKSQLLKYVAKLAPRAVYT--SGKG 91 (327)
T ss_pred HHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHCCCCEEE--CCCC
T ss_conf 99998597124987999999999808987658888620365---118984699815609999999868870883--1776
Q ss_pred HHHHHHCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCC
Q ss_conf 111110355---63303577887654227765422333223332002333333443210256898875310587010256
Q gi|254780271|r 149 LTEAGYVGE---DVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPP 225 (424)
Q Consensus 149 ~TE~GYvG~---Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~ 225 (424)
T Consensus 92 ss~~GLTa~~~~d~~~~~~-~le--aGalvlAd~Gv~cIDEfdk~~~~--------------d~saL~EAMEqqtVsIaK 154 (327)
T pfam00493 92 SSAAGLTAAVVRDPDTGEW-TLE--AGALVLADGGVCCIDEFDKMNEE--------------DRVAIHEAMEQQTISIAK 154 (327)
T ss_pred CCCCCCEEEEEEECCCCCE-EEE--CCCEEECCCCEEEEECCCCCCHH--------------HHHHHHHHHHHCEEEEEC
T ss_conf 6567761589980688836-983--68477558982785005558876--------------799999999868177633
Q ss_pred CCCCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHH
Q ss_conf 55643222430243100012322000467898876412343332111100000001689996410567775220689872
Q gi|254780271|r 226 QGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIG 305 (424)
Q Consensus 226 ~~grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~G 305 (424)
T Consensus 155 aGi~~tL~ar~sVlAaaNP~---~g~yd~------------------~------~~---~~--------~ni~Lp~~lLs 196 (327)
T pfam00493 155 AGIVATLNARCSVLAAANPI---FGRYDP------------------K------KS---VA--------ENINLPPPLLS 196 (327)
T ss_pred CCEEEEECCCCEEEEEECCC---CCCCCC------------------C------CC---HH--------HHCCCCHHHHC
T ss_conf 85389725871799852776---773788------------------8------89---88--------85589767745
Q ss_pred CCCCEEEECC-CCHHH----HHHHHHHH--------------HHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHH---
Q ss_conf 0784267211-10578----99998742--------------67799999999874498999968999999995510---
Q gi|254780271|r 306 RLPVLATLED-LDENS----LIRILSEP--------------KNALIKQYQCLFDMEDVELVFHEDALREIARCAIA--- 363 (424)
Q Consensus 306 RlPiiV~L~~-Lt~ed----l~rILtep--------------knsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~~--- 363 (424)
T Consensus 197 RFDLif~l~D~~~~~~D~~ia~~i~~~~~~~~~~~~~~~~~~~~~~l~~yi~~ar-~~~~P~ls~ea~~~i~~~y~~~R~ 275 (327)
T pfam00493 197 RFDLIFVLLDKPDEEKDEELAKHIVDLHRHGEEEEIETEDYVDPELLRKYIAYAR-ENIFPKLSDEAREKLVNYYVELRK 275 (327)
T ss_pred CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH-HHCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 0107988406898688999999999987446886555688799999999999998-527887798999999999999986
Q ss_pred ---C-----CCCCHHHHHHH
Q ss_conf ---6-----78742368999
Q gi|254780271|r 364 ---H-----KTGARGLRSIL 375 (424)
Q Consensus 364 ---~-----niGAR~LrtIi 375 (424)
T Consensus 276 ~~~~~~~~~~iT~R~lesLi 295 (327)
T pfam00493 276 ESEASGSSIPITVRQLESLI 295 (327)
T ss_pred HCCCCCCCCCCCHHHHHHHH
T ss_conf 42436887472389999999