HHsearch alignment for GI: 254780272 and conserved domain: CHL00028

Probab=100.00  E-value=0  Score=470.72  Aligned_cols=196  Identities=39%  Similarity=0.740  Sum_probs=188.5

Q ss_pred             CCC-CCEEEEECCCCC--CCCCHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHH
Q ss_conf             245-757976659984--01220034514677998783189899999999999741157697699993687614678999
Q gi|254780272|r   16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI   92 (216)
Q Consensus        16 ~~~-~p~~~e~~~~~~--~~~Di~s~L~~~Riifl~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpGG~v~~glaI   92 (216)
T Consensus         1 Mpig~p~v~~~~~~~~~~~w~Di~~~L~~~Riifl~~~i~~~~a~~iia~ll~L~~e~~~kpI~lyINSpGG~v~~glaI   80 (201)
T CHL00028          1 MPIGVPKVPFRLPGEEDASWVDLYNRLYRERLLFLGQELDDEIANQLIGLMVYLSIEDDTKDLYLFINSPGGSVISGIAI   80 (201)
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
T ss_conf             99888743456899876614549788863788998980178999999999999726497999899998998548689999


Q ss_pred             HHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999864487348998315566520000246777145544156644125666-6555412899999999999999999998
Q gi|254780272|r   93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVK  171 (216)
Q Consensus        93 yD~i~~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~-~~G~~~di~~~a~el~~~~~~l~~i~a~  171 (216)
T Consensus        81 yD~m~~~~~~V~Ti~~G~AaS~aslilaaG~kgkR~~~pns~iMIHqp~~g~~~G~a~di~~~a~el~~~~~~i~~iya~  160 (201)
T CHL00028         81 YDTMQFVKPDVHTICLGLAASMGSFILAGGEITKRLAFPHARVMIHQPASSFYEGQASEFVLEAEELLKLRETLTRVYVQ  160 (201)
T ss_pred             HHHHHHCCCCEEEEEEEHHCCHHHHHHHCCCCCCEEECCCHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99998559995899760010536788614887635626585561244546767897899999999999999999999998


Q ss_pred             HCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEEECCCCCC
Q ss_conf             7199989999972458588889999758864460454225
Q gi|254780272|r  172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI  211 (216)
Q Consensus       172 ~Tg~~~e~i~~~~~rD~~lsa~EA~eyGliD~Ii~~~~e~  211 (216)
T Consensus       161 ~Tg~~~~~I~~~~~rd~~msa~EA~~yGliD~Il~~~~~~  200 (201)
T CHL00028        161 RTGKPLWVISEDMERDVFMSATEAKAYGIVDLVAVENLEE  200 (201)
T ss_pred             HHCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEECCCCCCC
T ss_conf             8795999999871578426799999819988882578666