HHsearch alignment for GI: 254780272 and conserved domain: pfam01039
>pfam01039 Carboxyl_trans Carboxyl transferase domain. All of the members in this family are biotin dependent carboxylases. The carboxyl transferase domain carries out the following reaction; transcarboxylation from biotin to an acceptor molecule. There are two recognized types of carboxyl transferase. One of them uses acyl-CoA and the other uses 2-oxoacid as the acceptor molecule of carbon dioxide. All of the members in this family utilize acyl-CoA as the acceptor molecule.
Probab=97.65 E-value=0.0027 Score=41.24 Aligned_cols=143 Identities=17% Similarity=0.220 Sum_probs=90.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC----------CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
Q ss_conf 783189899999999999741157697699993687----------6146789999998644873489983155665200
Q gi|254780272|r 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG----------GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117 (216)
Q Consensus 48 ~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpG----------G~v~~glaIyD~i~~i~~~V~Ti~~G~aaS~asl 117 (216)
T Consensus 305 ~G~l~~~aa~Ka-arfi~lcd~-~~iPlv~lvDtpGf~~G~~~E~~G~i~~ga~~~~a~a~~~vP~itvi~rk~~G~~~~ 382 (487)
T pfam01039 305 AGVLFIDSADKA-ARFIRLCDA-FNIPLVILVDVPGFLPGTDQEYGGILKHGAKLLYALAEATVPKITVIPRKAYGGAYV 382 (487)
T ss_pred CCCCCHHHHHHH-HHHHHHHHC-CCCCEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHH
T ss_conf 675304558999-999998633-399769998489887788999746899999999999855898899997876455766
Q ss_pred CCCCCC--CCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH-----HHHHHHHCCCCCC
Q ss_conf 002467--771455441566441256666555412899999999999999999998719998-----9999972458588
Q gi|254780272|r 118 LLSAGE--KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY-----EEVEKTLDRDHIM 190 (216)
Q Consensus 118 Il~aG~--~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~-----e~i~~~~~rD~~l 190 (216)
T Consensus 383 am~g~~~~~d~~~awP~a~~~vm~~egav~-----i-~~~~~~~~a~---------~~~~~~~~~~~~~~~~~--~~~~~ 445 (487)
T pfam01039 383 VMDSKINGADAVAAWPTARIAVMGPEGAVE-----I-KFRKELAAAT---------MRYKDLEALRAQKIAEY--EEQLS 445 (487)
T ss_pred HHCCCCCCCCEEEECCCCCEECCCHHHHHH-----H-HHHHHHHHCC---------CCCCCHHHHHHHHHHHH--HHHHC
T ss_conf 415656788779997988362379999999-----9-8788886443---------46869899999999999--98619
Q ss_pred CHHHHHHCCCCCEEECCCC
Q ss_conf 8899997588644604542
Q gi|254780272|r 191 SASEACDWGVVDKVLMSRI 209 (216)
Q Consensus 191 sa~EA~eyGliD~Ii~~~~ 209 (216)
T Consensus 446 ~~~~~a~~~~vD~vIdP~~ 464 (487)
T pfam01039 446 PPYVAAARGFADLVIDPGR 464 (487)
T ss_pred CHHHHHHHCCCCCCCCHHH
T ss_conf 9999987067587188899