HHsearch alignment for GI: 254780272 and conserved domain: PRK11154

>PRK11154 fadJ multifunctional fatty acid oxidation complex subunit alpha; Reviewed.
Probab=97.25  E-value=0.0044  Score=39.95  Aligned_cols=133  Identities=18%  Similarity=0.273  Sum_probs=84.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCEE-EEEECC-------CCCHH----------------HHHHHHHHHHHCCCCEEE
Q ss_conf             318989999999999974115769769-999368-------76146----------------789999998644873489
Q gi|254780272|r   50 QIEDHMATLICAQLLFLEAENPQKEIS-LYINSP-------GGVVT----------------AGMAIYDTMQFIKPPIST  105 (216)
Q Consensus        50 ~I~~~~a~~iia~Ll~L~~~~~~k~I~-l~INSp-------GG~v~----------------~glaIyD~i~~i~~~V~T  105 (216)
T Consensus        30 al~~~~~~~L~~~l~~~~~---d~~vr~vVl~sg~g~~F~AGaDl~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIA  106 (706)
T PRK11154         30 TLKAEFAEQVRAILKQIKE---DKSLKGVVFISGKPDNFIAGADINMLAACKTAQEAEALARQGQQLFAEIEALPIPVVA  106 (706)
T ss_pred             CCCHHHHHHHHHHHHHHHH---CCCCEEEEEEECCCCEEEECCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf             8999999999999999850---9996699995179980470729776724787577999998889999999809998899


Q ss_pred             EEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHH--HH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
Q ss_conf             9831556652000024677714554415664412566--66----55541289999999999999999999871999899
Q gi|254780272|r  106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GF----SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE  179 (216)
Q Consensus       106 i~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~--~~----~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~  179 (216)
T Consensus       107 AvnG~a~GgG~ElaLacD--~RiAs~~a~~~~g~Pev~lGl~Pg~Ggt-~rL-------pR-----------liG~--~~  163 (706)
T PRK11154        107 AIHGACLGGGLELALACH--YRVCTDDPKTVLGLPEVQLGLLPGSGGT-QRL-------PR-----------LIGV--ST  163 (706)
T ss_pred             EECCEEEHHHHHHHHHCC--EEEECCCCCCCCCCCCCEECCCCCCCCH-HHC-------CH-----------HCCH--HH
T ss_conf             987864189999999689--9996178463213643102778899724-022-------11-----------2389--99


Q ss_pred             HHHHHCCCCCCCHHHHHHCCCCCEEECCC
Q ss_conf             99972458588889999758864460454
Q gi|254780272|r  180 VEKTLDRDHIMSASEACDWGVVDKVLMSR  208 (216)
Q Consensus       180 i~~~~~rD~~lsa~EA~eyGliD~Ii~~~  208 (216)
T Consensus       164 A~eliltG~~i~A~eA~~~GLVd~VVp~~  192 (706)
T PRK11154        164 ALDMILTGKQLRAKQALKLGLVDDVVPQS  192 (706)
T ss_pred             HHHHHHCCCCCCHHHHHHCCCCCEECCCH
T ss_conf             99764007878899999779875515908