HHsearch alignment for GI: 254780271 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=98.25 E-value=1.5e-06 Score=66.49 Aligned_cols=81 Identities=27% Similarity=0.351 Sum_probs=52.5
Q ss_pred CCCEEEEECCCCCHHHHHHHHHHHHCCC---EEEHHHHHHHHHHHC--------CCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6835884073321769999999871853---131012211111103--------55633035778876542277654223
Q gi|254780271|r 113 KSNILLVGPTGCGKTYLAQTLARIIDVP---FTMADATTLTEAGYV--------GEDVENIILKLLQAADYNVERAQRGI 181 (424)
Q Consensus 113 ~~NILliGPTGvGKTelAr~LAk~l~~P---F~~vdaT~~TE~GYv--------G~Dvesii~~L~~~a~~~v~~a~~~i 181 (424)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 81 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPPGGGVIYIDGEDILEEVLDQLLLIIVGGKKASGSGELRLRLALALARKLKPDV 81 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCE
T ss_conf 97899999997029999999998726689968998759989888987653000112210519999999999998449989
Q ss_pred HHHHHHHHHCCC
Q ss_conf 332233320023
Q gi|254780271|r 182 VYIDEVDKISRK 193 (424)
Q Consensus 182 v~iDEidKi~~~ 193 (424)
T Consensus 82 iiiDei~~~~~~ 93 (148)
T smart00382 82 LILDEITSLLDA 93 (148)
T ss_pred EEEECCHHHCCC
T ss_conf 998275021476