RPSBLAST alignment for GI: 254780271 and conserved domain: TIGR00390

>gnl|CDD|161852 TIGR00390, hslU, ATP-dependent protease HslVU, ATPase subunit. This model represents the ATPase subunit of HslVU, while the proteasome-related peptidase subunit is HslV. Residues 54-61 of the model contain a P-loop ATP-binding motif. Cys-287 of E. coli (position 308 in the seed alignment), studied in PubMed:98389714, is Ser in other members of the seed alignment. Length = 441

 Score = 99.1 bits (247), Expect = 2e-21
 Identities = 47/103 (45%), Positives = 69/103 (66%), Gaps = 1/103 (0%)

Query: 68  PQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHSSKSSNVELAKSNILLVGPTGCGKT 127
           P+EI+  LD+Y+IGQ  AKK +A+A+ N Y+R    ++    E+   NIL++GPTG GKT
Sbjct: 3   PREIVAELDKYIIGQDNAKKSVAIALRNRYRRS-QLNEELKDEVTPKNILMIGPTGVGKT 61

Query: 128 YLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAA 170
            +A+ LA++ + PF   +AT  TE GYVG DVE+++  L  AA
Sbjct: 62  EIARRLAKLANAPFIKVEATKFTEVGYVGRDVESMVRDLTDAA 104