HHsearch results for GI: 254780272 and protein with PDBid: 1on3_A
>1on3_A Methylmalonyl-COA carboxyltransferase 12S subunit; domain duplication, multienzyme complex, transcarboxylase; HET: MCA; 1.90A {Propionibacterium freudenreichii} SCOP: c.14.1.4 c.14.1.4 PDB: 1on9_A*
Probab=98.02 E-value=0.00013 Score=48.24 Aligned_cols=143 Identities=17% Similarity=0.242 Sum_probs=93.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCC----------CCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCC
Q ss_conf 783189899999999999741157697699993687----------6146789999998644873489983155665200
Q gi|254780272|r 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG----------GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117 (216)
Q Consensus 48 ~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpG----------G~v~~glaIyD~i~~i~~~V~Ti~~G~aaS~asl 117 (216)
+|.++.+.+.....-+..-++. +-||-.++|.|| |-+..|-.+.+++...+.|..|+.+|.+++.|.+
T Consensus 339 ~G~l~~~~a~Kaarfi~lcd~~--~iPlv~lvD~pGf~~G~~~E~~Gi~~~gA~~~~A~a~a~vP~isvi~~k~~G~g~~ 416 (523)
T 1on3_A 339 SGCLDINASDKAAEFVNFCDSF--NIPLVQLVDVPGFLPGVQQEYGGIIRHGAKMLYAYSEATVPKITVVLRKAYGGSYL 416 (523)
T ss_dssp GGCBCHHHHHHHHHHHHHHHHT--TCCEEEEEEECCBCCCHHHHHTTHHHHHHHHHHHHHHCCSCEEEEEEEEEEHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHC--CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHH
T ss_conf 6888706789999999988742--87789994278767778999976999999999985367998799985774450231
Q ss_pred CCCCCC--CCCEEECCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHH
Q ss_conf 002467--7714554415664412566665554-1289999999999999999999871999899999724585888899
Q gi|254780272|r 118 LLSAGE--KGMRFALPNARILLHQPSGGFSGQA-SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194 (216)
Q Consensus 118 Il~aG~--~g~R~~~pns~iMiHqps~~~~G~~-~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~lsa~E 194 (216)
-+++.. ....|+.|++++-.=.|.+.+.=-. .+++ .++.-+..+. +++++. .+.+.+|-.
T Consensus 417 am~~~~~~~d~~~AwP~a~~~vm~pegaa~i~~r~~~~-a~~~~~~~~~--------------~~~~~~--~~~~~~~~~ 479 (523)
T 1on3_A 417 AMCNRDLGADAVYAWPSAEIAVMGAEGAANVIFRKEIK-AADDPDAMRA--------------EKIEEY--QNAFNTPYV 479 (523)
T ss_dssp TTTCGGGTCSEEEECTTCEEESSCHHHHHHHHTHHHHH-HSSCHHHHHH--------------HHHHHH--HHHHSSHHH
T ss_pred CCCCCCCCCCEEEECCCCEEEECCHHHHHHHHHCCCCC-CCCCHHHHHH--------------HHHHHH--HHHHCCHHH
T ss_conf 24677788787998675559845999999987412101-7679899999--------------999999--987579999
Q ss_pred HHHCCCCCEEECCCC
Q ss_conf 997588644604542
Q gi|254780272|r 195 ACDWGVVDKVLMSRI 209 (216)
Q Consensus 195 A~eyGliD~Ii~~~~ 209 (216)
|.+.|+||+||+++.
T Consensus 480 aa~~g~iD~VIdP~~ 494 (523)
T 1on3_A 480 AAARGQVDDVIDPAD 494 (523)
T ss_dssp HHHTTSSSEECCGGG
T ss_pred HHHCCCCCEEECHHH
T ss_conf 986678884288799