HHsearch results for GI: 254780272 and protein with PDBid: 2fbm_A
>2fbm_A Y chromosome chromodomain protein 1, telomeric isoform B; acetyltransferase, structural genomics, structural genomics consortium, SGC; 2.28A {Homo sapiens} SCOP: c.14.1.3
Probab=97.94 E-value=7.3e-05 Score=49.81 Aligned_cols=141 Identities=19% Similarity=0.212 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECC------CCCHHH-------------------HHHHHHHHHHCCCCEE
Q ss_conf 318989999999999974115769769999368------761467-------------------8999999864487348
Q gi|254780272|r 50 QIEDHMATLICAQLLFLEAENPQKEISLYINSP------GGVVTA-------------------GMAIYDTMQFIKPPIS 104 (216)
Q Consensus 50 ~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSp------GG~v~~-------------------glaIyD~i~~i~~~V~ 104 (216)
.++.++-..+...|..++.. +.+ .+.|.+. |+++.. ...++..|..++.||.
T Consensus 47 al~~~~~~eL~~al~~~~~d-~~~--~vVltg~g~~F~aG~Dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~kPvI 123 (291)
T 2fbm_A 47 ALNTEVIKEIVNALNSAAAD-DSK--LVLFSAAGSVFCCGLDFGYFVKHLRNNRNTASLEMVDTIKNFVNTFIQFKKPIV 123 (291)
T ss_dssp CBCHHHHHHHHHHHHHHHHS-SCS--EEEEEECSSCSBCCBCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCSCEE
T ss_pred CCCHHHHHHHHHHHHHHHHC-CCE--EEEEECCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 98999999999999998739-987--999978899567488755453222232102379999999999999986799899
Q ss_pred EEEECCCCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
Q ss_conf 99831556652000024677714554415664412566665554128999999999999999999987199989999972
Q gi|254780272|r 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184 (216)
Q Consensus 105 Ti~~G~aaS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~ 184 (216)
..+-|.|.+.|+.|+++++ .|++.++++|-+-....|..-...-. . .+.+ .-|. ....+.+
T Consensus 124 Aav~G~a~GgG~~lal~cD--~ria~~~a~f~~pe~~~Gi~p~~~~~----~---~l~r--------~iG~--~~a~~ll 184 (291)
T 2fbm_A 124 VSVNGPAIGLGASILPLCD--LVWANEKAWFQTPYTTFGQSPDGCSS----I---TFPK--------MMGK--ASANEML 184 (291)
T ss_dssp EEECSCEETHHHHTGGGSS--EEEEETTCEEECCHHHHTCCCCTTHH----H---HHHH--------HHCH--HHHHHHH
T ss_pred EEECCEECCCCCCEEECCC--EECCCHHHHHHHHHCEECCCCCCCCC----C---CHHH--------HCCH--HHHHHHH
T ss_conf 9979910318873002356--53014433323112000653465443----1---0045--------5045--6887999
Q ss_pred CCCCCCCHHHHHHCCCCCEEECCCCCCCC
Q ss_conf 45858888999975886446045422510
Q gi|254780272|r 185 DRDHIMSASEACDWGVVDKVLMSRIDIEE 213 (216)
Q Consensus 185 ~rD~~lsa~EA~eyGliD~Ii~~~~e~~~ 213 (216)
-.-..++|+||+++||||+|+.. .++.+
T Consensus 185 ltg~~~~a~eA~~~Glv~~vv~~-~~l~~ 212 (291)
T 2fbm_A 185 IAGRKLTAREACAKGLVSQVFLT-GTFTQ 212 (291)
T ss_dssp TSCCEEEHHHHHHTTSCSEEECS-TTSHH
T ss_pred HCCCCCCHHHHHHCCCCCEEECH-HHHHH
T ss_conf 80872459999984993087082-68999