HHsearch results for GI: 254780272 and protein with PDBid: 1ef8_A

>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=97.43  E-value=0.00025  Score=46.37  Aligned_cols=137  Identities=13%  Similarity=0.183  Sum_probs=85.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE-C-------CCCCHH--------------HHHHHHHHHHHCCCCEEEEE
Q ss_conf             3189899999999999741157697699993-6-------876146--------------78999999864487348998
Q gi|254780272|r   50 QIEDHMATLICAQLLFLEAENPQKEISLYIN-S-------PGGVVT--------------AGMAIYDTMQFIKPPISTFC  107 (216)
Q Consensus        50 ~I~~~~a~~iia~Ll~L~~~~~~k~I~l~IN-S-------pGG~v~--------------~glaIyD~i~~i~~~V~Ti~  107 (216)
                      .++.++-..+..-|..++  +++ -..+.|- +       -|+|+.              ....+++.|..++.||...+
T Consensus        27 al~~~~~~~L~~al~~~~--~~~-~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav  103 (261)
T 1ef8_A           27 ALSKVFIDDLMQALSDLN--RPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMV  103 (261)
T ss_dssp             CCCHHHHHHHHHHHHHTC--STT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEE
T ss_pred             CCCHHHHHHHHHHHHHHH--CCC-CEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf             999999999999999973--799-87999971489974766877113434674302466999999999997799889997


Q ss_pred             ECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf             31556652000024677714554415664412566665554128999999999999999999987199989999972458
Q gi|254780272|r  108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD  187 (216)
Q Consensus       108 ~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD  187 (216)
                      -|.|.+.|..|.++++  .|++.+++++-.-.+.-|......-.    ..           +.+..|  .....+.+-..
T Consensus       104 ~G~a~GgG~~lala~D--~ria~~~a~f~~pe~~~G~~~~~g~~----~~-----------l~~~~G--~~~a~~~~l~g  164 (261)
T 1ef8_A          104 EGSVWGGAFEMIMSSD--LIIAASTSTFSMTPVNLGVPYNLVGI----HN-----------LTRDAG--FHIVKELIFTA  164 (261)
T ss_dssp             CSEEETHHHHHHHHSS--EEEEETTCEEECCHHHHTCCCCHHHH----HT-----------TSSSSC--HHHHHHHHHHC
T ss_pred             CCEEEEEEEHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCH----HH-----------HHHHHC--CHHHHHHHHCC
T ss_conf             7488640102445344--40000001235840001235564203----24-----------467717--36789999809


Q ss_pred             CCCCHHHHHHCCCCCEEECCC
Q ss_conf             588889999758864460454
Q gi|254780272|r  188 HIMSASEACDWGVVDKVLMSR  208 (216)
Q Consensus       188 ~~lsa~EA~eyGliD~Ii~~~  208 (216)
                      ..++|+||.++||||+|+...
T Consensus       165 ~~~~a~eA~~~Glv~~v~~~~  185 (261)
T 1ef8_A          165 SPITAQRALAVGILNHVVEVE  185 (261)
T ss_dssp             CCEEHHHHHHTTSCSEEECHH
T ss_pred             CEECHHHHHHCCCCCEECCCH
T ss_conf             844599999759922756804