HHsearch alignment for GI: 254780272 and conserved domain: PRK10949
>PRK10949 protease 4; Provisional.
Probab=94.41 E-value=0.45 Score=27.21 Aligned_cols=188 Identities=15% Similarity=0.182 Sum_probs=105.1
Q ss_pred HHCCCCCEEEEECCCCCCCCCHHHHHHCCCEEEE--CCCCCHHHHHHHHHHHHHHHHCCCC-CCEEEEEEC-CCCCHHHH
Q ss_conf 6424575797665998401220034514677998--7831898999999999997411576-976999936-87614678
Q gi|254780272|r 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFV--TGQIEDHMATLICAQLLFLEAENPQ-KEISLYINS-PGGVVTAG 89 (216)
Q Consensus 14 ~~~~~~p~~~e~~~~~~~~~Di~s~L~~~Riifl--~g~I~~~~a~~iia~Ll~L~~~~~~-k~I~l~INS-pGG~v~~g 89 (216)
T Consensus 59 L~ldl~G~lvdq~~~----~~p~~~l~~~--~~g~~~~~~~e~~L~Div~aI~~A-a~D~rI~givLdl~~~~g~~~a~l 131 (618)
T PRK10949 59 LLLDISGVIVDKPSS----NNKLRQLGRQ--LLGASSDRLQENSLFDIVNTIRQA-KDDRNITGIVLDLKNFAGADQPSM 131 (618)
T ss_pred EEECCCCEEEECCCC----CCHHHHHHHH--HCCCCCCCCCCCCHHHHHHHHHHH-CCCCCEEEEEEECCCCCCCCHHHH
T ss_conf 998488607616888----8859999998--517887754410299999999985-149982599997777888788999
Q ss_pred HHHHHHHHH---CCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHH--H----------------HHHH
Q ss_conf 999999864---487348998315566520000246777145544156644125666--6----------------5554
Q gi|254780272|r 90 MAIYDTMQF---IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG--F----------------SGQA 148 (216)
Q Consensus 90 laIyD~i~~---i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~--~----------------~G~~ 148 (216)
T Consensus 132 ~eI~~AL~~FK~SGK~V--iAy~d~ysq~~YyLAS~AD-~I~L~P~G~v~l~Gl~~~~~y~K~lLdKlgI~~~vfrvG~Y 208 (618)
T PRK10949 132 QYIGKALREFRDSGKPV--YAVGDNYSQGQYYLASFAN-KIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTY 208 (618)
T ss_pred HHHHHHHHHHHHHCCEE--EEEECCCCCCCEEEEEECC-EEEECCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEECCC
T ss_conf 99999999999819939--9996677853010211077-78988996687866301177899999974982899981375
Q ss_pred ---------HHHH-----HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH----HCC---CCCCCHHHHHHCCCCCEEECC
Q ss_conf ---------1289-----9999999999999999998719998999997----245---858888999975886446045
Q gi|254780272|r 149 ---------SDIE-----RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT----LDR---DHIMSASEACDWGVVDKVLMS 207 (216)
Q Consensus 149 ---------~di~-----~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~----~~r---D~~lsa~EA~eyGliD~Ii~~ 207 (216)
T Consensus 209 KSAvEpf~r~~MS~e~re~~~~~l~~lw~~~~~~Ia~~R~l~~~~l~~~~~~~~~~l~~~~g~~a~~Al~~gLVD~l~~- 287 (618)
T PRK10949 209 KSAVEPFIRDDMSPAAREADSRWIGELWQNYLNTVAANRQITPQQLFPGAQGILEGLTKVGGDTAKYALDNKLVDALAS- 287 (618)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCC-
T ss_conf 6746511144599999999999999999999999998659997897777999999998708840999987699854676-
Q ss_pred CCCCC
Q ss_conf 42251
Q gi|254780272|r 208 RIDIE 212 (216)
Q Consensus 208 ~~e~~ 212 (216)
T Consensus 288 ~~e~~ 292 (618)
T PRK10949 288 SAEIE 292 (618)
T ss_pred HHHHH
T ss_conf 88999