HHsearch results for GI: 254780272 and protein with PDBid: 3bpp_A
>3bpp_A 1510-N membrane protease; specific for A stomatin homolog, archaea, thermostable, catalytic DYAD, hydrolase; 2.30A {Pyrococcus horikoshii} PDB: 2deo_A
Probab=99.93 E-value=6.3e-26 Score=182.82 Aligned_cols=170 Identities=22% Similarity=0.308 Sum_probs=143.3
Q ss_pred HHHCCCEEE---ECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEE---CCC
Q ss_conf 451467799---87831898999999999997411576976999936876146789999998644873489983---155
Q gi|254780272|r 38 RLLKERIVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQA 111 (216)
Q Consensus 38 ~L~~~Riif---l~g~I~~~~a~~iia~Ll~L~~~~~~k~I~l~INSpGG~v~~glaIyD~i~~i~~~V~Ti~~---G~a 111 (216)
..+.+++|+ +.|+|+...++.+..+|..++.+ +-+.|.|.||||||++.++..|+|.|+.++.|+.+++. |.|
T Consensus 3 ~~~~~~~V~vi~i~G~I~~~~~~~i~~~l~~a~~~-~~kaivL~IdSPGG~v~~~~~I~~~i~~~~~~v~~~v~~~~~~A 81 (230)
T 3bpp_A 3 PILAKNIVYVAQIKGQITSYTYDQFDRYITIAEQD-NAEAIIIELDTPGGRADAMMNIVQRIQQSKIPVIIYVYPPGASA 81 (230)
T ss_dssp ---CCSEEEEEEEESSBCHHHHHHHHHHHHHHHHT-TCSEEEEEEEBSCBCHHHHHHHHHHHHTCSSCEEEEECSTTCEE
T ss_pred CCCCCCEEEEEEEEEEECHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHH
T ss_conf 55578979999987688869999999999999768-99869999859881899999999998604678857999734467
Q ss_pred CCCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCC
Q ss_conf 66520000246777145544156644125666655541289999999999999999999871999899999724585888
Q gi|254780272|r 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191 (216)
Q Consensus 112 aS~aslIl~aG~~g~R~~~pns~iMiHqps~~~~G~~~di~~~a~el~~~~~~l~~i~a~~Tg~~~e~i~~~~~rD~~ls 191 (216)
+|+|.+|+++|+ ++++.|+|.++.|+|..+..++....+...+....++..+ +.+++.+|++.+.+++.+.+++|++
T Consensus 82 aS~g~~ia~a~d--~i~~~p~s~iGs~gv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~a~~~g~~~~~~~~~v~~~~~~~ 158 (230)
T 3bpp_A 82 ASAGTYIALGSH--LIAMAPGTSIGACRPILGYSQNGSIIEAPPAITNYFIAYI-KSLAQESGRNATIAEEFITKDLSLT 158 (230)
T ss_dssp ETHHHHHHHTSS--EEEECTTCEEECCCCEEECCSSSCCEECCHHHHHHHHHHH-HHHHHHHTSCHHHHHHHHHTCCEEC
T ss_pred HHHHHHHHHCCC--EEEECCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHHHHHHCCCCCC
T ss_conf 777899885089--8997899817564542357885026777888899999999-9999993949999998876687864
Q ss_pred HHHHHHCCCCCEEECCCCCC
Q ss_conf 89999758864460454225
Q gi|254780272|r 192 ASEACDWGVVDKVLMSRIDI 211 (216)
Q Consensus 192 a~EA~eyGliD~Ii~~~~e~ 211 (216)
++||+++|++|.|..+..++
T Consensus 159 ~~eA~~~GlvD~i~~~~~~l 178 (230)
T 3bpp_A 159 PEEALKYGVIEVVARDINEL 178 (230)
T ss_dssp HHHHHHTTSCSEECSSHHHH
T ss_pred HHHHHHCCCCCEECCCHHHH
T ss_conf 99999819730023899999