HHsearch alignment for GI: 254780271 and conserved domain: smart00350

>smart00350 MCM minichromosome maintenance proteins.
Probab=98.61  E-value=2.2e-07  Score=72.25  Aligned_cols=232  Identities=17%  Similarity=0.240  Sum_probs=131.7

Q ss_pred             HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEHHHHHHH
Q ss_conf             99997420308599999999999865887521210135522568358840733217699999998718531310122111
Q gi|254780271|r   71 ILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQTLARIIDVPFTMADATTLT  150 (424)
Q Consensus        71 I~~~Ld~yVIGQ~~AKkavAvAv~nh~rR~~~~~~~~~~ei~~~NILliGPTGvGKTelAr~LAk~l~~PF~~vdaT~~T  150 (424)
T Consensus       197 L~~SiaP~I~G~~~vK~allL~L~GG~~~~~~~g~~~Rg~---ihiLLvGDPGtgKSqlLk~~~~iaprsv-ytsG~gsS  272 (509)
T smart00350      197 LSRSLAPSIYGHEDIKKAILLLLFGGVHKNLPDGMKIRGD---INILLLGDPGTAKSQLLKYVEKTAPRAV-YTTGKGSS  272 (509)
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEECCC---EEEEEECCCCCCHHHHHHHHHHHCCCEE-EEECCCCC
T ss_conf             9985497323878899999999708876648988504154---1499846998236299999998588606-87344455


Q ss_pred             HHHHCC---CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCC
Q ss_conf             111035---56330357788765422776542233322333200233333344321025689887531058701025655
Q gi|254780271|r  151 EAGYVG---EDVENIILKLLQAADYNVERAQRGIVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQG  227 (424)
Q Consensus       151 E~GYvG---~Dvesii~~L~~~a~~~v~~a~~~iv~iDEidKi~~~~~~~~~~~dvs~~gvq~~LLkileg~~~~v~~~~  227 (424)
T Consensus       273 ~aGLTaav~rd~~~-ge~~le-a-GALVlAD~GiccIDEfdKm~~--------------~dr~alhEaMEQQtisiaKaG  335 (509)
T smart00350      273 AVGLTAAVTRDPET-REFTLE-G-GALVLADNGVCCIDEFDKMDD--------------SDRTAIHEAMEQQTISIAKAG  335 (509)
T ss_pred             CCCCEEEEEECCCC-CCEEEC-C-CCEECCCCCEEEEEEHHHCCH--------------HHHHHHHHHHHHCEEEEECCC
T ss_conf             57706899981788-837872-5-641205675478521320787--------------789999999974877874375


Q ss_pred             CCCCCCCCEEEEECCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHCC
Q ss_conf             64322243024310001232200046789887641234333211110000000168999641056777522068987207
Q gi|254780271|r  228 GRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDSDNRPVGEVLRNLESEDLVKFGLIPEFIGRL  307 (424)
Q Consensus       228 grk~~~~~~~~Idt~nilfi~~gaf~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DL~~~gliPEl~GRl  307 (424)
T Consensus       336 i~~tL~aR~sVlAAaNP---~~g~yd------------------~------~~s---~~--------eni~l~~~LLSRF  377 (509)
T smart00350      336 ITTTLNARCSVLAAANP---IGGRYD------------------P------KLT---PE--------ENIDLPAPILSRF  377 (509)
T ss_pred             EEEEEECCCEEEEEECC---CCCCCC------------------C------CCC---HH--------HHCCCCHHHHHHC
T ss_conf             17998557359986556---556378------------------8------899---99--------9468980354102


Q ss_pred             CCEEEECC-----CCHHHHHHHHHHH---------------HHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHH
Q ss_conf             84267211-----1057899998742---------------6779999999987449899996899999999551
Q gi|254780271|r  308 PVLATLED-----LDENSLIRILSEP---------------KNALIKQYQCLFDMEDVELVFHEDALREIARCAI  362 (424)
Q Consensus       308 PiiV~L~~-----Lt~edl~rILtep---------------knsLikQy~~Ll~~egV~L~FtdeAi~~IA~~A~  362 (424)
T Consensus       378 DLIf~l~D~~~~~~D~~ia~hil~~h~~~~~~~~~~~~~~~~~~~lrkYI~yar~-~~~P~ls~eA~~~i~~~Y~  451 (509)
T smart00350      378 DLLFVVLDEVDEERDRELAKHVVDLHRYSHPEPDEADEVPISQEFLRKYIAYARE-KIKPKLSEEAAEKLVKAYV  451 (509)
T ss_pred             CEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHH
T ss_conf             3899961589878899999999998741588754556886899999999999986-2899789999999999999