RPSBLAST alignment for GI: 254780271 and conserved domain: pfam07724

>gnl|CDD|116338 pfam07724, AAA_2, AAA domain (Cdc48 subfamily). This Pfam entry includes some of the AAA proteins not detected by the pfam00004 model. Length = 168

 Score =  141 bits (358), Expect = 3e-34
 Identities = 58/212 (27%), Positives = 82/212 (38%), Gaps = 62/212 (29%)

Query: 113 KSNILLVGPTGCGKTYLAQTLARIIDV---PFTMADATTLTEAGYVGEDVENIILKLLQA 169
             + L +GPTG GKT LA+ LA ++          D +   E        E+ + +L+ A
Sbjct: 3   IGSFLFLGPTGVGKTELAKALAELLFGDERALIRIDMSEYME--------EHSVSRLIGA 54

Query: 170 ADYNVERAQRG------------IVYIDEVDKISRKSDNPSITRDVSGEGVQQALLKIME 217
               V   + G            IV IDE++K                 GVQ  LL+I+E
Sbjct: 55  PPGYVGYEEGGQLTEAVRRKPYSIVLIDEIEKAHP--------------GVQNDLLQILE 100

Query: 218 GTIASVPPQGGRKHPQQEFLQVDTTNILFICGGAFAGLDRIISARGEKASIGFSAVVKDS 277
           G   +   + GR        +VD  N LFI  G F       ++R  K+           
Sbjct: 101 GGTLT--DKQGR--------KVDFRNTLFIMTGNFGSEKISDASRLGKSPD--------- 141

Query: 278 DNRPVGEVLRNLESEDLVKFGLIPEFIGRLPV 309
                   L      DL+K G IPEF+GRLP+
Sbjct: 142 ------YELLKELVMDLLKKGFIPEFLGRLPI 167