HHsearch results for GI: 254780272 and protein with PDBid: 1ef8_A
>1ef8_A Methylmalonyl COA decarboxylase; lyase; 1.85A {Escherichia coli} SCOP: c.14.1.3 PDB: 1ef9_A*
Probab=97.43 E-value=0.00025 Score=46.37 Aligned_cols=137 Identities=13% Similarity=0.183 Sum_probs=85.8
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEE-C-------CCCCHH--------------HHHHHHHHHHHCCCCEEEEE
Q ss_conf 3189899999999999741157697699993-6-------876146--------------78999999864487348998
Q gi|254780272|r 50 QIEDHMATLICAQLLFLEAENPQKEISLYIN-S-------PGGVVT--------------AGMAIYDTMQFIKPPISTFC 107 (216)
Q Consensus 50 ~I~~~~a~~iia~Ll~L~~~~~~k~I~l~IN-S-------pGG~v~--------------~glaIyD~i~~i~~~V~Ti~ 107 (216)
.++.++-..+..-|..++ +++ -..+.|- + -|+|+. ....+++.|..++.||...+
T Consensus 27 al~~~~~~~L~~al~~~~--~~~-~~~vVl~g~~~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav 103 (261)
T 1ef8_A 27 ALSKVFIDDLMQALSDLN--RPE-IRCIILRAPSGSKVFSAGHDIHELPSGGRDPLSYDDPLRQITRMIQKFPKPIISMV 103 (261)
T ss_dssp CCCHHHHHHHHHHHHHTC--STT-CCEEEEECCTTCSEEECCSCSTTC-----CTTCTTSHHHHHHHHHHHCSSCEEEEE
T ss_pred CCCHHHHHHHHHHHHHHH--CCC-CEEEEEEECCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 999999999999999973--799-87999971489974766877113434674302466999999999997799889997
Q ss_pred ECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCC
Q ss_conf 31556652000024677714554415664412566665554128999999999999999999987199989999972458
Q gi|254780272|r 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187 (216)
Q Consensus 108 ~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD 187 (216)
-|.|.+.|..|.++++ .|++.+++++-.-.+.-|......-. .. +.+..| .....+.+-..
T Consensus 104 ~G~a~GgG~~lala~D--~ria~~~a~f~~pe~~~G~~~~~g~~----~~-----------l~~~~G--~~~a~~~~l~g 164 (261)
T 1ef8_A 104 EGSVWGGAFEMIMSSD--LIIAASTSTFSMTPVNLGVPYNLVGI----HN-----------LTRDAG--FHIVKELIFTA 164 (261)
T ss_dssp CSEEETHHHHHHHHSS--EEEEETTCEEECCHHHHTCCCCHHHH----HT-----------TSSSSC--HHHHHHHHHHC
T ss_pred CCEEEEEEEHHHHHHH--HCCCCCCCCCCCCCCCCCCCCCCCCH----HH-----------HHHHHC--CHHHHHHHHCC
T ss_conf 7488640102445344--40000001235840001235564203----24-----------467717--36789999809
Q ss_pred CCCCHHHHHHCCCCCEEECCC
Q ss_conf 588889999758864460454
Q gi|254780272|r 188 HIMSASEACDWGVVDKVLMSR 208 (216)
Q Consensus 188 ~~lsa~EA~eyGliD~Ii~~~ 208 (216)
..++|+||.++||||+|+...
T Consensus 165 ~~~~a~eA~~~Glv~~v~~~~ 185 (261)
T 1ef8_A 165 SPITAQRALAVGILNHVVEVE 185 (261)
T ss_dssp CCEEHHHHHHTTSCSEEECHH
T ss_pred CEECHHHHHHCCCCCEECCCH
T ss_conf 844599999759922756804