RPSBLAST alignment for GI: 254780271 and conserved domain: KOG0745
>gnl|CDD|35964 KOG0745, KOG0745, KOG0745, Putative ATP-dependent Clp-type protease (AAA+ ATPase superfamily) [Posttranslational modification, protein turnover, chaperones]. Length = 564
Score = 442 bits (1137), Expect = e-124
Identities = 214/474 (45%), Positives = 289/474 (60%), Gaps = 69/474 (14%)
Query: 2 SKASNNGSVSKNALYCSFCGKSQHEVRKLIAGPTVFICDECVELCMDIIREENKSSITKS 61
S A N S+S L C C SQ + FI +C + + + + S
Sbjct: 62 SAAPGNKSLSGGGLQCPKCT-SQCTPLETFVSSQGFILCKCNKSFVVLYEADGAKPGKLS 120
Query: 62 HEG---------IPNPQEILRVLDEYVIGQGQAKKVLAVAVHNHYKRLAHS--------- 103
P P+EI LD++V+GQ +AKKVL+VAV+NHYKR+ H+
Sbjct: 121 PSNRDGGFQLKPPPTPKEICEYLDKFVVGQEKAKKVLSVAVYNHYKRIYHNEPSRQKELA 180
Query: 104 ------------------------------------SKSSNVELAKSNILLVGPTGCGKT 127
+VEL KSN+LL+GPTG GKT
Sbjct: 181 EASKSAKDRDNPIELEISESNAQWPNNQRQIAKALDEDDEDVELEKSNVLLLGPTGSGKT 240
Query: 128 YLAQTLARIIDVPFTMADATTLTEAGYVGEDVENIILKLLQAADYNVERAQRGIVYIDEV 187
LAQTLAR++DVPF + D TTLT+AGYVGEDVE++I KLLQ A+YNVE+AQ+GIV++DEV
Sbjct: 241 LLAQTLARVLDVPFAICDCTTLTQAGYVGEDVESVIQKLLQEAEYNVEKAQQGIVFLDEV 300
Query: 188 DKISRKSDNPSITRDVSGEGVQQALLKIMEGTIASVPPQGGRKHPQQEFLQVDTTNILFI 247
DKI++K+++ +RDVSGEGVQQALLK++EGT+ +VP +G R+ P+ + +Q+DTTNILFI
Sbjct: 301 DKITKKAESIHTSRDVSGEGVQQALLKLLEGTVVNVPEKGSRRKPRGDTVQIDTTNILFI 360
Query: 248 CGGAFAGLDRIISARGEKASIGFSAVVK-------------DSDNRPVGEVLRNLESEDL 294
GAF GLD+IIS R + S+GF A ++D E+L +ES DL
Sbjct: 361 ASGAFVGLDKIISRRLDDKSLGFGAPSSKGVRANMATKSGVENDAEKRDELLEKVESGDL 420
Query: 295 VKFGLIPEFIGRLPVLATLEDLDENSLIRILSEPKNALIKQYQCLFDMEDVELVFHEDAL 354
+ FG+IPEF+GR PVL L LDE+ L+R+L+EPKNAL KQY+ LF M++VEL F E AL
Sbjct: 421 ISFGMIPEFVGRFPVLVPLHSLDEDQLVRVLTEPKNALGKQYKKLFGMDNVELHFTEKAL 480
Query: 355 REIARCAIAHKTGARGLRSILEKILLDTMFELPMLKGVSSVIISDDVVKGKACP 408
IA+ A+ KTGARGLRSILE +LL+ MFE+P + +V++ ++ VKG+ P
Sbjct: 481 EAIAQLALKRKTGARGLRSILESLLLEAMFEVPG-SDIKAVLVDEEAVKGEKEP 533