HHsearch results for GI: 254780272 and protein with PDBid: 1q52_A

>1q52_A MENB; lyase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.14.1.3 PDB: 1q51_A 1rjm_A* 1rjn_A*
Probab=97.78  E-value=0.00024  Score=46.52  Aligned_cols=170  Identities=15%  Similarity=0.183  Sum_probs=98.1

Q ss_pred             CCCCEEEEECCCCCCCCCH-HHHHHCCCEEE--ECC-----CCCHHHHHHHHHHHHHHHHCCCCCCEEEEE-E-------
Q ss_conf             4575797665998401220-03451467799--878-----318989999999999974115769769999-3-------
Q gi|254780272|r   17 GLVPMVVEQTNRGERSYDI-YSRLLKERIVF--VTG-----QIEDHMATLICAQLLFLEAENPQKEISLYI-N-------   80 (216)
Q Consensus        17 ~~~p~~~e~~~~~~~~~Di-~s~L~~~Riif--l~g-----~I~~~~a~~iia~Ll~L~~~~~~k~I~l~I-N-------   80 (216)
                      |..|......+.-++..|| |.+-..+.|.-  |+-     .++.++...+...|..++.. +  ++.+.| .       
T Consensus        19 p~~~~~~~~~~~~~~~~di~~~~~~ddgVa~ItLNrP~~~NAl~~~m~~eL~~al~~~~~d-~--~vrvvVltG~~~~~~   95 (314)
T 1q52_A           19 PFDAKAWRLVDGFDDLTDITYHRHVDDATVRVAFNRPEVRNAFRPHTVDELYRVLDHARMS-P--DVGVVLLTGNGPSPK   95 (314)
T ss_dssp             CCCGGGEEECTTCTTCSSEEEEEESSSSEEEEEECCGGGTTCCCHHHHHHHHHHHHHHHHC-T--TCCEEEEEECCCCTT
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHC-C--CCCEEEEECCCCCCC
T ss_conf             9982004225777877516999973399899995587756898999999999999999749-9--975899957887665


Q ss_pred             ------CCCCCHHH--------------------------HHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCEE
Q ss_conf             ------68761467--------------------------8999999864487348998315566520000246777145
Q gi|254780272|r   81 ------SPGGVVTA--------------------------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF  128 (216)
Q Consensus        81 ------SpGG~v~~--------------------------glaIyD~i~~i~~~V~Ti~~G~aaS~aslIl~aG~~g~R~  128 (216)
                            |.|+++..                          ...+++.|..++.||...+-|.|.+.|..|.++++  .|+
T Consensus        96 sgG~~FcaG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~kPvIaav~G~a~GgG~~lalacD--~~i  173 (314)
T 1q52_A           96 DGGWAFCSGGDQRIRGRSGYQYASGDTADTVDVARAGRLHILEVQRLIRFMPKVVICLVNGWAAGGGHSLHVVCD--LTL  173 (314)
T ss_dssp             TCCCEEECCC-----------------------------CHHHHHHHHHHSSSEEEEEECSEEETHHHHHHHHSS--EEE
T ss_pred             CCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECHHHHHHHCC--CHH
T ss_conf             521023347675665312444333342012667888889999999999858998899983766102138876123--112


Q ss_pred             ECCCH-HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHCCCCCEE
Q ss_conf             54415-66441256666---555412899999999999999999998719998999997245858888999975886446
Q gi|254780272|r  129 ALPNA-RILLHQPSGGF---SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV  204 (216)
Q Consensus       129 ~~pns-~iMiHqps~~~---~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~lsa~EA~eyGliD~I  204 (216)
                      +.+++ ++-+-....|.   .|-..-+                  .+..|.  ....+.+-.-..++|+||+++||||+|
T Consensus       174 as~~a~~f~~pe~~lGl~p~~g~~~~L------------------~~~vG~--~~A~~llltg~~i~a~eA~~~Glv~~v  233 (314)
T 1q52_A          174 ASREYARFKQTDADVGSFDGGYGSAYL------------------ARQVGQ--KFAREIFFLGRTYTAEQMHQMGAVNAV  233 (314)
T ss_dssp             EETTTCEEECCGGGGTCCCCSTTTHHH------------------HHHHCH--HHHHHHHHHCCEECHHHHHHHTSCSEE
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCHHHHH------------------HHHHHH--HHHHHHHHHCCCCCHHHHHCCCCEEEE
T ss_conf             100377766444045878885069999------------------998569--999999985898888897307832796


Q ss_pred             ECCCCCCC
Q ss_conf             04542251
Q gi|254780272|r  205 LMSRIDIE  212 (216)
Q Consensus       205 i~~~~e~~  212 (216)
                      +.. .++.
T Consensus       234 v~~-~el~  240 (314)
T 1q52_A          234 AEH-AELE  240 (314)
T ss_dssp             ECG-GGHH
T ss_pred             CCH-HHHH
T ss_conf             387-8999