RPSBLAST alignment for GI: 254780271 and conserved domain: TIGR00635

>gnl|CDD|129721 TIGR00635, ruvB, Holliday junction DNA helicase, RuvB subunit. RuvA specifically binds Holliday junctions as a sandwich of two tetramers and maintains the configuration of the junction. It forms a complex with two hexameric rings of RuvB, the subunit that contains helicase activity. The complex drives ATP-dependent branch migration of the Holliday junction recombination intermediate. The endonuclease RuvC resolves junctions. Length = 305

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 32/120 (26%), Positives = 55/120 (45%), Gaps = 25/120 (20%)

Query: 73  RVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKTYLAQT 132
           ++L E+ IGQ + K+ L + +         ++K     L   ++LL GP G GKT LA  
Sbjct: 1   KLLAEF-IGQEKVKEQLQLFIE--------AAKMRQEAL--DHLLLYGPPGLGKTTLAHI 49

Query: 133 LARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEVDKISR 192
           +A  + V   +     L + G    D+   IL  L+  D         +++IDE+ ++S 
Sbjct: 50  IANEMGVNLKITSGPALEKPG----DLAA-ILTNLEEGD---------VLFIDEIHRLSP 95