BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780272|ref|YP_003064685.1| ATP-dependent Clp protease
proteolytic subunit [Candidatus Liberibacter asiaticus str. psy62]
(216 letters)
Database: nr
13,984,884 sequences; 4,792,584,752 total letters
Searching..................................................done
>gi|83311891|ref|YP_422155.1| protease subunit of ATP-dependent Clp protease [Magnetospirillum
magneticum AMB-1]
gi|82946732|dbj|BAE51596.1| Protease subunit of ATP-dependent Clp protease [Magnetospirillum
magneticum AMB-1]
Length = 244
Score = 259 bits (661), Expect = 3e-67, Method: Composition-based stats.
Identities = 130/213 (61%), Positives = 177/213 (83%), Gaps = 1/213 (0%)
Query: 4 EGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
++D D+++ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TGQ+ D +A+LICAQ
Sbjct: 30 RNMRERDPIDLYMNTLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVYDEVASLICAQ 89
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+ENP K+I+ YINSPGGVVT+G+AIYDTMQ+I+P +ST C+GQAASMGSLL++AG
Sbjct: 90 LLFLESENPSKDIAFYINSPGGVVTSGLAIYDTMQYIRPKVSTVCIGQAASMGSLLMTAG 149
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
EKG RF+LPN+RI++HQPSGG GQA+DIE A++I+ ++ RLN IYV++ G+ + +EK
Sbjct: 150 EKGKRFSLPNSRIMVHQPSGGAQGQATDIEIQAREILALRARLNNIYVEHTGQPLDVIEK 209
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
++RD M+A EA ++G++D+V+ R +E+ S
Sbjct: 210 VMERDKFMTADEAKEFGLIDEVVNKRPAVEDDS 242
>gi|119898362|ref|YP_933575.1| ATP-dependent Clp protease proteolytic subunit [Azoarcus sp. BH72]
gi|166201798|sp|A1K783|CLPP_AZOSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119670775|emb|CAL94688.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 212
Score = 257 bits (657), Expect = 7e-67, Method: Composition-based stats.
Identities = 130/196 (66%), Positives = 161/196 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGL+PMVVEQ+ RGERSYDIYSRLLKER+VF+ G + D A LI AQLLFLE+ENP K+I
Sbjct: 17 LGLIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFLESENPDKDI 76
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG+AIYDTMQFIKP +ST C+GQAASMG+ LL+AGEKG RF LPN+R+
Sbjct: 77 YFYINSPGGSVTAGLAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGKRFCLPNSRV 136
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ ++ RLN + K+ G+T E++EK DRD+ MSA+ A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILYLRERLNGMLAKHTGQTIEQIEKDTDRDNFMSATAA 196
Query: 196 CDWGVVDKVLMSRIDI 211
++G+VDKVL SR D
Sbjct: 197 VEYGLVDKVLTSRADT 212
>gi|225627583|ref|ZP_03785620.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str.
Cudo]
gi|237815533|ref|ZP_04594530.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
str. 2308 A]
gi|225617588|gb|EEH14633.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti str.
Cudo]
gi|237788831|gb|EEP63042.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
str. 2308 A]
Length = 247
Score = 255 bits (652), Expect = 3e-66, Method: Composition-based stats.
Identities = 148/216 (68%), Positives = 186/216 (86%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ ++ +D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+C
Sbjct: 32 LIYQRPIMRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVC 91
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+
Sbjct: 92 AQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLT 151
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +
Sbjct: 152 AGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTI 211
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
E+TLDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 212 ERTLDRDHFMTAQEALEFGLIDKVVEARDVSADESK 247
>gi|56478265|ref|YP_159854.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
gi|67460188|sp|Q5P161|CLPP_AZOSE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56314308|emb|CAI08953.1| ATP-dependent Clp protease proteolytic subunit [Aromatoleum
aromaticum EbN1]
Length = 212
Score = 254 bits (649), Expect = 6e-66, Method: Composition-based stats.
Identities = 127/195 (65%), Positives = 161/195 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G + D A LI AQLLFLE+ENP K++
Sbjct: 17 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLIVAQLLFLESENPDKDV 76
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V++GMAIYDTMQFIKP +ST C+GQAASMGS LL+AGEKG RF LPN+R+
Sbjct: 77 YFYINSPGGSVSSGMAIYDTMQFIKPSVSTLCIGQAASMGSFLLAAGEKGKRFCLPNSRV 136
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ I+ +LNE+ K+ G+ E++EK DRD MSA++A
Sbjct: 137 MIHQPLGGFQGQASDIEIHAREILGIRAKLNEMLAKHTGQPIEQIEKDTDRDRFMSAADA 196
Query: 196 CDWGVVDKVLMSRID 210
++G+VDKVL +R D
Sbjct: 197 VEYGIVDKVLTNRAD 211
>gi|254780272|ref|YP_003064685.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter asiaticus str. psy62]
gi|254039949|gb|ACT56745.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter asiaticus str. psy62]
Length = 216
Score = 254 bits (648), Expect = 7e-66, Method: Composition-based stats.
Identities = 216/216 (100%), Positives = 216/216 (100%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC
Sbjct: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS
Sbjct: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV
Sbjct: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK
Sbjct: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
>gi|23014984|ref|ZP_00054776.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Magnetospirillum magnetotacticum MS-1]
Length = 213
Score = 253 bits (647), Expect = 9e-66, Method: Composition-based stats.
Identities = 134/211 (63%), Positives = 175/211 (82%), Gaps = 1/211 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
++D DV++ LVPMVVEQTNRGERSYDIYSRLLKERIVF+TGQ+ D +A+LICAQLL
Sbjct: 1 MRERDPIDVYMNTLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVYDEVASLICAQLL 60
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FLE+ENP K+IS YINSPGGVVT+G+AIYDTMQ+I+P +ST C+GQAASMGSLL++AGEK
Sbjct: 61 FLESENPSKDISFYINSPGGVVTSGLAIYDTMQYIRPAVSTLCIGQAASMGSLLMTAGEK 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RF+LPN+RI++HQPSGG GQA+DIE A++I+ ++ RLN IYV + G+ E +EK +
Sbjct: 121 GKRFSLPNSRIMVHQPSGGAQGQATDIEIQAREILALRARLNNIYVDHTGQPLEVIEKVM 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+RD M+A EA ++G++D+V+ R E+ S
Sbjct: 181 ERDKFMTAEEAKEFGLIDEVVNKRPVAEDDS 211
>gi|225175200|ref|ZP_03729196.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
gi|225169376|gb|EEG78174.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dethiobacter
alkaliphilus AHT 1]
Length = 193
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 116/193 (60%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGER+YDIYSRLLK+RI+F+ I+D++A L+ AQLLFLE+E+P+K+I
Sbjct: 1 MNLVPMVVEQTNRGERAYDIYSRLLKDRIIFIGSPIDDNVANLVIAQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++Y+NSPGG V AG+AIYDTMQ+IKP +ST C+G AASMG++LL+AG G RF+LPN+RI
Sbjct: 61 NIYVNSPGGSVYAGLAIYDTMQYIKPDVSTICVGLAASMGAVLLAAGADGKRFSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE HA++I++I+ RLNEI + GK E++ + DRD+ MSA +A
Sbjct: 121 MVHQPLGGAQGQAVDIEIHAKEILRIRERLNEILSGHTGKPVEQIARDTDRDYFMSAEQA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D VL R
Sbjct: 181 KEYGLIDGVLEKR 193
>gi|27380055|ref|NP_771584.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
gi|67460543|sp|Q89KG1|CLPP2_BRAJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|27353209|dbj|BAC50209.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
Length = 211
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 138/209 (66%), Positives = 180/209 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED M+TL+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKTIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++A++A ++G+VD+V+ R + +K
Sbjct: 181 KFLTANDAKEFGLVDRVIDKRAEEPAAAK 209
>gi|296536161|ref|ZP_06898289.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
gi|296263532|gb|EFH10029.1| endopeptidase Clp [Roseomonas cervicalis ATCC 49957]
Length = 213
Score = 253 bits (646), Expect = 1e-65, Method: Composition-based stats.
Identities = 125/211 (59%), Positives = 174/211 (82%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+D +++ LVPMV+EQT RGER++DIYSRLLKERI+F+TG + D M++LICAQLLF
Sbjct: 1 MRDRDPVELYNNLVPMVIEQTARGERAFDIYSRLLKERIIFLTGPVYDQMSSLICAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+I+ YINSPGGVV+AG+A+YDTMQ+I+ P+ST C+G AASMGSLLL+AG KG
Sbjct: 61 LESENPNKDIAFYINSPGGVVSAGLAMYDTMQYIRAPVSTVCLGMAASMGSLLLTAGAKG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RFALPN+RI++HQPSGG GQA+DIE A++I+ +++RLN+IYVK+ G+ EE+E+ L+
Sbjct: 121 KRFALPNSRIMVHQPSGGAQGQATDIEIQAREILALRKRLNQIYVKHTGQPIEEIERKLE 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
RD MSA EA ++G++D+V++ R +++
Sbjct: 181 RDSYMSAEEAKEFGLIDEVVLERPTTPAEAQ 211
>gi|157369338|ref|YP_001477327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
gi|157321102|gb|ABV40199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
proteamaculans 568]
Length = 207
Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAE+P+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAESPEKDIFLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G+T E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQTLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD M+A EA ++G+VD +L R
Sbjct: 179 ERDTERDRFMTAEEAVEYGLVDGILTHRK 207
>gi|319784104|ref|YP_004143580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317169992|gb|ADV13530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 209
Score = 253 bits (645), Expect = 2e-65, Method: Composition-based stats.
Identities = 154/205 (75%), Positives = 183/205 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED MATL+CAQLLFLE
Sbjct: 1 MKNPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA DI+K+KRRLNE+YVK+ GK+YEE+EKTLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHALDIIKLKRRLNEVYVKHTGKSYEEIEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M+A EA D+G++DKV+ SR E
Sbjct: 181 HFMTADEAKDFGLIDKVISSREAAE 205
>gi|74317695|ref|YP_315435.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiobacillus
denitrificans ATCC 25259]
gi|90183186|sp|Q3SI98|CLPP_THIDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74057190|gb|AAZ97630.1| peptidase S14, ClpP [Thiobacillus denitrificans ATCC 25259]
Length = 212
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 123/203 (60%), Positives = 161/203 (79%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E LGLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G + D A LI AQ+LFLE
Sbjct: 7 RTAPEPQGLGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDATANLIVAQMLFLE 66
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+I LYINSPGG V+AG+AIYDTMQFIKP +ST C+GQAASMG+ LL+AG KG R
Sbjct: 67 SENPDKDIYLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGAKGKR 126
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ LPN+R+++HQP GGF GQASDIE HA++I+ +K RLN + K+ G++ E +++ DRD
Sbjct: 127 YCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKARLNGMLAKHTGQSLEVIDRDTDRD 186
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
+ MSA ++ +G+VDKVL SR +
Sbjct: 187 NFMSAEDSVKYGLVDKVLTSRNE 209
>gi|91787906|ref|YP_548858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. JS666]
gi|91697131|gb|ABE43960.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
sp. JS666]
Length = 218
Score = 252 bits (644), Expect = 2e-65, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 160/208 (76%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
++ G + LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G + D A L+ A
Sbjct: 11 AYAGPQAGAQDAQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVA 70
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C+G AASMG+ LLSA
Sbjct: 71 QLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSA 130
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RF+LPN+R+++HQPSGG GQA+DIE HA+DI+K + +LN I N G+ E++E
Sbjct: 131 GAKGKRFSLPNSRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAANTGQPIEKIE 190
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ +RD+ + A +A ++G+VD+V+ R
Sbjct: 191 RDTERDYFLFAEDAKEYGLVDQVISRRP 218
>gi|148558952|ref|YP_001259031.1| ATP-dependent Clp protease proteolytic subunit [Brucella ovis ATCC
25840]
gi|297248424|ref|ZP_06932142.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv.
5 str. B3196]
gi|148370209|gb|ABQ60188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella ovis
ATCC 25840]
gi|297175593|gb|EFH34940.1| ATP-dependent Clp protease, protease subunit [Brucella abortus bv.
5 str. B3196]
Length = 228
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 148/216 (68%), Positives = 186/216 (86%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ ++ +D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+C
Sbjct: 13 LIYQRPIMRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVC 72
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+
Sbjct: 73 AQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLT 132
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +
Sbjct: 133 AGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTI 192
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
E+TLDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 193 ERTLDRDHFMTAQEALEFGLIDKVVEARDVSADESK 228
>gi|13476994|ref|NP_108564.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium loti
MAFF303099]
gi|18202642|sp|Q982V6|CLPP2_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|14027757|dbj|BAB54350.1| ATP-dependent Clp proteinase [Mesorhizobium loti MAFF303099]
Length = 209
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 154/207 (74%), Positives = 183/207 (88%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED MATL+CAQLLFLE
Sbjct: 1 MKNPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA DIVK+KRRLNE+YVK+ GK+YEE+E+TLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHAMDIVKLKRRLNEVYVKHTGKSYEEIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
H M+A EA D+G++DKV+ SR E
Sbjct: 181 HFMTADEAKDFGLIDKVISSREPAESA 207
>gi|237653230|ref|YP_002889544.1| ATP-dependent Clp protease proteolytic subunit [Thauera sp. MZ1T]
gi|237624477|gb|ACR01167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thauera sp.
MZ1T]
Length = 212
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 132/205 (64%), Positives = 162/205 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D V LGLVPMVVEQ+ RGER+YDIYSRLLKER+VF+ G + D A LI AQLLFL
Sbjct: 8 HSSDWNPVGLGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLIVAQLLFL 67
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+AGEKG
Sbjct: 68 ESENPDKDIYFYINSPGGSVTAGMAIYDTMQFIKPNVSTLCIGQAASMGAFLLAAGEKGK 127
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF LPN+R+++HQP GGF GQASDIE HA++I+ ++ RLN++ K+ G+ E +EK DR
Sbjct: 128 RFILPNSRVMIHQPLGGFQGQASDIEIHAREILYLRSRLNDMLSKHTGQALERIEKDTDR 187
Query: 187 DHIMSASEACDWGVVDKVLMSRIDI 211
D+ MSA+ A ++G+VDKVL SR D
Sbjct: 188 DNFMSATAAVEYGLVDKVLTSRDDT 212
>gi|260460897|ref|ZP_05809147.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
opportunistum WSM2075]
gi|259033474|gb|EEW34735.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesorhizobium
opportunistum WSM2075]
Length = 209
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 155/205 (75%), Positives = 184/205 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED MATL+CAQLLFLE
Sbjct: 1 MKNPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEINLYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNE+YVK+ GK+YEE+EKTLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEVYVKHTGKSYEEIEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M+A EA D+G++DKV+ SR E
Sbjct: 181 HFMTADEARDFGLIDKVISSREAAE 205
>gi|270263570|ref|ZP_06191839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
gi|270042454|gb|EFA15549.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Serratia
odorifera 4Rx13]
Length = 207
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAE+P+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAESPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G+T E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQTLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD M+A EA ++G+VD +L R
Sbjct: 179 ERDTERDRFMTAEEAVEYGLVDGILTHRS 207
>gi|17982823|gb|AAL52055.1| ATP-dependent clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
Length = 247
Score = 252 bits (643), Expect = 3e-65, Method: Composition-based stats.
Identities = 147/216 (68%), Positives = 185/216 (85%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ ++ +D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+C
Sbjct: 32 LIYQRPIMRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVC 91
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+
Sbjct: 92 AQLLFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLT 151
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G R+AL NARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +
Sbjct: 152 AGATGHRYALLNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTI 211
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
E+TLDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 212 ERTLDRDHFMTAQEALEFGLIDKVVEARDVSADESK 247
>gi|323495056|ref|ZP_08100145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
gi|323310713|gb|EGA63888.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
Length = 208
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 129/210 (61%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDSVLNHRGE 208
>gi|153009536|ref|YP_001370751.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
anthropi ATCC 49188]
gi|151561424|gb|ABS14922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
anthropi ATCC 49188]
Length = 230
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 150/213 (70%), Positives = 184/213 (86%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ +D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQL
Sbjct: 18 QRPIMRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQL 77
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEAENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG
Sbjct: 78 LFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGA 137
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ YE +E+T
Sbjct: 138 TGQRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERT 197
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
LDRDH M+A EA ++G++DKV+ SR ++SK
Sbjct: 198 LDRDHFMTAQEALEFGLIDKVVESRDVGADESK 230
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 251 bits (642), Expect = 4e-65, Method: Composition-based stats.
Identities = 113/198 (57%), Positives = 154/198 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+F+ I D +A ++ AQLLFL+AE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL+AG KG RFALPN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A+ I+K++ LN I + G+ E ++K DRD+ +SA+EA
Sbjct: 121 MIHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++DKV+ S ++
Sbjct: 181 VEYGLIDKVITSEPSSKK 198
>gi|83954269|ref|ZP_00962989.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
NAS-14.1]
gi|83841306|gb|EAP80476.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
NAS-14.1]
Length = 219
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D D ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL L
Sbjct: 1 MNDPHDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL AGEKGM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HAQ+ K+K RLNEIYVK+ G+ E+VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQPLEKVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS EA DWG++D+++ +R +++
Sbjct: 181 DNFMSPEEAKDWGLIDEIVENRGKMDDPD 209
>gi|237730414|ref|ZP_04560895.1| conserved hypothetical protein [Citrobacter sp. 30_2]
gi|226905953|gb|EEH91871.1| conserved hypothetical protein [Citrobacter sp. 30_2]
Length = 243
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSASEAVEYGLVDSILTHRN 243
>gi|91775762|ref|YP_545518.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
gi|116243149|sp|Q1H1G0|CLPP_METFK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91709749|gb|ABE49677.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Methylobacillus flagellatus KT]
Length = 213
Score = 251 bits (641), Expect = 5e-65, Method: Composition-based stats.
Identities = 122/210 (58%), Positives = 159/210 (75%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ + A+ E LG +PMV+EQ+ RGERSYDIYSRLLKERI+F+ G + D A L+
Sbjct: 2 IHYPATAQSQFEAQGLGYIPMVIEQSGRGERSYDIYSRLLKERIIFLVGPVNDATANLVV 61
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP K+I YINSPGG VTAGM IYDTMQF+KP +ST C+GQAASMG+LLL+
Sbjct: 62 AQLLFLEAENPDKDIYFYINSPGGSVTAGMGIYDTMQFVKPDVSTLCVGQAASMGALLLA 121
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G RF LPN+R+++HQP GGF GQASDIE HA++I+ ++ +LN I + G+ E++
Sbjct: 122 AGAQGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFLREKLNHILASHTGQPVEKI 181
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
DRD+ MSA ++ +G+VDKV+ SR D
Sbjct: 182 ALDTDRDNFMSAEQSVAYGIVDKVIASRAD 211
>gi|261822507|ref|YP_003260613.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
wasabiae WPP163]
gi|261606520|gb|ACX89006.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium wasabiae WPP163]
Length = 207
Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 130/208 (62%), Positives = 170/208 (81%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ + + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+
Sbjct: 1 MSYSGEQER--QAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R LPN+R+++HQP GGF GQA+DIE HA++I+K+K ++NE+ K+ G+ E +
Sbjct: 119 AGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD +SASEA ++G+VD V +R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSVFTNR 206
>gi|115311359|sp|Q2W3H9|CLPP_MAGMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 251 bits (640), Expect = 6e-65, Method: Composition-based stats.
Identities = 128/201 (63%), Positives = 170/201 (84%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQTNRGERSYDIYSRLLKERI+F+TGQ+ D +A+LICAQLLFLE+ENP K+
Sbjct: 1 MNTLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVYDEVASLICAQLLFLESENPSKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+ YINSPGGVVT+G+AIYDTMQ+I+P +ST C+GQAASMGSLL++AGEKG RF+LPN+R
Sbjct: 61 IAFYINSPGGVVTSGLAIYDTMQYIRPKVSTVCIGQAASMGSLLMTAGEKGKRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG GQA+DIE A++I+ ++ RLN IYV++ G+ + +EK ++RD M+A E
Sbjct: 121 IMVHQPSGGAQGQATDIEIQAREILALRARLNNIYVEHTGQPLDVIEKVMERDKFMTADE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++D+V+ R +E+ S
Sbjct: 181 AKEFGLIDEVVNKRPAVEDDS 201
>gi|71907348|ref|YP_284935.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
gi|110816458|sp|Q47FB6|CLPP_DECAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71846969|gb|AAZ46465.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dechloromonas
aromatica RCB]
Length = 209
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 127/209 (60%), Positives = 163/209 (77%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ + + D + LGLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G + D A L+
Sbjct: 1 MNIDNASNWDPQA--LGLVPMVVEQSGRGERAYDIYSRLLKERVIFLVGPVNDVTANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP K+I YINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+
Sbjct: 59 AQLLFLEAENPDKDIYFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLN 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RFALPN+R+++HQP GGF GQASDI HA++I+ I+ RLN I ++ G+ E +
Sbjct: 119 AGAKGKRFALPNSRVMIHQPLGGFQGQASDIAIHAKEILSIRDRLNRIMAEHSGQPLERI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
EK DRD+ +SA+EA ++G++DKVL R
Sbjct: 179 EKDTDRDNFLSAAEAAEYGLIDKVLTRRD 207
>gi|258621302|ref|ZP_05716336.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|258625374|ref|ZP_05720271.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|262166052|ref|ZP_06033789.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
gi|262171083|ref|ZP_06038761.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|258582365|gb|EEW07217.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM603]
gi|258586690|gb|EEW11405.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM573]
gi|261892159|gb|EEY38145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
MB-451]
gi|262025768|gb|EEY44436.1| ATP-dependent Clp protease proteolytic subunit [Vibrio mimicus
VM223]
Length = 208
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 128/210 (60%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K +F LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HA++I+ IK +LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKNKLNRLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLKHRGE 208
>gi|157146946|ref|YP_001454265.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
gi|157084151|gb|ABV13829.1| hypothetical protein CKO_02723 [Citrobacter koseri ATCC BAA-895]
Length = 243
Score = 250 bits (639), Expect = 8e-65, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSASEAVEYGLVDSILTHRN 243
>gi|307129927|ref|YP_003881943.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
gi|306527456|gb|ADM97386.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Dickeya dadantii 3937]
Length = 207
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 134/209 (64%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--EQEKQAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G+ E +
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEAI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA+EA D+G+VD VL R
Sbjct: 179 ERDTERDRFLSAAEAVDYGLVDSVLTHRE 207
>gi|261210563|ref|ZP_05924856.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341]
gi|262404275|ref|ZP_06080830.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586]
gi|260840348|gb|EEX66919.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC341]
gi|262349307|gb|EEY98445.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. RC586]
Length = 208
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 129/210 (61%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K +F LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLKHRGE 208
>gi|237707568|ref|ZP_04538049.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|226898778|gb|EEH85037.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Escherichia
sp. 3_2_53FAA]
gi|332103940|gb|EGJ07286.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Shigella sp.
D9]
Length = 227
Score = 250 bits (639), Expect = 9e-65, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 21 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 78
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 79 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 138
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 139 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 198
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 199 ERDTERDRFLSAPEAVEYGLVDSILTHRN 227
>gi|161504375|ref|YP_001571487.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-- str. RSK2980]
gi|160865722|gb|ABX22345.1| hypothetical protein SARI_02486 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 243
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSAPEAVEYGLVDSILTHRN 243
>gi|299135043|ref|ZP_07028234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Afipia sp.
1NLS2]
gi|298590020|gb|EFI50224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Afipia sp.
1NLS2]
Length = 210
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 137/203 (67%), Positives = 177/203 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED M+TL+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+ Y+ +E L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQDYKTIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
+ ++A +A D+G+VDKV+ R +
Sbjct: 181 NFLTADKAKDFGIVDKVIDKRPE 203
>gi|62126693|gb|AAX64396.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F215 [Salmonella enterica subsp.
enterica serovar Choleraesuis str. SC-B67]
Length = 246
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 40 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 97
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 98 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 157
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 158 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 217
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 218 ERDTERDRFLSAPEAVEYGLVDSILTHRN 246
>gi|227113465|ref|ZP_03827121.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. brasiliensis PBR1692]
gi|253687443|ref|YP_003016633.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
gi|251754021|gb|ACT12097.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pectobacterium carotovorum subsp. carotovorum PC1]
Length = 207
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 131/208 (62%), Positives = 170/208 (81%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ + + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+
Sbjct: 1 MSYSGEQER--QAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R LPN+R+++HQP GGF GQA+DIE HA++I+K+K ++NE+ K+ G+ E +
Sbjct: 119 AGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD +SASEA D+G+VD V +R
Sbjct: 179 ERDTERDRFLSASEAVDYGLVDSVFTNR 206
>gi|144899460|emb|CAM76324.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Magnetospirillum gryphiswaldense MSR-1]
Length = 214
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 177/209 (84%), Gaps = 1/209 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
++D D+++ LVPMVVEQTNRGERSYDIYSRLLKERIVF+TGQ+ D ++TLICAQLL
Sbjct: 1 MRERDPIDLYMNTLVPMVVEQTNRGERSYDIYSRLLKERIVFLTGQVYDEVSTLICAQLL 60
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FLE+ENP K+I+ YINSPGGVVT+G+A+YDTMQ+I+P +ST C+GQAASMGSLLL+AG K
Sbjct: 61 FLESENPNKDIAFYINSPGGVVTSGLAMYDTMQYIRPSVSTVCLGQAASMGSLLLTAGAK 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RF+LPNAR+++HQPSGG GQA+DIE A++I+ ++ RLN +YV++ G+T E +E+ +
Sbjct: 121 GKRFSLPNARVMIHQPSGGAQGQATDIEIQAREILALRARLNNMYVQHTGQTLEVIERAM 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+RD M+A EA ++G++D+V+ +R +EE
Sbjct: 181 ERDKYMTADEAKEFGLIDEVVSNRPTLEE 209
>gi|313903081|ref|ZP_07836475.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
gi|313466583|gb|EFR62103.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
Length = 199
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 101/195 (51%), Positives = 148/195 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQTNRGER+YDIYSRLLK+RIVF+ I+D +A + AQLLFL+ ++P ++I
Sbjct: 1 MNLVPYVIEQTNRGERAYDIYSRLLKDRIVFIGTPIDDVVANSVIAQLLFLQTDDPDRDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG V +G+AIYDTMQ IKP ++T+C+G AASMG++LL+ G KG R+ALP++RI
Sbjct: 61 SIYINSPGGSVDSGLAIYDTMQHIKPDVATYCVGLAASMGAILLAGGTKGKRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G A+D++ +A ++K+++ NEI K+ G+ E +E+ +RD M+A EA
Sbjct: 121 MIHQPHSQVGGTAADVKIYADQLLKLRQVANEILAKHTGQPLERIERDTERDFFMTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D VL R
Sbjct: 181 KEYGIIDHVLEPRSK 195
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLSHRS 207
>gi|312113123|ref|YP_004010719.1| endopeptidase Clp [Rhodomicrobium vannielii ATCC 17100]
gi|311218252|gb|ADP69620.1| Endopeptidase Clp [Rhodomicrobium vannielii ATCC 17100]
Length = 214
Score = 250 bits (638), Expect = 1e-64, Method: Composition-based stats.
Identities = 142/208 (68%), Positives = 179/208 (86%), Gaps = 1/208 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + + LVPMVVEQTNRGER++DIYSRLLKERI+F+TG +ED+MA+L+ AQLLFL
Sbjct: 1 MRDPVEFYTSQLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGVVEDNMASLVIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEI++YINSPGG VT+G+A+YDTMQFI+PP+ST C+GQAASMGSLLL+AGE GM
Sbjct: 61 ESENPKKEINIYINSPGGHVTSGLAMYDTMQFIRPPVSTLCVGQAASMGSLLLAAGEPGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ALPNAR+++HQPS GF GQASDIERHA+DI+K KRRLNEIYVK+ G+ YE +E+TLDR
Sbjct: 121 RWALPNARVMVHQPSAGFQGQASDIERHAEDILKTKRRLNEIYVKHTGQPYEVIERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEK 214
DH MS +A +G++D+VL R EE
Sbjct: 181 DHFMSPEQAKAFGIIDEVLTKRAAAEET 208
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
Length = 193
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT RGER+YDIYSRLLK+RI+F++ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MALVPTVVEQTGRGERAYDIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA+ I+KIK RLN+I + G+ E++++ +RD+ MSA EA
Sbjct: 121 MIHQPLGGAKGQATDIEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D+V+ +
Sbjct: 181 KEYGLIDEVIEKK 193
>gi|123443342|ref|YP_001007316.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. enterocolitica 8081]
gi|2493738|sp|Q60107|CLPP_YEREN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214722|sp|A1JNN2|CLPP_YERE8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1377852|gb|AAC45782.1| ClpP [Yersinia enterocolitica]
gi|122090303|emb|CAL13169.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
enterocolitica subsp. enterocolitica 8081]
Length = 207
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 134/209 (64%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD V R
Sbjct: 179 ERDTERDRFLSADEAVEYGLVDSVFTRRD 207
>gi|167646810|ref|YP_001684473.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter sp.
K31]
gi|189082451|sp|B0SZQ2|CLPP_CAUSK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167349240|gb|ABZ71975.1| Endopeptidase Clp [Caulobacter sp. K31]
Length = 208
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 150/206 (72%), Positives = 178/206 (86%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D + LVPMVVEQT+RGER++DI+SRLLKERI+F+TG +ED MA+LICAQLLFLE+E
Sbjct: 3 DPMATAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+KEI++YINSPGGVVTAG+AIYDTMQ+IK P+ST CMG AASMGSLLL AG G R A
Sbjct: 63 NPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLQAGAPGHRIA 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGGF GQASDIERHA+DI+K KRRLNEIYVK+ G+TYEEVEKTLDRDH
Sbjct: 123 LPNARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHTGRTYEEVEKTLDRDHF 182
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKS 215
MSA EA WG++D + SR + +EK+
Sbjct: 183 MSAEEAKAWGLIDHINESRDEADEKA 208
>gi|206578475|ref|YP_002240083.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238893386|ref|YP_002918120.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae NTUH-K2044]
gi|288936834|ref|YP_003440893.1| ATP-dependent Clp protease proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|290510110|ref|ZP_06549480.1| Clp protease [Klebsiella sp. 1_1_55]
gi|206567533|gb|ACI09309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
pneumoniae 342]
gi|238545702|dbj|BAH62053.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae NTUH-K2044]
gi|288891543|gb|ADC59861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Klebsiella
variicola At-22]
gi|289776826|gb|EFD84824.1| Clp protease [Klebsiella sp. 1_1_55]
Length = 207
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA+EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAAEAVEYGLVDSILTHRN 207
>gi|283784263|ref|YP_003364128.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
gi|282947717|emb|CBG87272.1| ATP-dependent clp protease proteolytic subunit [Citrobacter
rodentium ICC168]
Length = 207
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 127/202 (62%), Positives = 159/202 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MQNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G KG
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ + G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA+EA ++G+VD VL R
Sbjct: 181 DNFMSATEAAEYGLVDSVLDKR 202
>gi|169831635|ref|YP_001717617.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
gi|169638479|gb|ACA59985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Desulforudis audaxviator MP104C]
Length = 198
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 118/198 (59%), Positives = 157/198 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+VVEQT RGER+YDIYSRLLK+RIVF+ G IEDH+A LI AQLLFLEAE+P K+
Sbjct: 1 MNTLVPIVVEQTARGERAYDIYSRLLKDRIVFIGGPIEDHVANLIIAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG+VT+GMAIYDTMQ+I+P +ST C+GQAAS G+ LL+AG G RFALP AR
Sbjct: 61 IHLYINSPGGLVTSGMAIYDTMQYIRPDVSTICLGQAASFGAFLLAAGTPGKRFALPYAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA++I+ HA++I++ KR LNE+ K+ G+ E++E+ +RD MS +
Sbjct: 121 IMMHQPLGGVQGQATEIDIHAREILRTKRVLNELLAKHTGQPVEKIERDTERDFFMSPEQ 180
Query: 195 ACDWGVVDKVLMSRIDIE 212
A ++G++D+V+ R +
Sbjct: 181 AREYGIIDEVITVRKKAK 198
>gi|115524517|ref|YP_781428.1| endopeptidase Clp [Rhodopseudomonas palustris BisA53]
gi|122296222|sp|Q07NN6|CLPP_RHOP5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|115518464|gb|ABJ06448.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisA53]
Length = 211
Score = 249 bits (637), Expect = 1e-64, Method: Composition-based stats.
Identities = 139/209 (66%), Positives = 176/209 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED M+TL+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL AG K MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLCAGAKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++A A D+G+VDKV+ R + +K
Sbjct: 181 KFLTADMARDFGLVDKVIDKRPEEASPAK 209
>gi|161615359|ref|YP_001589324.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197263975|ref|ZP_03164049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|198242637|ref|YP_002214402.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|200390046|ref|ZP_03216657.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205357179|ref|ZP_02345490.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205359635|ref|ZP_02830941.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224582286|ref|YP_002636084.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|161364723|gb|ABX68491.1| hypothetical protein SPAB_03130 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|197242230|gb|EDY24850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA23]
gi|197937153|gb|ACH74486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Dublin str.
CT_02021853]
gi|199602491|gb|EDZ01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Virchow str. SL491]
gi|205323485|gb|EDZ11324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Saintpaul str. SARA29]
gi|205344194|gb|EDZ30958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Weltevreden str.
HI_N05-537]
gi|224466813|gb|ACN44643.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi C strain RKS4594]
gi|322713521|gb|EFZ05092.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. A50]
gi|326622151|gb|EGE28496.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Dublin str. 3246]
Length = 243
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSAPEAVEYGLVDSILTHRN 243
>gi|86148885|ref|ZP_01067136.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. MED222]
gi|85833328|gb|EAQ51535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. MED222]
Length = 198
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 127/198 (64%), Positives = 159/198 (80%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 1 SIMDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVVAQLLFLESENPD 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R LPN
Sbjct: 61 KDIYLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGTPGKRHVLPN 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E VE+ DRD+ MSA
Sbjct: 121 SRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVVERDTDRDNFMSA 180
Query: 193 SEACDWGVVDKVLMSRID 210
+A ++G+VD VL R
Sbjct: 181 DQAVEYGLVDSVLNHRGQ 198
>gi|239831859|ref|ZP_04680188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
intermedium LMG 3301]
gi|239824126|gb|EEQ95694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ochrobactrum
intermedium LMG 3301]
Length = 230
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 149/213 (69%), Positives = 184/213 (86%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ +D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQL
Sbjct: 18 QRPIMRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQL 77
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEAENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG
Sbjct: 78 LFLEAENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGA 137
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ YE +E+T
Sbjct: 138 TGQRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYETIERT 197
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
LDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 198 LDRDHFMTAQEALEFGLIDKVVEARDVSADESK 230
>gi|84387735|ref|ZP_00990751.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
12B01]
gi|218710174|ref|YP_002417795.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
LGP32]
gi|254763809|sp|B7VI00|CLPP_VIBSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84377418|gb|EAP94285.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
12B01]
gi|218323193|emb|CAV19370.1| ATP-dependent Clp protease proteolytic subunit [Vibrio splendidus
LGP32]
Length = 208
Score = 249 bits (637), Expect = 2e-64, Method: Composition-based stats.
Identities = 130/210 (61%), Positives = 164/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNTMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E V
Sbjct: 119 GGTPGKRHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVV 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDSVLNHRGQ 208
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 117/196 (59%), Positives = 162/196 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT+RGER+YDIYSRLLK+RI+F+ G I+DH+A L+ AQLLFLEAE+P+K+I L
Sbjct: 5 LVPIVVEQTSRGERAYDIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAEDPEKDIHL 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG+VTAGMAIYDTMQ+I+P +ST C+GQAASM + LL+AG KG R+ALP ARI+L
Sbjct: 65 YINSPGGLVTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYALPYARIML 124
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+++E HA++I+++++ LNE+ K+ G+ E++ + DRD M+A +A D
Sbjct: 125 HQPLGGFQGQATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFMTAQQAKD 184
Query: 198 WGVVDKVLMSRIDIEE 213
+G++D+V+ R +
Sbjct: 185 YGLIDEVITMRKKPAK 200
>gi|323128768|gb|ADX16198.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 4/74]
Length = 246
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 40 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 97
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 98 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 157
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 158 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 217
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 218 ERDTERDRFLSAPEAVEYGLVDSILTHRN 246
>gi|50120087|ref|YP_049254.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
gi|60389567|sp|Q6D827|CLPP_ERWCT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49610613|emb|CAG74058.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
atrosepticum SCRI1043]
Length = 207
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/208 (62%), Positives = 169/208 (81%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ + + LVPMVVEQT RGERSYDIYSRLLKERI+F+TGQ+ED+MA L+
Sbjct: 1 MSYSGEQER--QAPHMALVPMVVEQTARGERSYDIYSRLLKERIIFLTGQVEDYMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R LPN+R+++HQP GGF GQA+DIE HA++I+K+K ++NE+ K+ G+ E +
Sbjct: 119 AGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD +SASEA ++G+VD V +R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSVFTNR 206
>gi|296101559|ref|YP_003611705.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
gi|295056018|gb|ADF60756.1| ATP-dependent Clp protease, protease subunit [Enterobacter cloacae
subsp. cloacae ATCC 13047]
Length = 207
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 175/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSILTHRN 207
>gi|197105280|ref|YP_002130657.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium
zucineum HLK1]
gi|196478700|gb|ACG78228.1| ATP-dependent Clp protease, proteolytic subunit [Phenylobacterium
zucineum HLK1]
Length = 205
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 139/202 (68%), Positives = 168/202 (83%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D LGLVPMVVEQT+RGER+YDI+SRLLK+RIVF+ G +ED MA+LICAQLL LE
Sbjct: 1 MRDPVTTALGLVPMVVEQTSRGERAYDIFSRLLKDRIVFLAGPVEDGMASLICAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI +YINSPGGVVT+G+AIYDTMQ+IK P+ T C+G AASMGS LL AGEKG R
Sbjct: 61 AENPKKEIQMYINSPGGVVTSGLAIYDTMQYIKSPVITLCLGMAASMGSFLLMAGEKGQR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+RI++HQPSGG+SG+A+DI+RHA+DI+K KRRLNEIY K+ G+ E VE+TLDRD
Sbjct: 121 IALPNSRIMVHQPSGGYSGKATDIQRHAEDIIKTKRRLNEIYAKHTGQPIEAVEETLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
M+A EA DWG+VD V R
Sbjct: 181 FFMTAQEAKDWGLVDHVWEKRD 202
>gi|89073230|ref|ZP_01159760.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90579278|ref|ZP_01235088.1| ATP-dependent Clp protease proteolytic subunit [Vibrio angustum
S14]
gi|89050940|gb|EAR56404.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
SKA34]
gi|90440111|gb|EAS65292.1| ATP-dependent Clp protease proteolytic subunit [Vibrio angustum
S14]
Length = 207
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK+RLN + ++ G+ E V
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQPLEVV 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSAEQAVEYGLVDAVLSQRD 207
>gi|332160749|ref|YP_004297326.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|318604628|emb|CBY26126.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica Y11]
gi|325664979|gb|ADZ41623.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica subsp. palearctica 105.5R(r)]
gi|330859950|emb|CBX70279.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
enterocolitica W22703]
Length = 207
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 134/209 (64%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA +G+VD V R
Sbjct: 179 ERDTERDRFLSADEAVKYGLVDSVFTRRD 207
>gi|226939792|ref|YP_002794865.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
gi|254763792|sp|C1D539|CLPP_LARHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226714718|gb|ACO73856.1| Protease subunit of ATP-dependent Clp protease [Laribacter
hongkongensis HLHK9]
Length = 212
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 123/202 (60%), Positives = 162/202 (80%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
LGLVPMVVEQ+ RGER+YDIYSRLLKERIVF+ G + D A L+ AQ+LFLE+E
Sbjct: 11 QPAPQALGLVPMVVEQSGRGERAYDIYSRLLKERIVFMVGPVTDETANLVVAQMLFLESE 70
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I LYINSPGG VTAG++IYDTM FIKP +ST C+GQAASMG+ LLSAG KG RFA
Sbjct: 71 NPDKDIHLYINSPGGSVTAGLSIYDTMNFIKPSVSTLCIGQAASMGAFLLSAGAKGKRFA 130
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQASD E HA++I+ +KR+LNE+ +CG+ E++E+ DRD+
Sbjct: 131 LPNSRVMIHQPLGGFQGQASDFEIHAREILTLKRKLNELMAAHCGRPLEDLERDTDRDNF 190
Query: 190 MSASEACDWGVVDKVLMSRIDI 211
M+A++A ++G++D+VL +R +
Sbjct: 191 MNAAQALEYGLIDQVLENRAAV 212
>gi|121727845|ref|ZP_01680912.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229507982|ref|ZP_04397487.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229511781|ref|ZP_04401260.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229515308|ref|ZP_04404768.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229518918|ref|ZP_04408361.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229523942|ref|ZP_04413347.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229529052|ref|ZP_04418442.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229607528|ref|YP_002878176.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254849010|ref|ZP_05238360.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255745319|ref|ZP_05419268.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262156043|ref|ZP_06029163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|262167884|ref|ZP_06035584.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|297579440|ref|ZP_06941368.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|298498040|ref|ZP_07007847.1| clp protease [Vibrio cholerae MAK 757]
gi|121629881|gb|EAX62295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae V52]
gi|229332826|gb|EEN98312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
12129(1)]
gi|229337523|gb|EEO02540.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae bv.
albensis VL426]
gi|229343607|gb|EEO08582.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC9]
gi|229348013|gb|EEO12972.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae TMA
21]
gi|229351746|gb|EEO16687.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
B33]
gi|229355487|gb|EEO20408.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae BX
330286]
gi|229370183|gb|ACQ60606.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
MJ-1236]
gi|254844715|gb|EET23129.1| ATP-dependent Clp protease [Vibrio cholerae MO10]
gi|255737149|gb|EET92545.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholera CIRS
101]
gi|262023611|gb|EEY42312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
RC27]
gi|262030221|gb|EEY48865.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
INDRE 91/1]
gi|297537034|gb|EFH75867.1| ATP-dependent Clp protease [Vibrio cholerae RC385]
gi|297542373|gb|EFH78423.1| clp protease [Vibrio cholerae MAK 757]
gi|327484465|gb|AEA78872.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
LMA3894-4]
Length = 208
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/210 (61%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K +F LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLKHRGE 208
>gi|89070383|ref|ZP_01157690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oceanicola
granulosus HTCC2516]
gi|89044030|gb|EAR50205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oceanicola
granulosus HTCC2516]
Length = 209
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 130/202 (64%), Positives = 171/202 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D MA+LI AQL+ LE
Sbjct: 1 MHDPIETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMASLIVAQLIHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G++IYDTMQ+IKPP+ST +GQAASMGSLLL+ GEKGMR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLSIYDTMQYIKPPVSTLVIGQAASMGSLLLAGGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+LPN+RI++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYVK+ G+T ++VE L+RD
Sbjct: 121 LSLPNSRIMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQTLKKVEAALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MS EA DWG++D++ +R
Sbjct: 181 NFMSPEEAKDWGLIDEIFENRA 202
>gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
CMCP6]
gi|37679288|ref|NP_933897.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
YJ016]
gi|320156969|ref|YP_004189348.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
gi|27359628|gb|AAO08567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
vulnificus CMCP6]
gi|37198031|dbj|BAC93868.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio vulnificus
YJ016]
gi|319932281|gb|ADV87145.1| ATP-dependent Clp protease proteolytic subunit [Vibrio vulnificus
MO6-24/O]
Length = 208
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 128/209 (61%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKTKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLTHRS 207
>gi|255261268|ref|ZP_05340610.1| Clp protease [Thalassiobium sp. R2A62]
gi|255103603|gb|EET46277.1| Clp protease [Thalassiobium sp. R2A62]
Length = 209
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 127/208 (61%), Positives = 170/208 (81%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M+ LI AQLL LE
Sbjct: 1 MNDPVETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSQLIVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+R+++HQPSGG+ GQA+DI HA + K+K RLN IYV++ G+T ++VE L+RD
Sbjct: 121 FSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKDRLNSIYVRHTGQTLKKVEAALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ MSA +A DWG++D+++ +R ++
Sbjct: 181 NFMSAEDAKDWGLIDEIVENRNKEDDAK 208
>gi|291085757|ref|ZP_06571180.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
gi|291069764|gb|EFE07873.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Citrobacter
youngae ATCC 29220]
Length = 243
Score = 249 bits (636), Expect = 2e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFMTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSASEAVEYGLVDSILTHRN 243
>gi|170727453|ref|YP_001761479.1| ATP-dependent Clp protease proteolytic subunit [Shewanella woodyi
ATCC 51908]
gi|226706474|sp|B1KLT7|CLPP_SHEWM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169812800|gb|ACA87384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
woodyi ATCC 51908]
Length = 203
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 127/202 (62%), Positives = 158/202 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MQNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP +EISLYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G KG
Sbjct: 61 ESENPDQEISLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASD HAQ+I+ IK +LN I ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDFAIHAQEILGIKNKLNNILAEHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA++A ++G+VD V R
Sbjct: 181 DNFMSAAQAAEYGLVDSVFEQR 202
>gi|16759428|ref|NP_455045.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16763829|ref|NP_459444.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. LT2]
gi|29142800|ref|NP_806142.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|162139608|ref|YP_215477.2| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Choleraesuis str. SC-B67]
gi|168237562|ref|ZP_02662620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|168261116|ref|ZP_02683089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|168465541|ref|ZP_02699423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|194443946|ref|YP_002039691.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Newport str. SL254]
gi|194451357|ref|YP_002044483.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL476]
gi|194734455|ref|YP_002113479.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. CVM19633]
gi|204930575|ref|ZP_03221505.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|207855928|ref|YP_002242579.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|213025962|ref|ZP_03340409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. 404ty]
gi|213419494|ref|ZP_03352560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E01-6750]
gi|213425858|ref|ZP_03358608.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E02-1180]
gi|213646005|ref|ZP_03376058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. J185]
gi|213853068|ref|ZP_03382600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. M223]
gi|238911421|ref|ZP_04655258.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Tennessee str. CDC07-0191]
gi|60391923|sp|P0A1D7|CLPP_SALTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|60391924|sp|P0A1D8|CLPP_SALTI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|67460140|sp|Q57SB5|CLPP_SALCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706468|sp|B5QTJ6|CLPP_SALEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706469|sp|B4T9E3|CLPP_SALHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706470|sp|B4SWU1|CLPP_SALNS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706472|sp|B4TMC6|CLPP_SALSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289858|pir||AC0558 ATP-dependent clp protease proteolytic chain [imported] -
Salmonella enterica subsp. enterica serovar Typhi
(strain CT18)
gi|7594816|dbj|BAA94668.1| serine protease subunit [Salmonella enterica subsp. enterica
serovar Typhimurium]
gi|16418955|gb|AAL19403.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Salmonella enterica subsp. enterica serovar Typhimurium
str. LT2]
gi|16501719|emb|CAD08907.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi]
gi|29138432|gb|AAO70002.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. Ty2]
gi|194402609|gb|ACF62831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL254]
gi|194409661|gb|ACF69880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL476]
gi|194709957|gb|ACF89178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
CVM19633]
gi|195631923|gb|EDX50443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Newport str. SL317]
gi|197289522|gb|EDY28885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Schwarzengrund str.
SL480]
gi|204320509|gb|EDZ05712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Javiana str.
GA_MM04042433]
gi|205350070|gb|EDZ36701.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Hadar str. RI_05P066]
gi|206707731|emb|CAR32016.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Enteritidis str. P125109]
gi|261245731|emb|CBG23528.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. D23580]
gi|267992163|gb|ACY87048.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. 14028S]
gi|301157059|emb|CBW16543.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. SL1344]
gi|312911481|dbj|BAJ35455.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhimurium str.
T000240]
gi|320084722|emb|CBY94513.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
gi|322614726|gb|EFY11655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315996572]
gi|322618832|gb|EFY15720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-1]
gi|322623539|gb|EFY20378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-3]
gi|322629162|gb|EFY25941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
495297-4]
gi|322631883|gb|EFY28637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-1]
gi|322637380|gb|EFY34082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
515920-2]
gi|322642065|gb|EFY38675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 531954]
gi|322647884|gb|EFY44359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
NC_MB110209-0054]
gi|322652562|gb|EFY48916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
OH_2009072675]
gi|322653276|gb|EFY49609.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
CASC_09SCPH15965]
gi|322660575|gb|EFY56811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 19N]
gi|322664727|gb|EFY60920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
81038-01]
gi|322669220|gb|EFY65370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MD_MDA09249507]
gi|322670765|gb|EFY66898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 414877]
gi|322678996|gb|EFY75051.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 366867]
gi|322682025|gb|EFY78050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 413180]
gi|322685146|gb|EFY81143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 446600]
gi|323192960|gb|EFZ78183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
609458-1]
gi|323196958|gb|EFZ82100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
556150-1]
gi|323203943|gb|EFZ88960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 609460]
gi|323206972|gb|EFZ91925.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
507440-20]
gi|323214175|gb|EFZ98933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str. 556152]
gi|323214501|gb|EFZ99252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB101509-0077]
gi|323223058|gb|EGA07401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB102109-0047]
gi|323227007|gb|EGA11188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB110209-0055]
gi|323230175|gb|EGA14295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
MB111609-0052]
gi|323233913|gb|EGA18002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009083312]
gi|323238393|gb|EGA22451.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
2009085258]
gi|323244080|gb|EGA28089.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
315731156]
gi|323246241|gb|EGA30224.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2009159199]
gi|323251867|gb|EGA35730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008282]
gi|323257864|gb|EGA41543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008283]
gi|323261123|gb|EGA44715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008284]
gi|323264947|gb|EGA48446.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008285]
gi|323272510|gb|EGA55917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Montevideo str.
IA_2010008287]
Length = 207
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|56414396|ref|YP_151471.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197363316|ref|YP_002142953.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
gi|67460194|sp|Q5PFN4|CLPP_SALPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|226706471|sp|B5BD83|CLPP_SALPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56128653|gb|AAV78159.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. ATCC 9150]
gi|197094793|emb|CAR60326.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Paratyphi A str. AKU_12601]
Length = 207
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 128/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAG++IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGISIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|62290024|ref|YP_221817.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 1 str. 9-941]
gi|82699951|ref|YP_414525.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
biovar Abortus 2308]
gi|161619061|ref|YP_001592948.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC
23365]
gi|163843378|ref|YP_001627782.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC
23445]
gi|189024264|ref|YP_001935032.1| Clp protease [Brucella abortus S19]
gi|254689336|ref|ZP_05152590.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 6 str. 870]
gi|254693820|ref|ZP_05155648.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 3 str. Tulya]
gi|254697469|ref|ZP_05159297.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 2 str. 86/8/59]
gi|254701854|ref|ZP_05163682.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis bv. 5
str. 513]
gi|254706705|ref|ZP_05168533.1| ATP-dependent Clp protease proteolytic subunit [Brucella
pinnipedialis M163/99/10]
gi|254710187|ref|ZP_05171998.1| ATP-dependent Clp protease proteolytic subunit [Brucella
pinnipedialis B2/94]
gi|254714185|ref|ZP_05175996.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti
M644/93/1]
gi|254717620|ref|ZP_05179431.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti
M13/05/1]
gi|254719174|ref|ZP_05180985.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. 83/13]
gi|254730366|ref|ZP_05188944.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 4 str. 292]
gi|256031681|ref|ZP_05445295.1| ATP-dependent Clp protease proteolytic subunit [Brucella
pinnipedialis M292/94/1]
gi|256061193|ref|ZP_05451345.1| ATP-dependent Clp protease proteolytic subunit [Brucella neotomae
5K33]
gi|256159837|ref|ZP_05457570.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti
M490/95/1]
gi|256255083|ref|ZP_05460619.1| ATP-dependent Clp protease proteolytic subunit [Brucella ceti
B1/94]
gi|256257582|ref|ZP_05463118.1| ATP-dependent Clp protease proteolytic subunit [Brucella abortus
bv. 9 str. C68]
gi|260168815|ref|ZP_05755626.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. F5/99]
gi|260546576|ref|ZP_05822315.1| clp protease [Brucella abortus NCTC 8038]
gi|260566355|ref|ZP_05836825.1| clp protease [Brucella suis bv. 4 str. 40]
gi|260754852|ref|ZP_05867200.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870]
gi|260758069|ref|ZP_05870417.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292]
gi|260761893|ref|ZP_05874236.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59]
gi|260883864|ref|ZP_05895478.1| ClpP [Brucella abortus bv. 9 str. C68]
gi|261214103|ref|ZP_05928384.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya]
gi|261219456|ref|ZP_05933737.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261222276|ref|ZP_05936557.1| ClpP [Brucella ceti B1/94]
gi|261314167|ref|ZP_05953364.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261317744|ref|ZP_05956941.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261321952|ref|ZP_05961149.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261325200|ref|ZP_05964397.1| ClpP [Brucella neotomae 5K33]
gi|261752415|ref|ZP_05996124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 5 str. 513]
gi|261758300|ref|ZP_06002009.1| clp protease [Brucella sp. F5/99]
gi|265984170|ref|ZP_06096905.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|265988775|ref|ZP_06101332.1| ClpP [Brucella pinnipedialis M292/94/1]
gi|265998240|ref|ZP_06110797.1| ClpP [Brucella ceti M490/95/1]
gi|294852448|ref|ZP_06793121.1| Clp protease [Brucella sp. NVSL 07-0026]
gi|306838166|ref|ZP_07471022.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF
2653]
gi|306841836|ref|ZP_07474518.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2]
gi|306843974|ref|ZP_07476569.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO1]
gi|18203228|sp|Q9L7X6|CLPP_BRUAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90101403|sp|Q2YPX1|CLPP_BRUA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082449|sp|A9M5C2|CLPP_BRUC2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082450|sp|B0CGR1|CLPP_BRUSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706442|sp|B2S5W1|CLPP_BRUA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|6942106|gb|AAF32318.1|AF218420_1 ClpP [Brucella abortus]
gi|62196156|gb|AAX74456.1| ClpP, ATP-dependent Clp protease, proteolytic subunit ClpP
[Brucella abortus bv. 1 str. 9-941]
gi|82616052|emb|CAJ11088.1| Clp protease [Brucella melitensis biovar Abortus 2308]
gi|161335872|gb|ABX62177.1| ATP-dependent Clp protease proteolytic subunit [Brucella canis ATCC
23365]
gi|163674101|gb|ABY38212.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis ATCC
23445]
gi|189019836|gb|ACD72558.1| Clp protease [Brucella abortus S19]
gi|260095626|gb|EEW79503.1| clp protease [Brucella abortus NCTC 8038]
gi|260155873|gb|EEW90953.1| clp protease [Brucella suis bv. 4 str. 40]
gi|260668387|gb|EEX55327.1| endopeptidase Clp [Brucella abortus bv. 4 str. 292]
gi|260672325|gb|EEX59146.1| endopeptidase Clp [Brucella abortus bv. 2 str. 86/8/59]
gi|260674960|gb|EEX61781.1| endopeptidase Clp [Brucella abortus bv. 6 str. 870]
gi|260873392|gb|EEX80461.1| ClpP [Brucella abortus bv. 9 str. C68]
gi|260915710|gb|EEX82571.1| endopeptidase Clp [Brucella abortus bv. 3 str. Tulya]
gi|260920860|gb|EEX87513.1| ClpP [Brucella ceti B1/94]
gi|260924545|gb|EEX91113.1| ATP-dependent Clp protease [Brucella ceti M13/05/1]
gi|261294642|gb|EEX98138.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261296967|gb|EEY00464.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261301180|gb|EEY04677.1| ClpP [Brucella neotomae 5K33]
gi|261303193|gb|EEY06690.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261738284|gb|EEY26280.1| clp protease [Brucella sp. F5/99]
gi|261742168|gb|EEY30094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 5 str. 513]
gi|262552708|gb|EEZ08698.1| ClpP [Brucella ceti M490/95/1]
gi|264660972|gb|EEZ31233.1| ClpP [Brucella pinnipedialis M292/94/1]
gi|264662762|gb|EEZ33023.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|294821037|gb|EFG38036.1| Clp protease [Brucella sp. NVSL 07-0026]
gi|306275729|gb|EFM57453.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO1]
gi|306288063|gb|EFM59460.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. BO2]
gi|306406756|gb|EFM62979.1| ATP-dependent Clp protease proteolytic subunit [Brucella sp. NF
2653]
Length = 209
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 148/209 (70%), Positives = 183/209 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQLLFLE
Sbjct: 1 MRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +E+TLDRD
Sbjct: 121 YALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA ++G++DKV+ +R ++SK
Sbjct: 181 HFMTAQEALEFGLIDKVVEARDVSADESK 209
>gi|227328849|ref|ZP_03832873.1| ATP-dependent Clp protease proteolytic subunit [Pectobacterium
carotovorum subsp. carotovorum WPP14]
Length = 207
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 130/208 (62%), Positives = 170/208 (81%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ + + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+ED+MA L+
Sbjct: 1 MSYSGEQER--QAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDYMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R LPN+R+++HQP GGF GQA+DIE HA++I+K+K ++NE+ K+ G+ E +
Sbjct: 119 AGAKGKRICLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKAKMNELMAKHTGQPLEAI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD +SASEA D+G+VD V +R
Sbjct: 179 ERDTERDRFLSASEAVDYGLVDSVFTNR 206
>gi|317123029|ref|YP_004103032.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
gi|315593009|gb|ADU52305.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
Length = 199
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 147/195 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQTNRGER+YDIYSRLLK+RIVF+ I+D +A + AQLLFL+ ++P ++I
Sbjct: 1 MNLVPYVIEQTNRGERAYDIYSRLLKDRIVFIGTPIDDVVANSVIAQLLFLQTDDPDRDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG V +G+AIYDTMQ IKP ++T+C+G AASMG++LL+ G KG R+ALP++RI
Sbjct: 61 SIYINSPGGSVDSGLAIYDTMQHIKPDVATYCVGLAASMGAILLAGGTKGKRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G ASD++ +A ++K+++ NEI K+ G+ E +E+ +RD M+A EA
Sbjct: 121 MIHQPHSQVGGTASDVKIYADQLLKLRQVANEILAKHTGQPLERIERDTERDFFMTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D VL R
Sbjct: 181 KAYGIIDHVLEPRTK 195
>gi|163868071|ref|YP_001609275.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
tribocorum CIP 105476]
gi|189082448|sp|A9ISA4|CLPP_BART1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|161017722|emb|CAK01280.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
tribocorum CIP 105476]
Length = 210
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 152/209 (72%), Positives = 180/209 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMV+EQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSDPMKTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYV++ G+ YE +E+TLDRD
Sbjct: 121 FALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQGYEVIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G+VD V+ R + E++ K
Sbjct: 181 HFMTAEEAKAFGLVDDVIHYRAETEKEEK 209
>gi|194471774|ref|ZP_03077758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197249758|ref|YP_002145429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205357584|ref|ZP_02571531.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205358475|ref|ZP_02656494.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205358901|ref|ZP_02665206.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|289827300|ref|ZP_06545983.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-3139]
gi|194458138|gb|EDX46977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CVM29188]
gi|197213461|gb|ACH50858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Agona str. SL483]
gi|205331008|gb|EDZ17772.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar 4,[5],12:i:- str.
CVM23701]
gi|205334088|gb|EDZ20852.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Kentucky str. CDC 191]
gi|205340153|gb|EDZ26917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Heidelberg str. SL486]
gi|321226026|gb|EFX51077.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhimurium str. TN061786]
Length = 243
Score = 249 bits (635), Expect = 2e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 215 ERDTERDRFLSAPEAVEYGLVDSILTHRN 243
>gi|240850274|ref|YP_002971667.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
grahamii as4aup]
gi|240267397|gb|ACS50985.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bartonella
grahamii as4aup]
Length = 210
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 151/209 (72%), Positives = 179/209 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMV+EQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSDPMKTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYV++ G+ YE +E+TLDRD
Sbjct: 121 FTLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEIIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G+VD V+ R + E++ K
Sbjct: 181 HFMTAEEAKAFGLVDDVIQYRAETEKEEK 209
>gi|319943618|ref|ZP_08017899.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
gi|319742851|gb|EFV95257.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
Length = 262
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 113/200 (56%), Positives = 157/200 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG+VP+V+EQ+ RGER+YDIYSRLL+ER+VF+ G + D A L AQ+L+LE+ENP K+I
Sbjct: 58 LGMVPIVIEQSGRGERAYDIYSRLLRERVVFLVGPVMDQSANLAVAQMLYLESENPDKDI 117
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V+AG+ I+DTMQF+KP +ST C+G AASMG+ LL+AG KG R +LPN+RI
Sbjct: 118 HFYINSPGGSVSAGLGIFDTMQFVKPDVSTLCIGFAASMGAFLLAAGAKGKRHSLPNSRI 177
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDIE HA++I+ +++RLN+I G+ E +E+ +RD+ MSA EA
Sbjct: 178 MIHQPSGGAQGQASDIEIHAKEIIYLRKRLNQILADRTGQPLERIERDTERDNFMSADEA 237
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G++DKV+ SR + K+
Sbjct: 238 LEYGLIDKVMTSRTEATAKA 257
>gi|85704731|ref|ZP_01035832.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
217]
gi|85670549|gb|EAQ25409.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
217]
Length = 210
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 130/210 (61%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT+RGER+YDI+SRLLKERI+F++G + D M++LI AQLL L
Sbjct: 1 MKDPMDIYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEPGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HA++ K+K RLNEIYV++ G+T ++VE+ L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHARETQKLKDRLNEIYVRHTGQTLKKVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ MS EA WG++D+++ +R ++E K
Sbjct: 181 DNFMSPDEAKAWGLIDEIVANRDKVDEAKK 210
>gi|254485779|ref|ZP_05098984.1| Clp protease [Roseobacter sp. GAI101]
gi|214042648|gb|EEB83286.1| Clp protease [Roseobacter sp. GAI101]
Length = 215
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F++G + D M++LI AQLL L
Sbjct: 1 MNDPYETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL AGEKGM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HAQ+ K+K RLNEIYVK+ G++ E+VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQSLEKVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS EA DWG++D+++ +R +++ S
Sbjct: 181 DNFMSPEEAKDWGLIDEIVENRGKMDDPS 209
>gi|15800167|ref|NP_286179.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 EDL933]
gi|15829745|ref|NP_308518.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. Sakai]
gi|16128422|ref|NP_414971.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|26246448|ref|NP_752487.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|30061939|ref|NP_836110.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 2457T]
gi|56479658|ref|NP_706331.2| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2a str. 301]
gi|74311012|ref|YP_309431.1| ATP-dependent Clp protease proteolytic subunit [Shigella sonnei
Ss046]
gi|82542925|ref|YP_406872.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
Sb227]
gi|82775656|ref|YP_402003.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae Sd197]
gi|89107307|ref|AP_001087.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. W3110]
gi|91209511|ref|YP_539497.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UTI89]
gi|110640698|ref|YP_668426.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110804465|ref|YP_687985.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri 5
str. 8401]
gi|117622697|ref|YP_851610.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
APEC O1]
gi|157158299|ref|YP_001461624.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
E24377A]
gi|157159964|ref|YP_001457282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
HS]
gi|168754541|ref|ZP_02779548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|168768391|ref|ZP_02793398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|168778128|ref|ZP_02803135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|168778929|ref|ZP_02803936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|168786287|ref|ZP_02811294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|170021190|ref|YP_001726144.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ATCC 8739]
gi|170080023|ref|YP_001729343.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170683276|ref|YP_001742581.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SMS-3-5]
gi|187731303|ref|YP_001879148.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii CDC
3083-94]
gi|188492597|ref|ZP_02999867.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|191174674|ref|ZP_03036146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|193064129|ref|ZP_03045213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|195938496|ref|ZP_03083878.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC4024]
gi|208809540|ref|ZP_03251877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208815859|ref|ZP_03257038.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208822964|ref|ZP_03263282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209917654|ref|YP_002291738.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215485518|ref|YP_002327949.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O127:H6 str. E2348/69]
gi|217326412|ref|ZP_03442496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218549895|ref|YP_002383686.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ATCC 35469]
gi|218553004|ref|YP_002385917.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI1]
gi|218557347|ref|YP_002390260.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
S88]
gi|218688301|ref|YP_002396513.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ED1a]
gi|218693900|ref|YP_002401567.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
55989]
gi|218698651|ref|YP_002406280.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
IAI39]
gi|218703721|ref|YP_002411240.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UMN026]
gi|227884552|ref|ZP_04002357.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238899725|ref|YP_002925521.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|253774574|ref|YP_003037405.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254160506|ref|YP_003043614.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|254791621|ref|YP_003076458.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. TW14359]
gi|256020408|ref|ZP_05434273.1| ATP-dependent Clp protease proteolytic subunit [Shigella sp. D9]
gi|256023945|ref|ZP_05437810.1| ATP-dependent Clp protease proteolytic subunit [Escherichia sp.
4_1_40B]
gi|260842638|ref|YP_003220416.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|260853660|ref|YP_003227551.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|260866598|ref|YP_003233000.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|261223919|ref|ZP_05938200.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. FRIK2000]
gi|261256367|ref|ZP_05948900.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. FRIK966]
gi|291281344|ref|YP_003498162.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|293403558|ref|ZP_06647649.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|293408587|ref|ZP_06652426.1| Clp protease [Escherichia coli B354]
gi|297516115|ref|ZP_06934501.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
OP50]
gi|298379170|ref|ZP_06989051.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|300818231|ref|ZP_07098442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300820317|ref|ZP_07100469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300903295|ref|ZP_07121223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300918180|ref|ZP_07134787.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300930260|ref|ZP_07145673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300947910|ref|ZP_07162058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|301025667|ref|ZP_07189185.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|301330696|ref|ZP_07223298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|306813096|ref|ZP_07447289.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|307137081|ref|ZP_07496437.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
H736]
gi|307312185|ref|ZP_07591821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|309794830|ref|ZP_07689251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|331640957|ref|ZP_08342092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331645613|ref|ZP_08346717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331651375|ref|ZP_08352400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331656494|ref|ZP_08357456.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331661818|ref|ZP_08362741.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331666792|ref|ZP_08367666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331671984|ref|ZP_08372780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331676109|ref|ZP_08376821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331681832|ref|ZP_08382465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
gi|62288033|sp|P0A6G7|CLPP_ECOLI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Heat shock protein
F21.5; AltName: Full=Protease Ti; Flags: Precursor
gi|62288034|sp|P0A6G8|CLPP_ECOL6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288035|sp|P0A6G9|CLPP_ECO57 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|62288036|sp|P0A6H0|CLPP_SHIFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183183|sp|Q325G4|CLPP_SHIBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183184|sp|Q32JJ3|CLPP_SHIDS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816465|sp|Q3Z4W6|CLPP_SHISS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243134|sp|Q0TKK4|CLPP_ECOL5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|116243136|sp|Q1RF98|CLPP_ECOUT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Flags: Precursor
gi|122957620|sp|Q0T7E6|CLPP_SHIF8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201821|sp|A1A8A6|CLPP_ECOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008648|sp|A7ZIJ5|CLPP_ECO24 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008649|sp|A7ZX95|CLPP_ECOHS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082457|sp|B1J011|CLPP_ECOLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|310942734|pdb|3MT6|R Chain R, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942735|pdb|3MT6|S Chain S, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942736|pdb|3MT6|T Chain T, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942737|pdb|3MT6|U Chain U, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942738|pdb|3MT6|O Chain O, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942739|pdb|3MT6|P Chain P, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942740|pdb|3MT6|Q Chain Q, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942741|pdb|3MT6|Y Chain Y, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942742|pdb|3MT6|Z Chain Z, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942743|pdb|3MT6|AA Chain a, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942744|pdb|3MT6|BB Chain b, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942745|pdb|3MT6|V Chain V, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942746|pdb|3MT6|W Chain W, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942747|pdb|3MT6|X Chain X, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942748|pdb|3MT6|M Chain M, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942749|pdb|3MT6|L Chain L, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942750|pdb|3MT6|K Chain K, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942751|pdb|3MT6|J Chain J, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942752|pdb|3MT6|I Chain I, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942753|pdb|3MT6|H Chain H, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942754|pdb|3MT6|N Chain N, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942755|pdb|3MT6|F Chain F, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942756|pdb|3MT6|E Chain E, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942757|pdb|3MT6|D Chain D, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942758|pdb|3MT6|C Chain C, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942759|pdb|3MT6|B Chain B, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942760|pdb|3MT6|A Chain A, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|310942761|pdb|3MT6|G Chain G, Structure Of Clpp From Escherichia Coli In Complex With
Adep1
gi|12513299|gb|AAG54787.1|AE005223_2 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Escherichia coli O157:H7 str.
EDL933]
gi|26106846|gb|AAN79031.1|AE016756_214 ATP-dependent Clp protease proteolytic subunit [Escherichia coli
CFT073]
gi|145556|gb|AAA23588.1| ATP-dependent protease (clpP) [Escherichia coli]
gi|1773121|gb|AAB40193.1| ATP-dependent Clp proteinase [Escherichia coli]
gi|1786641|gb|AAC73540.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. MG1655]
gi|13359948|dbj|BAB33914.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli O157:H7 str. Sakai]
gi|30040183|gb|AAP15916.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str.
2457T]
gi|56383209|gb|AAN42038.2| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Shigella flexneri 2a str. 301]
gi|73854489|gb|AAZ87196.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella sonnei Ss046]
gi|81239804|gb|ABB60514.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella dysenteriae Sd197]
gi|81244336|gb|ABB65044.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella boydii Sb227]
gi|85674577|dbj|BAE76217.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K12 substr. W3110]
gi|91071085|gb|ABE05966.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Escherichia coli UTI89]
gi|110342290|gb|ABG68527.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
536]
gi|110614013|gb|ABF02680.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease
[Shigella flexneri 5 str. 8401]
gi|115511821|gb|ABI99895.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Escherichia coli APEC O1]
gi|157065644|gb|ABV04899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli HS]
gi|157080329|gb|ABV20037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E24377A]
gi|169756118|gb|ACA78817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli ATCC 8739]
gi|169887858|gb|ACB01565.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli str. K-12 substr. DH10B]
gi|170520994|gb|ACB19172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli SMS-3-5]
gi|187428295|gb|ACD07569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii CDC 3083-94]
gi|187766815|gb|EDU30659.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4196]
gi|188487796|gb|EDU62899.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 53638]
gi|189003087|gb|EDU72073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4076]
gi|189358046|gb|EDU76465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4401]
gi|189362475|gb|EDU80894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4486]
gi|189373600|gb|EDU92016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC869]
gi|190905047|gb|EDV64714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli F11]
gi|192929158|gb|EDV82768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E22]
gi|208729341|gb|EDZ78942.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4206]
gi|208732507|gb|EDZ81195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4045]
gi|208737157|gb|EDZ84841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. EC4042]
gi|209743854|gb|ACI70234.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743856|gb|ACI70235.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743858|gb|ACI70236.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743860|gb|ACI70237.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209743862|gb|ACI70238.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease ClpP
[Escherichia coli]
gi|209910913|dbj|BAG75987.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE11]
gi|215263590|emb|CAS07920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O127:H6 str. E2348/69]
gi|217322633|gb|EEC31057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli O157:H7 str. TW14588]
gi|218350632|emb|CAU96324.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli 55989]
gi|218357436|emb|CAQ90075.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia fergusonii ATCC 35469]
gi|218359772|emb|CAQ97313.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI1]
gi|218364116|emb|CAR01781.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli S88]
gi|218368637|emb|CAR16376.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli IAI39]
gi|218425865|emb|CAR06671.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli ED1a]
gi|218430818|emb|CAR11692.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli UMN026]
gi|222032232|emb|CAP74971.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
LF82]
gi|227838638|gb|EEJ49104.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
83972]
gi|238863325|gb|ACR65323.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli BW2952]
gi|242376218|emb|CAQ30909.1| clpP, subunit of ClpP serine protease, ClpAP, ClpXP and ClpAXP
[Escherichia coli BL21(DE3)]
gi|253325618|gb|ACT30220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 'BL21-Gold(DE3)pLysS AG']
gi|253972407|gb|ACT38078.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli B
str. REL606]
gi|253976617|gb|ACT42287.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
BL21(DE3)]
gi|254591021|gb|ACT70382.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli O157:H7 str. TW14359]
gi|257752309|dbj|BAI23811.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O26:H11 str. 11368]
gi|257757785|dbj|BAI29282.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O103:H2 str. 12009]
gi|257762954|dbj|BAI34449.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O111:H- str. 11128]
gi|260450376|gb|ACX40798.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli DH1]
gi|281177608|dbj|BAI53938.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
SE15]
gi|281599777|gb|ADA72761.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
2002017]
gi|284920247|emb|CBG33306.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
042]
gi|290761217|gb|ADD55178.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. CB9615]
gi|291429411|gb|EFF02431.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1412]
gi|291471765|gb|EFF14248.1| Clp protease [Escherichia coli B354]
gi|294492533|gb|ADE91289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli IHE3034]
gi|298280283|gb|EFI21787.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
FVEC1302]
gi|299880021|gb|EFI88232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 196-1]
gi|300404590|gb|EFJ88128.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 84-1]
gi|300414631|gb|EFJ97941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 115-1]
gi|300452510|gb|EFK16130.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 116-1]
gi|300461832|gb|EFK25325.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 187-1]
gi|300527102|gb|EFK48171.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 119-7]
gi|300529122|gb|EFK50184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 107-1]
gi|300843357|gb|EFK71117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 78-1]
gi|305853859|gb|EFM54298.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
NC101]
gi|306907687|gb|EFN38189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli W]
gi|307552344|gb|ADN45119.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
ABU 83972]
gi|307628093|gb|ADN72397.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
UM146]
gi|308121483|gb|EFO58745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 145-7]
gi|309700698|emb|CBI99994.1| ATP-dependent clp protease proteolytic subunit [Escherichia coli
ETEC H10407]
gi|312945015|gb|ADR25842.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O83:H1 str. NRG 857C]
gi|315059717|gb|ADT74044.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Escherichia coli W]
gi|315135119|dbj|BAJ42278.1| conserved hypothetical protein [Escherichia coli DH1]
gi|320173743|gb|EFW48926.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|320178281|gb|EFW53255.1| ATP-dependent Clp protease proteolytic subunit [Shigella boydii
ATCC 9905]
gi|320186067|gb|EFW60812.1| ATP-dependent Clp protease proteolytic subunit [Shigella flexneri
CDC 796-83]
gi|320192853|gb|EFW67493.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. EC1212]
gi|320197089|gb|EFW71708.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
gi|320201681|gb|EFW76257.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
EC4100B]
gi|320638432|gb|EFX08146.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. G5101]
gi|320643812|gb|EFX12935.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. 493-89]
gi|320649163|gb|EFX17741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H- str. H 2687]
gi|320656056|gb|EFX23972.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320661206|gb|EFX28637.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O55:H7 str. USDA 5905]
gi|320665182|gb|EFX32275.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. LSU-61]
gi|323379718|gb|ADX51986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli KO11]
gi|323938623|gb|EGB34872.1| Clp protease [Escherichia coli E1520]
gi|323943244|gb|EGB39400.1| Clp protease [Escherichia coli E482]
gi|323945342|gb|EGB41398.1| Clp protease [Escherichia coli H120]
gi|323952951|gb|EGB48819.1| Clp protease [Escherichia coli H252]
gi|323958630|gb|EGB54333.1| Clp protease [Escherichia coli H263]
gi|323963427|gb|EGB58989.1| Clp protease [Escherichia coli H489]
gi|323965124|gb|EGB60583.1| Clp protease [Escherichia coli M863]
gi|323972291|gb|EGB67501.1| Clp protease [Escherichia coli TA007]
gi|323976078|gb|EGB71171.1| Clp protease [Escherichia coli TW10509]
gi|324114664|gb|EGC08632.1| Clp protease [Escherichia fergusonii B253]
gi|324116925|gb|EGC10838.1| Clp protease [Escherichia coli E1167]
gi|326341201|gb|EGD64993.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
gi|326346024|gb|EGD69763.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1125]
gi|330910231|gb|EGH38741.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
AA86]
gi|331037755|gb|EGI09975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H736]
gi|331045775|gb|EGI17901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M605]
gi|331051116|gb|EGI23168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli M718]
gi|331054742|gb|EGI26751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA206]
gi|331060240|gb|EGI32204.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA143]
gi|331066016|gb|EGI37900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA271]
gi|331070973|gb|EGI42332.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli TA280]
gi|331076167|gb|EGI47449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H591]
gi|331081034|gb|EGI52199.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli H299]
Length = 207
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|325292625|ref|YP_004278489.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|325060478|gb|ADY64169.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
Length = 210
Score = 249 bits (635), Expect = 3e-64, Method: Composition-based stats.
Identities = 159/205 (77%), Positives = 185/205 (90%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ D + LVPMVVEQTNRGERSYDI+SRLLKERI+F+TG +ED MA+L+CAQLLFLE
Sbjct: 1 MKNPVDTAMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFI+P +ST C+GQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+T EEVEKTLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M A EA DWGV+DK+L SR ++E
Sbjct: 181 HFMDADEAKDWGVIDKILTSRQEME 205
>gi|330446593|ref|ZP_08310245.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490784|dbj|GAA04742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 207
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 165/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK+RLN + ++ G+ E +
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNGLLAEHTGQPLEII 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDAVLSKRD 207
>gi|238751006|ref|ZP_04612502.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
gi|238710696|gb|EEQ02918.1| ATP-dependent Clp protease proteolytic subunit [Yersinia rohdei
ATCC 43380]
Length = 207
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA +A ++G+VD V R
Sbjct: 179 ERDTERDRFLSAEQAVEYGLVDSVFTRRD 207
>gi|15888588|ref|NP_354269.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens str. C58]
gi|21759066|sp|Q8UFY6|CLPP2_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|15156306|gb|AAK87054.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
tumefaciens str. C58]
Length = 210
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 159/205 (77%), Positives = 185/205 (90%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ D + LVPMVVEQTNRGERSYDI+SRLLKERI+F+TG +ED MA+L+CAQLLFLE
Sbjct: 1 MKNPVDTAMALVPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDQMASLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFI+P +ST C+GQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+T EEVEKTLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M A EA DWGV+DK+L SR ++E
Sbjct: 181 HFMDADEAKDWGVIDKILTSRQEME 205
>gi|313887837|ref|ZP_07821517.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846180|gb|EFR33561.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 194
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLK+RI+F++G++ D MA LI AQLLFLEAE+P K+I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGEVNDTMADLIVAQLLFLEAEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG AIYDTM +IKP +ST C+G AASMG+ LL++G KG RFALPN+ I
Sbjct: 61 QLYINSPGGSVSAGFAIYDTMNYIKPDVSTICIGMAASMGAFLLASGAKGKRFALPNSDI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ +A+ I+KI+ +LNEI + G+ E++EK DRD+ +++ EA
Sbjct: 121 MIHQPSGGAQGQASDIQINAEKILKIRHKLNEILAERTGQDLEKIEKDTDRDYWLNSQEA 180
Query: 196 CDWGVVDKVLMSR 208
D+G++DKV+ R
Sbjct: 181 KDYGLIDKVIEKR 193
>gi|149201013|ref|ZP_01877988.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
TM1035]
gi|149145346|gb|EDM33372.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
TM1035]
Length = 210
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 131/210 (62%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT+RGER+YDI+SRLLKERI+F++G + D M++LI AQLL L
Sbjct: 1 MKDPMDIYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEPGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HA++ K+K RLNEIYVK+ G+T ++VE+ L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHARETQKLKDRLNEIYVKHTGQTLKKVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ MS EA WG++D+++ +R +E +K
Sbjct: 181 DNFMSPEEAKAWGLIDEIVANRDKGDEAAK 210
>gi|146341127|ref|YP_001206175.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
ORS278]
gi|146193933|emb|CAL77950.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS278]
Length = 210
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 136/203 (66%), Positives = 172/203 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED MATLI AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMATLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+G+AIYDTMQFI+P +ST C GQAASMGSLLL AG K MR
Sbjct: 61 AENPKKEIAMYINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLCAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+ Y+ +E L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQPYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
++A A ++G++DKVL R +
Sbjct: 181 KFLTAEAAQEFGLIDKVLDKRPE 203
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 120/199 (60%), Positives = 160/199 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVP+V+EQT RGER+YDIYSRLLK+RI+ + I+DH+A LI AQLLFLEAE+P
Sbjct: 2 DKILNQLVPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I +YINSPGGVVTAG AIYDTM +IKP + T C+GQAASMG+ LLSAG KG R++LP
Sbjct: 62 EKDIYMYINSPGGVVTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI++HQP GGF GQA+DIE HA++I+++KR LNE K+ G+ E++E +RD+ MS
Sbjct: 122 NARIMIHQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++DKV+ R +
Sbjct: 182 AEEAKEYGLIDKVIYKRGE 200
>gi|114777030|ref|ZP_01452050.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
gi|114552551|gb|EAU55011.1| ATP-dependent Clp protease proteolytic subunit [Mariprofundus
ferrooxydans PV-1]
Length = 207
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 162/195 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGER+YDI+SRLLKERIVF+ GQ++DH A LI AQLLFLE+E P K+I
Sbjct: 1 MNLVPTVVEQTSRGERAYDIFSRLLKERIVFLNGQVDDHTANLIIAQLLFLESEGPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVT+G+AIYDTMQ+I+ +ST C+GQAASMG+ LL++G G RF+LPN+RI
Sbjct: 61 YMYINSPGGVVTSGLAIYDTMQYIRCDVSTLCIGQAASMGAHLLASGAPGKRFSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+ +K RLNE+ K+ G+ E++ ++RD+ ++A +A
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILSLKNRLNEMMAKHTGQPIEKLADDVERDYFLTADQA 180
Query: 196 CDWGVVDKVLMSRID 210
C++G+VDKVL SR +
Sbjct: 181 CEYGLVDKVLSSRAE 195
>gi|120610146|ref|YP_969824.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax citrulli
AAC00-1]
gi|326316315|ref|YP_004233987.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|166201794|sp|A1TM62|CLPP_ACIAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120588610|gb|ABM32050.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax
citrulli AAC00-1]
gi|323373151|gb|ADX45420.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 202
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 118/202 (58%), Positives = 156/202 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLKERIVF+ G++ D A L+ AQLLFLE
Sbjct: 1 MSALETQALGMIPMVIEQSGRGERSYDIYSRLLKERIVFLIGEVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN++I++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD
Sbjct: 121 FSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ ++A EA ++G+VD+V+ R
Sbjct: 181 YFLTADEAKEYGLVDQVVTQRP 202
>gi|254507754|ref|ZP_05119885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
gi|219549279|gb|EED26273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus 16]
Length = 208
Score = 248 bits (634), Expect = 3e-64, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ M+A +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMAAEQAVEYGLVDAVLSHRGE 208
>gi|153839648|ref|ZP_01992315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|260902813|ref|ZP_05911208.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|149746838|gb|EDM57826.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ3810]
gi|308108649|gb|EFO46189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AQ4037]
gi|328473326|gb|EGF44174.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus 10329]
Length = 208
Score = 248 bits (634), Expect = 4e-64, Method: Composition-based stats.
Identities = 128/208 (61%), Positives = 164/208 (78%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +
Sbjct: 119 GGAAGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ DRD+ MSA +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMSAEQAVEYGIVDAVLSHR 206
>gi|153835695|ref|ZP_01988362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
harveyi HY01]
gi|156973712|ref|YP_001444619.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi ATCC
BAA-1116]
gi|269961045|ref|ZP_06175414.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi
1DA3]
gi|226706635|sp|A7MV87|CLPP_VIBHB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148867676|gb|EDL66952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
harveyi HY01]
gi|156525306|gb|ABU70392.1| hypothetical protein VIBHAR_01417 [Vibrio harveyi ATCC BAA-1116]
gi|269834264|gb|EEZ88354.1| ATP-dependent Clp protease proteolytic subunit [Vibrio harveyi
1DA3]
Length = 208
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 128/210 (60%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGIVDAVLSHRGE 208
>gi|260776382|ref|ZP_05885277.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
coralliilyticus ATCC BAA-450]
gi|260607605|gb|EEX33870.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
coralliilyticus ATCC BAA-450]
Length = 208
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ M+A +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMAADQAVEYGLVDAVLTHRGE 208
>gi|146310565|ref|YP_001175639.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317441|gb|ABP59588.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterobacter
sp. 638]
Length = 207
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYNG--ERDNIAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSILTHRN 207
>gi|224367556|ref|YP_002601719.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 115/200 (57%), Positives = 162/200 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQ+NRGER+YDIYSRLLK+RI+F+ ++D +A LI AQLLFLE+E+P+K+I
Sbjct: 1 MPLIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGGVVTAGMA+YDTMQ+IKP ++T C+GQAASMG+LLL+AG KG RF+LPN+RI
Sbjct: 61 NFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ A +I+++K L+ I K+ G+ ++++ + DRD MS +A
Sbjct: 121 MIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSGDQA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G+VD V+ SR ++E+
Sbjct: 181 KEYGLVDHVVASRDELEKAE 200
>gi|91228617|ref|ZP_01262535.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|254229904|ref|ZP_04923307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262394815|ref|YP_003286669.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269965580|ref|ZP_06179694.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
gi|91187849|gb|EAS74163.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 12G01]
gi|151937540|gb|EDN56395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio sp.
Ex25]
gi|262338409|gb|ACY52204.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. Ex25]
gi|269829805|gb|EEZ84040.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
alginolyticus 40B]
Length = 208
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MS+ +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMSSEQAVEYGIVDAVLSHRGE 208
>gi|332141945|ref|YP_004427683.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
gi|327551967|gb|AEA98685.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii str. 'Deep ecotype']
Length = 209
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 164/209 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVPMVVEQT++GERSYDIYSRLLKE ++F+ GQ+EDHMA LI AQ+LFL
Sbjct: 1 MTNTPFDPMNALVPMVVEQTSKGERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+I LYINSPGG VTAGMAIYDTM+FIKP +ST CMGQAASMG+ LLSAG KG
Sbjct: 61 EAENPEKDIFLYINSPGGSVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLSAGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPN+R+++HQP GGF GQASD E HA++I+ IK +LN + + G+ YE+V + DR
Sbjct: 121 RYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLLADHTGQDYEKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ +SA+EA ++G+VD+VL +R D+
Sbjct: 181 DNFLSATEAKEYGLVDQVLANRSDVAATK 209
>gi|326626794|gb|EGE33137.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 9]
Length = 246
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 40 MSYSGEL--DNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 97
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 98 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 157
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 158 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 217
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 218 ERDTERDRFLSAPEAVEYGLVDSILTHRN 246
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 154/201 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMV+EQT+RGER++DIYSRLLK+RIVF+ I+D A L+ AQLLFLE+E+P K+I
Sbjct: 1 MPLIPMVIEQTSRGERAFDIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG V+AGMAIYDTMQ+IK I+T C+G AASMG+ LL+AG KG RF+LPN+RI
Sbjct: 61 NFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI A++I+++K LN+I + GK E+++ DRD MS EA
Sbjct: 121 MIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMSGEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G+VD V+ R D+++ K
Sbjct: 181 KAYGIVDHVITDRSDLDKLEK 201
>gi|170767754|ref|ZP_02902207.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
gi|170123242|gb|EDS92173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
albertii TW07627]
Length = 207
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|49474139|ref|YP_032181.1| ATP-dependent Clp protease proteolytic subunit [Bartonella quintana
str. Toulouse]
gi|67460275|sp|Q6G178|CLPP_BARQU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49239643|emb|CAF26003.1| ATP-dependent clp protease proteolytic subunit [Bartonella quintana
str. Toulouse]
Length = 210
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 150/209 (71%), Positives = 179/209 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ L LVPMV+EQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSNPMKTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYV++ G+ YE +E+TLDRD
Sbjct: 121 FTLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQDYEVIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G+VD V+ R + E++ K
Sbjct: 181 HFMTAEEAKQFGLVDDVIQYRAETEKEEK 209
>gi|157962502|ref|YP_001502536.1| ATP-dependent Clp protease proteolytic subunit [Shewanella pealeana
ATCC 700345]
gi|189082466|sp|A8H614|CLPP_SHEPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157847502|gb|ABV88001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
pealeana ATCC 700345]
Length = 203
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 126/202 (62%), Positives = 159/202 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHKAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G +G
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA+EA ++G+VD V+ R
Sbjct: 181 DNFMSATEAAEYGLVDSVIAKR 202
>gi|212636027|ref|YP_002312552.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
piezotolerans WP3]
gi|226706473|sp|B8CRF7|CLPP_SHEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212557511|gb|ACJ29965.1| Peptidase S14, ClpP [Shewanella piezotolerans WP3]
Length = 203
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 127/202 (62%), Positives = 158/202 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHKAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G +G
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPIEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA EA ++G+VD VL R
Sbjct: 181 DNFMSADEAAEYGLVDSVLAKR 202
>gi|159043937|ref|YP_001532731.1| ATP-dependent Clp protease proteolytic subunit [Dinoroseobacter
shibae DFL 12]
gi|189082456|sp|A8LJA8|CLPP_DINSH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157911697|gb|ABV93130.1| endopeptidase Clp [Dinoroseobacter shibae DFL 12]
Length = 208
Score = 248 bits (633), Expect = 4e-64, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D D ++ LVPMVVEQT+RGER+YDI+SRLLKERIVFV G + D M+ L+ AQLL LE
Sbjct: 1 MHDPVDTYMNLVPMVVEQTSRGERAYDIFSRLLKERIVFVNGPVHDGMSQLVVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGG+ GQA+DI HAQ+ K+K RLN+IYVK+ G+ ++V L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGYQGQATDIMIHAQETQKLKDRLNQIYVKHTGQPLKKVVDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ M A +A +WG++D+++ SR + E+ SK
Sbjct: 181 NFMDAEQAKEWGLIDEIVESRAN-EDTSK 208
>gi|167624686|ref|YP_001674980.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
halifaxensis HAW-EB4]
gi|189082465|sp|B0TLU9|CLPP_SHEHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167354708|gb|ABZ77321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
halifaxensis HAW-EB4]
Length = 203
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 126/203 (62%), Positives = 159/203 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHKAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G +G
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ MSA+EA ++G+VD V+ R
Sbjct: 181 DNFMSATEAAEYGLVDSVIAKRS 203
>gi|23501987|ref|NP_698114.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis 1330]
gi|38257636|sp|Q8G0I4|CLPP_BRUSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|23347937|gb|AAN30029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
1330]
Length = 209
Score = 248 bits (633), Expect = 5e-64, Method: Composition-based stats.
Identities = 148/209 (70%), Positives = 182/209 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQLLFLE
Sbjct: 1 MRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +E+TLDRD
Sbjct: 121 YALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA ++G++DKV+ R ++SK
Sbjct: 181 HFMTAQEALEFGLIDKVVEVRDVSADESK 209
>gi|251790648|ref|YP_003005369.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
gi|247539269|gb|ACT07890.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya zeae
Ech1591]
Length = 207
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 134/209 (64%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--EQEKLAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G+ E +
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQPLEMI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA+EA D+G+VD VL R
Sbjct: 179 ERDTERDRFLSAAEAVDYGLVDSVLTHRE 207
>gi|15641924|ref|NP_231556.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|147674197|ref|YP_001217455.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae
O395]
gi|153824129|ref|ZP_01976796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae B33]
gi|153826398|ref|ZP_01979065.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae MZO-2]
gi|227082052|ref|YP_002810603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae M66-2]
gi|254286858|ref|ZP_04961810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae AM-19226]
gi|18203199|sp|Q9KQS6|CLPP_VIBCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172047646|sp|A5F6X0|CLPP_VIBC3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763808|sp|C3LNM6|CLPP_VIBCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|9656458|gb|AAF95070.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|126518348|gb|EAZ75571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae B33]
gi|146316080|gb|ABQ20619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae O395]
gi|149739876|gb|EDM54067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae MZO-2]
gi|150423008|gb|EDN14957.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae AM-19226]
gi|227009940|gb|ACP06152.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae M66-2]
gi|227013820|gb|ACP10030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae O395]
Length = 200
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 126/199 (63%), Positives = 160/199 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+F LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 2 SPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R+ LP
Sbjct: 62 DKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++ G+ E +E+ DRD+ MS
Sbjct: 122 NSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A +A ++G+VD VL R +
Sbjct: 182 ADQAVEYGLVDAVLKHRGE 200
>gi|49475380|ref|YP_033421.1| ATP-dependent Clp protease proteolytic subunit [Bartonella henselae
str. Houston-1]
gi|67460276|sp|Q6G3Z3|CLPP_BARHE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49238186|emb|CAF27396.1| ATP-dependent clp protease proteolytic subunit [Bartonella henselae
str. Houston-1]
Length = 210
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 149/209 (71%), Positives = 179/209 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMV+EQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSDPIKTALSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPNARI++HQPSGGF GQASDIERHAQDI+K+K+RLNEIYV++ G+ Y+ +E+TLDRD
Sbjct: 121 FTLPNARIMVHQPSGGFQGQASDIERHAQDIIKMKQRLNEIYVQHTGQNYDVIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G+VD V+ R + E++ K
Sbjct: 181 HFMTAEEAKQFGLVDDVIQYRAETEKEEK 209
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 118/200 (59%), Positives = 157/200 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQTNRGERSYDIYSRLLK+RI+F+ I+D +A L+ AQLLFLEAE+P K+
Sbjct: 1 MSYLVPMVVEQTNRGERSYDIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG +TAGMAIYDT+Q+I+P +ST C+G AASMG+ LL+AG+KG R+ALPNA
Sbjct: 61 ISLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP+GG GQA+DIE HA+ I+ +K LN+I + G+ E ++K DRD+ M+A E
Sbjct: 121 IMIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQE 180
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A ++G++D+V+ +K
Sbjct: 181 AKEYGIIDEVISHPKKTSKK 200
>gi|237745591|ref|ZP_04576071.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
gi|229376942|gb|EEO27033.1| ATP-dependent Clp protease [Oxalobacter formigenes HOxBLS]
Length = 207
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 121/198 (61%), Positives = 160/198 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LG++PMV+EQ+ RGER++DIYSRLLKERI+F+ G + D A LI AQLLFLE+ENP
Sbjct: 10 DTSMLGMIPMVIEQSGRGERAFDIYSRLLKERIIFLVGPVTDQNANLIVAQLLFLESENP 69
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGG V+AGMAIYDTMQFI+P +ST C G AASMG+ LL+AG KG RF+LP
Sbjct: 70 EKDISLYINSPGGSVSAGMAIYDTMQFIRPQVSTLCTGLAASMGAFLLAAGAKGKRFSLP 129
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGG GQA+DIE HA++I+ ++ RLN I +N GK E++ + +RD+ MS
Sbjct: 130 NSRIMIHQPSGGAQGQATDIEIHAREILYLRERLNGILAENTGKPVEQIARDTERDNFMS 189
Query: 192 ASEACDWGVVDKVLMSRI 209
A+EA D+G++D+VL R
Sbjct: 190 AAEAKDYGLIDEVLTRRN 207
>gi|260773194|ref|ZP_05882110.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
gi|260612333|gb|EEX37536.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
metschnikovii CIP 69.14]
Length = 208
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 125/210 (59%), Positives = 164/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLK+R++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTLCVGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++ G+ + +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILSIKNKLNTLLAEHTGQPLDVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A D+G+VD +L R +
Sbjct: 179 ERDTDRDNFMSAQQAVDYGIVDAILTHRGE 208
>gi|260222837|emb|CBA32804.1| ATP-dependent Clp protease proteolytic subunit [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 220
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 116/209 (55%), Positives = 159/209 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ + E LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G + D A L+
Sbjct: 12 MNVKYGMSGAMETQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVV 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+IS YINSPGG V+AGMAIYDTM FIKP +ST C G AASMG+ LL+
Sbjct: 72 AQLLFLESENPDKDISFYINSPGGSVSAGMAIYDTMNFIKPDVSTLCTGMAASMGAFLLA 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF+LPN+++++HQP GG GQA++IE HA++I+K + +LN+I + G+ E++
Sbjct: 132 AGAKGKRFSLPNSKVMIHQPLGGTQGQATEIEIHAREILKTREQLNKILAERTGQPLEKI 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD+ +SA EA ++G+VD+V+ R
Sbjct: 192 ERDTERDYYLSADEAKEYGLVDQVIAKRP 220
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
Length = 197
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 125/196 (63%), Positives = 162/196 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT++GERSYDIYSRLLKERI+F+ GQ+ED+MA LI AQLLFLEAE+P+K+I
Sbjct: 1 MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQAASMG+ LLSAG KG RFALP+ARI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A++I+++K L ++ G++YE+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++DKVL SR ++
Sbjct: 181 AEYGLIDKVLTSRSEV 196
>gi|31340017|sp|Q8DG26|CLPP_VIBVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389705|sp|Q7MMG7|CLPP_VIBVY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 200
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 7 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R+ LPN+R++
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLPNSRVM 126
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDI+ HAQ+I+ IK +LN++ ++ G+ E +E+ DRD+ MSA +A
Sbjct: 127 IHQPLGGFQGQASDIQIHAQEILTIKTKLNKLLAEHTGQPLEVIERDTDRDNFMSADQAV 186
Query: 197 DWGVVDKVLMSRI 209
++G+VD VL R
Sbjct: 187 EYGLVDAVLTHRS 199
>gi|194595677|gb|ACF77120.1| ATP-dependent Clp protease proteolytic subunit [Azospirillum
brasilense]
Length = 210
Score = 248 bits (632), Expect = 5e-64, Method: Composition-based stats.
Identities = 126/200 (63%), Positives = 164/200 (82%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D E LVPMV+EQTNRGER+YDIYSRLLKERI+F+ G + D +A+LIC+QLLFLE+E
Sbjct: 3 DFEPKMNALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I+LYINSPGG V+AG+AIYDTMQ+I+P +ST CMGQAASMGSLLL+AG G RF+
Sbjct: 63 NPSKDIALYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFS 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQPSGG GQASDIE AQ+I+K++ RLN+IYVK+ G++ + +E ++RD
Sbjct: 123 LPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAAMERDKF 182
Query: 190 MSASEACDWGVVDKVLMSRI 209
MS EA +G++D+V+ R
Sbjct: 183 MSPEEAKAFGLIDEVVEKRP 202
>gi|325294216|ref|YP_004280730.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
gi|325064664|gb|ADY72671.1| ATP-dependent Clp protease proteolytic subunit [Desulfurobacterium
thermolithotrophum DSM 11699]
Length = 200
Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 123/199 (61%), Positives = 164/199 (82%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E++ VP+V+EQT RGER+YDIYSRLLK+RI+ + I+DH+A LI AQLLFLEAE+P
Sbjct: 2 EEILNQFVPIVIEQTGRGERAYDIYSRLLKDRIIMLGTPIDDHVANLIVAQLLFLEAEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGGVVTAG+AIYDTMQ+IKP + T C+GQAASMG++LL+AG KG RFALP
Sbjct: 62 EKDIYLYINSPGGVVTAGLAIYDTMQYIKPDVVTICLGQAASMGAVLLAAGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ARI++HQP GGF GQA+DIE HA++I+++K+ LNEI K+ G++ ++EK +RD+ MS
Sbjct: 122 HARIMIHQPLGGFQGQATDIEIHAKEILRLKKMLNEILSKHTGQSLRKIEKDTERDYFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA +G++DKVL R +
Sbjct: 182 AEEAQKYGLIDKVLTRRGE 200
>gi|261253459|ref|ZP_05946032.1| ATP-dependent Clp protease proteolytic subunit [Vibrio orientalis
CIP 102891]
gi|260936850|gb|EEX92839.1| ATP-dependent Clp protease proteolytic subunit [Vibrio orientalis
CIP 102891]
Length = 208
Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNTMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ M+A +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMAADQAVEYGLVDAVLTHRGE 208
>gi|54309798|ref|YP_130818.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum SS9]
gi|46914236|emb|CAG21016.1| putative gi|27363512|ref|NP_759040.1| ATP-dependent Clp protease,
proteolytic subunit [Vibrio vulnificus CMCP6]
[Photobacterium profundum SS9]
Length = 207
Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 163/209 (77%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ + + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--ERNAMSPITDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+ IK RLN + K+ G+ E V
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVV 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E DRD+ MSA +A ++G+VD VL R
Sbjct: 179 EGDTDRDNFMSADQAVEYGLVDSVLTQRD 207
>gi|271499597|ref|YP_003332622.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
gi|270343152|gb|ACZ75917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech586]
Length = 207
Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+ED+MA LI
Sbjct: 1 MSYSG--EQEKLAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDYMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G++ + +
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA+EA ++G+VD VL R
Sbjct: 179 ERDTERDRFLSAAEAVEYGLVDSVLTHRE 207
>gi|323498276|ref|ZP_08103278.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis
DSM 21326]
gi|323316704|gb|EGA69713.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sinaloensis
DSM 21326]
Length = 208
Score = 248 bits (632), Expect = 6e-64, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 166/210 (79%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ M+A +A ++G+VD VL R +
Sbjct: 179 ERDTDRDNFMAADQAVEYGLVDAVLSHRGE 208
>gi|119384010|ref|YP_915066.1| endopeptidase Clp [Paracoccus denitrificans PD1222]
gi|119373777|gb|ABL69370.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paracoccus
denitrificans PD1222]
Length = 209
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 133/209 (63%), Positives = 173/209 (82%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F++G + D MATLI AQLLFL
Sbjct: 1 MQDPAEFYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLSGPVHDGMATLISAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP K+IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL AG+ G
Sbjct: 61 EAENPTKDISMYINSPGGVVTSGLSIYDTMQYIKPRVSTLVVGQAASMGSLLLCAGQPGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGGF GQA+DI HA++ K+KRRLNEIYVK+ G+T EEVE+ L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGFQGQATDILIHARETEKLKRRLNEIYVKHTGRTLEEVEQALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D MS EA +WG++D++L++R E
Sbjct: 181 DRFMSPEEAKEWGLIDEILVARGKAEPDK 209
>gi|163759316|ref|ZP_02166402.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
gi|162283720|gb|EDQ34005.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
Length = 210
Score = 247 bits (631), Expect = 6e-64, Method: Composition-based stats.
Identities = 157/209 (75%), Positives = 184/209 (88%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ D + LVPMVVEQTNRGERSYDI+SRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MTNPVDTAMALVPMVVEQTNRGERSYDIFSRLLKERIIFITGPVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP IST C+GQAASMGSLLL AGEKGMR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAISTLCVGQAASMGSLLLCAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNAR+++HQPSGGF GQASDIERHAQDI+K+KRRLNE+YVK+ G+ YE VEKTLDRD
Sbjct: 121 FATPNARVMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEVYVKHTGQDYETVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA ++G++D+V R +IE ++
Sbjct: 181 HFMTAEEALEFGLIDRVFDKRENIEAPAE 209
>gi|317492909|ref|ZP_07951333.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919031|gb|EFV40366.1| Clp protease [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 206
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 133/208 (63%), Positives = 168/208 (80%), Gaps = 3/208 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSGERDLAP---HMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIV 57
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 58 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 117
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ GK EE+
Sbjct: 118 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHSGKPLEEI 177
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD +SA EA ++G+VD V+ R
Sbjct: 178 ERDTERDRFLSADEAVEYGLVDSVMTHR 205
>gi|311280666|ref|YP_003942897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
gi|308749861|gb|ADO49613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cloacae SCF1]
Length = 207
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 128/209 (61%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G++ ++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLAQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E +RD +SA EA ++G+VD +L R
Sbjct: 179 ESDTERDRFLSAPEAVEYGLVDSILTHRK 207
>gi|91793847|ref|YP_563498.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
denitrificans OS217]
gi|123356647|sp|Q12LA1|CLPP_SHEDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91715849|gb|ABE55775.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
denitrificans OS217]
Length = 203
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 128/203 (63%), Positives = 161/203 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHKAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G KG
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLAEHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ MSA++A D+G+VD +L SR
Sbjct: 181 DNFMSATQAMDYGLVDSLLTSRS 203
>gi|121605848|ref|YP_983177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
gi|120594817|gb|ABM38256.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 216
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 125/207 (60%), Positives = 158/207 (76%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ E LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G + D A L+ AQ
Sbjct: 10 YNSPQAASQEIQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQ 69
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C+G AASMG+ LLS+G
Sbjct: 70 LLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMAASMGAFLLSSG 129
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG RF+LPN+R+++HQPSGG GQASDIE HA+DI+K + +LN I N G+T E++E+
Sbjct: 130 TKGKRFSLPNSRVMIHQPSGGAQGQASDIEIHARDILKTRDQLNRILAHNTGQTVEKIER 189
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
+RD+ M A EA +GVVD+V+ R
Sbjct: 190 DTERDYFMFADEAKAYGVVDQVISKRP 216
>gi|319405542|emb|CBI79161.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella sp. AR
15-3]
Length = 210
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 148/209 (70%), Positives = 180/209 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D L LVPMV+EQTNRGER+YDI+SRLLKERI+F+ G +ED+MA L+CAQLLFLE
Sbjct: 1 MRDPTKKVLSLVPMVIEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGG+VT+GMAIYDTMQFI+P +ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINLYINSPGGMVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGAAGRR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYV++ G+ YE +EKTLDRD
Sbjct: 121 FALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQNYEVIEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G++D V+ R + E++ K
Sbjct: 181 HFMTAEEAKQFGLIDDVIQYRAETEKEEK 209
>gi|293392545|ref|ZP_06636865.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
gi|291424947|gb|EFE98156.1| ATP-dependent Clp protease proteolytic subunit [Serratia odorifera
DSM 4582]
Length = 207
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--EQDQFAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAE+P+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAESPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G++ E++
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ +RD M+A E+ ++G+VD +L R
Sbjct: 179 DRDTERDRFMTAEESVEYGLVDGILTHRS 207
>gi|119774361|ref|YP_927101.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
amazonensis SB2B]
gi|171704645|sp|A1S4X5|CLPP_SHEAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119766861|gb|ABL99431.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
amazonensis SB2B]
Length = 202
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 130/202 (64%), Positives = 161/202 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
E VF LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHNAPESVFNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP KEI LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQA SMG+ LL+ GEKGM
Sbjct: 61 ESENPDKEIYLYINSPGGSVTAGMAIYDTMQFIKPKVSTVCIGQACSMGAFLLAGGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ + G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHTGQPMEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA++A ++G++D VL SR
Sbjct: 181 DNFMSATQAVEYGLIDSVLTSR 202
>gi|60389653|sp|Q6LNW0|CLPP_PHOPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 199
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 128/193 (66%), Positives = 157/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 7 ALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENPDKDIF 66
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G KG R+ LPN+R++
Sbjct: 67 LYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGKRYCLPNSRVM 126
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDI+ HA++I+ IK RLN + K+ G+ E VE DRD+ MSA +A
Sbjct: 127 IHQPLGGFQGQASDIQIHAKEILTIKHRLNSLLAKHTGQPLEVVEGDTDRDNFMSADQAV 186
Query: 197 DWGVVDKVLMSRI 209
++G+VD VL R
Sbjct: 187 EYGLVDSVLTQRD 199
>gi|238764860|ref|ZP_04625801.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
gi|238696967|gb|EEP89743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
Length = 207
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA +A ++G+VD V R
Sbjct: 179 ERDTERDRFLSAEQAVEYGLVDSVFTRRD 207
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 247 bits (631), Expect = 7e-64, Method: Composition-based stats.
Identities = 125/196 (63%), Positives = 162/196 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT++GERSYDIYSRLLKERI+F+ GQ+ED+MA LI AQLLFLEAE+P+K+I
Sbjct: 1 MALVPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQAASMG+ LLSAG KG RFALP+ARI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A++I+++K L ++ G++YE+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLKATLTHRMAEHSGQSYEKVLADTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++DKVL SR ++
Sbjct: 181 AEYGLIDKVLTSRSEV 196
>gi|319789118|ref|YP_004150751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
gi|317113620|gb|ADU96110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovibrio
ammonificans HB-1]
Length = 200
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 126/197 (63%), Positives = 163/197 (82%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E++ VP+V+EQT RGER+YDIYSRLLK+RIV + I+DH+A LI AQLLFLEAE+P
Sbjct: 2 EEILNQFVPIVIEQTGRGERAYDIYSRLLKDRIVMLGTPIDDHVANLIVAQLLFLEAEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGGVVTAG+AIYDTMQ+IKP + T CMGQAASMG++LL+AG KG RFALP
Sbjct: 62 EKDIYLYINSPGGVVTAGLAIYDTMQYIKPDVVTICMGQAASMGAVLLAAGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ARI++HQP GGF GQA+DIE HA++I+++KR LNEI K+ + E+VE+ +RD+ MS
Sbjct: 122 HARIMIHQPLGGFQGQATDIEIHAKEILRLKRMLNEILAKHTRQPVEKVEQDTERDYFMS 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA ++G++DKVL R
Sbjct: 182 AEEAKEYGLIDKVLTRR 198
>gi|241764198|ref|ZP_04762232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
gi|241366475|gb|EER60979.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
delafieldii 2AN]
Length = 202
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 115/202 (56%), Positives = 156/202 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE
Sbjct: 1 MSALETQGLGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG VTAGM+IYDTMQFIKP +ST C+G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVTAGMSIYDTMQFIKPDVSTLCVGFAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+++++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD
Sbjct: 121 FSLPNSKVMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKADTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ ++A EA D+G++D+V+ R
Sbjct: 181 YFLTADEAKDYGIIDQVIHKRP 202
>gi|205351759|ref|YP_002225560.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
gi|205271540|emb|CAR36358.1| ATP-dependent clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Gallinarum str. 287/91]
Length = 207
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSGEL--DNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSAPEAVEYGLVDSILTHRN 207
>gi|310816210|ref|YP_003964174.1| Protease subunit of ATP-dependent Clp protease [Ketogulonicigenium
vulgare Y25]
gi|308754945|gb|ADO42874.1| Protease subunit of ATP-dependent Clp protease [Ketogulonicigenium
vulgare Y25]
Length = 207
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 131/207 (63%), Positives = 174/207 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+FV+G +ED M+ LI AQLL LE
Sbjct: 1 MRDPVETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGVVEDGMSQLIVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AGE GMR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLAAGEAGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LPN+R+++HQPSGGF GQ +DI HA++ K+KRRLNEIYVK+ G++YE VE L+RD
Sbjct: 121 YSLPNSRVMVHQPSGGFQGQVTDIMIHARESEKLKRRLNEIYVKHTGQSYEAVEAALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ SA EA ++G++D++L R + EK
Sbjct: 181 NFKSAEEAKEFGLIDEILEKRGETPEK 207
>gi|163731525|ref|ZP_02138972.1| Clp protease, putative [Roseobacter litoralis Och 149]
gi|161394979|gb|EDQ19301.1| Clp protease, putative [Roseobacter litoralis Och 149]
Length = 208
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 128/207 (61%), Positives = 171/207 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
KD + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LE
Sbjct: 1 MKDPIETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
A+NP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMR
Sbjct: 61 ADNPAKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGG+ GQA+DI HA + K+K RLNEIYVK+ G+T ++VE L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGYQGQATDIMIHAAETQKLKDRLNEIYVKHTGQTLKKVENALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ MS EA D+G++D+++ +R + +
Sbjct: 181 NFMSPEEAKDFGLIDEIVENRSKDDAE 207
>gi|114563762|ref|YP_751275.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
frigidimarina NCIMB 400]
gi|122299288|sp|Q07ZX8|CLPP_SHEFN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114335055|gb|ABI72437.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
frigidimarina NCIMB 400]
Length = 203
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 125/202 (61%), Positives = 160/202 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MHNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST CMGQAASMG+ LL+ G KG
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCMGQAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HA++I+ IK +LN++ ++ G+ + +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLDIIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA++A ++G+VD +L SR
Sbjct: 181 DNFMSATQAVEYGIVDSLLTSR 202
>gi|294141768|ref|YP_003557746.1| ATP-dependent Clp protease, proteolytic subunit [Shewanella
violacea DSS12]
gi|293328237|dbj|BAJ02968.1| ATP-dependent Clp protease, proteolytic subunit [Shewanella
violacea DSS12]
Length = 203
Score = 247 bits (631), Expect = 8e-64, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 157/201 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ E V LVPMVVEQT +GERSYDIYSRLLKERI+F+ G +E+HMA L+ AQLLFL
Sbjct: 1 MQNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERIIFLVGPVEEHMANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G G
Sbjct: 61 ESESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPDVSTVCIGQAASMGAFLLAGGAAGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LNE+ ++ G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNEMLAEHTGQPLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D+ MSA++A ++G+VD V+
Sbjct: 181 DNFMSAAQAAEYGLVDSVMSK 201
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
Length = 206
Score = 247 bits (630), Expect = 8e-64, Method: Composition-based stats.
Identities = 114/205 (55%), Positives = 161/205 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
VPMVVE++NRGER+YDIYSRLLK+RIVFV G I+D++A ++ AQLLFLE+E+P
Sbjct: 2 NSYMNSYVPMVVERSNRGERAYDIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGGVVTAG+AIYDTMQ+I+P +ST C+GQAASMGSLLL+AG KG R+ALP
Sbjct: 62 DKDIHLYINSPGGVVTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG GQ++DI+ A++I++++ N+I K+ G+ E++ +RD+ M+
Sbjct: 122 LARIMIHQPLGGAQGQSTDIQIQAKEILRLREVGNDILAKHTGQPREKLIADTERDNFMT 181
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A EA ++G++D+V+ + IE+ +
Sbjct: 182 AEEAKEYGLIDEVITRPVKIEKPKE 206
>gi|91977364|ref|YP_570023.1| endopeptidase Clp [Rhodopseudomonas palustris BisB5]
gi|123721781|sp|Q135W7|CLPP_RHOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91683820|gb|ABE40122.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisB5]
Length = 214
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 136/203 (66%), Positives = 174/203 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED M+TL+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYV + G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
++A A ++G+VDKV+ R +
Sbjct: 181 KFLTAEMAREFGIVDKVIDKRAE 203
>gi|238023189|ref|ZP_04603615.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
gi|237865572|gb|EEP66712.1| hypothetical protein GCWU000324_03115 [Kingella oralis ATCC 51147]
Length = 206
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 117/202 (57%), Positives = 158/202 (78%), Gaps = 2/202 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ L+P V+EQ+ RGER++DIYSRLLKERI+F+ G + DH A L+ AQLLFLE+EN
Sbjct: 3 PDIQNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESEN 62
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I YINSPGG VTAGM+IYDTM+FIKP + T C+GQAASMG+ LLSAG KG RFAL
Sbjct: 63 PDKDIYFYINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFAL 122
Query: 131 PNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PN+R+++HQP GQASDIE HA++++K+K +LN++ ++ GK+ E++E+ DRD+
Sbjct: 123 PNSRVMIHQPLISGGLGGQASDIEIHARELLKLKEKLNQMLAEHTGKSLEQIERDTDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRID 210
MSA EA D+G++DKV+ +R D
Sbjct: 183 FMSAQEAADYGLIDKVITTRAD 204
>gi|209885039|ref|YP_002288896.1| Clp protease [Oligotropha carboxidovorans OM5]
gi|226706464|sp|B6JGU7|CLPP_OLICO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|209873235|gb|ACI93031.1| Clp protease [Oligotropha carboxidovorans OM5]
Length = 210
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 139/203 (68%), Positives = 178/203 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED M+TLI AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G++Y+ +E L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQSYQAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
+ ++A +A D+G+VDKV+ R +
Sbjct: 181 NFLTAEKARDFGIVDKVIDKRPE 203
>gi|28897691|ref|NP_797296.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|260898290|ref|ZP_05906786.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308094762|ref|ZP_05891792.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
gi|31340006|sp|Q87R80|CLPP_VIBPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28805904|dbj|BAC59180.1| ATP-dependent Clp protease, proteolytic subunit [Vibrio
parahaemolyticus RIMD 2210633]
gi|308088425|gb|EFO38120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus Peru-466]
gi|308093191|gb|EFO42886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
parahaemolyticus AN-5034]
Length = 200
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 125/197 (63%), Positives = 159/197 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 2 SPIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R+ LP
Sbjct: 62 DKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +E+ DRD+ MS
Sbjct: 122 NSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMS 181
Query: 192 ASEACDWGVVDKVLMSR 208
A +A ++G+VD VL R
Sbjct: 182 AEQAVEYGIVDAVLSHR 198
>gi|254492068|ref|ZP_05105244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxidans DMS010]
gi|224462732|gb|EEF79005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylophaga
thiooxydans DMS010]
Length = 212
Score = 247 bits (630), Expect = 9e-64, Method: Composition-based stats.
Identities = 119/199 (59%), Positives = 156/199 (78%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVP+VVEQT+RGERSYDIYSRLLKER++F+ G +ED MA LI AQLLFLE+ENP K
Sbjct: 13 IQNALVPIVVEQTSRGERSYDIYSRLLKERVIFLVGPVEDQMANLIVAQLLFLESENPDK 72
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMAIYDTMQF+KP +ST C+GQAASMG++LL+ G +G R LPN+
Sbjct: 73 DIHLYINSPGGAVTAGMAIYDTMQFVKPNVSTLCIGQAASMGAVLLAGGAEGKRHCLPNS 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GGF GQASD + HA++I+ I+ RLN I + G+ E + + DRD+ M+
Sbjct: 133 RIMVHQPLGGFQGQASDFDIHAKEILSIRDRLNGILAHHTGQDIEAIRRDTDRDNFMNGE 192
Query: 194 EACDWGVVDKVLMSRIDIE 212
+A ++G++D VL SR + +
Sbjct: 193 QALEYGLIDSVLTSRPEEK 211
>gi|85058649|ref|YP_454351.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
gi|84779169|dbj|BAE73946.1| ATP-dependent Clp protease proteolytic subunit [Sodalis
glossinidius str. 'morsitans']
Length = 207
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 135/209 (64%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--EQDNFAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFMTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ++FLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +STFCMGQAASMG+ LL+
Sbjct: 59 AQMMFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G+ E +
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKARMNELMAKHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA D+G+VD VL R
Sbjct: 179 ERDTERDRFLSAPEAVDYGLVDSVLSQRT 207
>gi|300721991|ref|YP_003711271.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
gi|297628488|emb|CBJ89055.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus nematophila ATCC 19061]
Length = 207
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G K+D + LVPMVVEQT RGER++DIYSRLLK+RI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--KQDQYAPNMSLVPMVVEQTARGERAFDIYSRLLKDRIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G RF LPN+R+++HQP GGF GQA+DI+ HAQ+I+K+K R+NE+ K+ G+ +++
Sbjct: 119 AGAEGKRFCLPNSRVMIHQPLGGFQGQATDIQIHAQEILKVKARMNELMAKHTGQPLDKI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA D+G+VD + R
Sbjct: 179 EEDTERDRFLSASEAVDYGLVDSIFTQRN 207
>gi|83949690|ref|ZP_00958423.1| Protease subunit of ATP-dependent Clp protease [Roseovarius
nubinhibens ISM]
gi|83837589|gb|EAP76885.1| Protease subunit of ATP-dependent Clp protease [Roseovarius
nubinhibens ISM]
Length = 203
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 128/202 (63%), Positives = 170/202 (84%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++L+ AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLVVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AG KGMR++LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIRPAVSTLVIGQAASMGSLLLTAGAKGMRYSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYVK+ G+T ++VE+ L+RD+ MS E
Sbjct: 121 IMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQTLKKVEEALERDNFMSPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKSK 216
A WG++D+++ SR +E K
Sbjct: 181 AKSWGLIDEIVESRGKADEDDK 202
>gi|99081368|ref|YP_613522.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria sp.
TM1040]
gi|99037648|gb|ABF64260.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruegeria sp.
TM1040]
Length = 218
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 126/213 (59%), Positives = 174/213 (81%), Gaps = 1/213 (0%)
Query: 4 EGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQ
Sbjct: 5 QAGPMIDPTETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQ 64
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LEAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AG
Sbjct: 65 LLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAG 124
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
E GMRF+LPN+R+++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYVK+ G+ Y+ +EK
Sbjct: 125 EAGMRFSLPNSRVMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEK 184
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
L+RD+ MS +A ++G++D+++ +R ++
Sbjct: 185 ALERDNFMSPEQAKEFGLIDEIVENRSKADDAE 217
>gi|330814219|ref|YP_004358458.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487314|gb|AEA81719.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 204
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 123/203 (60%), Positives = 164/203 (80%), Gaps = 1/203 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT RGER+YDIYSRLLKERI+F+ G I +++LI AQLLFL
Sbjct: 1 MKDPIDIYMNTLVPMVVEQTPRGERAYDIYSRLLKERIIFLVGPINSQVSSLISAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+EN KEI +YINSPGG+VT G+AIYDTMQ+IKP ++T C+GQA SMGS LL+AGEKG
Sbjct: 61 ESENNSKEIFMYINSPGGIVTDGLAIYDTMQYIKPAVATLCIGQACSMGSFLLAAGEKGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPN+R+++HQPS GF GQA+DIE HA +I++ K++LNEIY K+ G++ E++++ L+R
Sbjct: 121 RMSLPNSRVMVHQPSAGFQGQATDIEIHANEIMQTKKKLNEIYSKHTGQSVEKIKEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D MSA EA +G++DKV+ R
Sbjct: 181 DKFMSAEEAKAFGLIDKVVEKRP 203
>gi|300715591|ref|YP_003740394.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
gi|299061427|emb|CAX58539.1| ATP-dependent Clp protease proteolytic subunit [Erwinia billingiae
Eb661]
Length = 215
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 133/209 (63%), Positives = 174/209 (83%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 9 MSYSG--EREQTAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIV 66
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 67 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 126
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ALPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ GKT EE+
Sbjct: 127 AGTKGKRYALPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGKTLEEI 186
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD VL R
Sbjct: 187 ERDTERDRFLSASEAVEYGLVDSVLTHRT 215
>gi|126741244|ref|ZP_01756923.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
SK209-2-6]
gi|126717649|gb|EBA14372.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
SK209-2-6]
Length = 210
Score = 247 bits (630), Expect = 1e-63, Method: Composition-based stats.
Identities = 128/209 (61%), Positives = 172/209 (82%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL L
Sbjct: 1 MTDPRETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGGF GQA+DI HA++ +K+KRRLNEIYVK+ G+ ++VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGFQGQATDIMIHAEETLKLKRRLNEIYVKHTGQELDKVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS EA ++G++D+++ +R E +
Sbjct: 181 DNFMSPEEAKEFGLIDEIVENRAKGEGED 209
>gi|148255923|ref|YP_001240508.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bradyrhizobium
sp. BTAi1]
gi|166201801|sp|A5EKA8|CLPP_BRASB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146408096|gb|ABQ36602.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bradyrhizobium
sp. BTAi1]
Length = 210
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 135/203 (66%), Positives = 173/203 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED MATLI AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMATLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+G+AIYDTMQFI+P +ST C GQAASMGSLLL AG K MR
Sbjct: 61 AENPKKEIAMYINSPGGVVTSGLAIYDTMQFIRPAVSTLCTGQAASMGSLLLCAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G++Y+ +E L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQSYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
++A A ++G++DKV+ R +
Sbjct: 181 KFLTAEAAAEFGLIDKVIDKRPE 203
>gi|329120061|ref|ZP_08248731.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
gi|327463592|gb|EGF09910.1| ATP-dependent Clp protease, protease subunit [Neisseria
bacilliformis ATCC BAA-1200]
Length = 211
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 113/205 (55%), Positives = 157/205 (76%), Gaps = 2/205 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E L+P V+EQ+ RGER++DIYSRLLKERI+F+ G + DH A L+ AQ+LFLE+EN
Sbjct: 3 PEISNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLIGPVNDHTANLVVAQMLFLESEN 62
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I YINSPGG VTAGM+++DTM FIKP +ST C+GQAASMG+ LLSAG KG RFAL
Sbjct: 63 PDKDIFFYINSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFAL 122
Query: 131 PNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P++R+++HQP GQASDIE HA++++K+K+ LNE+ K+ G+ E++E+ DRD+
Sbjct: 123 PHSRVMIHQPLISGGLGGQASDIEIHARELIKLKQTLNELLAKHTGQPIEKIERDTDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDIEE 213
MSA A ++G++D+V+ +R D +
Sbjct: 183 FMSAQAAKEYGLIDQVIATRADAAK 207
>gi|239995517|ref|ZP_04716041.1| ATP-dependent Clp protease proteolytic subunit [Alteromonas
macleodii ATCC 27126]
Length = 209
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 164/209 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVPMVVEQT++GERSYDIYSRLLKE ++F+ GQ+EDHMA LI AQ+LFL
Sbjct: 1 MTNTPFDPMNALVPMVVEQTSKGERSYDIYSRLLKENVIFLVGQVEDHMANLIVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+I LYINSPGG VTAGMAIYDTM+FIKP +ST CMGQAASMG+ LLSAG KG
Sbjct: 61 EAENPEKDIFLYINSPGGSVTAGMAIYDTMKFIKPDVSTVCMGQAASMGAFLLSAGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPN+R+++HQP GGF GQASD E HA++I+ IK +LN + + G+ YE+V + DR
Sbjct: 121 RYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLMADHTGQDYEKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ +SA+EA ++G+VD+VL +R D+
Sbjct: 181 DNFLSATEAKEYGLVDQVLANRSDVAATK 209
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 120/209 (57%), Positives = 160/209 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ ++ E LGLVPMV+E + RGER+YDIYSRLL+ER+VF+ G++ D A L+
Sbjct: 1 MNQNHFQSENLEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVVFLVGEVNDQTANLVI 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+ISLYINSPGG V+AG+AIYDTMQFIKP +ST CMG AASMG+ LL
Sbjct: 61 AQLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLC 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AGEKG R+ALPN+R+++HQP GG GQASDIE A++I+ ++ RLN+I G++ + +
Sbjct: 121 AGEKGKRYALPNSRVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIDTI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD+ MSA +A ++G++DKV+ R
Sbjct: 181 AKDTDRDNFMSAEQAREYGLIDKVIEKRP 209
>gi|237807855|ref|YP_002892295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
gi|237500116|gb|ACQ92709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Tolumonas
auensis DSM 9187]
Length = 207
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 157/201 (78%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
LVP+VVEQT RGERSYDIYSRLLKER++F+TGQ+ED MA LI AQLLFLE+
Sbjct: 7 DQISSPLNSLVPIVVEQTARGERSYDIYSRLLKERVIFLTGQVEDQMANLIVAQLLFLES 66
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP K+I +YINSPGG VTAGMAIYDT++FIKP +ST CMGQA SMG+ LLSAG KG RF
Sbjct: 67 ENPDKDIYIYINSPGGSVTAGMAIYDTLKFIKPDVSTVCMGQACSMGAFLLSAGTKGKRF 126
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LP+AR+++HQP GGF GQASDI+ HA +I+KIK RLN + ++ G+ E +E+ DRD+
Sbjct: 127 CLPSARVMIHQPLGGFQGQASDIQIHAMEILKIKERLNNLLAEHTGQPLERIERDTDRDN 186
Query: 189 IMSASEACDWGVVDKVLMSRI 209
MSA +A ++G+VD +L R
Sbjct: 187 FMSADQAVEYGLVDAILKKRA 207
>gi|255589435|ref|XP_002534960.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223524291|gb|EEF27423.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 435
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 122/208 (58%), Positives = 159/208 (76%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+G ++ E LG +PMV+EQ+ RGERSYDIYSRLLKER++F+ G + D A L+ AQL
Sbjct: 228 KGMMQQRMEPQGLGYIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDMTANLVVAQL 287
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEAENP K+ISLYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+AG
Sbjct: 288 LFLEAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLTAGA 347
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG RF LPN+R+++HQP GGF GQASDIE HA++I+ +K +LN I + G+ + +
Sbjct: 348 KGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKDKLNGIMAHHTGQNIDTIAND 407
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDI 211
DRD+ MSA A +G+VD+V+ +R +
Sbjct: 408 TDRDNFMSADAAKAYGLVDQVIAARSAV 435
>gi|163857103|ref|YP_001631401.1| ATP-dependent Clp protease proteolytic subunit [Bordetella petrii
DSM 12804]
gi|226706441|sp|A9IR54|CLPP_BORPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|163260831|emb|CAP43133.1| ATP-dependent Clp protease proteolytic subunit [Bordetella petrii]
Length = 217
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D+ A LI AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDNTANLIVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AGMAIYDTMQF+KP +ST C G AASMG+ LL+AG+KG RF LPN+RI
Sbjct: 82 SLYINSPGGSVYAGMAIYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I +N G+ E + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRID 210
+G+VDKVL SR +
Sbjct: 202 VSYGLVDKVLASRSE 216
>gi|242240292|ref|YP_002988473.1| ATP-dependent Clp protease proteolytic subunit ClpP [Dickeya
dadantii Ech703]
gi|242132349|gb|ACS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dickeya
dadantii Ech703]
Length = 207
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+ED+MA LI
Sbjct: 1 MSYSG--EQEKQTPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDYMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G++ + +
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKARMNELMAKHTGQSLDII 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA ++G+VD VL R
Sbjct: 179 ERDTERDRFLSAGEAVEYGLVDSVLTHRE 207
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 116/199 (58%), Positives = 157/199 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+V+EQTNRGER+YDIYSRLLK+RIVF+ I+D +A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPIVIEQTNRGERAYDIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IKP +ST C+G AASMG++LL+ G G R ALPN+RI
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG G+A DIE HA++I++++ LNEI VK+ + E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPWGGVQGRALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+G++D+V+ R EK
Sbjct: 181 KQYGLIDEVIYKRTKAGEK 199
>gi|110633522|ref|YP_673730.1| ATP-dependent Clp protease proteolytic subunit [Mesorhizobium sp.
BNC1]
gi|116243101|sp|Q11J60|CLPP1_MESSB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|110284506|gb|ABG62565.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chelativorans
sp. BNC1]
Length = 210
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 150/205 (73%), Positives = 180/205 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+ + + LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED MATL+CAQLLFLE
Sbjct: 1 MKNPVETAMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPVEDGMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFI+PP+ST C+GQAASMGSLLL AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTSGMAIYDTMQFIQPPVSTLCIGQAASMGSLLLCAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNAR+++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +E+TLDRD
Sbjct: 121 FATPNARVMVHQPSGGFQGQASDIERHAQDIIKLKRRLNEIYVKHTGQDYDTIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M+A EA +G+VD+V+ R IE
Sbjct: 181 HFMTADEAQAFGLVDRVISEREAIE 205
>gi|83943111|ref|ZP_00955571.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
EE-36]
gi|83846119|gb|EAP83996.1| Protease subunit of ATP-dependent Clp protease [Sulfitobacter sp.
EE-36]
Length = 211
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 129/201 (64%), Positives = 167/201 (83%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL AGEKGMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLQAGEKGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGG+ GQA+DI HAQ+ K+K RLNEIYVK+ G+ E+VE L+RD+ MS E
Sbjct: 121 VMVHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVKHTGQPLEKVEAALERDNFMSPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A DWG++D+++ +R +++
Sbjct: 181 AKDWGLIDEIVENRGKMDDPD 201
>gi|259416932|ref|ZP_05740852.1| Clp protease [Silicibacter sp. TrichCH4B]
gi|259348371|gb|EEW60148.1| Clp protease [Silicibacter sp. TrichCH4B]
Length = 218
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 127/213 (59%), Positives = 176/213 (82%), Gaps = 1/213 (0%)
Query: 4 EGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQ
Sbjct: 5 QAGPMIDPTETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQ 64
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LEAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AG
Sbjct: 65 LLHLEAENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAG 124
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
E GMRF+LPN+R+++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYVK+ G+ Y+ +EK
Sbjct: 125 EAGMRFSLPNSRVMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEK 184
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
L+RD+ MS +A ++G++D+++ +R+ E++
Sbjct: 185 ALERDNFMSPEQAKEFGLIDEIVENRVKAEDEE 217
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 115/202 (56%), Positives = 159/202 (78%), Gaps = 2/202 (0%)
Query: 16 LGLVPM--VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ +PM VVEQT+RGERSYDIYSRLLK+RIVF+ I+D +A ++ AQLLFLE+E+P K
Sbjct: 1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESEDPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+ISLYINSPGG VT+G+AIYDTMQ++KP +ST C+GQAASMG+ LL+ G G RFA+PNA
Sbjct: 61 DISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNA 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GGF GQA+DI+ A++I+++K +LN+I K+ + E +EK DRD+ M A
Sbjct: 121 RIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFMGAG 180
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
EA ++G++D+V++ + EK
Sbjct: 181 EAKEYGLIDEVIVHKPKATEKK 202
>gi|227821606|ref|YP_002825576.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
fredii NGR234]
gi|227340605|gb|ACP24823.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
fredii NGR234]
Length = 210
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 160/209 (76%), Positives = 187/209 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YV++CG+TYEEVE+TLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVRHCGRTYEEVEQTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H MS+ EA DWG++DKV+ SR IE +
Sbjct: 181 HFMSSDEALDWGLIDKVITSREAIEGGEQ 209
>gi|256369536|ref|YP_003107046.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti
CCM 4915]
gi|255999698|gb|ACU48097.1| ATP-dependent Clp protease proteolytic subunit [Brucella microti
CCM 4915]
Length = 209
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 148/209 (70%), Positives = 182/209 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQLLFLE
Sbjct: 1 MRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +E TLDRD
Sbjct: 121 YALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIECTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA ++G++DKV+ +R ++SK
Sbjct: 181 HFMTAQEALEFGLIDKVVEARDVSADESK 209
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 156/193 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+EQT RGER+YDIYSRLLK RIVF+ I D +A L+ AQLLFLE+E+P+K+I L
Sbjct: 2 LVPIVIEQTPRGERAYDIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AIYDTM+ IKP ++T C+GQAASM ++LL+AG+KG R+ALP++R+++
Sbjct: 62 YINSPGGEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A+DIE H ++I+KIKR LNEI + G+ E++E+ DRD MSA EA +
Sbjct: 122 HQPLGGAYGPAADIEIHTREILKIKRVLNEILAHHTGQPIEKIERDTDRDFFMSAYEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G+VD+VL S+ +
Sbjct: 182 YGIVDEVLESKKE 194
>gi|15895898|ref|NP_349247.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum ATCC 824]
gi|18202304|sp|P58276|CLPP_CLOAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|15025667|gb|AAK80587.1|AE007761_6 Protease subunits of ATP-dependent protease, ClpP [Clostridium
acetobutylicum ATCC 824]
gi|325510050|gb|ADZ21686.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
acetobutylicum EA 2018]
Length = 193
Score = 246 bits (629), Expect = 1e-63, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+R++F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRVIFLGEEVNDTTASLVVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ++KP +ST C+G AASMGS LL+AG G RFALPN+ I
Sbjct: 61 YLYINSPGGSITSGMAIYDTMQYVKPDVSTICIGMAASMGSFLLTAGAPGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HAQ I++IK++LN IY + GK E +EK DRDH +SA EA
Sbjct: 121 MIHQPLGGFKGQATDIGIHAQRILEIKKKLNSIYSERTGKPIEVIEKDTDRDHFLSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 181 KEYGLIDEVITK 192
>gi|322834046|ref|YP_004214073.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
gi|321169247|gb|ADW74946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rahnella sp.
Y9602]
Length = 207
Score = 246 bits (628), Expect = 1e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--EREQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAE+P+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAESPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ GK+ EE+
Sbjct: 119 AGAEGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAKHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA +G+VD V R
Sbjct: 179 ERDTERDRFLSADEAVQYGLVDSVFTHRA 207
>gi|317047175|ref|YP_004114823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
gi|316948792|gb|ADU68267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
At-9b]
Length = 207
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 173/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--DREFTAPHMALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K+R+NE+ ++ GK+ E++
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSILTHRQ 207
>gi|290474663|ref|YP_003467543.1| clpA-clpP ATP-dependent serine protease proteolytic subunit
[Xenorhabdus bovienii SS-2004]
gi|289173976|emb|CBJ80763.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus bovienii SS-2004]
Length = 207
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 169/209 (80%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G K+D + LVPMVVEQT RGER++DIYSRLLK+RI+F+TG +EDHMA LI
Sbjct: 1 MSYSG--KQDKYAPNMSLVPMVVEQTARGERAFDIYSRLLKDRIIFLTGPVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I+LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDINLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HAQ+I+K+K R+NE+ K+ GK E++
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKARMNELMAKHTGKPLEKI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ +RD +SA+E+ ++G+VD + R
Sbjct: 179 VEDTERDRFLSAAESVEYGLVDSIFTQRN 207
>gi|33592842|ref|NP_880486.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
pertussis Tohama I]
gi|33596622|ref|NP_884265.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
parapertussis 12822]
gi|33601237|ref|NP_888797.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
bronchiseptica RB50]
gi|67460369|sp|Q7VXI7|CLPP_BORPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460372|sp|Q7W8X2|CLPP_BORPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460374|sp|Q7WK83|CLPP_BORBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33572490|emb|CAE42062.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
pertussis Tohama I]
gi|33573323|emb|CAE37306.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
parapertussis]
gi|33575672|emb|CAE32750.1| ATP-dependent Clp protease proteolytic subunit [Bordetella
bronchiseptica RB50]
Length = 217
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 118/196 (60%), Positives = 152/196 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D+ A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDNTANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG V AGMAIYDTMQFIKP +ST C G AASMG+ LL+AG+KG RF LPN+RI
Sbjct: 82 SFYINSPGGSVYAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I +N G+ E + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQPVERIAVDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRIDI 211
+G+VDKVL SR
Sbjct: 202 VSYGLVDKVLTSRAQT 217
>gi|39936026|ref|NP_948302.1| endopeptidase Clp [Rhodopseudomonas palustris CGA009]
gi|192291681|ref|YP_001992286.1| Endopeptidase Clp [Rhodopseudomonas palustris TIE-1]
gi|67460293|sp|Q6N5L3|CLPP_RHOPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706467|sp|B3Q7P5|CLPP_RHOPT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39649880|emb|CAE28402.1| ATP-dependent Clp protease proteolytic subunit [Rhodopseudomonas
palustris CGA009]
gi|192285430|gb|ACF01811.1| Endopeptidase Clp [Rhodopseudomonas palustris TIE-1]
Length = 212
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 138/203 (67%), Positives = 174/203 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED M+TLI AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYV + G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
++A A ++G+VDKV+ R +
Sbjct: 181 KFLTAEMAREFGIVDKVIEKRPE 203
>gi|126733145|ref|ZP_01748892.1| Clp protease, putative [Roseobacter sp. CCS2]
gi|126716011|gb|EBA12875.1| Clp protease, putative [Roseobacter sp. CCS2]
Length = 206
Score = 246 bits (628), Expect = 2e-63, Method: Composition-based stats.
Identities = 125/206 (60%), Positives = 169/206 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQT RGER+YDI+SRLLKERI+FV G + D M+ LI AQLL LE
Sbjct: 1 MQDPTETYMNLVPMVVEQTARGERAYDIFSRLLKERIIFVNGPVHDGMSQLIVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+KEIS+YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AG +GMR
Sbjct: 61 SENPKKEISMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGSEGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+R+++HQPSGG+ GQA+DI HA + K+K RLNEIYVK+ G T ++VE L+RD
Sbjct: 121 FSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGNTLKKVEAALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEE 213
+ MS EA +WG++D+++ +R ++
Sbjct: 181 NFMSPEEAKEWGLIDEIVENRTKSDD 206
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA I+KIK +LN I + G+ E ++K ++RD+ M A EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D V+ SR
Sbjct: 181 KEYGLIDDVITSRKK 195
>gi|238783609|ref|ZP_04627630.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
gi|238715487|gb|EEQ07478.1| ATP-dependent Clp protease proteolytic subunit [Yersinia bercovieri
ATCC 43970]
Length = 207
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 133/209 (63%), Positives = 169/209 (80%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA EA +G+VD V R
Sbjct: 179 ERDTERDRFLSAEEAVGYGLVDSVFTRRD 207
>gi|254460423|ref|ZP_05073839.1| Clp protease [Rhodobacterales bacterium HTCC2083]
gi|206677012|gb|EDZ41499.1| Clp protease [Rhodobacteraceae bacterium HTCC2083]
Length = 210
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 127/209 (60%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D D ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL L
Sbjct: 1 MNDPIDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AGEK M
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKDM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HAQ+ K+K RLNEIYV++ G+T ++VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHAQETQKLKTRLNEIYVQHTGQTLKKVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS EA ++G++D++L +R ++
Sbjct: 181 DNFMSPEEAKEFGLIDEILQTRPKTGDEE 209
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 120/195 (61%), Positives = 155/195 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA I+KIK +LN+I + GK E ++K ++RD+ M A EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D V+ SR
Sbjct: 181 KEYGLIDDVITSRKK 195
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 160/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGER+YDIYSRLLK+RI+F+ G I+D+ A LI AQ+LFLEAE+P+K+I
Sbjct: 1 MNLVPIVVEQTNRGERAYDIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGVVTAGMAIYDTMQ+++ P++T C+GQAASM SLLL+AG KG R++LP ARI
Sbjct: 61 QFYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQA+DIE HA++I+++++ LNEI ++ G+ E++ + +RD+ MSA EA
Sbjct: 121 LIHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V R
Sbjct: 181 KEYGIIDEVYDVRK 194
>gi|316933821|ref|YP_004108803.1| endopeptidase Clp [Rhodopseudomonas palustris DX-1]
gi|315601535|gb|ADU44070.1| Endopeptidase Clp [Rhodopseudomonas palustris DX-1]
Length = 212
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 138/206 (66%), Positives = 174/206 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED M+TLI AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYV + G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEE 213
++A A ++G+VDKV+ R +
Sbjct: 181 KFLTAEMAREFGIVDKVIDKRPEDPS 206
>gi|222148264|ref|YP_002549221.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium vitis
S4]
gi|221735252|gb|ACM36215.1| ATP-dependent Clp protease proteolytic subunit ClpP [Agrobacterium
vitis S4]
Length = 210
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 156/205 (76%), Positives = 186/205 (90%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMA+L+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMASLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVTAGMAIYDTMQFI+P +ST C+GQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPKKEIAIYINSPGGVVTAGMAIYDTMQFIRPAVSTLCVGQAASMGSLLLAAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+T EEVE TLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHARDIIKMKRRLNEVYVKHTGRTLEEVEHTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H M ++EA DWG++DK+L +R +IE
Sbjct: 181 HFMESTEAKDWGLIDKILTTRSEIE 205
>gi|121593621|ref|YP_985517.1| ATP-dependent Clp protease proteolytic subunit [Acidovorax sp.
JS42]
gi|166201795|sp|A1W5B6|CLPP_ACISJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120605701|gb|ABM41441.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidovorax sp.
JS42]
Length = 202
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 117/202 (57%), Positives = 155/202 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE
Sbjct: 1 MSALETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LPN++I++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD
Sbjct: 121 YSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKEQMNRILAERTGQPIEKVKADTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ M+A EA D+G+VD+V+ R
Sbjct: 181 YFMTADEAKDYGIVDQVIAKRP 202
>gi|126173838|ref|YP_001049987.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS155]
gi|153000122|ref|YP_001365803.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS185]
gi|160874744|ref|YP_001554060.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS195]
gi|217973910|ref|YP_002358661.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS223]
gi|304409711|ref|ZP_07391331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS183]
gi|307304067|ref|ZP_07583820.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica BA175]
gi|166214708|sp|A3D305|CLPP_SHEB5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214709|sp|A6WLQ1|CLPP_SHEB8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082464|sp|A9KWH7|CLPP_SHEB9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763799|sp|B8E5E9|CLPP_SHEB2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125997043|gb|ABN61118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
baltica OS155]
gi|151364740|gb|ABS07740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS185]
gi|160860266|gb|ABX48800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS195]
gi|217499045|gb|ACK47238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS223]
gi|304352229|gb|EFM16627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS183]
gi|306912965|gb|EFN43388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica BA175]
gi|315266986|gb|ADT93839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
Length = 202
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERSYDIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQSALVPMVIEQTAKGERSYDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPN+R+++HQP GGF GQASDI HA++I+ IK +LN++ ++ G+ E VE+ DRD
Sbjct: 121 HCLPNSRVMIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLEVVERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A ++G+VD V+ R
Sbjct: 181 NFMSATQAVEYGLVDSVMTKR 201
>gi|254480762|ref|ZP_05094009.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2148]
gi|214039345|gb|EEB80005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2148]
Length = 213
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 125/208 (60%), Positives = 162/208 (77%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M ++ + LGLVPMVVEQT+RGERSYDIYSRLLKER++FV GQ+EDHMA LI
Sbjct: 1 MPYQPDGRNSQTIDNLGLVPMVVEQTSRGERSYDIYSRLLKERVIFVVGQVEDHMANLIV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAG++IYDTMQFIKP +ST C+GQAASMG+ LL
Sbjct: 61 AQLLFLESENPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCLGQAASMGAFLLC 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPNAR ++HQPSGG GQA+DIE A++I+ I+ +LN++ ++ G+ E +
Sbjct: 121 GGAKGKRYCLPNARTMIHQPSGGAQGQATDIEIQAKEILIIREKLNQLMAEHTGQPLEVI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
E+ +RD M+A E+ +G+VD+V+ SR
Sbjct: 181 ERDTERDRFMNAEESTAYGLVDEVVTSR 208
>gi|6685315|sp|Q9X6W8|CLPP_AZOBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5002357|gb|AAD37435.1|AF150957_2 heat-shock protein ClpP [Azospirillum brasilense]
Length = 210
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 126/200 (63%), Positives = 163/200 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D E LVPMV+EQTNRGER YDIYSRLLKERI+F+ G + D +A+LIC+QLLFLE+E
Sbjct: 3 DFEPKMNALVPMVIEQTNRGERGYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I+LYINSPGG V+AG+AIYDTMQ+I+P +ST CMGQAASMGSLLL+AG G RF+
Sbjct: 63 NPSKDIALYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFS 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQPSGG GQASDIE AQ+I+K++ RLN+IYVK+ G++ + +E ++RD
Sbjct: 123 LPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQSLDTIEAXMERDKF 182
Query: 190 MSASEACDWGVVDKVLMSRI 209
MS EA +G++D+V+ R
Sbjct: 183 MSPEEAKAFGLIDEVVEKRP 202
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 118/199 (59%), Positives = 160/199 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + L+P+V+EQT RGER+YDIYSRLLK+RI+ + I+DH+A L+ AQLLFLE+E+P
Sbjct: 2 DKILNQLIPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I +YINSPGGVVTAG+AIYDTM +IKP + T CMGQAASMG+ LLSAG KG R++LP
Sbjct: 62 DKDIYMYINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI++HQP GGF GQA+DIE HA++I+++KR LNE K+ G+ E++E +RD+ MS
Sbjct: 122 NARIMIHQPLGGFQGQATDIEIHAKEILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++DKV+ R +
Sbjct: 182 AEEAKEYGLIDKVIYKRGE 200
>gi|222110341|ref|YP_002552605.1| ATP-dependent clp protease proteolytic subunit [Acidovorax ebreus
TPSY]
gi|254763789|sp|B9MG14|CLPP_DIAST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221729785|gb|ACM32605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
ebreus TPSY]
Length = 202
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 117/202 (57%), Positives = 155/202 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE
Sbjct: 1 MSALETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LPN++I++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD
Sbjct: 121 YSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPIEKVKADTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ M+A EA D+G+VD+V+ R
Sbjct: 181 YFMTADEAKDYGIVDQVIAKRP 202
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 122/196 (62%), Positives = 160/196 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQT++GERSYDIYSRLLKERI+F+ GQ+ED+MA LI AQLLFLEAE+P+K+I
Sbjct: 1 MALIPMVVEQTSKGERSYDIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G KG RFALPNAR+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L ++ G+++++V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQSFDKVAADTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++DKVL SR ++
Sbjct: 181 KEYGLIDKVLTSRGEV 196
>gi|308050308|ref|YP_003913874.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
gi|307632498|gb|ADN76800.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ferrimonas
balearica DSM 9799]
Length = 207
Score = 246 bits (627), Expect = 2e-63, Method: Composition-based stats.
Identities = 125/207 (60%), Positives = 159/207 (76%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + L+PMVVEQT +GERSYDIYSRLLKER++F+TG +EDHMA L+ AQLLFL
Sbjct: 1 MQHLLDSPLNALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGPVEDHMANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+ G KG
Sbjct: 61 ESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPDVSTVCMGQAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DR
Sbjct: 121 RHVLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLLLAEHTGQPMEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEE 213
D+ MSA++A ++G+VD VL R E
Sbjct: 181 DNFMSATDAVEYGLVDSVLTRRAADAE 207
>gi|253990891|ref|YP_003042247.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus
asymbiotica subsp. asymbiotica ATCC 43949]
gi|253782341|emb|CAQ85505.1| ATP-dependent proteolytic subunit of clpA-ClpP serine protease,
heat shock protein F21.5 [Photorhabdus asymbiotica]
Length = 207
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 133/202 (65%), Positives = 167/202 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+D + LVPMV+EQT RGERS+DIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLE
Sbjct: 6 KRDQYVPHMALVPMVIEQTARGERSFDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG +G R
Sbjct: 66 AENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAEGKR 125
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDIE HAQ+I+K+K R+N + K+ GK+ EE+EK +RD
Sbjct: 126 FCLPNSRVMIHQPLGGFQGQASDIEIHAQEILKVKGRMNSLMAKHTGKSLEEIEKDTERD 185
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SASEA ++G+VDK+ R
Sbjct: 186 RFLSASEAVEYGLVDKIFTHRD 207
>gi|161511142|ref|NP_539791.2| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|225852610|ref|YP_002732843.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
ATCC 23457]
gi|256044767|ref|ZP_05447671.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|256113666|ref|ZP_05454477.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 3 str. Ether]
gi|256263897|ref|ZP_05466429.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|260565631|ref|ZP_05836115.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|265991190|ref|ZP_06103747.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|265995026|ref|ZP_06107583.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 3 str. Ether]
gi|21759068|sp|Q8YHC8|CLPP_BRUME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763784|sp|C0RJ81|CLPP_BRUMB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225640975|gb|ACO00889.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
ATCC 23457]
gi|260151699|gb|EEW86793.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. 16M]
gi|262766139|gb|EEZ11928.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 3 str. Ether]
gi|263001974|gb|EEZ14549.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 1 str. Rev.1]
gi|263094029|gb|EEZ17963.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
bv. 2 str. 63/9]
gi|326409129|gb|ADZ66194.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M28]
gi|326538837|gb|ADZ87052.1| ATP-dependent Clp protease proteolytic subunit [Brucella melitensis
M5-90]
Length = 209
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 147/209 (70%), Positives = 182/209 (87%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQLLFLE
Sbjct: 1 MRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGATGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+AL NARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYVK+ G+ Y+ +E+TLDRD
Sbjct: 121 YALLNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVKHTGRDYDTIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA ++G++DKV+ +R ++SK
Sbjct: 181 HFMTAQEALEFGLIDKVVEARDVSADESK 209
>gi|260768947|ref|ZP_05877881.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|260616977|gb|EEX42162.1| ATP-dependent Clp protease proteolytic subunit [Vibrio furnissii
CIP 102972]
gi|315180643|gb|ADT87557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
furnissii NCTC 11218]
Length = 208
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 126/210 (60%), Positives = 163/210 (77%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLK+R++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNVMSPIIDALVPMVVEQTSRGERSYDIYSRLLKDRVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTLCIGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + + G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLADHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A D+G+VD +L R +
Sbjct: 179 ERDTDRDNFMSAQQAVDYGLVDALLTHRGE 208
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 120/201 (59%), Positives = 155/201 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D LVP VVEQT RGER+YDIYSRLLK+RIVF+ +IE+HMA L+ AQLLFLE
Sbjct: 1 MRDVPASRAALVPYVVEQTGRGERTYDIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P+K++ LYINSPGGVVTAGMAIYDTMQ+IK P+ST C GQAASM ++LL+ G KG R
Sbjct: 61 SEDPEKDVYLYINSPGGVVTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALP+ARI++HQP GG GQA+DIE A++I++++ LN+I V + G+ E ++ DRD
Sbjct: 121 IALPHARIMIHQPLGGAQGQATDIEIQAKEILRLREVLNQILVDHTGQPVERIKADTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
MSA EA +G+VDKV+ R
Sbjct: 181 FFMSAPEAVAYGLVDKVIDKR 201
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 245 bits (626), Expect = 2e-63, Method: Composition-based stats.
Identities = 114/202 (56%), Positives = 157/202 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VPMVVE + RGER+YDIYSRLLKERI+F+ G I+D +A +I AQ+LFLE+E+P K+
Sbjct: 1 MSYYVPMVVETSGRGERAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS+LL+AG KG R+ALP+AR
Sbjct: 61 IHLYINSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQ++DI+ A++I++++ NEI + G+ E++ +RD+ MSA E
Sbjct: 121 IMIHQPLGGAQGQSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKSK 216
A ++G++D+V++ D SK
Sbjct: 181 AKEYGLIDEVVLRPKDTSADSK 202
>gi|153829246|ref|ZP_01981913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae 623-39]
gi|148875284|gb|EDL73419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
cholerae 623-39]
Length = 200
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 125/199 (62%), Positives = 159/199 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+F VPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 2 SPIFDAXVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R+ LP
Sbjct: 62 DKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGKRYVLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++ G+ E +E+ DRD+ MS
Sbjct: 122 NSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHTGQPIEVIERDTDRDNFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A +A ++G+VD VL R +
Sbjct: 182 ADQAVEYGLVDAVLKHRGE 200
>gi|146277488|ref|YP_001167647.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides ATCC 17025]
gi|166214703|sp|A4WSH8|CLPP_RHOS5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145555729|gb|ABP70342.1| Endopeptidase Clp [Rhodobacter sphaeroides ATCC 17025]
Length = 210
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 132/210 (62%), Positives = 178/210 (84%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT+RGER+YDI+SR+LKERI+F++G + D M++LICAQLLFL
Sbjct: 1 MKDPIDLYMNTLVPMVVEQTSRGERAYDIFSRMLKERIIFLSGPVHDGMSSLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEI++YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPSKEIAMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HA++ K+KRRLNEIYVK+ G+ + VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVKHTGQDLDTVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ MSA +A WG++D++L SR ++ +K
Sbjct: 181 DNFMSAEDAKAWGLIDEILESRGKTDDTAK 210
>gi|253575671|ref|ZP_04853007.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845009|gb|EES73021.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 118/192 (61%), Positives = 155/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLK+RI+F++ I+D +A L+ AQLLFL AE+P+K+I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSNAIDDEVANLVIAQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGM IYDTMQ+IKP +ST C+G AASMGSLLL+AG G R+ALPN+ +
Sbjct: 61 HLYINSPGGSVTAGMGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAPGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA I+K +++LN+IYV+ G+ E++E+ DRD MSA EA
Sbjct: 121 MIHQPLGGVRGQATDIKIHADWIIKTRQKLNQIYVERTGQPLEKIERDTDRDFFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D+V+
Sbjct: 181 KAYGIIDQVISK 192
>gi|37527729|ref|NP_931074.1| ATP-dependent Clp protease proteolytic subunit [Photorhabdus
luminescens subsp. laumondii TTO1]
gi|60389709|sp|Q7N0L3|CLPP_PHOLL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|36787165|emb|CAE16241.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 (Endopeptidase Clp)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 207
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 131/202 (64%), Positives = 164/202 (81%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+D + LVPMVVEQT RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+ AQ+LFLE
Sbjct: 6 KRDQYAPHMALVPMVVEQTTRGERSYDIYSRLLKERIIFLTGQVEDHMANLVAAQMLFLE 65
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG R
Sbjct: 66 AENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKR 125
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPN+R+++HQP GGF GQA+DIE HAQ+I+K+K R+NE+ K+ G+ EE+ K +RD
Sbjct: 126 ICLPNSRVMIHQPLGGFQGQATDIEIHAQEILKVKSRMNELMAKHTGRPIEEIAKDTERD 185
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SA EA ++G+VDK+ R
Sbjct: 186 RFLSADEAVEYGLVDKIFTHRD 207
>gi|163751869|ref|ZP_02159083.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
gi|161328219|gb|EDP99383.1| ATP-dependent Clp protease proteolytic subunit [Shewanella benthica
KT99]
Length = 203
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 122/201 (60%), Positives = 159/201 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ E VF LVPMVVEQT +GERSYDIYSRLLKERI+F+ G +E+HMA L+ AQLLFL
Sbjct: 1 MQNAPESVFNALVPMVVEQTAKGERSYDIYSRLLKERIIFLVGPVEEHMANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G G
Sbjct: 61 ESESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPDVSTVCIGQAASMGAFLLAGGAAGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ ++ G++ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKDKLNQMLAEHTGQSLEVIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D+ MSA++A ++G++D V+
Sbjct: 181 DNFMSAAQAAEYGLIDSVMSK 201
>gi|332041211|gb|EGI77575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hylemonella
gracilis ATCC 19624]
Length = 194
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 113/194 (58%), Positives = 157/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G+VP+V+EQ+ RGERSYDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP KEI
Sbjct: 1 MGMVPIVIEQSGRGERSYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AGM+I+DTM FIKP +ST C+G AASMG+ LL+AG KG RF+LPN++I
Sbjct: 61 SLYINSPGGSVSAGMSIFDTMNFIKPDVSTLCIGMAASMGAFLLAAGAKGKRFSLPNSKI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE HA++I+K + +LN+I + G+ E++E+ +RD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIERDTERDYYLSADEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G+VD+V+ R
Sbjct: 181 KDYGLVDQVIAKRP 194
>gi|148259928|ref|YP_001234055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidiphilium
cryptum JF-5]
gi|146401609|gb|ABQ30136.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidiphilium
cryptum JF-5]
Length = 211
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 131/210 (62%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+D ++++ LVPMVVEQT RGERSYDI+SRLLKERI+F+TG + D + +LI AQLL
Sbjct: 2 PMDRDPTEIYMNSLVPMVVEQTARGERSYDIFSRLLKERIIFLTGPVYDQVGSLIAAQLL 61
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FLE+ENP KEI+ YINSPGGVV+AG+AIYDTMQ+IK P+ST C+GQAASMGSLLL+AGEK
Sbjct: 62 FLESENPSKEIAFYINSPGGVVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEK 121
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RFALPN+RI++HQPSGG GQASDIE A++I+ ++RRLN+IYV + G++ E +E+ L
Sbjct: 122 GKRFALPNSRIMVHQPSGGAQGQASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQAL 181
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+RD MSA+EA ++G+VD+V+ + + K
Sbjct: 182 ERDRFMSANEAQEFGLVDEVVEKKPAKDSK 211
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 118/199 (59%), Positives = 160/199 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + L+P+V+EQT RGER+YDIYSRLLK+RI+ + I+DH+A L+ AQLLFLE+E+P
Sbjct: 2 DKILNQLIPIVIEQTPRGERAYDIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I +YINSPGGVVTAG+AIYDTM +IKP + T CMGQAASMG+ LLSAG KG R++LP
Sbjct: 62 DKDIYMYINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI++HQP GGF GQA+DIE HA++I+++KR LNE K+ G+ E++E +RD+ MS
Sbjct: 122 NARIMIHQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMS 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++DKV+ R +
Sbjct: 182 AEEAKEYGLIDKVIYKRGE 200
>gi|294788594|ref|ZP_06753836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Simonsiella
muelleri ATCC 29453]
gi|294483471|gb|EFG31156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Simonsiella
muelleri ATCC 29453]
Length = 206
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 114/203 (56%), Positives = 155/203 (76%), Gaps = 2/203 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E L+P V+EQ+ RGER++DIYSRLLKERI+F+ G + DH A L+ AQLLFLE+EN
Sbjct: 3 PEIQNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDHTANLVVAQLLFLESEN 62
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I YINSPGG V+AGM+I+DTM FIKP + T C+GQAASMG+ LLSAG KG RFAL
Sbjct: 63 PDKDIYFYINSPGGSVSAGMSIFDTMNFIKPDVQTLCLGQAASMGAFLLSAGAKGKRFAL 122
Query: 131 PNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PN+RI++HQP GQASDIE HA++++K+K +LN + K+ G+ E++E+ DRD+
Sbjct: 123 PNSRIMIHQPLISGGLGGQASDIEIHARELIKLKEKLNNLLAKHTGQPLEKIERDTDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
MSA A ++G++DKV+ +R ++
Sbjct: 183 FMSAQTAMEYGLIDKVITNREEV 205
>gi|221068424|ref|ZP_03544529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas
testosteroni KF-1]
gi|220713447|gb|EED68815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Comamonas
testosteroni KF-1]
Length = 202
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG VTAGMAI+DTM FIKP +ST C G AASMG+ LLSAG KG R+ALPNA++
Sbjct: 69 SFYINSPGGSVTAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLSAGAKGKRYALPNAQV 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE HA++I+K + RLN+I + G+ E+++ +RD+ +SA EA
Sbjct: 129 MIHQPLGGARGQATEIEIHAREILKTRERLNKILAERTGQPLEKIQNDTERDYFLSADEA 188
Query: 196 CDWGVVDKVLMSRI 209
D+G+VD+V+ R
Sbjct: 189 KDYGLVDQVISKRS 202
>gi|183601061|ref|ZP_02962554.1| hypothetical protein PROSTU_04684 [Providencia stuartii ATCC 25827]
gi|188019401|gb|EDU57441.1| hypothetical protein PROSTU_04684 [Providencia stuartii ATCC 25827]
Length = 206
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 131/208 (62%), Positives = 169/208 (81%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G + + + LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYFGGQENLASQ--MALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAENPEKDIQLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DI+ HAQ+I+K+K R+NE+ + GK+ EE+
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIQIHAQEILKVKTRMNELMALHTGKSVEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
+ +RD +SA EA ++G+VD + SR
Sbjct: 179 NRDTERDRFLSADEAKEYGLVDHIYTSR 206
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
sp. JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 120/194 (61%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGER+YDIYSRLLK+RI+F+ G I+D +A L+ AQ+LFLEAE+P K+I
Sbjct: 1 MNLVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAGMAIYDTMQ+IKP +ST CMGQAASMGS LL+AG KG R+ALP RI
Sbjct: 61 HIYINSPGGVVTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA++I+++K LNE+ K+ G+ E + + +RD MSA EA
Sbjct: 121 MIHQPLGGVQGQATDIDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD+V+ R
Sbjct: 181 RKYGIVDEVISVRK 194
>gi|319898776|ref|YP_004158869.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
clarridgeiae 73]
gi|319402740|emb|CBI76287.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
clarridgeiae 73]
Length = 210
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 150/209 (71%), Positives = 180/209 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMVVEQTNRGER+YDI+SRLLKERI+F+ G +ED+MA L+CAQLLFLE
Sbjct: 1 MSDPIKTALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFI+P +ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINLYINSPGGVVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGATGRR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPNARI++HQPSGGF GQASDIERHAQDIVK+KRRLNEIYV++ G++YE +EKTLDRD
Sbjct: 121 FALPNARIMVHQPSGGFQGQASDIERHAQDIVKMKRRLNEIYVQHTGQSYEVIEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A E+ +G++D V+ R + E++ K
Sbjct: 181 HFMTAEESKQFGLIDDVIQYRAETEKEEK 209
>gi|320354136|ref|YP_004195475.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
gi|320122638|gb|ADW18184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfobulbus
propionicus DSM 2032]
Length = 200
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 115/200 (57%), Positives = 165/200 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQ+ RGER++DIYSRLLKERI+F+ Q+ D +A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MNLVPMVVEQSPRGERAFDIYSRLLKERIIFLGTQVNDDVASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG VTAGMAIYDTMQ+I+ ++T CMGQAASMG+LLL++G G RFALPN+RI
Sbjct: 61 TFYINSPGGSVTAGMAIYDTMQYIRCDVATLCMGQAASMGALLLASGAAGKRFALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DI+ HA++I++++ LN I ++ GK+ ++++ +RD+ MSA+EA
Sbjct: 121 MIHQPMGGYQGQATDIDIHAREILRMRHDLNTILARHTGKSMKKIQADTERDNFMSATEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
C++G++DKVL +R ++ +
Sbjct: 181 CEYGIIDKVLTNREELGGEK 200
>gi|158423232|ref|YP_001524524.1| ATP-dependent Clp protease proteolytic subunit [Azorhizobium
caulinodans ORS 571]
gi|172047856|sp|A8HYF2|CLPP_AZOC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158330121|dbj|BAF87606.1| ATP-dependent Clp protease proteolytic subunit [Azorhizobium
caulinodans ORS 571]
Length = 210
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 138/209 (66%), Positives = 175/209 (83%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D ++ LVPMVVEQTNRGER+YDIYSRLLKERI+F+TG +ED M+TL AQLLFL
Sbjct: 1 MRDPVDTYMNYLVPMVVEQTNRGERAYDIYSRLLKERIIFLTGPVEDGMSTLAVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+P +ST C+GQAASMGSLLL+AGEKG+
Sbjct: 61 EAENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLTAGEKGL 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQ +DI HAQ+I+ +K+RLNEIYVK+ G+ E++E L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQVTDIMLHAQEILSLKKRLNEIYVKHTGQPIEKIEDALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ M+A+ A ++G++D V+ R E
Sbjct: 181 DNFMTANAAQEFGLIDTVIDKRPSDEPAK 209
>gi|153813468|ref|ZP_01966136.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174]
gi|149830412|gb|EDM85504.1| hypothetical protein RUMOBE_03888 [Ruminococcus obeum ATCC 29174]
Length = 193
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 150/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM++IK +ST C+G AASMG+ LL+ G KG RFALP++ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRFALPHSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I + KR LNEI +N G+ YE VEK DRD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ +
Sbjct: 181 KAYGLIDGVVEHK 193
>gi|312882507|ref|ZP_07742248.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
caribbenthicus ATCC BAA-2122]
gi|309369907|gb|EFP97418.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
caribbenthicus ATCC BAA-2122]
Length = 208
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 126/210 (60%), Positives = 165/210 (78%), Gaps = 2/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPILDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ + +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKKKLNTLLAEHTGQPLDVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
E+ DRD+ MSA +A ++G+VD +L R +
Sbjct: 179 ERDTDRDNFMSADQAVEYGLVDSMLTHRSE 208
>gi|295689638|ref|YP_003593331.1| endopeptidase Clp [Caulobacter segnis ATCC 21756]
gi|295431541|gb|ADG10713.1| Endopeptidase Clp [Caulobacter segnis ATCC 21756]
Length = 210
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 150/210 (71%), Positives = 178/210 (84%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + LVPMVVEQT+RGER++DI+SRLLKERI+F+TG +ED MA+LICAQLLFL
Sbjct: 1 MMYDPVSTAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEI++YINSPGGVVTAG+AIYDTMQ+IK P+ST CMG AASMGSLLL+AG G
Sbjct: 61 ESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPNARI++HQPSGGF GQASDIERHA+DI+K KRRLNEIYVK+CG+TYEEVE+TLDR
Sbjct: 121 RISLPNARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
DH MSA EA WG+VD V SR E ++
Sbjct: 181 DHFMSADEAKAWGLVDHVYDSREAAEAGAE 210
>gi|149916365|ref|ZP_01904885.1| phosphoglycerate kinase [Roseobacter sp. AzwK-3b]
gi|149809819|gb|EDM69671.1| phosphoglycerate kinase [Roseobacter sp. AzwK-3b]
Length = 210
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 176/209 (84%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+FV G + D M++LI AQLL L
Sbjct: 1 MTDPYETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPAKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPSGG+ GQA+DI HA++ +K+K+RLN+IYVK+ G+T ++VE L+R
Sbjct: 121 RFSLPNSRIMVHQPSGGYQGQATDIMIHAEETLKLKKRLNQIYVKHTGQTLKKVEDALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS EA +WG++D+++ SR+ +++
Sbjct: 181 DNFMSPEEAKNWGLIDEIVESRVKTDDEK 209
>gi|167766384|ref|ZP_02438437.1| hypothetical protein CLOSS21_00888 [Clostridium sp. SS2/1]
gi|317496812|ref|ZP_07955142.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711975|gb|EDS22554.1| hypothetical protein CLOSS21_00888 [Clostridium sp. SS2/1]
gi|291559217|emb|CBL38017.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SSC/2]
gi|316895824|gb|EFV17976.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
Length = 193
Score = 245 bits (626), Expect = 3e-63, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 153/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A L+ +QLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVTAGLVVSQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQ++K +ST CMG AASMG+ LLS G KG R ALPNA I
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQYVKCDVSTMCMGMAASMGAFLLSGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++IE A+ I++ K++LN I +N G+ YE + K +RD+ ++A EA
Sbjct: 121 MIHQPSGGAQGQATEIEIAAEHILRTKKKLNTILSENTGQPYETIVKDTERDNWLTAQEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DKV+ +R
Sbjct: 181 LEYGLIDKVMENR 193
>gi|110680063|ref|YP_683070.1| ATP-dependent Clp protease proteolytic subunit [Roseobacter
denitrificans OCh 114]
gi|116243162|sp|Q165F9|CLPP_ROSDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109456179|gb|ABG32384.1| Clp protease, putative [Roseobacter denitrificans OCh 114]
Length = 208
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 126/207 (60%), Positives = 170/207 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
KD + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LE
Sbjct: 1 MKDPIETYMNLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMR
Sbjct: 61 AENPAKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+R+++HQPSGG+ GQA+DI HA + K+K RLNEIYVK+ G+T ++V L+RD
Sbjct: 121 FSLPNSRVMVHQPSGGYQGQATDIMIHAAETQKLKDRLNEIYVKHTGQTMKKVVDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ MS EA ++G++D+++ +R + +
Sbjct: 181 NFMSPEEAKEFGLIDEIVENRSKDDAE 207
>gi|90410782|ref|ZP_01218797.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
gi|90328413|gb|EAS44711.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
profundum 3TCK]
Length = 207
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ + + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--ERNAMSPITDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK+RLN + ++ G+ E V
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQRLNNLLAEHTGQPLEIV 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E DRD+ MSA +A ++G+VD VL R
Sbjct: 179 EGDTDRDNFMSADQAVEYGLVDSVLTQRD 207
>gi|15965008|ref|NP_385361.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti 1021]
gi|307301080|ref|ZP_07580849.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium
meliloti BL225C]
gi|307317814|ref|ZP_07597252.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium
meliloti AK83]
gi|18202306|sp|P58278|CLPP2_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|15074187|emb|CAC45834.1| Probable ATP-dependent CLP protease proteolytic subunit
[Sinorhizobium meliloti 1021]
gi|306896576|gb|EFN27324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium
meliloti AK83]
gi|306904035|gb|EFN34621.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium
meliloti BL225C]
Length = 208
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 159/205 (77%), Positives = 186/205 (90%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KE++LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEVALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+CG+TYEEVE+TLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHCGRTYEEVEQTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H MSA EA DWG++DKV+ SR +E
Sbjct: 181 HFMSADEALDWGLIDKVITSRDAVE 205
>gi|264677387|ref|YP_003277293.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni CNB-2]
gi|299533085|ref|ZP_07046471.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni S44]
gi|262207899|gb|ACY31997.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni CNB-2]
gi|298718970|gb|EFI59941.1| ATP-dependent Clp protease, proteolytic subunit [Comamonas
testosteroni S44]
Length = 202
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLESENPDKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG VTAGMAI+DTM FIKP +ST C G AASMG+ LLSAG KG R+ALPNA++
Sbjct: 69 SFYINSPGGSVTAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLSAGAKGKRYALPNAQV 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE HA++I+K + RLN+I + G+ E+++ +RD+ +SA EA
Sbjct: 129 MIHQPLGGARGQATEIEIHAREIIKTRERLNKILAERTGQPLEKIQNDTERDYFLSADEA 188
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+V+ R
Sbjct: 189 KEYGLVDQVISKRS 202
>gi|319794078|ref|YP_004155718.1| ATP-dependent clp protease, proteolytic subunit clpp [Variovorax
paradoxus EPS]
gi|315596541|gb|ADU37607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus EPS]
Length = 202
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG+VPMVVEQ+ RGERSYDIYSRLLKERIVF+ G++ D A L+ AQLLFLE+ENP+K+I
Sbjct: 9 LGMVPMVVEQSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVAQLLFLESENPEKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG V+AGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RF+LPN+++
Sbjct: 69 SFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGEKGKRFSLPNSKV 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD+ ++A EA
Sbjct: 129 MIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKTDTERDYFLTADEA 188
Query: 196 CDWGVVDKVLMSR 208
D+G+VD+V+ R
Sbjct: 189 KDYGLVDQVVAKR 201
>gi|260427575|ref|ZP_05781554.1| Clp protease [Citreicella sp. SE45]
gi|260422067|gb|EEX15318.1| Clp protease [Citreicella sp. SE45]
Length = 210
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 134/209 (64%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D ++ LVPMVVEQT+RGER+YDI+SRLLKERI+FV+G + D M++LI AQLL L
Sbjct: 1 MKDPFDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP IST +GQAASMGSLLL+AGE GM
Sbjct: 61 EAENPAKEISMYINSPGGVVTSGLSIYDTMQYIKPKISTLVIGQAASMGSLLLTAGEAGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYV++ G+T E+VE L+R
Sbjct: 121 RFSLPNSRIMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVRHTGQTLEKVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ MS +A +WG++D+++ SR E
Sbjct: 181 DNFMSPEDAKEWGLIDEIVESRGAAEASK 209
>gi|221234978|ref|YP_002517414.1| ATP-dependent Clp protease proteolytic subunit [Caulobacter
crescentus NA1000]
gi|220964150|gb|ACL95506.1| ATP-dependent endopeptidase clp, proteolytic subunit ClpP
[Caulobacter crescentus NA1000]
Length = 213
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 150/211 (71%), Positives = 178/211 (84%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
D + LVPMVVEQT+RGER++DI+SRLLKERI+F+TG +ED MA+LICAQLLF
Sbjct: 3 PMMYDPVSTAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLF 62
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP+KEI++YINSPGGVVTAG+AIYDTMQ+IK P+ST CMG AASMGSLLL+AG G
Sbjct: 63 LESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAG 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R +LPNARI++HQPSGGF GQASDIERHA+DI+K KRRLNEIYVK+CG+TYEEVE+TLD
Sbjct: 123 QRISLPNARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLD 182
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
RDH MSA EA WG+VD V SR E ++
Sbjct: 183 RDHFMSADEAKAWGLVDHVYDSRDAAEAGAE 213
>gi|222085564|ref|YP_002544094.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
gi|221723012|gb|ACM26168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
Length = 210
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 162/208 (77%), Positives = 190/208 (91%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP IST C+GQAASMGSLLL+AG+K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAISTLCIGQAASMGSLLLAAGDKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNEIYVK+CG+TYEEVE+TLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDIIKMKRRLNEIYVKHCGRTYEEVEQTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKS 215
H MS+ EA DWG++DKVL SR ++E ++
Sbjct: 181 HFMSSDEAKDWGLIDKVLTSRTEMEGEA 208
>gi|84515416|ref|ZP_01002778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Loktanella
vestfoldensis SKA53]
gi|84510699|gb|EAQ07154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Loktanella
vestfoldensis SKA53]
Length = 198
Score = 245 bits (625), Expect = 3e-63, Method: Composition-based stats.
Identities = 123/198 (62%), Positives = 164/198 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT RGER+YDI+SRLLKERI+F+ G + D M+ L+ AQLL LE+ENP+KEI
Sbjct: 1 MNLVPMVVEQTARGERAYDIFSRLLKERIIFLNGPVHDGMSQLVVAQLLHLESENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AG GMRF+LPN+R+
Sbjct: 61 SMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGHPGMRFSLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DI HA + K+K RLNEIYVK+ G+ ++VE L+RD+ MS EA
Sbjct: 121 MVHQPSGGYQGQATDIMIHAAETQKLKTRLNEIYVKHTGQPLKKVETALERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+WG++D+++++R E
Sbjct: 181 KEWGLIDEIVVNREKSSE 198
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
Length = 195
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 120/195 (61%), Positives = 155/195 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA I+KIK +LN+I + GK E ++K ++RD+ M A EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D V+ SR
Sbjct: 181 KEYGLIDDVITSRKK 195
>gi|16126206|ref|NP_420770.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter
crescentus CB15]
gi|3688205|emb|CAA09090.1| endopeptidase clp [Caulobacter crescentus CB15]
gi|13423424|gb|AAK23938.1| ATP-dependent Clp protease, proteolytic subunit [Caulobacter
crescentus CB15]
Length = 210
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 150/210 (71%), Positives = 178/210 (84%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + LVPMVVEQT+RGER++DI+SRLLKERI+F+TG +ED MA+LICAQLLFL
Sbjct: 1 MMYDPVSTAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEI++YINSPGGVVTAG+AIYDTMQ+IK P+ST CMG AASMGSLLL+AG G
Sbjct: 61 ESENPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPNARI++HQPSGGF GQASDIERHA+DI+K KRRLNEIYVK+CG+TYEEVE+TLDR
Sbjct: 121 RISLPNARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
DH MSA EA WG+VD V SR E ++
Sbjct: 181 DHFMSADEAKAWGLVDHVYDSRDAAEAGAE 210
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 116/193 (60%), Positives = 156/193 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+EQT RGER+YDIYSRLLK RIVF+ I D +A LI AQLLFLE+E+P+K+I L
Sbjct: 2 LVPIVIEQTPRGERAYDIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AIYDT++ IKP ++T C+GQAASM ++LL+AG+KG R+ALP++R+++
Sbjct: 62 YINSPGGEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A+DIE H ++I+KIKR LNEI + G+ E++EK DRD MSA EA +
Sbjct: 122 HQPLGGAYGPAADIEIHTREILKIKRVLNEILAYHTGQPIEKIEKDTDRDFFMSAYEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G+VD+VL S+ +
Sbjct: 182 YGIVDEVLESKKE 194
>gi|239977100|sp|P0CAU1|CLPP_CAUCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239977114|sp|B8GX16|CLPP_CAUCN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 209
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 150/207 (72%), Positives = 178/207 (85%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D + LVPMVVEQT+RGER++DI+SRLLKERI+F+TG +ED MA+LICAQLLFLE+E
Sbjct: 3 DPVSTAMNLVPMVVEQTSRGERAFDIFSRLLKERIIFLTGPVEDGMASLICAQLLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+KEI++YINSPGGVVTAG+AIYDTMQ+IK P+ST CMG AASMGSLLL+AG G R +
Sbjct: 63 NPKKEIAMYINSPGGVVTAGLAIYDTMQYIKSPVSTVCMGMAASMGSLLLAAGAAGQRIS 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGGF GQASDIERHA+DI+K KRRLNEIYVK+CG+TYEEVE+TLDRDH
Sbjct: 123 LPNARIMVHQPSGGFRGQASDIERHAEDIIKTKRRLNEIYVKHCGRTYEEVERTLDRDHF 182
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKSK 216
MSA EA WG+VD V SR E ++
Sbjct: 183 MSADEAKAWGLVDHVYDSRDAAEAGAE 209
>gi|319763664|ref|YP_004127601.1| ATP-dependent clp protease, proteolytic subunit clpp
[Alicycliphilus denitrificans BC]
gi|330824071|ref|YP_004387374.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
gi|317118225|gb|ADV00714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans BC]
gi|329309443|gb|AEB83858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicycliphilus denitrificans K601]
Length = 202
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 118/202 (58%), Positives = 156/202 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLKER++F+ G++ D A L+ AQLLFLE
Sbjct: 1 MSALETQALGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGEVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG VTAGMAIYDTMQFIKP +ST C G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCCGFAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN++I++HQ GG GQA+DIE HA+DI++ K ++N I + G++ E+V+ +RD
Sbjct: 121 FSLPNSKIMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQSIEKVKADTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ M+A EA D+G+VD+V+ R
Sbjct: 181 YFMTADEARDYGLVDQVISKRP 202
>gi|300311895|ref|YP_003775987.1| ATP-dependent Clp protease proteolytic subunit [Herbaspirillum
seropedicae SmR1]
gi|124483356|emb|CAM32551.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae]
gi|300074680|gb|ADJ64079.1| ATP-dependent Clp protease (proteolytic subunit) protein
[Herbaspirillum seropedicae SmR1]
Length = 208
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 126/207 (60%), Positives = 160/207 (77%), Gaps = 1/207 (0%)
Query: 3 FEGCAKKDSEDV-FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
G K+ + D LG+VPMV+EQ+ RGER+YDIYSRLLKERI+F+ G + D MA LI A
Sbjct: 1 MTGLMKQSALDTQMLGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDAMANLIVA 60
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AGMAI+DTMQFIKP +ST C G AASMG+ LL+A
Sbjct: 61 QLLFLESENPDKDISLYINSPGGSVSAGMAIFDTMQFIKPQVSTLCTGLAASMGAFLLAA 120
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RF+LPN+RI++HQP GG GQASDIE A++I+ ++ RLN I + G+T E++
Sbjct: 121 GAKGKRFSLPNSRIMIHQPLGGAQGQASDIEIQAREILYLRERLNTILAEKTGRTVEQIS 180
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSR 208
K DRD+ MSA A ++G++DKVL R
Sbjct: 181 KDTDRDNFMSADAAAEYGLIDKVLTER 207
>gi|312796430|ref|YP_004029352.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Burkholderia rhizoxinica HKI 454]
gi|312168205|emb|CBW75208.1| ATP-dependent endopeptidase clp proteolytic subunit clpP (EC
3.4.21.92) [Burkholderia rhizoxinica HKI 454]
Length = 238
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 122/201 (60%), Positives = 158/201 (78%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+D E LGLVPMVVE + RGER+YDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+
Sbjct: 38 RDFEAQALGLVPMVVETSGRGERAYDIYSRLLKERLVFLVGEVNDQAANLVVAQLLFLES 97
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP K+ISLYINSPGG V+AGMAIYDTMQFIKP ++T CMG AASMG+ LL+AG KG R
Sbjct: 98 ENPDKDISLYINSPGGSVSAGMAIYDTMQFIKPDVTTLCMGLAASMGAFLLAAGAKGKRI 157
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPNAR+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E++++ DRD+
Sbjct: 158 ALPNARVMIHQPLGGARGQASDIEIQAREILFLKERLNNLLAQHTGQPVEQIQRDTDRDN 217
Query: 189 IMSASEACDWGVVDKVLMSRI 209
MSA +A +G++D+VL R
Sbjct: 218 FMSAEDAQAYGLIDQVLHKRP 238
>gi|326403118|ref|YP_004283199.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|325049979|dbj|BAJ80317.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
Length = 209
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 173/209 (82%), Gaps = 1/209 (0%)
Query: 7 AKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+D ++++ LVPMVVEQT RGERSYDI+SRLLKERI+F+TG + D + +LI AQLLF
Sbjct: 1 MDRDPTEIYMNSLVPMVVEQTARGERSYDIFSRLLKERIIFLTGPVYDQVGSLIAAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP KEI+ YINSPGGVV+AG+AIYDTMQ+IK P+ST C+GQAASMGSLLL+AGEKG
Sbjct: 61 LESENPSKEIAFYINSPGGVVSAGLAIYDTMQYIKSPVSTVCIGQAASMGSLLLAAGEKG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RFALPN+RI++HQPSGG GQASDIE A++I+ ++RRLN+IYV + G++ E +E+ L+
Sbjct: 121 KRFALPNSRIMVHQPSGGAQGQASDIEIQAREILTLRRRLNDIYVTHTGQSLEAIEQALE 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
RD MSA+EA ++G+VD+V+ + + K
Sbjct: 181 RDRFMSANEAQEFGLVDEVVEKKPAKDSK 209
>gi|86749681|ref|YP_486177.1| endopeptidase Clp [Rhodopseudomonas palustris HaA2]
gi|116243157|sp|Q2IWZ4|CLPP_RHOP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|86572709|gb|ABD07266.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris HaA2]
Length = 212
Score = 245 bits (625), Expect = 4e-63, Method: Composition-based stats.
Identities = 137/203 (67%), Positives = 174/203 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED M+TL+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDGMSTLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYV + G+TY+ +E L+RD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVHHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
++A A D+G+VDKV+ R +
Sbjct: 181 KFLTADMARDFGIVDKVIDKRAE 203
>gi|315634780|ref|ZP_07890062.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
gi|315476332|gb|EFU67082.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
segnis ATCC 33393]
Length = 193
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVV+QT+RGER+YDIYSRLLK+R++F++G++ED+MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVDQTSRGERAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGAPGKRGALPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKGTLNERLAFHTGQPIETIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D+V R
Sbjct: 181 KNYGLIDEVFTKR 193
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
Length = 194
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT RGERSYDI+SRLLK+RI+F+ Q+ D A LI AQLLFLEAE+P K+I
Sbjct: 1 MALVPVVVEQTGRGERSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R ALPN+ I
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA+ I+KIK LNEI + G+ E+++ +RD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V R
Sbjct: 181 KEYGLIDEVFTKRP 194
>gi|157374680|ref|YP_001473280.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
sediminis HAW-EB3]
gi|189082467|sp|A8FTH9|CLPP_SHESH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157317054|gb|ABV36152.1| Endopeptidase Clp [Shewanella sediminis HAW-EB3]
Length = 203
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 126/202 (62%), Positives = 159/202 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ E V LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+E+HMA LI AQLLFL
Sbjct: 1 MQNAPESVLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLVGQVEEHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ G +G
Sbjct: 61 ESESPDKDIYLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ + G+ E +E+ DR
Sbjct: 121 RHCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPMEIIERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D+ MSA+EA ++G+VD VL R
Sbjct: 181 DNFMSAAEAAEYGLVDSVLSKR 202
>gi|150396095|ref|YP_001326562.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
medicae WSM419]
gi|150027610|gb|ABR59727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sinorhizobium
medicae WSM419]
Length = 208
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 159/205 (77%), Positives = 186/205 (90%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+CG+TYEEVE+TLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHCGRTYEEVEQTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
H MS+ EA DWG++DKV+ SR +E
Sbjct: 181 HFMSSDEALDWGLIDKVITSRDAVE 205
>gi|289207758|ref|YP_003459824.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
gi|288943389|gb|ADC71088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. K90mix]
Length = 224
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 160/201 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L LVPMVVEQT RGER+YDIYSRLLK+R++F G +ED+MA +I AQLLFLE+ENP KEI
Sbjct: 16 LNLVPMVVEQTARGERAYDIYSRLLKDRVIFCVGPVEDYMANVIVAQLLFLESENPDKEI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG++LL+ G G R++LP++R+
Sbjct: 76 SLYINSPGGAVTAGMAIYDTMQFIKPQVSTLCVGQAASMGAVLLAGGAPGKRYSLPHSRV 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HA++I+KI+ LN + + G+T E+VE+ DRD M+A EA
Sbjct: 136 MIHQPLGGFQGQASDIDIHAREILKIREELNRVLAHHTGQTVEQVEQDTDRDRFMTAVEA 195
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
D+G+VD VL SR K
Sbjct: 196 KDYGLVDNVLSSRGAPAAGDK 216
>gi|51246390|ref|YP_066274.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
gi|50877427|emb|CAG37267.1| probable ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Desulfotalea psychrophila LSv54]
Length = 213
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 121/200 (60%), Positives = 161/200 (80%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
V + L+PMVVEQT RGERSYDIYSRLLKERI+F+ + D +A +I AQLLFLEAE+P+
Sbjct: 8 SVIMNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPE 67
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I+ YINSPGG VTAGMAIYDTMQ+IK I+T CMGQAASMG++LL+AG G R+ALPN
Sbjct: 68 KDITFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPN 127
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GGF GQA+DIE H ++I++I++ LN I + GKT +++E +RD+ MS+
Sbjct: 128 SRIMIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSS 187
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA +G++D+VL+ R D+E
Sbjct: 188 VEAQKYGLIDEVLVKREDVE 207
>gi|330427935|gb|AEC19269.1| ATP-dependent Clp protease proteolytic subunit [Pusillimonas sp.
T7-7]
Length = 218
Score = 244 bits (624), Expect = 4e-63, Method: Composition-based stats.
Identities = 122/195 (62%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG VP+V+EQ+ RGERSYDIYSRLL+ER++F G + DH A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYVPIVIEQSGRGERSYDIYSRLLRERVIFFVGPVNDHTANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AGMAIYDTMQFIKP +ST C G AASMG+ LL+AG KG R+ LPN+RI
Sbjct: 82 SLYINSPGGSVYAGMAIYDTMQFIKPDVSTLCTGIAASMGAFLLAAGAKGKRYTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I KN G+ E + + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILSLRERLNTILAKNTGQPVERIAEDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRID 210
+G+VDKVL+SR D
Sbjct: 202 VSYGLVDKVLVSRAD 216
>gi|329296782|ref|ZP_08254118.1| ClpP [Plautia stali symbiont]
Length = 207
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--DREFTAPTNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K+R+NE+ ++ GK+ E++
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSILTHRQ 207
>gi|304407481|ref|ZP_07389133.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343432|gb|EFM09274.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 193
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 121/192 (63%), Positives = 157/192 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ I+D +A I AQLLFL A++P+K+I
Sbjct: 1 MNLVPIVVEQTNRGERSYDIYSRLLKDRIIFLGSAIDDDVANSIIAQLLFLAADDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGM I+DTMQFIKP +ST C+G AASMGSLLL+AG KG RF+LPN+ +
Sbjct: 61 HLYINSPGGSVTAGMGIFDTMQFIKPDVSTICVGMAASMGSLLLTAGAKGKRFSLPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ HA I+K K++LN+IYV+ G+ YE++E+ DRD+ +SA EA
Sbjct: 121 MIHQPLGGVRGQASDIKIHADWIIKTKQKLNQIYVERTGQPYEKIERDTDRDNFLSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++DKV+ S
Sbjct: 181 VAYGLIDKVVTS 192
>gi|288958758|ref|YP_003449099.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
gi|288911066|dbj|BAI72555.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
Length = 208
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 126/200 (63%), Positives = 163/200 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D E LVPMV+EQTNRGER+YDIYSRLLKERI+F+ G + D +A+LIC+QLLFLE+E
Sbjct: 3 DFEPKMNALVPMVIEQTNRGERAYDIYSRLLKERIIFLIGGVNDAVASLICSQLLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I+LYINSPGG V+AG+AIYDTMQ+I+P +ST CMGQAASMGSLLL+AG G RF+
Sbjct: 63 NPNKDIALYINSPGGYVSAGLAIYDTMQYIRPQVSTVCMGQAASMGSLLLAAGAPGKRFS 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQPSGG GQASDIE AQ+I+K++ RLN+IYVK+ G+ + +E ++RD
Sbjct: 123 LPNSRIMIHQPSGGAQGQASDIEIQAQEILKLRSRLNDIYVKHTGQDLDTIETAMERDKF 182
Query: 190 MSASEACDWGVVDKVLMSRI 209
MS EA +G++D+V+ R
Sbjct: 183 MSPEEAKAFGLIDEVVEKRP 202
>gi|262276278|ref|ZP_06054087.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
gi|262220086|gb|EEY71402.1| ATP-dependent Clp protease proteolytic subunit [Grimontia hollisae
CIP 101886]
Length = 207
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 129/209 (61%), Positives = 164/209 (78%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MSF+ K + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSFQ--EKNGMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQ+IKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQYIKPDVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK RLN + ++ G+ E +
Sbjct: 119 GGAKGKRYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKHRLNTLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ M+A +A ++G+VD VL R
Sbjct: 179 ERDTDRDNFMAAQDAVNYGLVDAVLNKRD 207
>gi|117926916|ref|YP_867533.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
sp. MC-1]
gi|254763794|sp|A0LDT4|CLPP_MAGSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117610672|gb|ABK46127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Magnetococcus
sp. MC-1]
Length = 202
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 166/201 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVE TNRGER+YDIYSRLLKER+VF+ GQ+E+HMA L+ AQLLFLE+ENP+K+I
Sbjct: 1 MSLVPMVVETTNRGERAYDIYSRLLKERVVFLVGQVEEHMANLVVAQLLFLESENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFI+P +ST C+GQAASMG++LL+AGE G R LPNAR+
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIRPSVSTLCIGQAASMGAVLLAAGEAGKRLVLPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGFSGQASD E HA++I++I+ LN++ + GK E+V+ +RD+ +SA+EA
Sbjct: 121 MIHQPLGGFSGQASDFEIHAREILRIRENLNQVLSHHTGKPLEQVQLDTERDNFLSATEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G+VDKV+ R E +++
Sbjct: 181 VEYGLVDKVISHRELPEAEAE 201
>gi|60389557|sp|Q6AK59|CLPP_DESPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 203
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 160/197 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQT RGERSYDIYSRLLKERI+F+ + D +A +I AQLLFLEAE+P+K+I
Sbjct: 1 MNLIPMVVEQTPRGERSYDIYSRLLKERIIFLGSGVNDDVANVIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG VTAGMAIYDTMQ+IK I+T CMGQAASMG++LL+AG G R+ALPN+RI
Sbjct: 61 TFYINSPGGSVTAGMAIYDTMQYIKCDIATLCMGQAASMGAVLLAAGTAGKRYALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE H ++I++I++ LN I + GKT +++E +RD+ MS+ EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHTKEILRIRKDLNNILAHHTGKTLKKIESDTERDNFMSSVEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
+G++D+VL+ R D+E
Sbjct: 181 QKYGLIDEVLVKREDVE 197
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
Length = 205
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 111/202 (54%), Positives = 159/202 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VPMVVE ++RGER+YDIYSRLLKERI+F+ G I+D +A ++ AQ+LFLE+E+P K+
Sbjct: 1 MSYYVPMVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS+LL+AG KG R+ALP+AR
Sbjct: 61 IHLYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQ++DI+ A++I++++ NEI ++ G+ +++ +RD+ MSA E
Sbjct: 121 IMIHQPLGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKSK 216
A +G++D+V++ ++SK
Sbjct: 181 AKAYGLIDEVVVRPPAASKESK 202
>gi|77463765|ref|YP_353269.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides 2.4.1]
gi|126462595|ref|YP_001043709.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides ATCC 17029]
gi|221639635|ref|YP_002525897.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides KD131]
gi|124013827|sp|Q3J1G6|CLPP_RHOS4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214702|sp|A3PKS1|CLPP_RHOS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763798|sp|B9KJU9|CLPP_RHOSK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77388183|gb|ABA79368.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodobacter
sphaeroides 2.4.1]
gi|126104259|gb|ABN76937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodobacter
sphaeroides ATCC 17029]
gi|221160416|gb|ACM01396.1| ATP-dependent Clp protease proteolytic subunit [Rhodobacter
sphaeroides KD131]
Length = 210
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 133/210 (63%), Positives = 178/210 (84%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT+RGER+YDIYSR+LKERI+F++G + D M++LICAQLLFL
Sbjct: 1 MKDPIDLYMNTLVPMVVEQTSRGERAYDIYSRMLKERIIFLSGPVHDGMSSLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEI++YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPSKEIAMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HA++ K+KRRLNEIYV++ G+ E VE L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHARETEKLKRRLNEIYVRHTGQDLETVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ MSA +A WG++D++L SR ++ +K
Sbjct: 181 DNFMSAEDAKAWGLIDEILESRNRPDDTAK 210
>gi|120599414|ref|YP_963988.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
W3-18-1]
gi|146292590|ref|YP_001183014.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
putrefaciens CN-32]
gi|166214710|sp|A4Y5I2|CLPP_SHEPC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214712|sp|A1RL89|CLPP_SHESW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120559507|gb|ABM25434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
W3-18-1]
gi|145564280|gb|ABP75215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens CN-32]
gi|319425892|gb|ADV53966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens 200]
Length = 202
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERSYDIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQNALVPMVIEQTAKGERSYDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DRD
Sbjct: 121 FCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A ++G+VD V+ R
Sbjct: 181 NFMSATQAVEYGLVDSVMTKR 201
>gi|261855007|ref|YP_003262290.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Halothiobacillus neapolitanus c2]
gi|261835476|gb|ACX95243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothiobacillus neapolitanus c2]
Length = 210
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 132/199 (66%), Positives = 161/199 (80%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
S LVPMVVEQT+RGER+YDIYSRLLKER+VFV G IEDHMA LI AQLLFLE+EN
Sbjct: 12 SSPELAALVPMVVEQTSRGERAYDIYSRLLKERVVFVVGPIEDHMANLIVAQLLFLESEN 71
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGGVVTAGM+IYDTMQFIKP +ST C+GQAASMGS+LLS GE G RFAL
Sbjct: 72 PDKDIHLYINSPGGVVTAGMSIYDTMQFIKPHVSTLCIGQAASMGSILLSGGEPGKRFAL 131
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+R+++HQP GGF GQASDI+ HA++I+K++ LN + K+C + E +E+ DRD +
Sbjct: 132 PNSRVMIHQPLGGFQGQASDIKIHAEEIIKLRHSLNGVLAKHCNQPMEVIERDTDRDKFL 191
Query: 191 SASEACDWGVVDKVLMSRI 209
SASEA ++G++D VL R
Sbjct: 192 SASEAVEYGLIDAVLDKRA 210
>gi|154506030|ref|ZP_02042768.1| hypothetical protein RUMGNA_03572 [Ruminococcus gnavus ATCC 29149]
gi|153793529|gb|EDN75949.1| hypothetical protein RUMGNA_03572 [Ruminococcus gnavus ATCC 29149]
Length = 193
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEA++P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IK +ST C+G AASMG+ LLS G KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I A+ I++ +++LNEI N G+ E ++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEISIAAEHILRTRQKLNEIMAANTGQPLETIKADTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D+V+
Sbjct: 181 KAYGLIDEVIAK 192
>gi|77919287|ref|YP_357102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 244 bits (624), Expect = 5e-63, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 156/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQT RGER+YDI+SRLLK+RI+F+ G ++D +A LI AQ+LFLE+E+P+KEI
Sbjct: 1 MSLIPMVVEQTGRGERAYDIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTMQ+++ P+ST C+GQAASMG++LL+AG +G RFALP+ARI
Sbjct: 61 FLYINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HAQ+I++++ LN + + G+T E++ +RD M + EA
Sbjct: 121 MIHQPWGGFQGQATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD ++ +
Sbjct: 181 KKYGIVDDIVKRK 193
>gi|310657900|ref|YP_003935621.1| clpa-clpp and clpx-clpp ATP-dependent serine protease proteolytic
subunit [Clostridium sticklandii DSM 519]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Clostridium sticklandii]
Length = 194
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 113/194 (58%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT RGERSYDIYSRLLK+RI+F+ Q+ DH A+LI AQLL LE+E+P K+I
Sbjct: 1 MAYVPIVIEQTGRGERSYDIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP ++T C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSITAGMAIYDTMQYIKPDVATICVGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I++++ +LNEI G+ E++E+ +RD MS++EA
Sbjct: 121 MIHQPLGGTQGQATDIKIHAERIIRMRNKLNEIMADRSGQPLEKIERDTERDFFMSSTEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+VL R
Sbjct: 181 KEYGLIDEVLEKRP 194
>gi|30248062|ref|NP_840132.1| Clp protease [Nitrosomonas europaea ATCC 19718]
gi|60389763|sp|Q82Y57|CLPP_NITEU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|30179947|emb|CAD83942.1| Clp protease [Nitrosomonas europaea ATCC 19718]
Length = 214
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 118/206 (57%), Positives = 160/206 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + LGL+PMV+E + RGER+YDIYSRLL+ERI+F+ G + + A L+ AQLLFLE
Sbjct: 9 RNGLDTTGLGLIPMVIETSGRGERAYDIYSRLLRERIIFLVGPVTETSANLVIAQLLFLE 68
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+EN +K+I LYINSPGG+VTAG+A+YDT+QFIKP +ST C+GQAASMG+ LL+AG KG R
Sbjct: 69 SENSEKDIFLYINSPGGLVTAGLAVYDTIQFIKPDVSTLCVGQAASMGAFLLTAGAKGKR 128
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ LPN+R+++HQP GGF GQASDIE HA++I+ +K RLNEI K+ G+T + +E+ DRD
Sbjct: 129 YCLPNSRVMIHQPLGGFQGQASDIEIHAKEILALKSRLNEIMAKHTGQTVKAIERDTDRD 188
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEE 213
+ + A A +G+VD VL SR +E
Sbjct: 189 NFLGAEAAVKYGLVDAVLTSREVKQE 214
>gi|307942062|ref|ZP_07657413.1| Clp protease [Roseibium sp. TrichSKD4]
gi|307774348|gb|EFO33558.1| Clp protease [Roseibium sp. TrichSKD4]
Length = 211
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 140/210 (66%), Positives = 181/210 (86%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQTNRGERS+DIYSRLLKERI+F+TG IEDH+ATL+CAQLLFL
Sbjct: 1 MKDPADIYMNTLVPMVVEQTNRGERSFDIYSRLLKERIIFLTGPIEDHVATLVCAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EA+NP KEI++YINSPGG+VT+G+AIYDTMQFI+P +ST C+GQAASMGSLLL+ GEK M
Sbjct: 61 EADNPSKEIAIYINSPGGLVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLAGGEKDM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPNAR+++HQPSGGF GQA+DI HAQ+I+ +KRRLNEIYVK+ G++ +EVE+ L+R
Sbjct: 121 RFSLPNARVMVHQPSGGFRGQAADIMLHAQEILAMKRRLNEIYVKHTGQSLDEVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A +A ++G+VD V+ R + S+
Sbjct: 181 DNFMTAEKAKEFGIVDSVITDRASLHSDSE 210
>gi|24373360|ref|NP_717403.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
oneidensis MR-1]
gi|60389791|sp|Q8EG19|CLPP_SHEON RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24347620|gb|AAN54847.1|AE015623_9 ATP-dependent Clp protease, proteolytic subunit [Shewanella
oneidensis MR-1]
Length = 202
Score = 244 bits (623), Expect = 5e-63, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERS+DIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN++ + G+ E +E+ DRD
Sbjct: 121 FCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A ++G+VD V+ R
Sbjct: 181 NFMSATQAVEYGLVDAVMTKR 201
>gi|257093849|ref|YP_003167490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046373|gb|ACV35561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 209
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 119/200 (59%), Positives = 157/200 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
LGLVPMV+EQ+ RGER+YDIYSRLLKER+VF+ G + D A L+ AQLLFLEAENP
Sbjct: 10 NPQALGLVPMVIEQSGRGERAYDIYSRLLKERVVFLVGPVNDVTANLVVAQLLFLEAENP 69
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I YINSPGG V+AG+++YDTMQFIKP +ST CMGQA SMG+ LL+AG +G RFALP
Sbjct: 70 DKDIHFYINSPGGSVSAGLSVYDTMQFIKPDVSTLCMGQACSMGAFLLAAGTRGKRFALP 129
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GGF GQASDI HA++I+ ++ +LNE+ + G+ E +E+ DRD+ +S
Sbjct: 130 NSRVMIHQPMGGFQGQASDIAIHAKEILSLRAKLNELMALHTGQEIERIERDTDRDNFLS 189
Query: 192 ASEACDWGVVDKVLMSRIDI 211
A EA ++G++DKVL +R I
Sbjct: 190 AQEAAEYGLIDKVLANREAI 209
>gi|90417350|ref|ZP_01225275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2207]
gi|90330792|gb|EAS46061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2207]
Length = 213
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 129/211 (61%), Positives = 166/211 (78%), Gaps = 1/211 (0%)
Query: 1 MSFEGCAKKDSEDV-FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
M+F+ + DV GLVPMVVEQT+RGER+YDIYSRLLKER++F+ GQ+EDHMA LI
Sbjct: 1 MNFQQPYAGHTHDVQASGLVPMVVEQTSRGERAYDIYSRLLKERVIFLVGQVEDHMANLI 60
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQ+LFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL
Sbjct: 61 VAQMLFLESENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPNVSTMCIGQAASMGAFLL 120
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
+AG +G R+ LPN+R ++HQPSGG GQA+DI +Q+I+KIK RLN + K+ G++ E+
Sbjct: 121 AAGAEGKRYCLPNSRTMIHQPSGGAQGQATDIHIQSQEILKIKSRLNNLMAKHTGQSVEK 180
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
V + +RD+ MSA E+ +G+VD VL SR
Sbjct: 181 VTEDTERDNFMSAEESKAYGLVDDVLDSREQ 211
>gi|291550775|emb|CBL27037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
torques L2-14]
Length = 193
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 114/192 (59%), Positives = 155/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEA++P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IK +ST C+G AASMG+ LLS G+KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I++ K++LNEI N GK E +++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKKKLNEILAANTGKPLEVIQQDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+++
Sbjct: 181 KEYGLIDEVIVN 192
>gi|262277075|ref|ZP_06054868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [alpha
proteobacterium HIMB114]
gi|262224178|gb|EEY74637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [alpha
proteobacterium HIMB114]
Length = 204
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 131/203 (64%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMV+EQT RGERS+DIYSRLLKERI+F+TG I ++++L+ AQLLFL
Sbjct: 1 MKDPFDIYMNTLVPMVIEQTPRGERSFDIYSRLLKERIIFLTGPINSYISSLVSAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+EN KEI LYINSPGGVVT G+AIYDTMQFIKP +ST C+GQAASMGS LL+AGEKG+
Sbjct: 61 ESENNSKEIYLYINSPGGVVTDGLAIYDTMQFIKPTVSTLCIGQAASMGSFLLAAGEKGL 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPNARI++HQPS GF GQA+DIE H ++I+ K+RLNEIY K+ G+T E +++ L+R
Sbjct: 121 RMSLPNARIMVHQPSAGFQGQATDIEIHTKEILSTKKRLNEIYSKHTGQTVETIKEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ MSA EA +G+VDKV+ R
Sbjct: 181 DNFMSAEEAKKFGLVDKVVEKRD 203
>gi|302035647|ref|YP_003795969.1| ATP-dependent Clp protease proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
gi|300603711|emb|CBK40042.1| ATP-dependent Clp protease, proteolytic subunit clpP [Candidatus
Nitrospira defluvii]
Length = 211
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 158/190 (83%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+EQTNRGER+YDIYSRLLK+RI+F+ I+D A LI AQLLFLEAE+P+K+I+L
Sbjct: 2 LVPIVIEQTNRGERAYDIYSRLLKDRIIFLGAPIDDVFANLIIAQLLFLEAEDPEKDINL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQ++KP I+T C+GQAASMG+ LL+AG KG R+ALPNAR+++
Sbjct: 62 YINSPGGSVTAGLGIYDTMQYVKPAINTICLGQAASMGAFLLTAGTKGKRYALPNARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA++I+ HA++I+KI+ RLNEI K+ G+ +++ + +RD+ MS+ EA
Sbjct: 122 HQPMGGFQGQATEIDIHAREILKIRERLNEIMAKHTGQPLDKISQDTERDYFMSSEEAKR 181
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 182 YGLIDEVITR 191
>gi|89900346|ref|YP_522817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
gi|89345083|gb|ABD69286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodoferax
ferrireducens T118]
Length = 209
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 111/209 (53%), Positives = 157/209 (75%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS + LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G + D++A L+
Sbjct: 1 MSLPNMMMGAMQTQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDYVANLVV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE++NP K+IS YINSPGG V+AGMAI+DTM F+KP +ST C G AASMG+ LL+
Sbjct: 61 AQLLFLESDNPDKDISFYINSPGGSVSAGMAIFDTMNFVKPDVSTLCTGMAASMGAFLLA 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF+LPN+++++HQPSGG GQA++IE A++I+K + +LN+I + G+ +
Sbjct: 121 AGAKGKRFSLPNSKVMIHQPSGGSQGQATEIEIQAREILKTREQLNKILAERTGQPLARI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD+ MSA E ++G++D+V+ R
Sbjct: 181 ERDTERDYYMSADECKEYGLIDQVISKRA 209
>gi|319404099|emb|CBI77689.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
rochalimae ATCC BAA-1498]
gi|319407112|emb|CBI80749.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella sp.
1-1C]
Length = 210
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 148/209 (70%), Positives = 179/209 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMVVEQTNRGER+YDI+SRLLKERI+F+ G +ED+MA L+CAQLLFLE
Sbjct: 1 MSDPVKKVLSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDNMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFI+P +ST CMGQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEINLYINSPGGVVTSGMAIYDTMQFIRPSVSTLCMGQAASMGSLLLTAGATGRR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNEIYV++ G++YE +E TLDRD
Sbjct: 121 FALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNEIYVQHTGQSYEVIENTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A E+ +G++D V+ R + E++ K
Sbjct: 181 HFMTAEESKQFGLIDDVIQYRAETEKEEK 209
>gi|239815493|ref|YP_002944403.1| ATP-dependent Clp protease proteolytic subunit [Variovorax
paradoxus S110]
gi|259491242|sp|C5CJT4|CLPP_VARPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239802070|gb|ACS19137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus S110]
Length = 202
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG++PMV+EQ+ RGERSYDIYSRLLKERI+F+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LGMIPMVIEQSGRGERSYDIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG V+AGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RF+LPN++I
Sbjct: 69 SFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNSKI 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ GG GQA+DIE HA+DI++ K ++N I + G+ E+V+ +RD+ ++A EA
Sbjct: 129 MIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYFLTADEA 188
Query: 196 CDWGVVDKVLMSRI 209
D+G+VD+V+ R
Sbjct: 189 KDYGLVDQVIAKRS 202
>gi|254785725|ref|YP_003073154.1| ATP-dependent Clp protease proteolytic subunit [Teredinibacter
turnerae T7901]
gi|259585966|sp|C5BTJ0|CLPP_TERTT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|237684355|gb|ACR11619.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Teredinibacter turnerae T7901]
Length = 214
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 138/214 (64%), Positives = 163/214 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS S + LVP+VVEQT RGERSYDIYSRLLKER++F+ GQ+EDHMA L+
Sbjct: 1 MSQFNPMGGQSTTIQSSLVPIVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLVV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMGS LLS
Sbjct: 61 AQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGSFLLS 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G RF LPNAR ++HQPSGG GQASDI HAQ+I+KI+ RLNEI K+ GK+ EEV
Sbjct: 121 AGATGKRFCLPNARTMIHQPSGGAQGQASDIHIHAQEILKIRARLNEIMAKHTGKSVEEV 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ +RD+ MSA E+ +G+VD VL R+ E K
Sbjct: 181 ARDTERDNFMSAEESKAYGLVDDVLYQRVPEESK 214
>gi|160947717|ref|ZP_02094884.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
gi|158446851|gb|EDP23846.1| hypothetical protein PEPMIC_01652 [Parvimonas micra ATCC 33270]
Length = 192
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 118/192 (61%), Positives = 158/192 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQTNRGERSYDIYSRLLKERI+F++G++ D MA LI AQLLFLE+E+P+K+I
Sbjct: 1 MALIPMVVEQTNRGERSYDIYSRLLKERIIFLSGEVNDQMADLIVAQLLFLESEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYDTMQ+IKP +ST C+G+AASMG+ LL++G KG RFALPNA I
Sbjct: 61 QIYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGRAASMGAFLLTSGAKGKRFALPNADI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DI+ AQ I++++ LNEI K G++ +++EK DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQAEDIKIQAQKILQVRATLNEILAKRTGQSLKKIEKDTDRDFYMSAYEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+ +
Sbjct: 181 KEYGIIDEVIEN 192
>gi|114707244|ref|ZP_01440142.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi
HTCC2506]
gi|114537440|gb|EAU40566.1| ATP-dependent Clp protease proteolytic subunit [Fulvimarina pelagi
HTCC2506]
Length = 217
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 149/209 (71%), Positives = 181/209 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K + + LVPMVVEQTNRGER+YDI+SRLLKER++F+TG IED MATL+CAQLLFLE
Sbjct: 1 MKHPIETAMNLVPMVVEQTNRGERAYDIFSRLLKERVIFITGPIEDSMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFI+P ++T C+GQAASMGSLLL AGEK MR
Sbjct: 61 AENPKKEIALYINSPGGVVTSGMAIYDTMQFIRPAVTTLCIGQAASMGSLLLCAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNE YVK+ G+ YE +E+TLDRD
Sbjct: 121 FATPNARIMVHQPSGGFQGQASDIERHAQDIIKLKRRLNETYVKHTGQDYETIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A E+ ++G++DKV SR++ E +
Sbjct: 181 HFMTAEESLEFGLIDKVYSSRVEQEGTDR 209
>gi|15603841|ref|NP_246915.1| ATP-dependent Clp protease proteolytic subunit [Pasteurella
multocida subsp. multocida str. Pm70]
gi|18202809|sp|Q9CJM2|CLPP_PASMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12722415|gb|AAK04060.1| ClpP [Pasteurella multocida subsp. multocida str. Pm70]
Length = 193
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT RGERSYDIYSRLLKER++F+ G++ED MA LI AQLLFLE+E+P+K+I
Sbjct: 1 MSVIPMVVEQTARGERSYDIYSRLLKERVIFLGGEVEDRMANLIVAQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQF+KP I T C+GQA SMG+ LL+ G G R ALP+AR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFVKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPSARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G+T E +E+ DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQTIERIERDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL SR
Sbjct: 181 KAYGLVDEVLASR 193
>gi|59711403|ref|YP_204179.1| ATP-dependent Clp protease proteolytic subunit [Vibrio fischeri
ES114]
gi|197335304|ref|YP_002155557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
fischeri MJ11]
gi|67460143|sp|Q5E6Q5|CLPP_VIBF1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706555|sp|B5FBZ8|CLPP_VIBFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|59479504|gb|AAW85291.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Vibrio fischeri ES114]
gi|197316794|gb|ACH66241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Vibrio
fischeri MJ11]
Length = 207
Score = 244 bits (623), Expect = 6e-63, Method: Composition-based stats.
Identities = 127/209 (60%), Positives = 162/209 (77%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--ENNAMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKKKLNTLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ DRD+ MSA +A +G+VD VL R
Sbjct: 179 EQDTDRDNFMSADDAVKYGLVDAVLNKRD 207
>gi|304395499|ref|ZP_07377382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
gi|304356793|gb|EFM21157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pantoea sp.
aB]
Length = 207
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 133/209 (63%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--DREYTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQASDIE HA++I+K+K+R+NE+ ++ GKT EE+
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSASEAVEYGLVDSILTHRQ 207
>gi|90419399|ref|ZP_01227309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas
manganoxydans SI85-9A1]
gi|90336336|gb|EAS50077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aurantimonas
manganoxydans SI85-9A1]
Length = 210
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 151/207 (72%), Positives = 180/207 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + LVPMVVEQTNRGER+YDI+SRLLKER++F+TG IED MATL+CAQLLFLE
Sbjct: 1 MTHPVETAMNLVPMVVEQTNRGERAYDIFSRLLKERVIFITGPIEDSMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVT+GMAIYDTMQFIKP +ST C+GQAASMGSLLL AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTSGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLCAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGFSGQASDIERHAQDI+K+KRRLNE+YV++ G+ YE VE+TLDRD
Sbjct: 121 FATPNARIMVHQPSGGFSGQASDIERHAQDIIKLKRRLNEVYVEHTGQDYETVERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
H M+A EA ++G++DKV SR +E +
Sbjct: 181 HFMTAQEAREFGLIDKVYSSRDALEAE 207
>gi|186475776|ref|YP_001857246.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phymatum STM815]
gi|184192235|gb|ACC70200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phymatum STM815]
Length = 219
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 123/209 (58%), Positives = 159/209 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++ + +D E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+
Sbjct: 11 LTSQSSRDRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERVVFLVGEVNDQTANLVI 70
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+IS YINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL+
Sbjct: 71 AQLLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLA 130
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RFALPNAR+++HQP GG GQASDIE A++I+ +K RLN++ + G+ E +
Sbjct: 131 AGAKGKRFALPNARVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLSHHTGQPVERI 190
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ DRD+ MS +A +G+VD+VL R
Sbjct: 191 QRDTDRDNFMSGDDAQAYGLVDQVLHKRP 219
>gi|153854553|ref|ZP_01995823.1| hypothetical protein DORLON_01818 [Dorea longicatena DSM 13814]
gi|149752862|gb|EDM62793.1| hypothetical protein DORLON_01818 [Dorea longicatena DSM 13814]
Length = 193
Score = 244 bits (623), Expect = 7e-63, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 149/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK I T C+G AASMGS LL+ G KG R ALPN+ I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKCDIETICIGMAASMGSFLLTGGTKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A I+K +++LN+I +N G+ E + +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAADHILKTRQKLNQILAENTGQPLEVINADTERDNFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D+V+ SR
Sbjct: 181 KAYGLIDEVIKSR 193
>gi|308185908|ref|YP_003930039.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
gi|308056418|gb|ADO08590.1| ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Pantoea vagans C9-1]
Length = 207
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--DREYTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQASDIE HA++I+K+K+R+NE+ ++ GKT EE+
Sbjct: 119 AGTKGKRFCLPNSRVMIHQPLGGYQGQASDIEIHAREILKVKQRMNELMAEHTGKTLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA+EA ++G+VD +L R
Sbjct: 179 ERDTERDRFLSANEAVEYGLVDSILTHRQ 207
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 117/202 (57%), Positives = 163/202 (80%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD + + LVP+V+EQT RGER+YDIYSRLLK+RI+ + I+DH+A LI AQLLFL
Sbjct: 1 MSKDLDSIVSQLVPIVIEQTPRGERAYDIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P+K+I +YINSPGGVVT+G+AIYDTM++IKP + T CMGQAASMG+ LLSAG KG
Sbjct: 61 ESEDPEKDIYMYINSPGGVVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ALP++RI++HQP GGF GQA+DIE HA++I+++K+ LNE ++ G+ E++E+ +R
Sbjct: 121 RYALPSSRIMIHQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTER 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D MSA +A ++G++DKV+ R
Sbjct: 181 DFFMSAHDAVEYGLIDKVIEKR 202
>gi|291616549|ref|YP_003519291.1| ClpP [Pantoea ananatis LMG 20103]
gi|291151579|gb|ADD76163.1| ClpP [Pantoea ananatis LMG 20103]
gi|327392981|dbj|BAK10403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pantoea
ananatis AJ13355]
Length = 218
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 172/209 (82%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++ LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 12 MSYSG--DREFTAPHNALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLIV 69
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMG+ LL+
Sbjct: 70 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGAFLLT 129
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K+R+NE+ ++ GK+ EE+
Sbjct: 130 AGTKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKQRMNELMAEHTGKSLEEI 189
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASEA ++G+VD +L R
Sbjct: 190 ERDTERDRFLSASEAVEYGLVDSILTHRQ 218
>gi|160898086|ref|YP_001563668.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
gi|160363670|gb|ABX35283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Delftia
acidovorans SPH-1]
Length = 202
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 113/202 (55%), Positives = 155/202 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLK+R++F+ G + D A L+ AQLLFLE
Sbjct: 1 MSALETQGLGMIPMVIEQSGRGERSYDIYSRLLKDRVIFLVGPVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG V+AG+AI+DTM FIKP +ST C G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVSAGLAIFDTMNFIKPDVSTLCTGIAASMGAFLLAAGTKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+++++HQP GG GQA++IE HA++I+K + RLN+I + G+ E+++ +RD
Sbjct: 121 FALPNSQVMIHQPLGGMQGQATEIEIHAREILKTRERLNKILAERTGQPLEKIQHDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ +SA EA D+G+VD+V+ R
Sbjct: 181 YFLSAEEAKDYGLVDQVINKRS 202
>gi|225573066|ref|ZP_03781821.1| hypothetical protein RUMHYD_01257 [Blautia hydrogenotrophica DSM
10507]
gi|225039572|gb|EEG49818.1| hypothetical protein RUMHYD_01257 [Blautia hydrogenotrophica DSM
10507]
Length = 193
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 146/193 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGER+YDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLE+E+ K+I
Sbjct: 1 MSLVPYVVEQTSRGERNYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLESEDAGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G KG R ALPN+ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGLAASMGAFLLAGGAKGKRIALPNSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I K KR LNEI N G+ E VE DRD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAKTKRTLNEILAANTGQPLEVVEVDTDRDNYMSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++DK++ R
Sbjct: 181 QAYGLIDKIITHR 193
>gi|116243166|sp|Q1GGF6|CLPP_SILST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 210
Score = 244 bits (622), Expect = 7e-63, Method: Composition-based stats.
Identities = 126/207 (60%), Positives = 173/207 (83%), Gaps = 1/207 (0%)
Query: 10 DSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEA
Sbjct: 3 DPTETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEA 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMRF
Sbjct: 63 ENPSKEISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRF 122
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPN+R+++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYVK+ G+ Y+ +EK L+RD+
Sbjct: 123 SLPNSRVMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVKHTGQDYDTIEKALERDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
MS +A ++G++D+++ +R ++
Sbjct: 183 FMSPEQAKEFGLIDEIVENRSKADDAE 209
>gi|295109356|emb|CBL23309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
obeum A2-162]
Length = 193
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 150/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSASIIVAQLLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM++IK +ST C+G AASMG+ LL+ G KG R+ALP++ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMKYIKCDVSTICLGMAASMGAFLLAGGTKGKRYALPHSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I + KR LNEI +N G+ YE VEK DRD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAQTKRTLNEILAENTGQPYEVVEKDTDRDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ +
Sbjct: 181 KAYGLIDGVVEHK 193
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
tusciae DSM 2912]
Length = 196
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 110/191 (57%), Positives = 150/191 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQ++RGER+YDIYSRLLK+RI+F+ I+D +A L+ AQLLFL AE+ +K+I
Sbjct: 1 MSLVPMVIEQSSRGERAYDIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 RLYINSPGGSITAGMAIYDTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA I++ K ++N I + G+ E++E+ DRD+ M A EA
Sbjct: 121 MIHQPLGGVRGQAADIKIHADWILRTKDKINRILSERTGQPLEKIERDTDRDNFMDAEEA 180
Query: 196 CDWGVVDKVLM 206
+G++D+V+
Sbjct: 181 KAYGLIDEVIS 191
>gi|300114126|ref|YP_003760701.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
watsonii C-113]
gi|299540063|gb|ADJ28380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
watsonii C-113]
Length = 203
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 122/199 (61%), Positives = 158/199 (79%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT RGER+YDIYSRLLKER+VF+ G +EDHMA L+ AQLLFLE+ENP
Sbjct: 3 DSLNTLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPD 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAG++IYDTMQFIKP +ST C+GQAASMG++LL+ G G R LP+
Sbjct: 63 KDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTLCVGQAASMGAVLLAGGAPGKRHCLPH 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+L+HQP GGF GQA+DI+ HA++I+ ++ RLN I K+ G+ E+++ DRD+ MSA
Sbjct: 123 SRLLIHQPLGGFQGQATDIDIHAREILLVRERLNHILAKHTGQPIEKIQHDTDRDYFMSA 182
Query: 193 SEACDWGVVDKVLMSRIDI 211
+E+ +G+VD VL R +I
Sbjct: 183 TESLAYGLVDSVLKQRTEI 201
>gi|288549991|ref|ZP_05968896.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
gi|288316903|gb|EFC55841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterobacter
cancerogenus ATCC 35316]
Length = 194
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 126/194 (64%), Positives = 166/194 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G++ E++E+ +RD +SA EA
Sbjct: 121 MIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQSLEQIERDTERDRFLSAPEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD VL R
Sbjct: 181 VEYGLVDSVLTHRN 194
>gi|190573022|ref|YP_001970867.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia K279a]
gi|194364614|ref|YP_002027224.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia R551-3]
gi|226706475|sp|B2FQR2|CLPP_STRMK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|190010944|emb|CAQ44553.1| ATP-dependent clp protease proteolytic subunit [Stenotrophomonas
maltophilia K279a]
gi|194347418|gb|ACF50541.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas maltophilia R551-3]
Length = 208
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 167/201 (83%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D+ L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA ++ AQLLFLE+E
Sbjct: 2 DNRTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+I++YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL+AGE G R+A
Sbjct: 62 NPEKDINIYINSPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GG+ GQA+DI+ HA++I+ ++ RLNE+ K+ G++ E + + +RD+
Sbjct: 122 LPNSRVMIHQPLGGYQGQATDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA EA +G+VD+VL R D
Sbjct: 182 KSAFEAQAYGLVDQVLERRPD 202
>gi|296136117|ref|YP_003643359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
gi|295796239|gb|ADG31029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiomonas
intermedia K12]
Length = 202
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 118/194 (60%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMV+EQ+ RGER+YDIYSRLL+ER++F+ G I D MA L+ AQLLFLE+ENP K+I
Sbjct: 9 LGLVPMVIEQSGRGERAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AGMAI+DTMQFIKP +ST C G AASMG+ L++AG KG R++LPN+RI
Sbjct: 69 SLYINSPGGSVSAGMAIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNSRI 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DIE A++I+ ++ RLN I + G+T E++ +RD MSA EA
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSAEEA 188
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+V+ R
Sbjct: 189 KDYGLIDEVISKRS 202
>gi|152968972|ref|YP_001334081.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|262042473|ref|ZP_06015632.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|330011533|ref|ZP_08307119.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
gi|150953821|gb|ABR75851.1| ATP-dependent Clp protease proteolytic subunit [Klebsiella
pneumoniae subsp. pneumoniae MGH 78578]
gi|259040177|gb|EEW41289.1| ATP-dependent Clp protease [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
gi|328534150|gb|EGF60785.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Klebsiella sp. MS 92-3]
Length = 194
Score = 244 bits (622), Expect = 8e-63, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 166/194 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++E+ +RD +SA+EA
Sbjct: 121 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAAEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD +L R
Sbjct: 181 VEYGLVDSILTHRN 194
>gi|192360657|ref|YP_001982472.1| ATP-dependent Clp protease proteolytic subunit [Cellvibrio
japonicus Ueda107]
gi|190686822|gb|ACE84500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cellvibrio
japonicus Ueda107]
Length = 214
Score = 244 bits (622), Expect = 9e-63, Method: Composition-based stats.
Identities = 124/215 (57%), Positives = 162/215 (75%), Gaps = 1/215 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ + + GLVP+V+EQT RGERS+DIYSRLLKER++F+ G +ED+MA L+
Sbjct: 1 MSYDYPKSQSPI-INSGLVPIVIEQTARGERSFDIYSRLLKERVIFLVGPVEDYMANLVV 59
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+
Sbjct: 60 AQLLFLEAENPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGAFLLN 119
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G RF LPN+R+++HQPSGG GQASDI AQ+I+KI+ RLNE+ + G+ E +
Sbjct: 120 AGAEGKRFCLPNSRVMIHQPSGGAQGQASDIHIQAQEILKIRARLNELMAHHSGQPIERI 179
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
E +RD+ MSA +A D+G++D V+ RI
Sbjct: 180 EVDTERDNFMSAQQAKDYGLIDAVVEKRIMTTSTK 214
>gi|255102472|ref|ZP_05331449.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
Length = 194
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 152/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT RGERSYDI+SRLLK+RI+F+ Q+ D A LI AQLLFLEAE+P K+I
Sbjct: 1 MALVPVVVEQTGRGERSYDIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R ALPN+ I
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA+ I+KIK LNEI+ + G+ E+++ +RD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAKRILKIKETLNEIFSERTGQPLEKIKMDTERDNFMSALEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V R
Sbjct: 181 KEYGLIDEVFTKRP 194
>gi|170751514|ref|YP_001757774.1| endopeptidase Clp [Methylobacterium radiotolerans JCM 2831]
gi|226706463|sp|B1LW28|CLPP_METRJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170658036|gb|ACB27091.1| Endopeptidase Clp [Methylobacterium radiotolerans JCM 2831]
Length = 208
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 131/204 (64%), Positives = 172/204 (84%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D DV+ LVPMVVEQ++RGER++DIYSRLL+ERI+F+TG +ED+ A+LI AQLLFL
Sbjct: 1 MRDPIDVYNNALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYGASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+GQAASMGSLLL+AGE G
Sbjct: 61 EAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLTAGEPGH 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQA+DI HA++I +KRRLNEIYVK+ G+ Y+ + L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDTIHTALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A A ++G++D+V+ R +
Sbjct: 181 DNFMTADAAKEFGLIDEVIEKRPE 204
>gi|22124934|ref|NP_668357.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis KIM
10]
gi|45440623|ref|NP_992162.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Microtus str. 91001]
gi|51595309|ref|YP_069500.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 32953]
gi|108808643|ref|YP_652559.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Antiqua]
gi|108811098|ref|YP_646865.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Nepal516]
gi|145600052|ref|YP_001164128.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Pestoides F]
gi|149364997|ref|ZP_01887032.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|153950622|ref|YP_001402052.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis IP 31758]
gi|162419837|ref|YP_001607420.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Angola]
gi|165926613|ref|ZP_02222445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165935884|ref|ZP_02224454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|166010967|ref|ZP_02231865.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166212961|ref|ZP_02238996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|167398957|ref|ZP_02304481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167421692|ref|ZP_02313445.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167423463|ref|ZP_02315216.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|170025451|ref|YP_001721956.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis YPIII]
gi|186894326|ref|YP_001871438.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
pseudotuberculosis PB1/+]
gi|218930187|ref|YP_002348062.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
CO92]
gi|229838761|ref|ZP_04458920.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229896085|ref|ZP_04511255.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|229899329|ref|ZP_04514472.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229901327|ref|ZP_04516449.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|270489513|ref|ZP_06206587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294504888|ref|YP_003568950.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|21759072|sp|Q8ZC65|CLPP_YERPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389537|sp|Q66DT4|CLPP_YERPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122980282|sp|Q1CL65|CLPP_YERPN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123072666|sp|Q1C4K8|CLPP_YERPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214723|sp|A4TPE3|CLPP_YERPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167008652|sp|A7FLC4|CLPP_YERP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21957773|gb|AAM84608.1|AE013706_3 ATP-dependent proteolytic subunit of clpA-clpP serine protease,
heat shock protein F21.5 [Yersinia pestis KIM 10]
gi|45435480|gb|AAS61039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis biovar Microtus str. 91001]
gi|51588591|emb|CAH20199.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Yersinia pseudotuberculosis IP
32953]
gi|108774746|gb|ABG17265.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Nepal516]
gi|108780556|gb|ABG14614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Antiqua]
gi|115348798|emb|CAL21752.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CO92]
gi|145211748|gb|ABP41155.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis Pestoides F]
gi|149291410|gb|EDM41484.1| ATP-dependent Clp protease proteolytic subunit ClpP [Yersinia
pestis CA88-4125]
gi|152962117|gb|ABS49578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis IP 31758]
gi|162352652|gb|ABX86600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis Angola]
gi|165916029|gb|EDR34636.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. IP275]
gi|165921541|gb|EDR38738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. F1991016]
gi|165989967|gb|EDR42268.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. E1979001]
gi|166205748|gb|EDR50228.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. B42003004]
gi|166960611|gb|EDR56632.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Orientalis str. MG05-1020]
gi|167051461|gb|EDR62869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Antiqua str. UG05-0454]
gi|167057633|gb|EDR67379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis biovar Mediaevalis str. K1973002]
gi|169751985|gb|ACA69503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis YPIII]
gi|186697352|gb|ACC87981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pseudotuberculosis PB1/+]
gi|229681256|gb|EEO77350.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Nepal516]
gi|229687731|gb|EEO79804.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. India
195]
gi|229695127|gb|EEO85174.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis biovar Orientalis str. PEXU2]
gi|229701008|gb|EEO89037.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Yersinia pestis Pestoides A]
gi|262362954|gb|ACY59675.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D106004]
gi|262366873|gb|ACY63430.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
D182038]
gi|270338017|gb|EFA48794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Yersinia
pestis KIM D27]
gi|294355347|gb|ADE65688.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
Z176003]
gi|320016343|gb|ADV99914.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
biovar Medievalis str. Harbin 35]
Length = 207
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 170/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAYHTGKSLEEI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SA ++ ++G+VD V R
Sbjct: 179 ERDTERDRFLSAEQSVEYGLVDSVFTRRD 207
>gi|320540337|ref|ZP_08039989.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
gi|320029657|gb|EFW11684.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Serratia symbiotica str. Tucson]
Length = 207
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 128/209 (61%), Positives = 169/209 (80%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQCAPNMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAE+P+K+I LYINSPGGV+TAGM+IYDTM+FIKP +ST CMGQA SMGS LL+
Sbjct: 59 AQMLFLEAESPEKDIFLYINSPGGVITAGMSIYDTMKFIKPDVSTICMGQACSMGSFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG K RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G++ ++
Sbjct: 119 AGAKSKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAEHTGQSLAQI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E +RD M+A EA ++G+VD +L R
Sbjct: 179 ECDTERDRFMTADEAVEYGLVDGILTHRS 207
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 192
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 147/192 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGERSYDIYSRLLK+RI+F+ I+D +A + AQLLFL A++P K+I
Sbjct: 1 MSLIPYVIEQTSRGERSYDIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYDTMQ IKP +ST C+G AASM ++LL+AG KG R+ALPN+ +
Sbjct: 61 QMYINSPGGSVSAGLAIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE HA+ I+K + RLN I + G+ E V + DRD+ MSA EA
Sbjct: 121 MIHQPLGGARGQASDIEIHARHILKTRERLNRILAERTGQPLERVAQDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D+V+
Sbjct: 181 KAYGLIDEVIYR 192
>gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
JMP134]
gi|124013825|sp|Q472D3|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia
eutropha JMP134]
Length = 216
Score = 243 bits (621), Expect = 9e-63, Method: Composition-based stats.
Identities = 119/194 (61%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AG+AIYDTMQF+KP + T CMG AASMG+ LL+AG KG R ALPN+RI
Sbjct: 83 SLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRI 142
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ ++ RLN I + G+ E++ + DRD+ MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQA 202
Query: 196 CDWGVVDKVLMSRI 209
D+G++DKV+ R
Sbjct: 203 VDYGLIDKVIARRS 216
>gi|260596809|ref|YP_003209380.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
gi|260215986|emb|CBA28638.1| ATP-dependent Clp protease proteolytic subunit [Cronobacter
turicensis z3032]
Length = 214
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 125/202 (61%), Positives = 167/202 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+ED MA LI AQ+LFLE
Sbjct: 13 ERDQFAPHMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLE 72
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGGV+TAGM+IYDTMQFI+P +ST CMGQAASMG+ LL+AG KG R
Sbjct: 73 AENPEKDIYLYINSPGGVITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKR 132
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G+ E++E+ +RD
Sbjct: 133 FCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIERDTERD 192
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SA EA ++G+VD ++ R
Sbjct: 193 RFLSAGEAVEYGLVDSIMTHRN 214
>gi|182417589|ref|ZP_02948911.1| Clp protease [Clostridium butyricum 5521]
gi|237667767|ref|ZP_04527751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
gi|182378544|gb|EDT76073.1| Clp protease [Clostridium butyricum 5521]
gi|237656115|gb|EEP53671.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
butyricum E4 str. BoNT E BL5262]
Length = 201
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 117/201 (58%), Positives = 157/201 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+ ++G++ D A LI AQLLFL++E+P K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDASAQLIVAQLLFLDSEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTMQ I +ST C+G AASMG+ LLS G KG R+ALPNA I
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMQLINADVSTICVGMAASMGAFLLSCGAKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQ +DIE HA ++K+K LN+ +N GK E +++ +RD+ MSA +A
Sbjct: 121 MIHQPLGGFQGQVTDIEIHANRMLKVKEVLNKTLSENTGKPLEVIQRDTERDNFMSAEDA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G+VD++++ + +EKS+
Sbjct: 181 KEYGLVDEIIVKKPKNKEKSE 201
>gi|77360986|ref|YP_340561.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis TAC125]
gi|110816463|sp|Q3IF46|CLPP_PSEHT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76875897|emb|CAI87118.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti)(Heat shock protein
F21.5) [Pseudoalteromonas haloplanktis TAC125]
Length = 205
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 125/197 (63%), Positives = 156/197 (79%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT +GERSYDIYSRLLKERI+F+TG +ED+MA LI AQ+LFLE+ENP
Sbjct: 7 DPLNALVPMVVEQTPKGERSYDIYSRLLKERIIFLTGPVEDNMANLILAQMLFLESENPD 66
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGMAIYDTM FIKP +ST C+GQAASMG+ LL+AG KG RF LPN
Sbjct: 67 KDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPN 126
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQASD E HA++I+ IK +LN + ++ G+ + + K DRD+ MSA
Sbjct: 127 SRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSA 186
Query: 193 SEACDWGVVDKVLMSRI 209
+A D+G+VD V +R
Sbjct: 187 DQAVDYGIVDSVFKNRA 203
>gi|171463607|ref|YP_001797720.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193145|gb|ACB44106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 209
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 121/209 (57%), Positives = 159/209 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M + ++ E LGLVPMV+E + RGER+YDIYSRLL+ER++F+ G++ D A L+
Sbjct: 1 MIYNHSQSENLEPKGLGLVPMVIETSGRGERAYDIYSRLLRERVIFLVGEVNDQTANLVI 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP KEISLYINSPGG V+AG+AIYDTMQFIKP +ST CMG AASMG+ LL
Sbjct: 61 AQLLFLESENPDKEISLYINSPGGAVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLC 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AGE G R+ALPN+R+++HQP GG GQASDIE A++I+ ++ RLN+I G++ E +
Sbjct: 121 AGENGKRYALPNSRVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD+ MSA +A D+G++DKV+ R
Sbjct: 181 AKDTDRDNFMSAEQARDYGLIDKVIEKRP 209
>gi|163793182|ref|ZP_02187158.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium BAL199]
gi|159181828|gb|EDP66340.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium BAL199]
Length = 213
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 129/210 (61%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ D+++ LVPMVVEQTNRGER+YDIYSRLLKERI+FV G I D +A+++CAQLLFL
Sbjct: 1 MANPVDIYMNSLVPMVVEQTNRGERAYDIYSRLLKERIIFVMGPINDAVASVVCAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP K+I++YINSPGG+VT+GMA+YDTM++++P IST CMG AASMGSLLL+AG G
Sbjct: 61 EAENPTKDIAMYINSPGGIVTSGMAMYDTMEYVRPEISTVCMGHAASMGSLLLTAGAPGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPNA++++HQPSGGF GQASDIE HA++I+K + RLN+IYVK+ G++ +E+EK +DR
Sbjct: 121 RYCLPNAKVMIHQPSGGFQGQASDIEIHAREIIKTRERLNQIYVKHSGRSIDEIEKGMDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A EA +G++D+V+ R E K
Sbjct: 181 DNFMTADEAKAFGLIDEVIHKRPAPVETDK 210
>gi|171059225|ref|YP_001791574.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
gi|226706459|sp|B1Y6H3|CLPP_LEPCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|170776670|gb|ACB34809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptothrix
cholodnii SP-6]
Length = 202
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 113/198 (57%), Positives = 156/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LG+VP+V+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP
Sbjct: 5 ETQNLGMVPIVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDQSANLVVAQLLFLESENP 64
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+IS YINSPGG V+AGM+IYDTMQFIKP +ST CMG AASMG+ LL+AG KG RF+LP
Sbjct: 65 DKDISFYINSPGGSVSAGMSIYDTMQFIKPQVSTLCMGLAASMGAFLLAAGAKGKRFSLP 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N++I++HQP GG GQA+DIE HA++I+K + +LN I + G++ E+++ +RD+ MS
Sbjct: 125 NSKIMIHQPLGGAQGQATDIEIHAREILKTREQLNRILAERTGQSLEKIQNDTERDYFMS 184
Query: 192 ASEACDWGVVDKVLMSRI 209
+ EA +G++D+V+ R
Sbjct: 185 SEEAQTYGLIDQVISKRP 202
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 243 bits (621), Expect = 1e-62, Method: Composition-based stats.
Identities = 120/195 (61%), Positives = 154/195 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+V+EQTNRGER+YDIYSRLLK+RIV ++G+I D +A+LI AQLLFLEAE+P K+
Sbjct: 1 MSALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG AIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+
Sbjct: 61 IYLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA+ I+KIK R+N+I + G+ E +E+ DRD M+A E
Sbjct: 121 IMIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKV+ R
Sbjct: 181 ALKYGIIDKVIERRP 195
>gi|260438109|ref|ZP_05791925.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
gi|292809590|gb|EFF68795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
Length = 194
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 115/194 (59%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A ++ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSANIVVAQLLFLEAEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM +IK +ST C+G AASMG+ LLS G KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGTKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ASD++ A I+K K++LNEI KN GK + +E+ DRD+ M+A EA
Sbjct: 121 MIHQPSGGSRGMASDMKIVADQILKTKQKLNEILAKNTGKPIDVIERDTDRDNYMTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D ++ +R
Sbjct: 181 LEYGLIDSIIENRK 194
>gi|261346364|ref|ZP_05974008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
gi|282565678|gb|EFB71213.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rustigianii DSM 4541]
Length = 206
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 128/193 (66%), Positives = 164/193 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 14 MALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 74 HLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV 133
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HAQ+I+K+K R+NE+ + GK+ EE+ + +RD +SA+EA
Sbjct: 134 MIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAHHTGKSIEEISRDTERDRFLSANEA 193
Query: 196 CDWGVVDKVLMSR 208
++G+VD + SR
Sbjct: 194 KEYGLVDHIYTSR 206
>gi|225389281|ref|ZP_03759005.1| hypothetical protein CLOSTASPAR_03027 [Clostridium asparagiforme
DSM 15981]
gi|225044660|gb|EEG54906.1| hypothetical protein CLOSTASPAR_03027 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLIVAQLLFLEAEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTM +IK +ST C+G AASMG+ LLS G KG RF+LPN++I
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGAKGKRFSLPNSQI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+K KR+LNEI N GK E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIKIVAENILKTKRKLNEILAANTGKPLEVIERDTERDYYMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+++ +
Sbjct: 181 REYGLIDQIITN 192
>gi|238759262|ref|ZP_04620429.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
gi|238702549|gb|EEP95099.1| ATP-dependent Clp protease proteolytic subunit [Yersinia aldovae
ATCC 35236]
Length = 194
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 128/194 (65%), Positives = 163/194 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+E+ +RD +SA +A
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAQQA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD V R
Sbjct: 181 VEYGLVDSVFTRRD 194
>gi|300856723|ref|YP_003781707.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
gi|300436838|gb|ADK16605.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
Length = 194
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 115/194 (59%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT+RGERSYDIYSRLLK+RIV ++ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTSRGERSYDIYSRLLKDRIVMLSEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IK +ST C+G ASMG+ LL+AG KG RFALPNA I
Sbjct: 61 YLYINSPGGSITSGMAIYDTMQYIKSDVSTICIGMGASMGAFLLTAGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+ IK++LN I + G+ E+VEK +RD+ M+A EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAKRILDIKKKLNTIISERTGQPLEKVEKDTERDNFMTAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ +
Sbjct: 181 KEYGLIDEVITKKK 194
>gi|260913095|ref|ZP_05919577.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
gi|260632682|gb|EEX50851.1| ATP-dependent Clp protease [Pasteurella dagmatis ATCC 43325]
Length = 193
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 160/193 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P+K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCVGQACSMGAFLLAGGTAGKRIALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E +E+ DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIERIERDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 KAYGLVDEVLVKR 193
>gi|238788008|ref|ZP_04631804.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
gi|238723956|gb|EEQ15600.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
frederiksenii ATCC 33641]
Length = 194
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 128/194 (65%), Positives = 163/194 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+E+ +RD +SA +A
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILKVKSRMNELMAHHTGKSLEEIERDTERDRFLSAEQA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD V R
Sbjct: 181 VEYGLVDSVFTRRD 194
>gi|257455804|ref|ZP_05621030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
gi|257446818|gb|EEV21835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
Length = 224
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 163/208 (78%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ +D LVPMVVEQ+ RGERS+DIYSRLL+ER+VF+ GQ+EDHMA LI AQL
Sbjct: 16 QNTVTRDVLSPQSALVPMVVEQSARGERSFDIYSRLLRERVVFLAGQVEDHMANLIVAQL 75
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEAENP+K+I LYINSPGG V+AG+A++DTM FI+P +ST CMG A SMGS LL+AGE
Sbjct: 76 LFLEAENPEKDIHLYINSPGGSVSAGLAVFDTMNFIQPQVSTICMGGAYSMGSFLLAAGE 135
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R+AL NAR+++HQPSGG GQA+DIE +A++I+KI+ RLN+I + G+ E++ +
Sbjct: 136 KGKRYALANARVMIHQPSGGAQGQATDIEINAREILKIRERLNKILAERTGQPLEKIARD 195
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDI 211
++RD+ + A EA ++G++D+VL R I
Sbjct: 196 VERDYWLDAQEAKEYGLIDEVLEKRPSI 223
>gi|251791978|ref|YP_003006698.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
aphrophilus NJ8700]
gi|247533365|gb|ACS96611.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter aphrophilus NJ8700]
Length = 193
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 156/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVV+QT+RGER+YDIYSRLLK+R++F++G++ED+MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVDQTSRGERAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R LP+AR+
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGAPGKRGVLPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKSTLNERLAFHTGQPIETIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD+V R
Sbjct: 181 QNYGLVDEVFTKR 193
>gi|307265821|ref|ZP_07547372.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter wiegelii Rt8.B1]
gi|306919216|gb|EFN49439.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter wiegelii Rt8.B1]
Length = 195
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 111/195 (56%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RIVF+ +I D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+ I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K++ +L++I +N G+ E+++ +RD M A +A
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+VL+ +
Sbjct: 181 KAYGIIDEVLVRKKK 195
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|312876447|ref|ZP_07736431.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|311796805|gb|EFR13150.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor lactoaceticus 6A]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
Length = 195
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 120/195 (61%), Positives = 154/195 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+V+EQTNRGER+YDIYSRLLK+RIV ++G+I D +A+LI AQLLFLEAE+P K+
Sbjct: 1 MSALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG AIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+
Sbjct: 61 IYLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA+ I+KIK R+N+I + G+ E +E+ DRD M+A E
Sbjct: 121 IMIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKV+ R
Sbjct: 181 ALKYGIIDKVIERRP 195
>gi|258544428|ref|ZP_05704662.1| endopeptidase Clp [Cardiobacterium hominis ATCC 15826]
gi|258520317|gb|EEV89176.1| endopeptidase Clp [Cardiobacterium hominis ATCC 15826]
Length = 206
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 118/196 (60%), Positives = 155/196 (79%), Gaps = 2/196 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMVVEQT RGERSYDIYSRLLKER++F+ G + D A L+ AQ+LFLEAENP ++I L
Sbjct: 8 LIPMVVEQTGRGERSYDIYSRLLKERVIFLVGPVNDASANLVVAQMLFLEAENPDQDIHL 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM++YDTM FIKP +ST C+GQAASMG++LL+AG KG RFALP++R+++
Sbjct: 68 YINSPGGSVTAGMSVYDTMNFIKPDVSTLCLGQAASMGAMLLTAGAKGKRFALPHSRVMI 127
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++K+K LNE+ K+ G+ E++E+ DRD+ MSA EA
Sbjct: 128 HQPLISGGLGGQASDIEIHARELLKMKATLNELLAKHSGQPLEKIERDTDRDNFMSAEEA 187
Query: 196 CDWGVVDKVLMSRIDI 211
+G++D V +R DI
Sbjct: 188 AAYGLIDHVTTARADI 203
>gi|317405213|gb|EFV85552.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans C54]
Length = 217
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 116/195 (59%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AGMAIYDTMQF+KP +ST C G AASMG+ LL+AG+KG RF LPN+RI
Sbjct: 82 SLYINSPGGSVYAGMAIYDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I N G++ + + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILDLRERLNRILADNTGQSIDRIALDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRID 210
+G+VDKV+ SR +
Sbjct: 202 VSYGLVDKVMTSRSE 216
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 118/195 (60%), Positives = 157/195 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
GLVP+VVEQTNRGER+YDIYSRLLK+RI+F+ G I+DH+A L+ AQ LFLEAE+P+K+
Sbjct: 1 MSGLVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS LL+AG G R+ALP AR
Sbjct: 61 IHLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA++I+++K LN+ + G+ E++ + +RD+ MSA E
Sbjct: 121 IMIHQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D+V+ R
Sbjct: 181 AKKYGLIDEVMPYRK 195
>gi|71083579|ref|YP_266298.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91762000|ref|ZP_01263965.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
gi|115311789|sp|Q4FM94|CLPP_PELUB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71062692|gb|AAZ21695.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1062]
gi|91717802|gb|EAS84452.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter ubique HTCC1002]
Length = 203
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 123/203 (60%), Positives = 169/203 (83%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ D LVPMVVEQ+N+GER+YDIYSRLLKERI+F+ G I D++A+L+ AQLLFL
Sbjct: 1 MTTNLLDQMNTLVPMVVEQSNKGERAYDIYSRLLKERIIFLVGPINDNVASLVTAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P+KEI+LYINSPGG+VTAG+ IYDTMQ+IKP +ST C+GQAASMGS LL+AG+KG
Sbjct: 61 ESEDPKKEINLYINSPGGLVTAGLGIYDTMQYIKPDVSTLCIGQAASMGSFLLAAGKKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPS GF GQA+DIE HA +++ +K+RLNEIY K+ GK+ ++V+K L+R
Sbjct: 121 RFSLPNSRIMVHQPSAGFQGQATDIEIHANEVLALKKRLNEIYSKHTGKSVDDVKKALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ M+ A ++G++D+V+ +R
Sbjct: 181 DNFMTPDTAKEFGLIDEVVENRS 203
>gi|92117752|ref|YP_577481.1| endopeptidase Clp [Nitrobacter hamburgensis X14]
gi|116243151|sp|Q1QL76|CLPP_NITHX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91800646|gb|ABE63021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrobacter
hamburgensis X14]
Length = 211
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 138/209 (66%), Positives = 176/209 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED+M+ L+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDNMSMLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
A+NP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP++T C GQAASMGSLLL+AGEK MR
Sbjct: 61 ADNPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 HALPNARIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++A A D+G+VDKV+ R + K
Sbjct: 181 KFLTADMARDFGLVDKVIDKRAEEPAAPK 209
>gi|332112672|gb|EGJ12465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
Length = 202
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 157/197 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LG+VPMV+EQ+ RGER+YDIYSRLL+ERIVF+ G + D +A L+CAQLLFLE+ENP
Sbjct: 5 ETTGLGMVPMVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQVANLVCAQLLFLESENP 64
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AG++I+DTM FIKP +ST CMG AASMGS LL AG KG RFALP
Sbjct: 65 DKDISLYINSPGGSVSAGLSIFDTMNFIKPEVSTLCMGMAASMGSFLLMAGAKGKRFALP 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQPSGG GQASDIE A++I+K + +LN IY + G++ E++ ++RD +S
Sbjct: 125 NSRVMIHQPSGGAQGQASDIEIQAREIIKTREQLNRIYAERTGQSIEKIAADMERDMWLS 184
Query: 192 ASEACDWGVVDKVLMSR 208
EA D+G++D+VL R
Sbjct: 185 PGEAKDYGLIDQVLEKR 201
>gi|146295915|ref|YP_001179686.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
gi|166201809|sp|A4XHW0|CLPP_CALS8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145409491|gb|ABP66495.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 195
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 118/195 (60%), Positives = 154/195 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+V+EQTNRGER+YDIYSRLLK+RIV ++G+I D +A+LI AQLLFLEAE+P K+
Sbjct: 1 MSALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG AIYDT+Q+IKP +ST C+G AASMG+ LL+AG KG RFALPN+
Sbjct: 61 IYLYINSPGGSVTAGFAIYDTIQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA+ I+KIK+R+N I + G+ E +E+ +RD M+A E
Sbjct: 121 IMIHQPIGGVRGQATDIKIHAEWILKIKQRINRILAERTGQPIEVIERDTERDFFMTAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKV+ R
Sbjct: 181 ALKYGIIDKVIERRP 195
>gi|330431763|gb|AEC16822.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
Length = 195
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 126/194 (64%), Positives = 157/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT RGER++DIYSRLLKER++F+ GQ+ED+MA LI AQLLFLEAENP ++I
Sbjct: 1 MALVPMVVEQTARGERAFDIYSRLLKERVIFLNGQVEDNMANLIVAQLLFLEAENPDEDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP + T CMGQA SMG+ LL+ G G RFALP+ARI
Sbjct: 61 NLYINSPGGVVTAGMAIYDTMQFIKPDVRTLCMGQACSMGAFLLAGGAAGKRFALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQASDI+ HAQ+I+KIK LN+ + G+ E VE+ DRD+ MSA A
Sbjct: 121 MIHQPLGGYRGQASDIQIHAQEILKIKDTLNQRLAFHTGQPLEVVERDTDRDNFMSAQAA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+VL R
Sbjct: 181 KEYGLIDEVLTHRQ 194
>gi|220934115|ref|YP_002513014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. HL-EbGR7]
gi|219995425|gb|ACL72027.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thioalkalivibrio sp. HL-EbGR7]
Length = 216
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 124/215 (57%), Positives = 167/215 (77%), Gaps = 1/215 (0%)
Query: 1 MSFEGCAKK-DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
MS +G + + L LVPMVVEQT RGER+YDIYSRLLKER++F G +ED+MA +I
Sbjct: 1 MSNQGIGDRGALDTRALNLVPMVVEQTARGERAYDIYSRLLKERVIFAVGPVEDYMANVI 60
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLLFLE+ENP K+ISLYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG++LL
Sbjct: 61 VAQLLFLESENPDKDISLYINSPGGAVTAGMAIYDTMQFIKPDVSTLCIGQAASMGAVLL 120
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
+ G KG RF LP++R+++HQP GGF GQA+DI+ HA++I+K++ LN I + G++ E+
Sbjct: 121 AGGAKGKRFCLPHSRVMIHQPLGGFQGQATDIDIHAREILKVRAELNRILAHHTGQSIEQ 180
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+E+ +RD ++ EA ++G++D+VL SR E+
Sbjct: 181 IEQDTERDRFLNPVEAAEYGLIDQVLSSREMAEQA 215
>gi|170744618|ref|YP_001773273.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
sp. 4-46]
gi|168198892|gb|ACA20839.1| Endopeptidase Clp [Methylobacterium sp. 4-46]
Length = 208
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 132/206 (64%), Positives = 173/206 (83%), Gaps = 1/206 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + + LVPMVVEQ++RGER++DIYSRLL+ERI+F+TG +ED+ A+LI AQLLFL
Sbjct: 1 MRDPVEFYNSALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYSASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+GQAASMGSLLL+AGE G
Sbjct: 61 EAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVATLCVGQAASMGSLLLAAGEPGH 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQA+DI HA++I +KRRLNEIYVK+ G+ Y+ +E+ L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDAIEQGLER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
D+ M+A A +WG++D+VL R +
Sbjct: 181 DNFMTADAAKEWGLIDEVLQKRAETP 206
>gi|114048055|ref|YP_738605.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-7]
gi|123326387|sp|Q0HTK7|CLPP_SHESR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113889497|gb|ABI43548.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-7]
Length = 202
Score = 243 bits (620), Expect = 1e-62, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERS+DIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DRD
Sbjct: 121 FCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A D+G+VD V+ R
Sbjct: 181 NFMSATQAVDYGLVDAVMTKR 201
>gi|294340353|emb|CAZ88734.1| ATP-dependent Clp protease proteolytic subunit precursor
(Endopeptidase Clp) (Caseinolytic protease) (Protease
Ti) (Heat shock protein F21.5) [Thiomonas sp. 3As]
Length = 202
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 118/194 (60%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMV+EQ+ RGER+YDIYSRLL+ER++F+ G I D MA L+ AQLLFLE+ENP K+I
Sbjct: 9 LGLVPMVIEQSGRGERAYDIYSRLLRERVIFLVGPINDQMANLVVAQLLFLESENPDKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AGMAI+DTMQFIKP +ST C G AASMG+ L++AG KG R++LPN+RI
Sbjct: 69 SLYINSPGGSVSAGMAIFDTMQFIKPDVSTLCTGIAASMGAFLMAAGAKGKRYSLPNSRI 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DIE A++I+ ++ RLN I + G+T E++ +RD MSA EA
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYLRERLNGILAERTGQTLEKIGIDTERDFFMSADEA 188
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+V+ R
Sbjct: 189 KDYGLIDEVISKRS 202
>gi|77165153|ref|YP_343678.1| endopeptidase Clp [Nitrosococcus oceani ATCC 19707]
gi|254434725|ref|ZP_05048233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
oceani AFC27]
gi|110816460|sp|Q3JAJ8|CLPP_NITOC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|76883467|gb|ABA58148.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
oceani ATCC 19707]
gi|207091058|gb|EDZ68329.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
oceani AFC27]
Length = 203
Score = 243 bits (620), Expect = 2e-62, Method: Composition-based stats.
Identities = 122/199 (61%), Positives = 158/199 (79%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT RGER+YDIYSRLLKER+VF+ G +EDHMA L+ AQLLFLE+ENP
Sbjct: 3 DSLNTLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPD 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAG++IYDTMQFIKP +ST C+GQAASMG++LL+ G G R LP+
Sbjct: 63 KDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTLCVGQAASMGAVLLAGGAGGKRHCLPH 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+L+HQP GGF GQA+DI+ HA++I+ ++ RLN I K+ G+ E+++ DRD+ MSA
Sbjct: 123 SRLLIHQPLGGFQGQATDIDIHAREILLVRERLNHILAKHTGQPIEKIQHDTDRDYFMSA 182
Query: 193 SEACDWGVVDKVLMSRIDI 211
+E+ +G+VD VL R +I
Sbjct: 183 TESLAYGLVDSVLKQRAEI 201
>gi|153814157|ref|ZP_01966825.1| hypothetical protein RUMTOR_00366 [Ruminococcus torques ATCC 27756]
gi|317499957|ref|ZP_07958193.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|331087820|ref|ZP_08336745.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
gi|145848553|gb|EDK25471.1| hypothetical protein RUMTOR_00366 [Ruminococcus torques ATCC 27756]
gi|316898674|gb|EFV20709.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|330409515|gb|EGG88956.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 3_1_46FAA]
Length = 193
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 152/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEA++P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G+KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGAFLLAGGKKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I++ K++LNEI N G++ E ++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKQKLNEILAANTGQSLETIKADTERDNFMSADEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D+V+
Sbjct: 181 KAYGLIDEVIAK 192
>gi|292493106|ref|YP_003528545.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosococcus
halophilus Nc4]
gi|291581701|gb|ADE16158.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosococcus
halophilus Nc4]
Length = 203
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 121/199 (60%), Positives = 159/199 (79%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT RGER+YDIYSRLLKER+VF+ G +EDHMA L+ AQLLFLE+ENP
Sbjct: 3 DSLNTLVPMVVEQTARGERAYDIYSRLLKERVVFLVGPVEDHMANLVVAQLLFLESENPD 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAG+++YDTMQFIKP IST C+GQAASMG++LL+ G +G R LP+
Sbjct: 63 KDIHLYINSPGGSVTAGLSVYDTMQFIKPDISTLCIGQAASMGAVLLAGGTQGKRHCLPH 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+L+HQP GGF GQA+DI+ HA++I+ ++ RLN I K+ G+ E++++ DRD+ MSA
Sbjct: 123 SRLLIHQPLGGFQGQAADIDIHAREIMLVRERLNHILAKHTGQPIEKIQRDTDRDYFMSA 182
Query: 193 SEACDWGVVDKVLMSRIDI 211
+E+ +G+VD VL R +
Sbjct: 183 NESVAYGLVDSVLQQRGET 201
>gi|114767020|ref|ZP_01445928.1| Protease subunit of ATP-dependent Clp protease [Pelagibaca
bermudensis HTCC2601]
gi|114540804|gb|EAU43868.1| Protease subunit of ATP-dependent Clp protease [Roseovarius sp.
HTCC2601]
Length = 210
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 131/209 (62%), Positives = 174/209 (83%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD + ++ LVPMVVEQT+RGER+YDI+SRLLKERI+FV+G + D M++LI AQLL L
Sbjct: 1 MKDPFETYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AGE GM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGEAGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPSGG+ GQA+DI HA++ +K+KRRLNEIYV++ G+T E VE L+R
Sbjct: 121 RFSLPNSRIMVHQPSGGYQGQATDIMIHAEETLKLKRRLNEIYVRHTGQTLENVEAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ M+ +A +WG++D+++ SR EE
Sbjct: 181 DNFMAPEDAKEWGLIDEIVESRGAAEEAK 209
>gi|300900508|ref|ZP_07118675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300924164|ref|ZP_07140156.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300937054|ref|ZP_07151920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300958005|ref|ZP_07170169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300988008|ref|ZP_07178488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300997374|ref|ZP_07181714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|301022569|ref|ZP_07186441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|301049644|ref|ZP_07196593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|301301588|ref|ZP_07207723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301647363|ref|ZP_07247175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|309787029|ref|ZP_07681641.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|312964538|ref|ZP_07778794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|312970533|ref|ZP_07784714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|300298581|gb|EFJ54966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 185-1]
gi|300304193|gb|EFJ58713.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 200-1]
gi|300315272|gb|EFJ65056.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 175-1]
gi|300355989|gb|EFJ71859.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 198-1]
gi|300397450|gb|EFJ80988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 69-1]
gi|300407560|gb|EFJ91098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 45-1]
gi|300419617|gb|EFK02928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 182-1]
gi|300457885|gb|EFK21378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 21-1]
gi|300843085|gb|EFK70845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 124-1]
gi|301074508|gb|EFK89314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 146-1]
gi|308924607|gb|EFP70102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 1617]
gi|310337182|gb|EFQ02320.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1827-70]
gi|312290772|gb|EFR18649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 2362-75]
gi|313646936|gb|EFS11393.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
flexneri 2a str. 2457T]
gi|315256265|gb|EFU36233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 85-1]
gi|315289845|gb|EFU49235.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 110-3]
gi|315294229|gb|EFU53580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 153-1]
gi|315299561|gb|EFU58809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 16-3]
gi|315616622|gb|EFU97239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 3431]
gi|323153474|gb|EFZ39728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli EPECa14]
gi|323160452|gb|EFZ46400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli E128010]
gi|323164238|gb|EFZ50045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
sonnei 53G]
gi|323170523|gb|EFZ56173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli LT-68]
gi|323178294|gb|EFZ63872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1180]
gi|323184732|gb|EFZ70103.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli 1357]
gi|323191357|gb|EFZ76620.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli RN587/1]
gi|324010068|gb|EGB79287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 57-2]
gi|324010651|gb|EGB79870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 60-1]
gi|324016702|gb|EGB85921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli MS 117-3]
gi|325498272|gb|EGC96131.1| ATP-dependent Clp protease proteolytic subunit [Escherichia
fergusonii ECD227]
gi|327254765|gb|EGE66381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Escherichia
coli STEC_7v]
gi|332085596|gb|EGI90760.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
dysenteriae 155-74]
gi|332094593|gb|EGI99639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 5216-82]
gi|332098592|gb|EGJ03558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shigella
boydii 3594-74]
Length = 194
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 165/194 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 YLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++E+ +RD +SA EA
Sbjct: 121 MIHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD +L R
Sbjct: 181 VEYGLVDSILTHRN 194
>gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 123/192 (64%), Positives = 159/192 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ I+D +A + AQLLFL A++P+K+I
Sbjct: 1 MNLVPIVVEQTNRGERSYDIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IKP +ST CMG AASMGSLLL+AG KG RFALPNA +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKPDVSTICMGMAASMGSLLLTAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ HA I+K K++LNEIYV+ G+ YE++++ DRD+ MSA +A
Sbjct: 121 MIHQPLGGVRGQASDIKIHADWILKTKQKLNEIYVERTGQPYEKIDRDTDRDNFMSAEDA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKV+ +
Sbjct: 181 LNYGLIDKVITT 192
>gi|212709197|ref|ZP_03317325.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
gi|212688109|gb|EEB47637.1| hypothetical protein PROVALCAL_00230 [Providencia alcalifaciens DSM
30120]
Length = 206
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 128/193 (66%), Positives = 165/193 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 14 MALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 73
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 74 QLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKRFCLPNSRV 133
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HAQ+I+K+K R+NE+ ++ GK+ EE+ + +RD +SA+EA
Sbjct: 134 MIHQPLGGYQGQATDIEIHAQEILKVKSRMNELMAQHTGKSIEEISRDTERDRFLSANEA 193
Query: 196 CDWGVVDKVLMSR 208
++G+VD + SR
Sbjct: 194 KEYGLVDHIYTSR 206
>gi|156935010|ref|YP_001438926.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
gi|156533264|gb|ABU78090.1| hypothetical protein ESA_02861 [Cronobacter sakazakii ATCC BAA-894]
Length = 194
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 164/194 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+ED MA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDQMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFI+P +ST CMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 YLYINSPGGVITAGMSIYDTMQFIQPDVSTICMGQAASMGAFLLTAGTKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HA++I+K+K R+NE+ ++ G+ E++E+ +RD +SA EA
Sbjct: 121 MIHQPLGGYQGQATDIEIHAREILKVKARMNELMAQHTGQPLEQIERDTERDRFLSAGEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G+VD ++ R
Sbjct: 181 VEYGLVDSIMTHRN 194
>gi|116243127|sp|Q0VQ90|CLPP_ALCBS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 205
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 129/199 (64%), Positives = 162/199 (81%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ LGLVP+V+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA LI AQ+LFLE+EN
Sbjct: 6 KDPTNLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESEN 65
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+AG G RFAL
Sbjct: 66 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFAL 125
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GGF GQASDIE HA++I+KIK +LN + + G+ E++EK DRD+ M
Sbjct: 126 PNARVMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFM 185
Query: 191 SASEACDWGVVDKVLMSRI 209
SA EA ++G++D VL R
Sbjct: 186 SADEAKEYGIIDAVLSQRP 204
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 154/208 (74%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
Q+LFLE+ENP K+I YINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL+A
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RFALPN+R+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS +A +G+VD+V R
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|77459919|ref|YP_349426.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens Pf0-1]
gi|92087005|sp|Q3K9W9|CLPP_PSEPF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77383922|gb|ABA75435.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens Pf0-1]
Length = 211
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG G RF LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G+T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAK 197
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 198 EYGLIDEVINQRP 210
>gi|117921102|ref|YP_870294.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
ANA-3]
gi|166214711|sp|A0KYL9|CLPP_SHESA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117613434|gb|ABK48888.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
ANA-3]
Length = 202
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERS+DIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DRD
Sbjct: 121 FCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLEVIERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A ++G+VD V+ R
Sbjct: 181 NFMSATQAVEYGLVDAVMTKR 201
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 118/194 (60%), Positives = 152/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT+RGERSYDI+SRLLKERI+F+ +I D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MALVPVVVEQTSRGERSYDIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTM +IKP +ST C+G AASMG+ LL+AG KG RFALPNA +
Sbjct: 61 QIYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DI HA+ IVK++ LN+I V+ G+ E V+K DRD M A EA
Sbjct: 121 MIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ SR
Sbjct: 181 KEYGIIDEVISSRK 194
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 154/208 (74%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
Q+LFLE+ENP K+I YINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL+A
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RFALPN+R+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS +A +G+VD+V R
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|332038369|gb|EGI74814.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
haloplanktis ANT/505]
Length = 205
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 127/198 (64%), Positives = 158/198 (79%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT +GERSYDIYSRLLKERI+F+TGQ+ED+MA LI AQ+LFLE+ENP
Sbjct: 7 DPLNALVPMVVEQTPKGERSYDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPD 66
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGMAIYDTM FIKP +ST C+GQAASMG+ LL+AG KG RF LPN
Sbjct: 67 KDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPN 126
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQASD E HA++I+ IK +LN + ++ G+ + + K DRD+ MSA
Sbjct: 127 SRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDIISKDTDRDNFMSA 186
Query: 193 SEACDWGVVDKVLMSRID 210
S+A D+G+VD V +R
Sbjct: 187 SQAVDYGLVDSVFTNRDK 204
>gi|308070425|ref|YP_003872030.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|310643606|ref|YP_003948364.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|305859704|gb|ADM71492.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|309248556|gb|ADO58123.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
Length = 211
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 121/199 (60%), Positives = 156/199 (78%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
K+ V + LVPMVVEQTNRGERSYDIYSRLLK+RI+F++G I+D +A L+ AQLLFL A
Sbjct: 9 KEKRLVVMSLVPMVVEQTNRGERSYDIYSRLLKDRIIFLSGPIDDDVANLVIAQLLFLSA 68
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+P+K+I+LYINSPGG VTAGM IYDTMQFIKP +ST C+G AASMGSLLL+AG G R+
Sbjct: 69 EDPEKDINLYINSPGGSVTAGMGIYDTMQFIKPDVSTICVGMAASMGSLLLTAGAPGKRY 128
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
AL N+ +++HQP GG GQASD+ HA I+K + +LN+IYV+ G+ E++E+ DRD
Sbjct: 129 ALTNSEVMIHQPLGGIQGQASDMLIHADWIIKTRAKLNQIYVERTGQPLEKIERDTDRDF 188
Query: 189 IMSASEACDWGVVDKVLMS 207
M A EA +G++D+VL
Sbjct: 189 FMEAEEAKAYGIIDQVLSK 207
>gi|91783520|ref|YP_558726.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
xenovorans LB400]
gi|187923896|ref|YP_001895538.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
phytofirmans PsJN]
gi|296157827|ref|ZP_06840661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
gi|116243110|sp|Q13Z15|CLPP2_BURXL RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|91687474|gb|ABE30674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
xenovorans LB400]
gi|187715090|gb|ACD16314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phytofirmans PsJN]
gi|295892073|gb|EFG71857.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
Length = 217
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 155/208 (74%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLTSQSSRDLEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
Q+LFLE+ENP K+IS YINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL+A
Sbjct: 70 QMLFLESENPDKDISFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RFALPN+R+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS +A +G+VD+V R
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
Length = 195
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 118/195 (60%), Positives = 156/195 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+VVEQTNRGER+YDIYSRLLK+RI+F+ G I+DH+A L+ AQ LFLEAE+P+K+
Sbjct: 1 MSALVPIVVEQTNRGERAYDIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS LL+AG KG R+ALP AR
Sbjct: 61 IHLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA++I++++ LNE + G+ E++ + +RD MSA E
Sbjct: 121 IMIHQPLGGVQGQATDIDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D+V+ R
Sbjct: 181 AKKYGIIDEVMPYRK 195
>gi|326391008|ref|ZP_08212557.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
gi|325992953|gb|EGD51396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus JW 200]
Length = 195
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 151/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RIVF+ +I D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+ I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K++ +L++I +N G+ E+++ +RD M A EA
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+VL+
Sbjct: 181 KAYGIIDEVLIRNKK 195
>gi|196230686|ref|ZP_03129547.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
gi|196225027|gb|EDY19536.1| Endopeptidase Clp [Chthoniobacter flavus Ellin428]
Length = 228
Score = 242 bits (619), Expect = 2e-62, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 153/201 (76%), Gaps = 2/201 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP VVEQT RGERSYDIYSRLLK+RI+F+ I+D +A I AQLLFL+ E+
Sbjct: 12 PQSNY--YVPYVVEQTGRGERSYDIYSRLLKDRIIFLGTAIDDGVANSIIAQLLFLQMED 69
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+K+I++YINSPGG VTAG+AIYDTMQF+ ++T+C+G AASMG++LL+AG KG R+AL
Sbjct: 70 GKKDINIYINSPGGSVTAGLAIYDTMQFLTCDVNTYCIGMAASMGAVLLAAGTKGKRYAL 129
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+ I++HQ SGG G ASD+ER + + K+K+RL I K+ GKT E+V+ DRD+ M
Sbjct: 130 PNSDIMIHQVSGGAQGTASDVERTVEFMFKLKKRLIHILAKHTGKTDEQVKTDSDRDYYM 189
Query: 191 SASEACDWGVVDKVLMSRIDI 211
SA EA +G+VD+V+ SR DI
Sbjct: 190 SADEAKAYGLVDEVVKSRKDI 210
>gi|291548434|emb|CBL21542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
sp. SR1/5]
Length = 193
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 150/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSANLIVAQLLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LLS+G KG R+ALPN+ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGMAASMGAFLLSSGAKGKRYALPNSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I K K++LNEI N G+ E VEK DRD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADQIAKTKKKLNEILSANTGQPLEIVEKDTDRDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V++ +
Sbjct: 181 KAYGLIDGVVIHK 193
>gi|331090536|ref|ZP_08339389.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405879|gb|EGG85407.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 193
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 155/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLL LEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASIIVAQLLHLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+IK +ST C+G AASMG+ LL+ G KG RFALPNA I
Sbjct: 61 QLYINSPGGSVSAGLAIYDTMQYIKCDVSTTCIGMAASMGAFLLAGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A+ I+K +++LNEI + GK++E++ +RD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILKTRQKLNEILAERTGKSFEQISADTERDNFMSAKEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DKV++SR
Sbjct: 181 EEYGLIDKVVVSR 193
>gi|210615408|ref|ZP_03290535.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
gi|210150257|gb|EEA81266.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
Length = 193
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLE E+P+K+I
Sbjct: 1 MSVIPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDASASVIIAQLLFLEGEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+IK +ST C+G AASMGS LLS G+KG R+ALPNA I
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIKCDVSTICIGMAASMGSFLLSGGKKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A+ I+K +++LN I +N G++ E+++ +RD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILKTRQKLNTILAENTGQSLEKIQADTERDNFMSAQEA 180
Query: 196 CDWGVVDKVLMS 207
++G+VD+V+ S
Sbjct: 181 KEYGLVDEVIAS 192
>gi|160936367|ref|ZP_02083736.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
gi|158440650|gb|EDP18388.1| hypothetical protein CLOBOL_01259 [Clostridium bolteae ATCC
BAA-613]
Length = 193
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 151/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG AIYDTM +IK +ST C+G AASMG+ LLS G KG RFALPNA I
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+K +++LNEI N GK E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNEILAANTGKPLEVIERDTERDNYMSALEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+++
Sbjct: 181 KEYGLIDEIIAH 192
>gi|88860444|ref|ZP_01135082.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
gi|88817642|gb|EAR27459.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
tunicata D2]
Length = 205
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 126/203 (62%), Positives = 157/203 (77%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVPMVVEQT +GERSYDIYSRLLKER++F+TGQ+EDHMA LI AQLLFL
Sbjct: 1 MFNSVTDPLNALVPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+K+I +YINSPGG VTAGMAIYDTM FIKP +ST CMGQAASMG+ LLS G KG
Sbjct: 61 ESENPEKDIFIYINSPGGSVTAGMAIYDTMNFIKPNVSTVCMGQAASMGAFLLSGGTKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF LPN+R+++HQP GGF GQASD E HA++I+ IK +LN + ++ G+ E + + DR
Sbjct: 121 RFCLPNSRVMIHQPLGGFQGQASDFEIHAREILSIKDKLNRLLAEHTGQPIEVISRDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ MS ++A ++G+VD VL R
Sbjct: 181 DNFMSGAQAVEYGIVDAVLTQRD 203
>gi|239623656|ref|ZP_04666687.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47_FAA]
gi|239521687|gb|EEQ61553.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47FAA]
Length = 193
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 108/192 (56%), Positives = 151/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG AIYDTM +IK +ST C+G AASMG+ LL+ G KG RFALPN+ I
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+K +++LN+I N G+ E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+++
Sbjct: 181 KEYGLIDEIIAH 192
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 154/195 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+V+EQTNRGER+YDIYSRLLK+RIV ++G+I D +A+LI AQLLFLEAE+P K+
Sbjct: 1 MSALVPIVIEQTNRGERAYDIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG AIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+
Sbjct: 61 IYLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA+ I+KIK R+N+I + G+ E +E+ DRD M+A E
Sbjct: 121 IMIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D+V+ R
Sbjct: 181 ALKYGIIDRVIERRP 195
>gi|254179427|ref|ZP_04886026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
gi|254200063|ref|ZP_04906429.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|147749659|gb|EDK56733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei FMH]
gi|184209967|gb|EDU07010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1655]
Length = 211
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 156/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 4 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 63
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL++
Sbjct: 64 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 123
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN + + G+ E +
Sbjct: 124 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 183
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 184 RDTDRDNFMSSEDAKAYGLIDHVSTKRP 211
>gi|268317954|ref|YP_003291673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodothermus
marinus DSM 4252]
gi|262335488|gb|ACY49285.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodothermus
marinus DSM 4252]
Length = 252
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 105/207 (50%), Positives = 153/207 (73%), Gaps = 4/207 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ G ++ LVP+V+EQT RGER+YDI+SRLLKERIV + I D +A L+ AQ
Sbjct: 24 YSGPFQQYPVG---ALVPIVIEQTTRGERAYDIFSRLLKERIVIIGTPINDQIANLVVAQ 80
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL+L +E+ +++I++YINSPGG + +G+A+YDTMQ++ PP++T C+G AASMG++LL+AG
Sbjct: 81 LLWLASEDSERDINIYINSPGGSIDSGLAVYDTMQYVAPPVATICVGLAASMGAVLLAAG 140
Query: 123 EKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
KG R ALPN+RI++HQP GQA+DIE HA++I+K++ RLNEI + G+ E +
Sbjct: 141 VKGKRAALPNSRIMIHQPWMSGVQGQATDIEIHAREILKMRERLNEILAYHTGQPKERIA 200
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSR 208
+ +DRD +SA EA ++G+VD VL R
Sbjct: 201 QDVDRDFWLSAQEAKEYGLVDNVLTPR 227
>gi|115634688|ref|XP_786892.2| PREDICTED: similar to LOC496087 protein [Strongylocentrotus
purpuratus]
Length = 239
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 161/200 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+V+EQT RGER+YDIYSRLLKERI+ + G + D +++++ AQLLFL++E+ +K I
Sbjct: 32 PLVPIVIEQTGRGERAYDIYSRLLKERIICLMGPVNDTVSSVVIAQLLFLQSESNKKPIH 91
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+ IYD+MQ++ PPI+T+C+GQA SMGSLLL+AG GMR +LPN+RI+
Sbjct: 92 MYINSPGGSVTAGLGIYDSMQYVLPPIATWCVGQACSMGSLLLTAGAPGMRHSLPNSRIM 151
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSG GQA+DI+ A++I+K+K+++N++YVK+ G+T + +E+ ++RDH MS EA
Sbjct: 152 VHQPSGQAVGQATDIQIQAEEIIKLKKQINKLYVKHTGQTLDVIEQAMERDHFMSPQEAL 211
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
+G++DKVL I E ++
Sbjct: 212 QFGLIDKVLDHPPHIGENNQ 231
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 154/208 (74%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLTSQSSRDLETQALGLVPIVVETSGRGERSYDIYSRLLKERIVFLVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
Q+LFLE+ENP K+I YINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL+A
Sbjct: 70 QMLFLESENPDKDIYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAA 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG RFALPN+R+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 130 GAKGKRFALPNSRVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS +A +G+VD+V R
Sbjct: 190 RDTDRDNFMSGDDAQAYGLVDQVAHKRP 217
>gi|46198558|ref|YP_004225.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB27]
gi|46196180|gb|AAS80598.1| ATP-dependent clp protease proteolytic subunit [Thermus
thermophilus HB27]
Length = 212
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 149/192 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQT RGER YDIYSRLLK+RI+F+ I+ +A ++ AQLLFL+A+NP +EI L
Sbjct: 20 VIPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKL 79
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQF++ P+ST +G AASM +++L+AGEKG R+ALP+A++++
Sbjct: 80 YINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMI 139
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G ASDI AQ+I+K K+ LNEI K+ G+ E+VEK DRD+ +SA EA +
Sbjct: 140 HQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALE 199
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 200 YGLIDQVVTREE 211
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
Length = 202
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 114/202 (56%), Positives = 156/202 (77%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K+ + + LVP V+EQT+RGER+YDIYSRLLK+RI+F+ ++ + A+L+ AQLLFL
Sbjct: 1 MKRKGQVRDMSLVPYVIEQTSRGERNYDIYSRLLKDRIIFLGEEVNETTASLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+I LYINSPGG+VTAG+AIYDTMQ+IK +ST C+G AASMG+ LL+ G KG
Sbjct: 61 ESEDPGKDIHLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNA I++HQPSGG GQA++I+ A++I+K K++LNEI N GK Y+ + +R
Sbjct: 121 RLALPNAEIMIHQPSGGAKGQATEIQIAAENILKTKKKLNEILAANTGKPYDVIAADTER 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
DH MSA EA ++G++D V+ SR
Sbjct: 181 DHYMSAQEAMEYGLIDNVITSR 202
>gi|118590047|ref|ZP_01547451.1| ATP-dependent Clp protease proteolytic subunit [Stappia aggregata
IAM 12614]
gi|118437544|gb|EAV44181.1| ATP-dependent Clp protease proteolytic subunit [Stappia aggregata
IAM 12614]
Length = 211
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 138/210 (65%), Positives = 181/210 (86%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQTNRGER++DIYSRLLKERI+F+TG +EDHMATL+ AQLL+L
Sbjct: 1 MKDPVDIYMNTLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPVEDHMATLVSAQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEI++YINSPGG+VT+G+AIYDTMQFI+P +ST C+GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPSKEIAIYINSPGGLVTSGLAIYDTMQFIRPAVSTLCIGQAASMGSLLLAAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPNAR+++HQPSGGF GQA+DI HAQ+I+ +KRRLN+IYVK+ G+T ++VE+ L+R
Sbjct: 121 RYILPNARVMVHQPSGGFRGQAADIMLHAQEILAMKRRLNDIYVKHTGRTLDQVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A +A ++G+VDKV+ R + +
Sbjct: 181 DNFMTAEKAKEFGIVDKVITDRNTLGGDEE 210
>gi|150016209|ref|YP_001308463.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
beijerinckii NCIMB 8052]
gi|149902674|gb|ABR33507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
beijerinckii NCIMB 8052]
Length = 199
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 117/199 (58%), Positives = 155/199 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+ ++G++ D A LI AQLLFLE+E+P K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSANLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAG AIYDTMQ+IK +ST C+G AASMG+ LLS+G KG RFALPNA +
Sbjct: 61 YIYINSPGGSITAGNAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGTKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+D E HA+ I+K+K LN I +N GK E ++ ++RD+ MSA EA
Sbjct: 121 MIHQPLGGFQGQATDFEIHAKRILKMKETLNRILSENTGKPLETIKADVERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+G+VD+V+ + ++K
Sbjct: 181 KAYGLVDEVITTHKIGKDK 199
>gi|85716433|ref|ZP_01047405.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
gi|85696790|gb|EAQ34676.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
Length = 212
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 139/209 (66%), Positives = 175/209 (83%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED M+ L+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDTMSMLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP++T C GQAASMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 HALPNARIMVHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQTYQAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++A A D+G+VDKV+ R + K
Sbjct: 181 KFLTADMARDFGIVDKVIDKRAEDPAAPK 209
>gi|294635324|ref|ZP_06713821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
gi|291091300|gb|EFE23861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Edwardsiella
tarda ATCC 23685]
Length = 194
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 130/194 (67%), Positives = 161/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+AG +G RF LPN+R+
Sbjct: 61 HLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+ IK R+N + K+ G+ E +E+ +RD MSA EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPLEVIERDTERDRFMSAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G+VD VL R
Sbjct: 181 VDYGLVDAVLTQRA 194
>gi|302874445|ref|YP_003843078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulovorans 743B]
gi|307690948|ref|ZP_07633394.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulovorans 743B]
gi|302577302|gb|ADL51314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulovorans 743B]
Length = 194
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 115/192 (59%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLK+RIVF+ ++ D A+++ AQLLFLE+E+P K+I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIVFLGEEVNDASASVVVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTM +IKP ++T C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGMAIYDTMNYIKPDVATICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+ +K++LN I + G+ E +EK +RD+ M+A +A
Sbjct: 121 MIHQPLGGFKGQATDIGIHAERILLMKKKLNSILSERTGQPLEVIEKDTERDNFMTADKA 180
Query: 196 CDWGVVDKVLMS 207
D+G++D+V+
Sbjct: 181 KDYGLIDEVIAK 192
>gi|53719039|ref|YP_108025.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121601387|ref|YP_993274.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
SAVP1]
gi|124386617|ref|YP_001029282.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10229]
gi|126440189|ref|YP_001059356.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 668]
gi|126450257|ref|YP_001080784.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
NCTC 10247]
gi|126451473|ref|YP_001066627.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1106a]
gi|134277993|ref|ZP_01764708.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|217421679|ref|ZP_03453183.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|226197408|ref|ZP_03792985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237812684|ref|YP_002897135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238562204|ref|ZP_00440781.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242317499|ref|ZP_04816515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|251766649|ref|ZP_02264557.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254178458|ref|ZP_04885113.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|254189184|ref|ZP_04895695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|254206398|ref|ZP_04912750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|254258354|ref|ZP_04949408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
gi|254297312|ref|ZP_04964765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|254358192|ref|ZP_04974465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|67460243|sp|Q63V41|CLPP_BURPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201803|sp|A3MKJ8|CLPP_BURM7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201804|sp|A2SBG3|CLPP_BURM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201805|sp|A1V4X1|CLPP_BURMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201806|sp|A3NWA6|CLPP_BURP0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201807|sp|A3NAI5|CLPP_BURP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52209453|emb|CAH35404.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei K96243]
gi|121230197|gb|ABM52715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei SAVP1]
gi|124294637|gb|ABN03906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10229]
gi|126219682|gb|ABN83188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 668]
gi|126225115|gb|ABN88655.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106a]
gi|126243127|gb|ABO06220.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei NCTC 10247]
gi|134251643|gb|EBA51722.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 305]
gi|147753841|gb|EDK60906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei JHU]
gi|148027319|gb|EDK85340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei 2002721280]
gi|157807201|gb|EDO84371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157936863|gb|EDO92533.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pasteur 52237]
gi|160699497|gb|EDP89467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 10399]
gi|217395421|gb|EEC35439.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 576]
gi|225930787|gb|EEH26797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei Pakistan 9]
gi|237504658|gb|ACQ96976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei MSHR346]
gi|238523066|gb|EEP86507.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei GB8 horse 4]
gi|242140738|gb|EES27140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1106b]
gi|243065058|gb|EES47244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei PRL-20]
gi|254217043|gb|EET06427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710a]
Length = 217
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 120/208 (57%), Positives = 156/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL++
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN + + G+ E +
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|304319808|ref|YP_003853451.1| Protease subunit of ATP-dependent Clp protease [Parvularcula
bermudensis HTCC2503]
gi|303298711|gb|ADM08310.1| Protease subunit of ATP-dependent Clp protease [Parvularcula
bermudensis HTCC2503]
Length = 210
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 132/203 (65%), Positives = 176/203 (86%), Gaps = 1/203 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D+++ LVPMV+EQT+RGERS+DIYSRLLKERI+F++GQ+ D ++TLI AQLLFL
Sbjct: 1 MRDPHDIYMNTLVPMVIEQTSRGERSFDIYSRLLKERIIFLSGQVHDQVSTLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EA+NP+K+I+ YINSPGG VTAG+A+YDTM++I+P IST C+G AASMGSLLL+AG+KGM
Sbjct: 61 EADNPKKDIAFYINSPGGSVTAGLAMYDTMRYIRPQISTMCVGLAASMGSLLLTAGDKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPS GF GQASDIERHA+DI++ K+RLNEIYV++ G+ YE +E+TLDR
Sbjct: 121 RFSLPNSRIMVHQPSAGFQGQASDIERHARDIIQTKKRLNEIYVEHTGQDYETIERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D M+ +A D+G++D+VL R
Sbjct: 181 DTFMTPEDALDFGLIDQVLEKRA 203
>gi|254428693|ref|ZP_05042400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
gi|196194862|gb|EDX89821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alcanivorax
sp. DG881]
Length = 244
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 129/199 (64%), Positives = 162/199 (81%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ LGLVP+V+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA LI AQ+LFLE+EN
Sbjct: 45 KDPTNLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESEN 104
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+AG G RFAL
Sbjct: 105 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCVGQAASMGAFLLTAGATGKRFAL 164
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GGF GQASDIE HA++I+KIK +LN + + G+ E++EK DRD+ M
Sbjct: 165 PNARVMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFM 224
Query: 191 SASEACDWGVVDKVLMSRI 209
SA EA ++G++D VL R
Sbjct: 225 SADEAKEYGIIDAVLSQRP 243
>gi|257138854|ref|ZP_05587116.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
Length = 217
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 156/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL++
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R+ALPNAR+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|152980689|ref|YP_001353221.1| protease subunit of ATP-dependent Clp proteases [Janthinobacterium
sp. Marseille]
gi|226706516|sp|A6SY74|CLPP_JANMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151280766|gb|ABR89176.1| protease subunit of ATP-dependent Clp proteases [Janthinobacterium
sp. Marseille]
Length = 210
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 126/195 (64%), Positives = 156/195 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LG+VPMV+EQ+ RGER+YDIYSRLLKERI+F+ G + D MA LI AQLLFLE+ENP K+
Sbjct: 16 MLGMVPMVIEQSGRGERAYDIYSRLLKERIIFLVGPVNDQMANLIVAQLLFLESENPDKD 75
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG V+AGMAIYDTMQFIKP +ST C G AASMG+ LL+AGEKG RF+LPN+R
Sbjct: 76 ISLYINSPGGSVSAGMAIYDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSR 135
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE A++I+ ++ RLN I + GK+ EE+ K DRD+ MSA
Sbjct: 136 IMIHQPLGGAQGQASDIEIQAREILYLRERLNAILAERTGKSVEEIAKDTDRDNFMSADA 195
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKVL +R
Sbjct: 196 AVTYGMIDKVLATRA 210
>gi|209694398|ref|YP_002262326.1| ATP-dependent Clp protease proteolytic subunit [Aliivibrio
salmonicida LFI1238]
gi|226706438|sp|B6EHK3|CLPP_ALISL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|208008349|emb|CAQ78503.1| ATP-dependent Clp protease proteolytic subunit [Aliivibrio
salmonicida LFI1238]
Length = 207
Score = 242 bits (618), Expect = 2e-62, Method: Composition-based stats.
Identities = 127/209 (60%), Positives = 162/209 (77%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ + LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--ENNAMPSIMDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK++LN + ++ G+ E +
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKKKLNTLLAEHTGQPLEVI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
EK DRD+ M+A +A +G+VD VL R
Sbjct: 179 EKDTDRDNFMAADDAVKYGLVDAVLNKRD 207
>gi|88705172|ref|ZP_01102884.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
gi|88700867|gb|EAQ97974.1| ATP-dependent Clp protease, proteolytic subunit [Congregibacter
litoralis KT71]
Length = 206
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 125/200 (62%), Positives = 158/200 (79%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
LGLVPMVVEQT+RGERSYDIYSRLLKER+VFV GQ+EDHMA LI AQLLFLE+E
Sbjct: 2 SPPVEALGLVPMVVEQTSRGERSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I LYINSPGG VTAG++IYDTMQFIKP IST C+GQAASMG+ LLS G KG R+
Sbjct: 62 NPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYC 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNAR ++HQPSGG GQA+DI+ A++I+ I+ RLN + ++ G+ E +E+ +RD
Sbjct: 122 LPNARTMIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRF 181
Query: 190 MSASEACDWGVVDKVLMSRI 209
M A ++ ++G+VD+V+ +R
Sbjct: 182 MDAEQSKEYGLVDEVVTARS 201
>gi|326502578|dbj|BAJ95352.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506866|dbj|BAJ91474.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 300
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVE T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K IS
Sbjct: 71 GLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPIADETASLVVAQLLFLESENPLKPIS 130
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG +G R ALPNAR++
Sbjct: 131 LYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAGARGERRALPNARVM 190
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD M EA
Sbjct: 191 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLFMDPEEAR 250
Query: 197 DWGVVDKVLMSRI 209
+WG++D+V+ +R
Sbjct: 251 EWGLIDEVIENRP 263
>gi|326492708|dbj|BAJ90210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 285
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVE T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K IS
Sbjct: 56 GLVPMVVETTSRGERAYDIFSRLLKERIVCIHGPIADETASLVVAQLLFLESENPLKPIS 115
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG +G R ALPNAR++
Sbjct: 116 LYINSPGGVVTAGLAIYDTMQYIRCPVNTICIGQAASMGSLLLAAGARGERRALPNARVM 175
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD M EA
Sbjct: 176 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLFMDPEEAR 235
Query: 197 DWGVVDKVLMSRI 209
+WG++D+V+ +R
Sbjct: 236 EWGLIDEVIENRP 248
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 242 bits (618), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 154/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGER+YDIYSRLLK+RI+F+ ++ + A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERNYDIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG+VTAG+AIYDTMQ+IK +ST C+G AASMG+ LL+ G KG R+ALPNA I
Sbjct: 61 HLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+K K+RLNEI N GK YE + +RD+ MSA EA
Sbjct: 121 MIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D V+ +R
Sbjct: 181 AEYGLIDSVITNR 193
>gi|83858431|ref|ZP_00951953.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis
alexandrii HTCC2633]
gi|83853254|gb|EAP91106.1| ATP-dependent Clp protease, proteolytic subunit [Oceanicaulis
alexandrii HTCC2633]
Length = 207
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 140/201 (69%), Positives = 171/201 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ +DV + LVPMVVEQ+ RGER+YDIYSRLLKERIVFVTG IEDHMA+L+ AQLLFLE
Sbjct: 1 MREPQDVMMNLVPMVVEQSARGERAYDIYSRLLKERIVFVTGPIEDHMASLMVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP KEI++YINSPGG V+AG+AIYDTMQ+I P++T C+G AASMGSLLL+AG+KGMR
Sbjct: 61 SENPNKEIAMYINSPGGSVSAGLAIYDTMQYISCPVATACVGMAASMGSLLLTAGDKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI+LHQPSGGF G +DIERH +DI+KIKRR+NEIYVK+ G+ E+VEKTLDRD
Sbjct: 121 FATPNARIMLHQPSGGFRGTTADIERHGEDILKIKRRMNEIYVKHTGQPLEKVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
M A EA ++G++D V R
Sbjct: 181 FYMDAMEAKEFGLIDHVYEKR 201
>gi|124266485|ref|YP_001020489.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
gi|189082491|sp|A2SFB5|CLPP_METPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124259260|gb|ABM94254.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
Length = 202
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 115/202 (56%), Positives = 155/202 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG+VP+V+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE
Sbjct: 1 MSALETQNLGMVPVVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+ISLYINSPGG V+AG++I+DTMQFIKP +ST CMG AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISLYINSPGGSVSAGLSIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+R+++HQPSGG GQA+DIE A++I+K++ LN I + G+ E++ +RD
Sbjct: 121 FALPNSRVMIHQPSGGAQGQATDIEIQAREILKLRESLNGILAERTGQPLEKIRADSERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA EA +G++DKV+ R
Sbjct: 181 YFMSAEEATGYGLIDKVIAQRA 202
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 115/198 (58%), Positives = 153/198 (77%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
S L+P V+EQT RGERSYDIYSRLLK+RI+F+ +I+DH++ L+ AQLLFLE+E+
Sbjct: 2 SHGTMSYLIPYVIEQTGRGERSYDIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESED 61
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K++ +YINSPGGVVTAG+AIYDTMQ++K P+ST C+GQAASM ++LLSAGEKG R L
Sbjct: 62 PDKDVFVYINSPGGVVTAGLAIYDTMQYVKCPVSTICVGQAASMAAVLLSAGEKGKRICL 121
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQP GG GQASDIE A++I+++K LN I + G+ + + K DRD M
Sbjct: 122 PHSRIMIHQPLGGAQGQASDIEIQAKEILRMKEILNSILSNHTGQPMDRIAKDTDRDFFM 181
Query: 191 SASEACDWGVVDKVLMSR 208
SA EA +G+VDKV+ R
Sbjct: 182 SAEEAMAYGIVDKVIDRR 199
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 112/198 (56%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQ+NRGER+YDIYSRLLK+RIVF+ G I+DH+A L+ AQLLFLE+E+P K+I
Sbjct: 1 MTFVPIVVEQSNRGERAYDIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTMQ+IKP +ST C+G AASM ++LL+AG G R+ALP AR+
Sbjct: 61 HLYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A++I++++ LN+I ++ GK E ++ +RD+ MS+ EA
Sbjct: 121 MIHQPLGGAQGQATDIQIQAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEA 180
Query: 196 CDWGVVDKVL---MSRID 210
++G++D V+ R D
Sbjct: 181 KEYGIIDAVVVRGEQRKD 198
>gi|259909254|ref|YP_002649610.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
gi|224964876|emb|CAX56398.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
Length = 207
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+K K+ +NE+ K+ G+T E +
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASE+ ++G+VD VL R
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVLSQRS 207
>gi|53723667|ref|YP_103112.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia mallei
ATCC 23344]
gi|76808778|ref|YP_333874.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 1710b]
gi|167719122|ref|ZP_02402358.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei DM98]
gi|167738116|ref|ZP_02410890.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 14]
gi|167815308|ref|ZP_02446988.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 91]
gi|167823710|ref|ZP_02455181.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 9]
gi|167845261|ref|ZP_02470769.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei B7210]
gi|167893805|ref|ZP_02481207.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 7894]
gi|167902257|ref|ZP_02489462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei NCTC 13177]
gi|167910496|ref|ZP_02497587.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei 112]
gi|167918525|ref|ZP_02505616.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
pseudomallei BCC215]
gi|67460238|sp|Q62JK7|CLPP_BURMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|92087004|sp|Q3JRC9|CLPP_BURP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52427090|gb|AAU47683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
mallei ATCC 23344]
gi|76578231|gb|ABA47706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 1710b]
Length = 207
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 120/209 (57%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+
Sbjct: 1 MASQAP--RDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL+
Sbjct: 59 AQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G KG R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN + + G+ E +
Sbjct: 119 SGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 179 ARDTDRDNFMSSEDAKAYGLIDHVSTKRP 207
>gi|197302444|ref|ZP_03167499.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC
29176]
gi|197298342|gb|EDY32887.1| hypothetical protein RUMLAC_01172 [Ruminococcus lactaris ATCC
29176]
Length = 193
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEA++P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LLS G KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A+ I++ ++ LN I N GK E ++ +RD+ MSA+EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILRTRKTLNSILAANTGKPLEVIQTDTERDNFMSAAEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+ S
Sbjct: 181 KEYGLIDEVIAS 192
>gi|283797647|ref|ZP_06346800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|291074652|gb|EFE12016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|295092868|emb|CBK78975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cf. saccharolyticum K10]
gi|295114657|emb|CBL35504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SM4/1]
Length = 193
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGERSYDI+SRLLKERIVF+ ++ D A+LI AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIESTSRGERSYDIFSRLLKERIVFLGEEVTDVSASLIVAQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM +IK +ST C+G AASMG+ LL+ G KG R ALPNA +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGAKGKRLALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I++ K++LNEI N G+ YE +E+ DRD+ M+A EA
Sbjct: 121 MIHQPSGGARGQATEIQIVAENILRTKKKLNEILAANTGQPYEVIERDTDRDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D+V+ R
Sbjct: 181 LKYGLIDRVIAGR 193
>gi|295094048|emb|CBK83139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coprococcus
sp. ART55/1]
Length = 193
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 149/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGER+YDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MALVPYVVEQTSRGERTYDIYSRLLKDRIIFLGDEVNDATASLVIAQLLFLESEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGM IYDTM++IK +ST C G AASMG+ LL+ G KG R+ALPN+ I
Sbjct: 61 SLYINSPGGSVTAGMGIYDTMRYIKCDVSTICCGMAASMGAFLLAGGTKGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K K +LN++ +N GK + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGTQGQATEIEIAARHILKTKEKLNKMLSENTGKPLDVIAADTDRDNWMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
C +G++D V+ +R
Sbjct: 181 CAYGLIDSVITNR 193
>gi|119713091|gb|ABL97160.1| ATP-dependent Clp protease proteolytic subunit [uncultured marine
bacterium EB0_49D07]
Length = 204
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 124/203 (61%), Positives = 170/203 (83%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + GLVPMVVEQT RGER++DIYSRLLKERI+F+TG I+D+++ L+ AQLLFLE+ENP
Sbjct: 2 ETINSGLVPMVVEQTPRGERAFDIYSRLLKERIIFLTGPIDDYISNLVVAQLLFLESENP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+IS+YINSPGGV+T+G+AIYDTMQFI P +ST C+GQAASMGSLLL+ G +G RFAL
Sbjct: 62 EKDISIYINSPGGVITSGLAIYDTMQFIAPEVSTLCIGQAASMGSLLLAGGAEGKRFALT 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQP GGFSGQASD E HA++++ +K+++NEI K+ GKT ++VE+ DRD+ ++
Sbjct: 122 NSRIMIHQPLGGFSGQASDFEIHAKEMLLVKQKVNEILSKHTGKTLKKVEQDTDRDNFLN 181
Query: 192 ASEACDWGVVDKVLMSRIDIEEK 214
A+EA +G++D++L R + K
Sbjct: 182 ATEAVTYGIIDEILEKRPETNGK 204
>gi|83718816|ref|YP_442643.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis E264]
gi|167581577|ref|ZP_02374451.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis TXDOH]
gi|167619693|ref|ZP_02388324.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis Bt4]
gi|167836265|ref|ZP_02463148.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
thailandensis MSMB43]
gi|110816456|sp|Q2SWQ6|CLPP_BURTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83652641|gb|ABC36704.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
thailandensis E264]
Length = 207
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 121/209 (57%), Positives = 157/209 (75%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+
Sbjct: 1 MASQAP--RDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL+
Sbjct: 59 AQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G KG R+ALPNAR+++HQP GG GQASDIE A++I+ +K RLN + + G+ E +
Sbjct: 119 SGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQDVERI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 179 ARDTDRDNFMSSEDAKAYGLIDHVSTKRP 207
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 122/200 (61%), Positives = 162/200 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D ++V LVP+V+EQT RGER+YDIYSRLL++RIV + I+DH+A LI AQLLFLE++
Sbjct: 2 DIKEVTNQLVPIVIEQTPRGERAYDIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQ 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P K+I LYINSPGG VTAGMA+YDTMQ+IKP + T C+GQAASMG++LL+AG KG R+A
Sbjct: 62 DPDKDIYLYINSPGGSVTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LP++RI++HQP GG GQA+DI HA++I +IKR LNEI K+ G+ E++EK ++RD+
Sbjct: 122 LPHSRIMIHQPLGGIQGQATDIIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYF 181
Query: 190 MSASEACDWGVVDKVLMSRI 209
MSA EA D+GV+DKV+ R
Sbjct: 182 MSAEEAKDYGVIDKVIEKRQ 201
>gi|154482729|ref|ZP_02025177.1| hypothetical protein EUBVEN_00406 [Eubacterium ventriosum ATCC
27560]
gi|149736324|gb|EDM52210.1| hypothetical protein EUBVEN_00406 [Eubacterium ventriosum ATCC
27560]
Length = 193
Score = 242 bits (617), Expect = 3e-62, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 152/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ +RGERSYDIYSRLLK+RI+F+ +I D +A+ + AQLLFLE+E+P K+I
Sbjct: 1 MALVPYVIEQNSRGERSYDIYSRLLKDRIIFLGEEINDAVASTVVAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAGMAIYDTM ++K +ST C+G AASMG+ LLS+G KG R+ALPNA +
Sbjct: 61 HMYINSPGGSVTAGMAIYDTMNYVKCDVSTTCIGMAASMGAFLLSSGAKGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A+ I+K K++LN+I N GK EEVEK DRD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILKTKKKLNQILADNAGKPVEEVEKDTDRDNWLSADEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D+V+ R
Sbjct: 181 KEYGLIDEVIKDR 193
>gi|116793577|gb|ABK26796.1| unknown [Picea sitchensis]
Length = 248
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 121/209 (57%), Positives = 162/209 (77%), Gaps = 1/209 (0%)
Query: 2 SFEGCAKKDSEDVFL-GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
S + GL+PMV+E T+RGER+YDI+SRLLKERI+ + G I D A+++
Sbjct: 20 SLGTPSMNQFNPRRSYGLIPMVIEHTSRGERAYDIFSRLLKERIICINGPIADETASVVV 79
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENPQK I++YINSPGGVVTAG+AIYDTMQ+IK P++T C+GQAASMGSLLL+
Sbjct: 80 AQLLFLESENPQKPINMYINSPGGVVTAGLAIYDTMQYIKSPVTTLCIGQAASMGSLLLA 139
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G R ALPNAR+++HQPSGG SGQASDI HA++I+K + RLN +Y K+ G+T E++
Sbjct: 140 AGSHGERRALPNARVMIHQPSGGASGQASDIAIHAKEILKTRERLNGLYAKHTGQTIEKI 199
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ ++RD MS EA ++G++D+V+ R
Sbjct: 200 EQFMERDTFMSPDEAKEFGLIDEVIEHRP 228
>gi|110816466|sp|Q2NV79|CLPP_SODGM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 241 bits (616), Expect = 3e-62, Method: Composition-based stats.
Identities = 131/194 (67%), Positives = 165/194 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ++FLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFMTGQVEDHMANLIVAQMMFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +STFCMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 YLYINSPGGVITAGMSIYDTMQFIKPDVSTFCMGQAASMGAFLLAAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ G+ E +E+ +RD +SA EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKARMNELMAKHTGQPLEVIERDTERDRFLSAPEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G+VD VL R
Sbjct: 181 VDYGLVDSVLSQRT 194
>gi|254476195|ref|ZP_05089581.1| Clp protease [Ruegeria sp. R11]
gi|214030438|gb|EEB71273.1| Clp protease [Ruegeria sp. R11]
Length = 202
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 167/201 (83%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEPGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGGF GQA+DI HA++ +K+K+RLNEIYVK+ G+ Y+ + L+RD+ MS E
Sbjct: 121 VMVHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQDYDSIVNALERDNFMSPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++D+++ +R ++
Sbjct: 181 AKEFGLIDEIVENRSKLDSDD 201
>gi|238791431|ref|ZP_04635069.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
gi|238729047|gb|EEQ20563.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
Length = 194
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 129/194 (66%), Positives = 161/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK EE+E+ +RD +SA EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKPLEEIERDTERDRFLSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V R
Sbjct: 181 VGYGLVDSVFTRRD 194
>gi|254514393|ref|ZP_05126454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
gi|219676636|gb|EED33001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR5-3]
Length = 213
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 125/199 (62%), Positives = 158/199 (79%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
LGLVPMVVEQT+RGERSYDIYSRLLKER+VFV GQ+EDHMA LI AQLLFLE+EN
Sbjct: 10 PSVQSLGLVPMVVEQTSRGERSYDIYSRLLKERVVFVVGQVEDHMANLIVAQLLFLESEN 69
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAG++IYDTMQFIKP IST C+GQAASMG+ LLS G KG R+ L
Sbjct: 70 PDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDISTMCLGQAASMGAFLLSGGTKGKRYCL 129
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR ++HQPSGG GQA+DI+ A++I+ I+ RLN + ++ G+ E +E+ +RD M
Sbjct: 130 PNARTMIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFM 189
Query: 191 SASEACDWGVVDKVLMSRI 209
A ++ ++G+VD+V+ +R
Sbjct: 190 DAEQSKEYGLVDEVVTARS 208
>gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 201
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 157/201 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D+++ I AQLLFLEAENP+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG +TAGMAIYDTMQ+I+P +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 TLYINSPGGSITAGMAIYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I + G+ E + K DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILSERTGQPLEVIAKDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++D+++ + E+K K
Sbjct: 181 LEYGLIDQIISRNVLEEKKDK 201
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 147/193 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RI+F+ Q++D +A LI AQ+L+LE+E+P+K+I L
Sbjct: 1 MIPTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AGMAIYDTMQ I+P +ST C+G AASMG+ LL+ G KG R ALP+ARI++
Sbjct: 61 YINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A+DIE A++I+ IK LN + + G+ E +E+ DRD+ M+ +A +
Sbjct: 121 HQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKE 180
Query: 198 WGVVDKVLMSRID 210
+G++D+V+ R
Sbjct: 181 YGLIDQVITRRPQ 193
>gi|125975222|ref|YP_001039132.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|256003116|ref|ZP_05428108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281419196|ref|ZP_06250212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|166201818|sp|A3DJ10|CLPP_CLOTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125715447|gb|ABN53939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992807|gb|EEU02897.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 2360]
gi|281407062|gb|EFB37324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum JW20]
gi|316939386|gb|ADU73420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
thermocellum DSM 1313]
Length = 194
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ +I D A+L+ AQ+LFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIYSRLLKDRIIVLSDEINDVTASLVVAQMLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDTMQ++KP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 QLYINSPGGSVTAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+KIK +LN I + G+ +E++E+ +RD MSA EA
Sbjct: 121 MIHQPLGGARGQATDIKIHAEQIIKIKNKLNRILSERTGQPFEKIERDTERDFFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD+V+ R
Sbjct: 181 KAYGIVDEVMERRK 194
>gi|163815266|ref|ZP_02206643.1| hypothetical protein COPEUT_01426 [Coprococcus eutactus ATCC 27759]
gi|158449461|gb|EDP26456.1| hypothetical protein COPEUT_01426 [Coprococcus eutactus ATCC 27759]
Length = 193
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 149/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGER++DIYSRLLK+RI+F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MALVPYVVEQTSRGERTFDIYSRLLKDRIIFLGDEVNDATASLVIAQLLFLESEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGM IYDTM++IK +ST C G AASMG+ LL+ G KG R+ALPN+ I
Sbjct: 61 SLYINSPGGSVTAGMGIYDTMRYIKCDVSTICCGMAASMGAFLLAGGAKGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K K +LN++ +N GK + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGTQGQATEIEIAARHILKTKEKLNKMLAENTGKPLDVIAADTDRDNWMTADEA 180
Query: 196 CDWGVVDKVLMSR 208
C +G++D V+ +R
Sbjct: 181 CAYGLIDSVITNR 193
>gi|251772219|gb|EES52789.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Leptospirillum ferrodiazotrophum]
Length = 201
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 124/200 (62%), Positives = 165/200 (82%), Gaps = 1/200 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMVVEQTNRGER+YDIYSRLL++RI+ + I+D +A L+ AQ+LFLE+E+ K+I+L
Sbjct: 2 LIPMVVEQTNRGERAYDIYSRLLRDRIIILGTPIDDTVANLVIAQMLFLESEDSSKDINL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG+VTAG+AIYDT++FIKP +ST C+GQAASMG+ LLSAG KG R+ALPNARI++
Sbjct: 62 YINSPGGIVTAGLAIYDTIKFIKPDVSTICIGQAASMGAFLLSAGAKGKRYALPNARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DIE HA++I+K+K LN + ++CG+ E+V + DRD+ MSA EA D
Sbjct: 122 HQPMGGFQGQATDIEIHAREILKLKADLNRMMSEHCGQPVEKVAQDTDRDYFMSAKEAKD 181
Query: 198 WGVVDKVLMS-RIDIEEKSK 216
+G++D V+ S RID E+ SK
Sbjct: 182 YGLIDSVITSHRIDTEKTSK 201
>gi|118594831|ref|ZP_01552178.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
gi|118440609|gb|EAV47236.1| Peptidase S14, ClpP [Methylophilales bacterium HTCC2181]
Length = 209
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 127/197 (64%), Positives = 164/197 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMVVEQ+ RGERSYDIYSRLLKER+VF+ G ++D A ++ AQLLFLEAENP K+I
Sbjct: 13 LGYIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANVVVAQLLFLEAENPDKDI 72
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTMQFIKP IST C+GQAASMG+LLL+AG RF+LPN+R+
Sbjct: 73 SLYINSPGGSVTAGMAIYDTMQFIKPDISTLCIGQAASMGALLLTAGAAKKRFSLPNSRV 132
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ +K +LN+I ++ G++ E+V K DRD+ MSA +A
Sbjct: 133 MIHQPLGGFQGQASDIEIHAKEILYLKEKLNKIMAEHSGQSLEKVSKDTDRDNFMSAKDA 192
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++DKV+ SR D++
Sbjct: 193 MEYGLIDKVISSRSDVK 209
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
subsp. cytotoxis NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 107/193 (55%), Positives = 154/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I + G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQPLEVIERDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D++ +R
Sbjct: 181 LEYGLIDRIFTNR 193
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMVVEQ+NRGER+YDIYSRLLK+RI+F+ + D +A I AQ+LFL AE+P+K+I
Sbjct: 1 MSFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAI+DTMQFIKP +ST C+G AASMG+ LL+AG KG R+ LPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A+ I+K++ +LN I + G+ E +EK DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMTADEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+VL +
Sbjct: 181 KEYGLIDQVLEN 192
>gi|134094958|ref|YP_001100033.1| ATP-dependent Clp protease proteolytic subunit [Herminiimonas
arsenicoxydans]
gi|133738861|emb|CAL61908.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Herminiimonas arsenicoxydans]
Length = 209
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 124/195 (63%), Positives = 157/195 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LG+VPMV+EQ+ RGER+YDIYSRLLKER++F+ G + DH A LI AQLLFLE+ENP K+
Sbjct: 15 MLGMVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPVNDHAANLIVAQLLFLESENPDKD 74
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG V+AGMAI+DTMQFIKP +ST C G AASMG+ LL+AGEKG RF+LPN+R
Sbjct: 75 ISLYINSPGGSVSAGMAIFDTMQFIKPNVSTLCTGLAASMGAFLLAAGEKGKRFSLPNSR 134
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE A++I+ ++ RLN+I GKT EE+ + DRD+ MSA
Sbjct: 135 IMIHQPLGGAQGQASDIEIQAREILYLRERLNQILADRTGKTLEEISRDTDRDNFMSADA 194
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++DKVL +R
Sbjct: 195 AVEYGMIDKVLTTRA 209
>gi|294670412|ref|ZP_06735294.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307876|gb|EFE49119.1| hypothetical protein NEIELOOT_02131 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 211
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 114/206 (55%), Positives = 158/206 (76%), Gaps = 2/206 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E L+P V+EQ+ RGER++DIYSRLLKERI+F+ G + DH A L+ AQ+LFLE+EN
Sbjct: 3 PEITNNTLIPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVTDHTANLVVAQMLFLESEN 62
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I YI+SPGG VTAGM+++DTM FIKP +ST C+GQAASMG+ LLSAG KG RFAL
Sbjct: 63 PDKDIFFYIDSPGGSVTAGMSVFDTMNFIKPDVSTLCLGQAASMGAFLLSAGAKGKRFAL 122
Query: 131 PNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PN+RI++HQP GQASDIE HA++++K+K++LNE+ K+ G+ E+VE+ DRD+
Sbjct: 123 PNSRIMIHQPLISGGLGGQASDIEIHARELIKLKQKLNELLAKHTGQPLEKVERDTDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEK 214
MS+ A ++G++D+V+ +R D +
Sbjct: 183 FMSSEAAKEYGLIDEVIATRADAFKA 208
>gi|253999170|ref|YP_003051233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
sp. SIP3-4]
gi|313201272|ref|YP_004039930.1| ATP-dependent clp protease, proteolytic subunit clpp [Methylovorus
sp. MP688]
gi|253985849|gb|ACT50706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
sp. SIP3-4]
gi|312440588|gb|ADQ84694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylovorus
sp. MP688]
Length = 208
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 122/205 (59%), Positives = 160/205 (78%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ E LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLF
Sbjct: 2 SMQSQWEPQGLGYIPMVIEQSGRGERAYDIYSRLLRERVIFLVGPVNDMTANLVVAQLLF 61
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LEAENP K+ISLYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+LLL+AG K
Sbjct: 62 LEAENPDKDISLYINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKD 121
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF LPN+R+++HQP GGF GQASDIE HA++I+ ++ +LN I + G+ + +E+ D
Sbjct: 122 KRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLREKLNLILASHTGQPVDVIERDTD 181
Query: 186 RDHIMSASEACDWGVVDKVLMSRID 210
RD+ MSA ++ ++G+VDKV+ SR D
Sbjct: 182 RDNFMSAQQSVNYGLVDKVIASRTD 206
>gi|260575566|ref|ZP_05843564.1| Endopeptidase Clp [Rhodobacter sp. SW2]
gi|259022209|gb|EEW25507.1| Endopeptidase Clp [Rhodobacter sp. SW2]
Length = 210
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 133/210 (63%), Positives = 172/210 (81%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D ++ LVPMVVEQT+RGER+YDI+SR+LKERI+F++G + D M+ LICAQLLFL
Sbjct: 1 MRDPIDHYMNTLVPMVVEQTSRGERAYDIFSRMLKERIIFLSGPVHDGMSALICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP IST +GQAASMGSLLL+AG+KGM
Sbjct: 61 EAENPTKEISMYINSPGGVVTSGLSIYDTMQYIKPRISTLVIGQAASMGSLLLTAGQKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGG+ GQA+DI HAQ+ K+K RLN IYVK+ G+ E V L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGYQGQATDIMIHAQETQKLKDRLNGIYVKHTGQPMEAVVAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ MSA +A WG++D+++ SR EE K
Sbjct: 181 DNFMSAEDAKSWGLIDEIVESRGKAEETPK 210
>gi|110834071|ref|YP_692930.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
borkumensis SK2]
gi|110647182|emb|CAL16658.1| ATP-dependent Clp protease, proteolytic subunitClpP [Alcanivorax
borkumensis SK2]
Length = 218
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 129/199 (64%), Positives = 162/199 (81%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ LGLVP+V+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA LI AQ+LFLE+EN
Sbjct: 19 KDPTNLGLVPVVIEQTARGERSFDIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESEN 78
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+AG G RFAL
Sbjct: 79 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGAFLLTAGAAGKRFAL 138
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GGF GQASDIE HA++I+KIK +LN + + G+ E++EK DRD+ M
Sbjct: 139 PNARVMIHQPLGGFQGQASDIEIHAKEILKIKGQLNSLLAHHTGQPIEQLEKDTDRDNFM 198
Query: 191 SASEACDWGVVDKVLMSRI 209
SA EA ++G++D VL R
Sbjct: 199 SADEAKEYGIIDAVLSQRP 217
>gi|113970830|ref|YP_734623.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-4]
gi|123029527|sp|Q0HHA1|CLPP_SHESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113885514|gb|ABI39566.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-4]
Length = 202
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 162/201 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D+ LVPMV+EQT +GERS+DIYSRLLKERI+F+ GQ+E+HMA LI AQLLFLE
Sbjct: 1 MHNASDIQSALVPMVIEQTAKGERSFDIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P K+I LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+ GEKG R
Sbjct: 61 SESPDKDIFLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDI HAQ+I+ IK +LN + ++ G+ E +E+ DRD
Sbjct: 121 FCLPNSRVMIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLELIERDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MSA++A ++G+VD V+ R
Sbjct: 181 NFMSATQAVEYGLVDAVMTKR 201
>gi|90423893|ref|YP_532263.1| endopeptidase Clp [Rhodopseudomonas palustris BisB18]
gi|116243159|sp|Q215J2|CLPP_RHOPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90105907|gb|ABD87944.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Rhodopseudomonas palustris BisB18]
Length = 210
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 137/205 (66%), Positives = 173/205 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED M+TL AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGPVEDGMSTLTVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP+ST C GQAASMGSLLL+AG MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVSTLCTGQAASMGSLLLAAGHPDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+RI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 FSLPNSRIMVHQPSGGFQGQATDIMLHAQEILNLKKRLNEIYVKHTGQTYKAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
++A A D+G+VDKV+ R +
Sbjct: 181 KFLTADMARDFGIVDKVIDKRSEEP 205
>gi|254504144|ref|ZP_05116295.1| Clp protease [Labrenzia alexandrii DFL-11]
gi|222440215|gb|EEE46894.1| Clp protease [Labrenzia alexandrii DFL-11]
Length = 213
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 136/210 (64%), Positives = 181/210 (86%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQTNRGER++DIYSRLLKERI+F+TG +EDHMATL+ AQLL+L
Sbjct: 1 MKDPVDIYMNTLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPVEDHMATLVSAQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EA+NP KEI++YINSPGG+VT+G+AIYDTMQFI+P +ST C+GQAASMGSLLL+AGEK M
Sbjct: 61 EADNPSKEIAIYINSPGGLVTSGLAIYDTMQFIRPSVSTLCIGQAASMGSLLLAAGEKDM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF LPNAR+++HQPSGGF GQA+DI HAQ+I+ +KRRLNEIYVK+ G++ ++VE+ L+R
Sbjct: 121 RFILPNARVMVHQPSGGFRGQAADIMLHAQEILAMKRRLNEIYVKHTGRSLDQVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A +A ++G+VD V+ R + +++
Sbjct: 181 DNFMTAEKAKEFGIVDSVITDRTSLGGENE 210
>gi|197284027|ref|YP_002149899.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|226329068|ref|ZP_03804586.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198]
gi|227358102|ref|ZP_03842444.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
gi|226706465|sp|B4EU53|CLPP_PROMH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|194681514|emb|CAR40393.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
HI4320]
gi|225202254|gb|EEG84608.1| hypothetical protein PROPEN_02971 [Proteus penneri ATCC 35198]
gi|227161837|gb|EEI46869.1| ATP-dependent Clp protease proteolytic subunit [Proteus mirabilis
ATCC 29906]
Length = 207
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 167/201 (83%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
++ + LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEA
Sbjct: 7 QEQFAPNMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEA 66
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP+K+I+LYINSPGGV+TAGM+IYDTMQ+IK +ST CMGQA SMG+ LLSAG KG R
Sbjct: 67 ENPEKDINLYINSPGGVITAGMSIYDTMQYIKADVSTICMGQACSMGAFLLSAGAKGKRI 126
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LPN+R+++HQP GG+ GQA+DI+ HAQ+I+K+K R+NE+ ++ GK+ EE+E+ +RD
Sbjct: 127 CLPNSRVMIHQPLGGYQGQATDIQIHAQEILKVKSRMNELMAQHTGKSIEEIERDTERDR 186
Query: 189 IMSASEACDWGVVDKVLMSRI 209
+SA+EA ++G+VDKV R
Sbjct: 187 FLSANEALEYGLVDKVYTQRS 207
>gi|320450477|ref|YP_004202573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
scotoductus SA-01]
gi|320150646|gb|ADW22024.1| ATP-dependent Clp protease, proteolytic, subunit ClpP [Thermus
scotoductus SA-01]
Length = 212
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 149/192 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQT RGER YDIYSRLLK+RI+F+ I+ +A +I AQLLFL+A+NP +EI L
Sbjct: 20 VIPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDSQVANIIVAQLLFLDAQNPNQEIRL 79
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQF++ P+ST +G AASM +++L+AGEKG R+ALP++++++
Sbjct: 80 YINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMI 139
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G ASDI AQ+I+K K+ LNEI K+ G+ E+VEK DRD+ +SA EA +
Sbjct: 140 HQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALE 199
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 200 YGLIDQVVTREE 211
>gi|325577258|ref|ZP_08147742.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
gi|325160840|gb|EGC72961.1| ATP-dependent Clp protease, protease subunit [Haemophilus
parainfluenzae ATCC 33392]
Length = 193
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 159/193 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P+K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIERIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD VL+ R
Sbjct: 181 KAYGLVDDVLIKR 193
>gi|302817596|ref|XP_002990473.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
gi|300141641|gb|EFJ08350.1| hypothetical protein SELMODRAFT_131898 [Selaginella moellendorffii]
Length = 253
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 119/209 (56%), Positives = 164/209 (78%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A + GL+PMV+E T RGER+YDI+SRLLKERIV + G I D A+L+ A
Sbjct: 13 ALSPPALDHHQRRLYGLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVA 72
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+LE+ENP K I LYINSPGGVVTAG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+A
Sbjct: 73 QLLYLESENPLKPIHLYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAA 132
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
GE G R +LPNAR+++HQPSGG SGQASDI A++I+ ++ RLN++Y K+ G + E+++
Sbjct: 133 GEPGQRRSLPNARVMVHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKID 192
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRID 210
++++RDH MS EA ++G++D+V++ R +
Sbjct: 193 QSMERDHFMSPEEAKEFGLIDEVIVQRPE 221
>gi|284006421|emb|CBA71657.1| ATP-dependent Clp protease proteolytic subunit [Arsenophonus
nasoniae]
Length = 209
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 167/209 (79%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ +D + LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA L+
Sbjct: 3 MSYHN--NQDQLAPHMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLVV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 61 AQMLFLEAENPDKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDIE HA++I+KIK R+NE+ K+ GK +EV
Sbjct: 121 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIEIHAKEILKIKSRMNELMAKHTGKKIKEV 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E +RD ++A EA +G+VDK+ +R
Sbjct: 181 ENDTERDRFLTAEEAVSYGLVDKIYTNRN 209
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 111/192 (57%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMVVEQ+NRGER+YDIYSRLLK+RI+F+ Q+ D +A I AQ+LFL+AE+P K+I
Sbjct: 1 MSYIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQFIK +ST C+G AASMG+ LL+AG G R+ALPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A+ I+K++ +LN I + G+ E +EK DRD+ MSA+EA
Sbjct: 121 MIHQPLGGAEGQATDIEIRARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMSAAEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 181 KEYGLIDQVIEK 192
>gi|116243156|sp|Q21Y67|CLPP_RHOFD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 202
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 155/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LG+VPMV+EQ+ RGERSYDIYSRLLKER++F+ G + D++A L+ AQLLFLE++NP
Sbjct: 5 QTQALGMVPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDYVANLVVAQLLFLESDNP 64
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+IS YINSPGG V+AGMAI+DTM F+KP +ST C G AASMG+ LL+AG KG RF+LP
Sbjct: 65 DKDISFYINSPGGSVSAGMAIFDTMNFVKPDVSTLCTGMAASMGAFLLAAGAKGKRFSLP 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+++++HQPSGG GQA++IE A++I+K + +LN+I + G+ +E+ +RD+ MS
Sbjct: 125 NSKVMIHQPSGGSQGQATEIEIQAREILKTREQLNKILAERTGQPLARIERDTERDYYMS 184
Query: 192 ASEACDWGVVDKVLMSRI 209
A E ++G++D+V+ R
Sbjct: 185 ADECKEYGLIDQVISKRA 202
>gi|213521159|gb|ACJ50516.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens]
Length = 211
Score = 241 bits (616), Expect = 4e-62, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG +G RF LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G+T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAK 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 198 EYGLIDAVIDKRP 210
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 241 bits (615), Expect = 4e-62, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 147/193 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RI+F+ Q++D +A LI AQ+L+LE+E+P+K+I L
Sbjct: 1 MIPTVIEQSARGERAFDIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AGMAIYDTMQ I+P +ST C+G AASMG+ LL+ G KG R ALP+ARI++
Sbjct: 61 YINSPGGSVYAGMAIYDTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A+DIE A++I+ IK LN + + G+ E +E+ DRD+ M+ +A +
Sbjct: 121 HQPLGGAQGPATDIEIQAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKE 180
Query: 198 WGVVDKVLMSRID 210
+G++D+V+ R
Sbjct: 181 YGLIDQVISKRPQ 193
>gi|282883083|ref|ZP_06291683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300813694|ref|ZP_07094016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
gi|281297060|gb|EFA89556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
lacrimalis 315-B]
gi|300512236|gb|EFK39414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 836 str. F0141]
Length = 194
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 119/194 (61%), Positives = 158/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLK+RI+F +G++ D MA LI AQLLFLE+E+P K+I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKDRIIFASGEVNDTMADLIVAQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+IKP +ST C+G AASMG++LLS+G KG RFALPN+ I
Sbjct: 61 QLYINSPGGSVSAGLAIYDTMQYIKPDVSTICIGMAASMGAILLSSGAKGKRFALPNSDI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G A+DI+ A+ I+K ++ LN+I KN G+ E++E+ DRD + A+EA
Sbjct: 121 MIHQPSGGTQGMATDIQITAEKILKTRKSLNQILAKNTGQKLEKIERDADRDFWLDANEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKV+ +R
Sbjct: 181 KEYGLIDKVIENRE 194
>gi|255284021|ref|ZP_05348576.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bryantella
formatexigens DSM 14469]
gi|255265474|gb|EET58679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bryantella
formatexigens DSM 14469]
Length = 194
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 113/194 (58%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A LI AQLLFLE+E+P K+I
Sbjct: 1 MSFVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSANLIVAQLLFLESEDPAKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG AIYDTMQ+IK +ST CMG AASMG+ LL+ G KG RFALPNA+I
Sbjct: 61 QLYINSPGGSVSAGWAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGAKGKRFALPNAQI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+K ++RLNE N G+ + +E +RD+ M+A EA
Sbjct: 121 MIHQPSGGAKGQASDIKIVAEEILKSRKRLNEYLAANTGQPIDVIEADTERDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D V+ +R
Sbjct: 181 KAYGLIDAVIANRQ 194
>gi|114327971|ref|YP_745128.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
gi|114316145|gb|ABI62205.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Granulibacter bethesdensis CGDNIH1]
Length = 248
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 134/216 (62%), Positives = 172/216 (79%), Gaps = 3/216 (1%)
Query: 4 EGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+D +V+ LVPMVVEQT RGERS+DIYSRLLKERI+F+TG + D ++ LICAQ
Sbjct: 32 RNMRDRDPVEVYSNTLVPMVVEQTARGERSFDIYSRLLKERIIFLTGAVYDQVSALICAQ 91
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+ENPQKEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL AG
Sbjct: 92 LLFLESENPQKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAG 151
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
EK RFALPNAR+++HQPSGG GQA+DIE A++I+ +++RLNEIY ++ G++ E +E+
Sbjct: 152 EKDKRFALPNARVMVHQPSGGAQGQATDIEIQAREILTLRKRLNEIYNRHTGQSIEAIER 211
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI--DIEEKSK 216
L+RD MSA EA D+G+VD+V+ R + SK
Sbjct: 212 KLERDTYMSAEEARDFGLVDQVVERRPVSSTPDSSK 247
>gi|121602655|ref|YP_988860.1| ATP-dependent Clp protease proteolytic subunit [Bartonella
bacilliformis KC583]
gi|166201800|sp|A1USA7|CLPP_BARBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120614832|gb|ABM45433.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bartonella
bacilliformis KC583]
Length = 210
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 149/209 (71%), Positives = 178/209 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMVVEQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSDLVKTALSLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDSMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PPIST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPISTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQASDIERHAQDI+++KR LNEIYV++ G+ YE +E TLDRD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQASDIERHAQDIIRMKRHLNEIYVQHTGQDYEIIENTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
H M+A EA +G++D V+ R + +++ K
Sbjct: 181 HFMTAEEAKMFGLIDDVIQYRAETKKEEK 209
>gi|170693532|ref|ZP_02884691.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|170141687|gb|EDT09856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
Length = 219
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 117/210 (55%), Positives = 154/210 (73%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLF
Sbjct: 1 MQSSYPPVTGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL AG++G
Sbjct: 61 LESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLCAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+DI+ A++++ ++ RLN + + G++ EEV + D
Sbjct: 121 KRYALPNARIMIHQPSGGSQGTAADIDIQAKEVLYLRERLNAMMAERTGRSIEEVARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
RD+ MSAS A +G+VD+VL +R + S
Sbjct: 181 RDNFMSASAAKTYGLVDEVLETRAALNSSS 210
>gi|161501794|ref|YP_767292.2| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 209
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 160/207 (77%), Positives = 186/207 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
H M A EA WGV+DKVL SR+++E +
Sbjct: 181 HFMDADEAQSWGVIDKVLTSRLEMEGE 207
>gi|89896100|ref|YP_519587.1| hypothetical protein DSY3354 [Desulfitobacterium hafniense Y51]
gi|219670517|ref|YP_002460952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
gi|116243113|sp|Q24S49|CLPP2_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89335548|dbj|BAE85143.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219540777|gb|ACL22516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfitobacterium hafniense DCB-2]
Length = 202
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 113/202 (55%), Positives = 152/202 (75%), Gaps = 3/202 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMV+EQTNRGERSYDIYSRLLK+RI+F+ G + D +A L+ AQ+LFLEAE+P+K+
Sbjct: 1 MSYLVPMVIEQTNRGERSYDIYSRLLKDRIIFLGGPVTDDVANLVVAQMLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG ++AGMAIYDTMQ+I+ + T C+G AASMG+ LL+AG KG R ALPNA
Sbjct: 61 IFLYINSPGGSISAGMAIYDTMQYIRADVHTICVGLAASMGAFLLTAGAKGKRQALPNAE 120
Query: 135 ILLHQPSG---GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
IL+HQP G SGQA++IE HA+ ++++K R+N I + G+T E +E DRD M+
Sbjct: 121 ILIHQPLIGGGGISGQATEIEIHAKHLLRVKERMNRILAERTGQTIERIEADTDRDRYMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A EA ++G++D+VL ++
Sbjct: 181 AEEAKEYGLIDEVLEKPNQPKK 202
>gi|187477999|ref|YP_786023.1| ATP-dependent Clp protease proteolytic subunit [Bordetella avium
197N]
gi|115422585|emb|CAJ49110.1| ATP-dependent Clp protease proteolytic subunit [Bordetella avium
197N]
Length = 217
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 117/196 (59%), Positives = 153/196 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMVVEQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVVEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG V AGMAI+DTMQF+KP +ST C G AASMG+ LL+AG+KG RF+LPN+RI
Sbjct: 82 SFYINSPGGSVYAGMAIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I +N G++ E + +RD MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAKEILDLRERLNRILAENTGQSMERIAIDTERDTFMSAEDA 201
Query: 196 CDWGVVDKVLMSRIDI 211
+G+VDKVL R D+
Sbjct: 202 LSYGLVDKVLARREDV 217
>gi|188534634|ref|YP_001908431.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029676|emb|CAO97555.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 207
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+K K+ +NE+ K+ G+T E +
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASE+ ++G+VD VL R
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVLAQRN 207
>gi|114152202|sp|Q2L256|CLPP_BORA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 201
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 117/196 (59%), Positives = 153/196 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMVVEQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 6 LGYIPMVVEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG V AGMAI+DTMQF+KP +ST C G AASMG+ LL+AG+KG RF+LPN+RI
Sbjct: 66 SFYINSPGGSVYAGMAIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFSLPNSRI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I +N G++ E + +RD MSA +A
Sbjct: 126 MIHQPSGGAQGQASDIQIQAKEILDLRERLNRILAENTGQSMERIAIDTERDTFMSAEDA 185
Query: 196 CDWGVVDKVLMSRIDI 211
+G+VDKVL R D+
Sbjct: 186 LSYGLVDKVLARREDV 201
>gi|82703457|ref|YP_413023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosospira
multiformis ATCC 25196]
gi|110816459|sp|Q2Y6J0|CLPP_NITMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|82411522|gb|ABB75631.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosospira
multiformis ATCC 25196]
Length = 213
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 119/203 (58%), Positives = 161/203 (79%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+++ E LGL+PMV+E + RGER+YDIYSRLL+ER++F+ G + + A LI AQLLFLE
Sbjct: 8 QRNHEPQDLGLIPMVIETSGRGERAYDIYSRLLRERVIFLVGPVTEASANLIVAQLLFLE 67
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+EN K+I YINSPGG+V+AGMA+YDTMQFIKP +ST C+GQAASMGSLLL+AG KG R
Sbjct: 68 SENADKDIHFYINSPGGLVSAGMAVYDTMQFIKPDVSTLCIGQAASMGSLLLAAGAKGKR 127
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDIE HA++I+ +K RLNE+ K+ G++ E +E+ DRD
Sbjct: 128 FCLPNSRVMIHQPLGGFQGQASDIEIHAREILYLKNRLNELLSKHTGQSMETIERDTDRD 187
Query: 188 HIMSASEACDWGVVDKVLMSRID 210
+ + A ++ +G+VD VL SR +
Sbjct: 188 NFLGAEDSVKYGLVDAVLTSRGE 210
>gi|319650519|ref|ZP_08004659.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
gi|317397700|gb|EFV78398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
Length = 201
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 154/201 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFLEAENP+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP + T C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVQTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ E + + DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNTILSERTGQPLEVIARDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G+VD+++ E+K K
Sbjct: 181 LEYGLVDQIITRNSLDEKKDK 201
>gi|188590743|ref|YP_001921998.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E3 str. Alaska E43]
gi|251778109|ref|ZP_04821029.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
gi|226706443|sp|B2UX13|CLPP_CLOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188501024|gb|ACD54160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E3 str. Alaska E43]
gi|243082424|gb|EES48314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum E1 str. 'BoNT E Beluga']
Length = 199
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 118/199 (59%), Positives = 157/199 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+ ++G++ D + LI +QLLFLE+E+P K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LLS+G KG R+ALPNA I
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLSSGAKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI+ HA I+KIK LN+I +N + E +E ++RD+ M+A EA
Sbjct: 121 MIHQPLGGFQGQATDIQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+G+VDKV+ ++K
Sbjct: 181 KAYGLVDKVITKNGTGKDK 199
>gi|297583414|ref|YP_003699194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
gi|297141871|gb|ADH98628.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
selenitireducens MLS10]
Length = 197
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 113/197 (57%), Positives = 155/197 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL A++P K+I
Sbjct: 1 MNLVPTVIEQTNRGERAYDIYSRLLKDRIIMLGTPIDDNVANSIVAQLLFLAADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP + T C+G AASMG+ LL+AGE G R+ALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQFIKPKVQTICIGMAASMGAFLLTAGEPGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE HA+ IV++K +LN+I + G+ E++ K DRD+ +SA++A
Sbjct: 121 MIHQPLGGAQGQASDIEIHAKRIVEMKEKLNQILAERTGQDIEQIRKDTDRDNFLSAAQA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+V+ D +
Sbjct: 181 KEYGLIDEVMDKTPDTK 197
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 117/190 (61%), Positives = 157/190 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+D++A L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTM++IK P+ST C+GQAASMG+ LLS GEKG RF+L N+RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HA++I+++K +LNE+ ++ G+++E+V +RD+ MS EA
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAKS 181
Query: 198 WGVVDKVLMS 207
+G++D ++
Sbjct: 182 YGIIDAIVTR 191
>gi|237747781|ref|ZP_04578261.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
gi|229379143|gb|EEO29234.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacter
formigenes OXCC13]
Length = 207
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 126/197 (63%), Positives = 159/197 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LG++PMV+EQ+ RGER+YDIYSRLLKERIVF+ G + D A LI AQLLFLE+ENP
Sbjct: 10 DTRMLGMIPMVIEQSGRGERAYDIYSRLLKERIVFLVGPVMDQNANLIVAQLLFLESENP 69
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST C G AASMG+ LL+AGEKG RF+LP
Sbjct: 70 DKDISLYINSPGGSVSAGMAIYDTMQFIKPQVSTLCTGLAASMGAFLLAAGEKGKRFSLP 129
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGG GQA+DIE HA++I+ ++ RLN I N GK+ E+V + +RD+ MS
Sbjct: 130 NSRIMIHQPSGGAQGQATDIEIHAREILYLRERLNGILADNTGKSIEQVARDTERDNFMS 189
Query: 192 ASEACDWGVVDKVLMSR 208
A+EA D+G++D VL R
Sbjct: 190 ANEAKDYGLIDDVLSKR 206
>gi|3318853|pdb|1TYF|A Chain A, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318854|pdb|1TYF|B Chain B, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318855|pdb|1TYF|C Chain C, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318856|pdb|1TYF|D Chain D, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318857|pdb|1TYF|E Chain E, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318858|pdb|1TYF|F Chain F, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318859|pdb|1TYF|G Chain G, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318860|pdb|1TYF|H Chain H, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318861|pdb|1TYF|I Chain I, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318862|pdb|1TYF|J Chain J, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318863|pdb|1TYF|K Chain K, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318864|pdb|1TYF|L Chain L, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318865|pdb|1TYF|M Chain M, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|3318866|pdb|1TYF|N Chain N, The Structure Of Clpp At 2.3 Angstrom Resolution Suggests
A Model For Atp-Dependent Proteolysis
gi|93278456|pdb|1YG6|A Chain A, Clpp
gi|93278457|pdb|1YG6|B Chain B, Clpp
gi|93278458|pdb|1YG6|C Chain C, Clpp
gi|93278459|pdb|1YG6|D Chain D, Clpp
gi|93278460|pdb|1YG6|E Chain E, Clpp
gi|93278461|pdb|1YG6|F Chain F, Clpp
gi|93278462|pdb|1YG6|G Chain G, Clpp
gi|93278463|pdb|1YG6|H Chain H, Clpp
gi|93278464|pdb|1YG6|I Chain I, Clpp
gi|93278465|pdb|1YG6|J Chain J, Clpp
gi|93278466|pdb|1YG6|K Chain K, Clpp
gi|93278467|pdb|1YG6|L Chain L, Clpp
gi|93278468|pdb|1YG6|M Chain M, Clpp
gi|93278469|pdb|1YG6|N Chain N, Clpp
gi|109157730|pdb|2FZS|A Chain A, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157731|pdb|2FZS|B Chain B, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157732|pdb|2FZS|C Chain C, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157733|pdb|2FZS|D Chain D, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157734|pdb|2FZS|E Chain E, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157735|pdb|2FZS|F Chain F, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157736|pdb|2FZS|G Chain G, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157737|pdb|2FZS|H Chain H, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157738|pdb|2FZS|I Chain I, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157739|pdb|2FZS|J Chain J, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157740|pdb|2FZS|K Chain K, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157741|pdb|2FZS|L Chain L, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157742|pdb|2FZS|M Chain M, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
gi|109157743|pdb|2FZS|N Chain N, Crystal Structure Of E. Coli Clpp With A Peptide
Chloromethyl Ketone Covalently Bound At The Active Site
Length = 193
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 164/193 (84%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 60
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R++
Sbjct: 61 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++E+ +RD +SA EA
Sbjct: 121 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 180
Query: 197 DWGVVDKVLMSRI 209
++G+VD +L R
Sbjct: 181 EYGLVDSILTHRN 193
>gi|254469734|ref|ZP_05083139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudovibrio
sp. JE062]
gi|211961569|gb|EEA96764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudovibrio
sp. JE062]
Length = 211
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 140/205 (68%), Positives = 176/205 (85%), Gaps = 1/205 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + F LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG +ED MATL+C+QLL+L
Sbjct: 1 MTDPVEYFTNSLVPMVVEQTNRGERAYDIFSRLLKERIIFLTGPVEDTMATLVCSQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEI+LYINSPGGVVT+G+AIYDTMQFI+P IST C+GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPNKEIALYINSPGGVVTSGLAIYDTMQFIRPKISTLCIGQAASMGSLLLAAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGGF GQA+DI HAQ+I+K+KRRLNEIYV + G+T E VE+ L+R
Sbjct: 121 RFSLPNSRVMVHQPSGGFRGQAADIMLHAQEILKLKRRLNEIYVSHTGQTLEAVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDI 211
D+ MSA A ++G++D V+ +R +
Sbjct: 181 DNFMSADAAKEFGLIDNVIENRESL 205
>gi|70731346|ref|YP_261087.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens Pf-5]
gi|110816462|sp|Q4K9J6|CLPP_PSEF5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68345645|gb|AAY93251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Pf-5]
Length = 211
Score = 241 bits (615), Expect = 5e-62, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG G RF LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAPGKRFCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G+T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAR 197
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 198 EYGLIDEVINQRP 210
>gi|254197976|ref|ZP_04904398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169654717|gb|EDS87410.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
Length = 217
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 119/208 (57%), Positives = 156/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLASQAPRDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL++
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLAS 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G +G R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN + + G+ E +
Sbjct: 130 GARGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRDRLNHLLAHHTGQDVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 190 RDTDRDNFMSSEDAKAYGLIDHVSTKRP 217
>gi|224824981|ref|ZP_03698087.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lutiella
nitroferrum 2002]
gi|224602652|gb|EEG08829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lutiella
nitroferrum 2002]
Length = 207
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 161/201 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LGLVPMVVEQ+ RGER+YDIYSRLLKERIVF+ G + D A L+ AQ+LFLE+ENP
Sbjct: 6 DTQALGLVPMVVEQSGRGERAYDIYSRLLKERIVFLVGPVTDESANLVVAQMLFLESENP 65
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I YINSPGG V+AGM+I+DTM FIKP +ST C+GQAASMG+ LLSAG KG RFALP
Sbjct: 66 DKDIYFYINSPGGSVSAGMSIFDTMNFIKPDVSTLCIGQAASMGAFLLSAGAKGKRFALP 125
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQP GGF GQASD E HA++I+ +KRRLNE+ + G++ EE+E+ DRD+ MS
Sbjct: 126 NSRIMIHQPLGGFQGQASDFEIHAKNILYMKRRLNELLALHTGRSIEEIERDTDRDNFMS 185
Query: 192 ASEACDWGVVDKVLMSRIDIE 212
+ EA +G++DK+L SR D +
Sbjct: 186 SEEALAYGLIDKMLQSRRDAQ 206
>gi|313906306|ref|ZP_07839649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
gi|313468862|gb|EFR64221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
cellulosolvens 6]
Length = 193
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT RGERSYDIYSRLLK+RI+F+ ++ D A L+ AQLLFLE+E+P K+I
Sbjct: 1 MPLIPYVIEQTGRGERSYDIYSRLLKDRIIFLGEEVNDVSANLVVAQLLFLESEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G KG R ALPNA I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGLAASMGAFLLAGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G+ASDIE A+ I+KIK+R+N I +N G+TYE+V+ + D+ ++A EA
Sbjct: 121 MIHQPSGGAQGKASDIEIVAEQILKIKKRMNTILAENTGQTYEKVKADTELDNYLTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ +R
Sbjct: 181 KAYGIIDSVITNR 193
>gi|145628436|ref|ZP_01784237.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|145633845|ref|ZP_01789567.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145637965|ref|ZP_01793604.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145639474|ref|ZP_01795079.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148826642|ref|YP_001291395.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148827882|ref|YP_001292635.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229845547|ref|ZP_04465675.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|229847178|ref|ZP_04467282.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|260583375|ref|ZP_05851146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|319775445|ref|YP_004137933.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
gi|166201826|sp|A5UE11|CLPP_HAEIE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201827|sp|A5UHJ6|CLPP_HAEIG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|144980211|gb|EDJ89870.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.1-21]
gi|144985287|gb|EDJ92126.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 3655]
gi|145268831|gb|EDK08795.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittHH]
gi|145271521|gb|EDK11433.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittII]
gi|148716802|gb|ABQ99012.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittEE]
gi|148719124|gb|ABR00252.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittGG]
gi|229809854|gb|EEP45576.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 7P49H1]
gi|229811563|gb|EEP47264.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 6P18H1]
gi|260093580|gb|EEW77497.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae NT127]
gi|309751687|gb|ADO81671.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2866]
gi|309973789|gb|ADO96990.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
influenzae R2846]
gi|317450036|emb|CBY86250.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3047]
Length = 193
Score = 241 bits (615), Expect = 6e-62, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LN+ + G++ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 QAYGLVDEVLVKR 193
>gi|326795825|ref|YP_004313645.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
gi|326546589|gb|ADZ91809.1| ATP-dependent Clp protease proteolytic subunit [Marinomonas
mediterranea MMB-1]
Length = 210
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 122/193 (63%), Positives = 156/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
GLVPMV+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 16 NGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESENPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+AG G R+ LPN+R+
Sbjct: 76 HLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRV 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQASDIE H ++I+ IK RLNEI + G+ E+V + DRD+ M+ A
Sbjct: 136 MIHQPLGGYQGQASDIEIHTREILSIKHRLNEIIAHHTGQPIEKVAEDTDRDNFMNPESA 195
Query: 196 CDWGVVDKVLMSR 208
++G++D +L R
Sbjct: 196 KEYGLIDDILEKR 208
>gi|153871192|ref|ZP_02000426.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
gi|152072341|gb|EDN69573.1| Peptidase S14, ClpP [Beggiatoa sp. PS]
Length = 228
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 122/205 (59%), Positives = 164/205 (80%), Gaps = 5/205 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+ A L+ AQLLFLE+ENP+K+I
Sbjct: 21 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYTANLVVAQLLFLESENPEKDIH 80
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V+AG+AIYDTMQFIKP +ST C+GQAASMG+LLLS G R+ LP++RI+
Sbjct: 81 LYINSPGGSVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLSGGADKKRYCLPHSRIM 140
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DI+ HA++I+K++ RLNEI K+ G+ E+++K +RD+ M+A A
Sbjct: 141 IHQPLGGFQGQATDIDIHAREILKVRERLNEILAKHSGQPLEKIQKDTERDNFMAAETAV 200
Query: 197 DWGVVDKVLMSR-----IDIEEKSK 216
++G+VD VL +R EE++K
Sbjct: 201 EYGLVDAVLSTRHALTAAATEEQTK 225
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 108/197 (54%), Positives = 154/197 (78%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+F+ LVP+VVEQTNRGER+YDI+SRLLK+RIVF+ +I D A+L+ AQ+LFLEAE+P K
Sbjct: 2 IFMSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDK 61
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG +TAG+AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+
Sbjct: 62 DIWLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNS 121
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
I++HQP GG GQA+DI+ HA+ +++++ +L I +N G+ E+++ ++RD+ M+A
Sbjct: 122 EIMIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAE 181
Query: 194 EACDWGVVDKVLMSRID 210
EA +G++D +L+
Sbjct: 182 EAKTYGIIDDILVRHKK 198
>gi|71281884|ref|YP_270452.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
gi|110816457|sp|Q47XL8|CLPP_COLP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71147624|gb|AAZ28097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Colwellia
psychrerythraea 34H]
Length = 220
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 126/195 (64%), Positives = 159/195 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+EDHMA LI AQLLFLE+E+P K+I
Sbjct: 25 SALVPMVVEQTAKGERSYDIYSRLLKERVIFLCGQVEDHMANLIIAQLLFLESESPDKDI 84
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM+FIKP IST C+GQAASMG+ LLS GEKG R+ LPNAR+
Sbjct: 85 YLYINSPGGSVTAGMAIYDTMKFIKPNISTVCIGQAASMGAFLLSGGEKGKRYCLPNARV 144
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASD E HA++I+ IK +LN++ ++ G+T ++V + DRD+ +SA A
Sbjct: 145 MIHQPLGGFQGQASDFEIHAKEILFIKDKLNKLMAEHTGQTLDKVSQDTDRDNFLSAEAA 204
Query: 196 CDWGVVDKVLMSRID 210
++G+VD +L R D
Sbjct: 205 VEYGLVDSILEQRND 219
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
gi|60389738|sp|Q7VP78|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 122/196 (62%), Positives = 161/196 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT++GERSYDIYSRLLKERI+F+ G++EDHMA LI AQLLFLEAE+P+K+I
Sbjct: 1 MAVIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G+KG RFALPNAR+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L ++ G+T+ +V +RD+ MSA+EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++DKVL SR ++
Sbjct: 181 KNYGLIDKVLTSRGEV 196
>gi|241204073|ref|YP_002975169.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857963|gb|ACS55630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 209
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 160/207 (77%), Positives = 186/207 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGTVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
H M A EA WGV+DKVL SR+++E +
Sbjct: 181 HFMDADEAQSWGVIDKVLTSRLEMEGE 207
>gi|268592036|ref|ZP_06126257.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
gi|291312428|gb|EFE52881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Providencia
rettgeri DSM 1131]
Length = 206
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 129/201 (64%), Positives = 167/201 (83%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ + LVPMV+EQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLE
Sbjct: 6 SQEQLASQMALVPMVIEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLE 65
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG R
Sbjct: 66 AENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGTKGKR 125
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQASDIE HAQ+I+K+K R+NE+ + GK+ EE+ + +RD
Sbjct: 126 FCLPNSRVMIHQPLGGYQGQASDIEIHAQEILKVKSRMNELMALHTGKSIEEITRDTERD 185
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+SA+EA ++G+VD++ SR
Sbjct: 186 RFLSANEAKEYGLVDQIYSSR 206
>gi|238754235|ref|ZP_04615592.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
gi|238707482|gb|EEP99842.1| ATP-dependent Clp protease proteolytic subunit [Yersinia ruckeri
ATCC 29473]
Length = 194
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 128/194 (65%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ K+ GK EE+E+ +RD +SA E+
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKSRMNELMAKHTGKPLEEIERDTERDRFLSAEES 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD + R
Sbjct: 181 VKYGLVDDIFNRRD 194
>gi|170760538|ref|YP_001788551.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A3 str. Loch Maree]
gi|226706446|sp|B1L1D7|CLPP_CLOBM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169407527|gb|ACA55938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A3 str. Loch Maree]
Length = 194
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ ++ D A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL AG KG R+ALPN+ +
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLVAGAKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+K+K++LN I GK E+VE +RDH +SA EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ +
Sbjct: 181 KEYGLIDEVIDKKK 194
>gi|294083692|ref|YP_003550449.1| protease subunit of ATP-dependent Clp protease [Candidatus
Puniceispirillum marinum IMCC1322]
gi|292663264|gb|ADE38365.1| Protease subunit of ATP-dependent Clp protease [Candidatus
Puniceispirillum marinum IMCC1322]
Length = 216
Score = 241 bits (614), Expect = 6e-62, Method: Composition-based stats.
Identities = 128/207 (61%), Positives = 172/207 (83%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
K + D LVPMVVEQTNRGERSYDI+SRLLKERI+F+ G ++D A+L+C+QLLFLE+
Sbjct: 8 KSNFDPMANLVPMVVEQTNRGERSYDIFSRLLKERIIFLNGPVDDTTASLVCSQLLFLES 67
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP K+IS+YINSPGG+VT+G+AIYDTM++I+P +ST CMGQAASMGSLLL AG G R+
Sbjct: 68 ENPTKDISMYINSPGGIVTSGLAIYDTMEYIRPDVSTVCMGQAASMGSLLLMAGAAGKRY 127
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNARI+ HQPSGGFSGQASDIE HA++I+ +++RLN +YVK+ GKT ++VEK ++RD
Sbjct: 128 SLPNARIMTHQPSGGFSGQASDIEIHAREILDLRKRLNGMYVKHTGKTLKDVEKIMERDT 187
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
M+A +A +G++D+V+ R +++
Sbjct: 188 FMTAEDAQKFGLIDEVVEKRPAGKDEK 214
>gi|299143348|ref|ZP_07036428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517833|gb|EFI41572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 194
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTN GERSYDIYSRLLKERI+F++G+I D A L+ AQLLFLEAE+ K+I
Sbjct: 1 MALVPMVVEQTNHGERSYDIYSRLLKERIIFLSGEINDVTADLVVAQLLFLEAEDQNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG AIYDT+++IK +ST +G AASMG+ LL+AG KG RFALPNA I
Sbjct: 61 QIYINSPGGSVSAGFAIYDTIKYIKCDVSTMVIGLAASMGAFLLAAGTKGKRFALPNADI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ HA+ I++I+ R+N+I + G+ E+VE+ DRD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQASDIKIHAEKILEIRERINKILSEETGQPLEKVERDTDRDYYLSAKEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKV+ R
Sbjct: 181 VEYGLIDKVIEKRD 194
>gi|60416366|sp|Q8RC25|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 107/195 (54%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGER+YDI+SRLLK+RIVF+ +I D A+L+ AQ+LFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERAYDIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG+AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+ I
Sbjct: 61 WLYINSPGGSITAGLAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ +++++ +L I +N G+ E+++ ++RD+ M+A EA
Sbjct: 121 MIHQPWGGMQGQATDIKIHAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D +L+
Sbjct: 181 KTYGIIDDILVRHKK 195
>gi|311107153|ref|YP_003980006.1| ATP-dependent Clp protease proteolytic subunit ClpP [Achromobacter
xylosoxidans A8]
gi|310761842|gb|ADP17291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Achromobacter
xylosoxidans A8]
Length = 217
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 117/195 (60%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AGMAI+DTMQF+KP +ST C G AASMG+ LL+AG+KG RF LPN+RI
Sbjct: 82 SLYINSPGGSVYAGMAIFDTMQFVKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I +N G+T E + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILDLRERLNRILAENTGQTMERIGIDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRID 210
+G+VDKV+ SR +
Sbjct: 202 VSYGLVDKVMTSRSE 216
>gi|188581623|ref|YP_001925068.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
populi BJ001]
gi|226706462|sp|B1Z9C7|CLPP_METPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179345121|gb|ACB80533.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium populi BJ001]
Length = 208
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 131/204 (64%), Positives = 170/204 (83%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D F LVPMVVEQ++RGER++DIYSRLL+ERI+F+TG +ED A+LI AQLLFL
Sbjct: 1 MRDPVDYFHNSLVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDQGASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+GQAASMGSLLL+AGE G
Sbjct: 61 EAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGH 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQA+DI HA++I +K+RLNEIYVK+ G+ YE + + L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQATDILIHAREIEALKKRLNEIYVKHTGRDYETIHQALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A A ++G++D +L R +
Sbjct: 181 DNFMTADAAKEFGLIDDILHKRPE 204
>gi|148381180|ref|YP_001255721.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 3502]
gi|153933152|ref|YP_001385555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 19397]
gi|153934525|ref|YP_001388961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. Hall]
gi|153939192|ref|YP_001392582.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. Langeland]
gi|168179119|ref|ZP_02613783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|168183548|ref|ZP_02618212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|170754567|ref|YP_001782870.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B1 str. Okra]
gi|226950659|ref|YP_002805750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A2 str. Kyoto]
gi|237796687|ref|YP_002864239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Ba4 str. 657]
gi|166201814|sp|A7FYI2|CLPP_CLOB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201815|sp|A5I6W1|CLPP_CLOBH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201816|sp|A7GIH2|CLPP_CLOBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706445|sp|B1IND7|CLPP_CLOBK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763786|sp|C1FLA6|CLPP_CLOBJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148290664|emb|CAL84793.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum A str. ATCC 3502]
gi|152929196|gb|ABS34696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. ATCC 19397]
gi|152930439|gb|ABS35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A str. Hall]
gi|152935088|gb|ABS40586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. Langeland]
gi|169119779|gb|ACA43615.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B1 str. Okra]
gi|182670165|gb|EDT82141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum NCTC 2916]
gi|182673367|gb|EDT85328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Bf]
gi|226842960|gb|ACO85626.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum A2 str. Kyoto]
gi|229261301|gb|ACQ52334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum Ba4 str. 657]
gi|295320566|gb|ADG00944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum F str. 230613]
gi|322807545|emb|CBZ05120.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum H04402 065]
Length = 194
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ ++ D A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R+ALPN+ +
Sbjct: 61 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+K+K++LN I GK E+VE +RDH +SA EA
Sbjct: 121 MIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ +
Sbjct: 181 KEYGLIDEVIDKKK 194
>gi|17546430|ref|NP_519832.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum GMI1000]
gi|83745913|ref|ZP_00942970.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|207724193|ref|YP_002254591.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|207743049|ref|YP_002259441.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|300691404|ref|YP_003752399.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
gi|300703972|ref|YP_003745574.1| proteolytic subunit of clpa-clpp ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|22653696|sp|Q8XYP7|CLPP_RALSO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|17428728|emb|CAD15413.1| probable atp-atp-dependent clp protease proteolytic subunit
(endopeptidase clp). transmembrane protein [Ralstonia
solanacearum GMI1000]
gi|83727603|gb|EAP74724.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia
solanacearum UW551]
gi|206589403|emb|CAQ36365.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum MolK2]
gi|206594446|emb|CAQ61373.1| atp-atp-dependent clp protease proteolytic subunit (endopeptidase
clp) protein [Ralstonia solanacearum IPO1609]
gi|299066731|emb|CBJ37925.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CMR15]
gi|299071635|emb|CBJ42959.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum CFBP2957]
gi|299078464|emb|CBJ51116.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Ralstonia solanacearum PSI07]
Length = 217
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 155/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AG+A+YDTMQF+KP +ST CMG AASMG+ LL+AG KG R+ALPN+RI
Sbjct: 83 SLYINSPGGSVSAGLAMYDTMQFVKPDVSTLCMGMAASMGAFLLAAGAKGKRYALPNSRI 142
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ ++ RLN I + G+ +++ + DRD+ MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQA 202
Query: 196 CDWGVVDKVLMSR 208
++G++DKVL R
Sbjct: 203 KEYGLIDKVLARR 215
>gi|238795542|ref|ZP_04639057.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
gi|238720661|gb|EEQ12462.1| ATP-dependent Clp protease proteolytic subunit [Yersinia mollaretii
ATCC 43969]
Length = 194
Score = 241 bits (614), Expect = 7e-62, Method: Composition-based stats.
Identities = 129/194 (66%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 MALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLITAQMLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+AG KG RF LPN+R+
Sbjct: 61 FLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLTAGAKGKRFCLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DIE HA++I+K+K R+NE+ + GK+ EE+E+ +RD +SA EA
Sbjct: 121 MIHQPLGGFQGQATDIEIHAREILKVKSRMNELMALHTGKSLEEIERDTERDRFLSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V R
Sbjct: 181 VGYGLVDSVFTRRD 194
>gi|114569888|ref|YP_756568.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis
maris MCS10]
gi|122316141|sp|Q0AQ07|CLPP_MARMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114340350|gb|ABI65630.1| ATP-dependent Clp protease proteolytic subunit ClpP [Maricaulis
maris MCS10]
Length = 211
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 147/207 (71%), Positives = 179/207 (86%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D +DV + LVP+VVEQT+RGERS+DIYSRLLKERI+F+TG IEDHMA+LI AQLLFLE
Sbjct: 1 MHDPQDVMMNLVPIVVEQTSRGERSFDIYSRLLKERIIFITGPIEDHMASLIIAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+KEIS+YINSPGGVV+AG+ IYDTMQ+I+ P+ST C+G AASMGSLLL+AGEK MR
Sbjct: 61 SENPKKEISMYINSPGGVVSAGLGIYDTMQYIRSPVSTMCLGMAASMGSLLLTAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGGF GQASDIERHA DI KIKRRLNEIYV + G+TY+E+E LDRD
Sbjct: 121 FAAPNARIMVHQPSGGFRGQASDIERHAADIQKIKRRLNEIYVHHTGRTYDEIESALDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ MSA E ++G+VDKV+ R + E++
Sbjct: 181 NFMSAQEGLEFGLVDKVIERRAEDEKE 207
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMVVEQ+NRGER+YDIYSRLLK+RI+F+ + D +A I AQ+LFL AE+P+K+I
Sbjct: 1 MSFIPMVVEQSNRGERAYDIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAI+DTMQFIKP +ST C+G AASMG+ LL+AG KG R+ LPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A+ I+K++ +LN I G+ E +EK DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILSDRTGQPLERIEKDTDRDYFMTADEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+VL +
Sbjct: 181 KEYGLIDQVLEN 192
>gi|86357224|ref|YP_469116.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CFN
42]
gi|190891272|ref|YP_001977814.1| endopeptidase Clp protein, subunit 2 [Rhizobium etli CIAT 652]
gi|209548850|ref|YP_002280767.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|116243117|sp|Q2K9U7|CLPP2_RHIEC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86281326|gb|ABC90389.1| endopeptidase Clp, subunit 2 protein [Rhizobium etli CFN 42]
gi|190696551|gb|ACE90636.1| endopeptidase Clp protein, subunit 2 [Rhizobium etli CIAT 652]
gi|209534606|gb|ACI54541.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|327188463|gb|EGE55677.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
CNPAF512]
Length = 209
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 160/207 (77%), Positives = 186/207 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ D + LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLE
Sbjct: 1 MRNPVDTAMALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEI+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MR
Sbjct: 61 AENPKKEIALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PN+RI++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRD
Sbjct: 121 FATPNSRIMVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
H M A EA WGV+DKVL SR+++E +
Sbjct: 181 HFMDADEAQGWGVIDKVLTSRLEMEGE 207
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 115/195 (58%), Positives = 152/195 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDIYSRLLK+RI+F+ I+DH+A L+ AQ+LFLEAE+P K+
Sbjct: 1 MSVLVPMVVEQTSRGERAYDIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG ++AGMAI+DTMQ+I+P +ST C+G AASMG+ LL+AG KG RFALPN+
Sbjct: 61 IHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA DIE HA+ I+ I+ LN I + GK E++ + DRDH M+A E
Sbjct: 121 IMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMTARE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D+V+ R
Sbjct: 181 AREYGLIDEVITKRE 195
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 156/190 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+D++A L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTM++IK P+ST C+GQAASMG+ LLS GEKG R++L N+RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HA++I+++K +LN + ++ G++ E+V +RD+ MS EA +
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAKN 181
Query: 198 WGVVDKVLMS 207
+G++D ++
Sbjct: 182 YGIIDAIVTR 191
>gi|163743918|ref|ZP_02151288.1| Protease subunit of ATP-dependent Clp protease [Phaeobacter
gallaeciensis 2.10]
gi|161382763|gb|EDQ07162.1| Protease subunit of ATP-dependent Clp protease [Phaeobacter
gallaeciensis 2.10]
Length = 202
Score = 240 bits (613), Expect = 8e-62, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 170/201 (84%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGGF GQA+DI HA++ +K+K+RLNEIYVK+ G+ Y+++ L+RD+ MS E
Sbjct: 121 VMVHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQEYDKIVDALERDNFMSPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A D+G++D+++ +R ++++
Sbjct: 181 AKDFGLIDEIVENRSKLDDQD 201
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 120/194 (61%), Positives = 158/194 (81%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+VVEQTNRGERSYDIYSRLLK+RI+F+ G IED+ A LI AQLLFLEAE+P+K+
Sbjct: 1 MSTLVPIVVEQTNRGERSYDIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAGMAIYDTMQ+IKPP+ST C+GQAASMGS LL+AG G RFALP AR
Sbjct: 61 IHLYINSPGGVVTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG GQA+DI HA++I+++K LN++ K+ + +++ + +RD MSA +
Sbjct: 121 IMIHQPSGGMQGQATDIGIHAKEILRMKEILNKLLSKHTKQPLDKITRDSERDFFMSAED 180
Query: 195 ACDWGVVDKVLMSR 208
A ++G++D+++ +
Sbjct: 181 AKEYGIIDQIVTRK 194
>gi|145642383|ref|ZP_01797943.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae R3021]
gi|145272926|gb|EDK12812.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.4-21]
Length = 193
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIK I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKSDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LN+ + G++ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 QAYGLVDEVLVKR 193
>gi|292487467|ref|YP_003530339.1| ATP-dependent Clp protease proteolytic subunit ClpP [Erwinia
amylovora CFBP1430]
gi|292898709|ref|YP_003538078.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291198557|emb|CBJ45665.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552886|emb|CBA19931.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora CFBP1430]
gi|312171571|emb|CBX79829.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
amylovora ATCC BAA-2158]
Length = 207
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+K K+ +NE+ K+ G+T E +
Sbjct: 119 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIENI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASE+ ++G+VD VL R
Sbjct: 179 ERDTNRDRFLSASESVEYGLVDSVLSQRN 207
>gi|253579815|ref|ZP_04857083.1| clp protease [Ruminococcus sp. 5_1_39B_FAA]
gi|251848814|gb|EES76776.1| clp protease [Ruminococcus sp. 5_1_39BFAA]
Length = 193
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 148/193 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A LI +QLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSAGLIVSQLLFLEAEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G KG RFALP++ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTICLGMAASMGAFLLAGGAKGKRFALPHSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I + KR LNE+ N G+ E VE+ DRD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADHIAQTKRTLNELLAANTGQPIEVVERDTDRDNYMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+M +
Sbjct: 181 KAYGLIDGVVMHK 193
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 155/190 (81%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+D++A L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTM++IK P+ST C+GQAASMG+ LLS GEKG R++L N+RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HA++I+++K LN + ++ G++ E+V +RD+ MS EA +
Sbjct: 122 HQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAKN 181
Query: 198 WGVVDKVLMS 207
+G++D ++
Sbjct: 182 YGIIDAIVTR 191
>gi|186475312|ref|YP_001856782.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phymatum STM815]
gi|184191771|gb|ACC69736.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phymatum STM815]
Length = 217
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 114/203 (56%), Positives = 152/203 (74%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ LVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + D A+LI AQLLFLE+E
Sbjct: 7 SPANTGFNLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNDQSASLIVAQLLFLESE 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+IS YINSPGG V G+AI+DTMQFIKP +ST C G AASMG+ LL+AG G R+A
Sbjct: 67 NPDKDISFYINSPGGSVYDGLAIFDTMQFIKPDVSTLCTGFAASMGTFLLAAGAPGKRYA 126
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGG G ASD+E HA++++ ++ RLN++ + G++ ++EK DRD+
Sbjct: 127 LPNARIMIHQPSGGGQGTASDVEIHAKEVLYLRERLNDVLAQRTGQSIAQIEKDTDRDNF 186
Query: 190 MSASEACDWGVVDKVLMSRIDIE 212
MSA A +G+VD VL +R+ +
Sbjct: 187 MSAEAAKTYGLVDDVLTTRVPLP 209
>gi|39996891|ref|NP_952842.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
sulfurreducens PCA]
gi|60389697|sp|Q74C82|CLPP_GEOSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39983779|gb|AAR35169.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens PCA]
gi|298505904|gb|ADI84627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
sulfurreducens KN400]
Length = 199
Score = 240 bits (613), Expect = 9e-62, Method: Composition-based stats.
Identities = 122/192 (63%), Positives = 159/192 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G ++DH+A L+ AQ+LFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPVDDHVANLVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+GMAIYDTMQ+IK P+ST C+GQAASMG+LLLS GEKG RF+L ++RI++
Sbjct: 62 YINSPGGVVTSGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLKHSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HAQ+I+K+K+RLNEI +N G+ +VE +RD+ MS +EA D
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILKLKKRLNEILAENTGQQLAKVEADTERDYFMSGAEAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D ++
Sbjct: 182 YGIIDNIIERNT 193
>gi|303239032|ref|ZP_07325562.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acetivibrio
cellulolyticus CD2]
gi|302593370|gb|EFL63088.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acetivibrio
cellulolyticus CD2]
Length = 194
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/194 (57%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RI+ ++ ++ D A+L+ AQ+LFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIFSRLLKDRIILLSDEVNDVTASLVVAQMLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG AIYDTMQ++KP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 QLYINSPGGSVSAGFAIYDTMQYVKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ HA+ I+K + RLN I + G+ E++E +RD MSA EA
Sbjct: 121 MIHQPLGGTRGQATEIKIHAEHILKTRDRLNRILSEKTGQPLEKIEADTERDFFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V+ R
Sbjct: 181 KAYGLVDDVMERRK 194
>gi|86137328|ref|ZP_01055905.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
MED193]
gi|85825663|gb|EAQ45861.1| Protease subunit of ATP-dependent Clp protease [Roseobacter sp.
MED193]
Length = 202
Score = 240 bits (613), Expect = 1e-61, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 167/201 (83%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGGF GQA+DI HA++ +K+KRRLNEIYVK+ G+ ++VE L+RD+ M E
Sbjct: 121 VMVHQPSGGFQGQATDIMIHAEETLKLKRRLNEIYVKHTGQELDKVEAALERDNFMDPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A +G++D+++ +R +++
Sbjct: 181 AKAFGLIDEIVENRAKGDDEE 201
>gi|218133242|ref|ZP_03462046.1| hypothetical protein BACPEC_01107 [Bacteroides pectinophilus ATCC
43243]
gi|217992115|gb|EEC58119.1| hypothetical protein BACPEC_01107 [Bacteroides pectinophilus ATCC
43243]
Length = 193
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 145/193 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A+LI AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASLIVAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG VTAGMAIYDTM ++K +ST C+G AASMG+ LLS G KG R ALPNA I
Sbjct: 61 NFYINSPGGSVTAGMAIYDTMNYVKCDVSTICIGMAASMGAFLLSGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ + I+K + +LN I N GK + + +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATDIKIVSDHIIKTRHKLNTILAANTGKPLDVIAVDTERDNYMSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D V+ R
Sbjct: 181 VEYGLIDSVIEKR 193
>gi|121611285|ref|YP_999092.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
gi|166214720|sp|A1WR17|CLPP_VEREI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121555925|gb|ABM60074.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
Length = 202
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/202 (55%), Positives = 156/202 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E LG++PMV+EQ+ RGERSYDIYSRLLKER++F+ G + D A L+ AQLLFLE
Sbjct: 1 MNALETQGLGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDQTANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+IS YINSPGG V+AGMAI+DTM FIKP +ST C G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISFYINSPGGSVSAGMAIFDTMNFIKPDVSTLCTGMAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+++++HQP GG GQA++IE HA++I+K + +LN+I + G+ E++++ +RD
Sbjct: 121 FALPNSKVMIHQPLGGMQGQATEIEIHAREILKTREQLNKILAERTGQPLEKIQRDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ +SA E+ ++G+VD+V+ R
Sbjct: 181 YFLSADESREYGLVDQVIHRRS 202
>gi|187925164|ref|YP_001896806.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
phytofirmans PsJN]
gi|187716358|gb|ACD17582.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
phytofirmans PsJN]
Length = 215
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/206 (54%), Positives = 151/206 (73%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLF
Sbjct: 1 MHSNYPNITGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+I YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL+AG++G
Sbjct: 61 LESENPDKDICFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+D+E A++++ ++ RLN + + G++ E + + D
Sbjct: 121 KRYALPNARIMIHQPSGGSQGTAADVEIQAKEVLYLRERLNAMMAERTGRSIEAIARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD+ MSA A +G+VD+VL +R +
Sbjct: 181 RDNFMSAQSAKTYGLVDEVLETRAAL 206
>gi|315645729|ref|ZP_07898853.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
gi|315279207|gb|EFU42517.1| hypothetical protein PVOR_09635 [Paenibacillus vortex V453]
Length = 196
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 120/192 (62%), Positives = 153/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDIYSRLLK+RI+F++ I+D +A L+ AQLLFL AE+P+K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGM IYDTMQ IKP +ST C+G AASMGSLLL+AG G R+AL N+ +
Sbjct: 61 SLYINSPGGSVTAGMGIYDTMQLIKPDVSTICVGMAASMGSLLLTAGAPGKRYALENSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ HA I+K + +LN+IYV+ G+ E++E+ DRD MSA EA
Sbjct: 121 MIHQPLGGIQGQASDIQIHADWIIKTRHKLNQIYVERTGQPLEKIERDTDRDFFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D VL S
Sbjct: 181 KAYGIIDDVLSS 192
>gi|120554758|ref|YP_959109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
gi|120324607|gb|ABM18922.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marinobacter
aquaeolei VT8]
Length = 211
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/197 (56%), Positives = 156/197 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
GLVP+V+EQT RGERS+DIYSRLLKER++F+ G +EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 15 SGLVPIVIEQTARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQLLFLESENPDKDI 74
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AGM+IYDTMQF+KP ++T C+GQAASMG+ LLS G KG R LP++R+
Sbjct: 75 HLYINSPGGSVSAGMSIYDTMQFVKPDVATLCIGQAASMGAFLLSGGAKGKRACLPHSRV 134
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE H ++I+KI+ LNE+ ++ G+ E + + DRD+ M ++A
Sbjct: 135 MIHQPLGGYQGQATDIEIHTREILKIRNTLNELLAEHTGQDIETIARDTDRDNFMDPAQA 194
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D +L R+ +
Sbjct: 195 KEYGLIDTILDKRVSNK 211
>gi|254467045|ref|ZP_05080456.1| Clp protease [Rhodobacterales bacterium Y4I]
gi|206687953|gb|EDZ48435.1| Clp protease [Rhodobacterales bacterium Y4I]
Length = 202
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 128/200 (64%), Positives = 168/200 (84%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+FV G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFVNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGEKGMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEKGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGGF GQA+DI HA++ +K+K+RLNEIYVK+ G+ YE V L+RD+ MS E
Sbjct: 121 VMVHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQDYETVVNALERDNFMSPEE 180
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A +G++D+++ +R +++
Sbjct: 181 AKAFGLIDEIVENRAKGDDE 200
>gi|254282219|ref|ZP_04957187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
gi|219678422|gb|EED34771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium NOR51-B]
Length = 220
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 125/216 (57%), Positives = 165/216 (76%), Gaps = 3/216 (1%)
Query: 2 SFEGCAKKDSED---VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATL 58
S E +D+ LGLVPMV+EQT+RGERS+DIYSRLLKER++FV G IEDHMA L
Sbjct: 5 SIEKAMIRDTSPGDIQNLGLVPMVIEQTSRGERSFDIYSRLLKERVIFVVGGIEDHMANL 64
Query: 59 ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLL 118
I AQLLFLE+ENP K+I +YINSPGG VTAG++IYDTMQF+KP +ST C+GQAASMG+ L
Sbjct: 65 IVAQLLFLESENPDKDIHIYINSPGGSVTAGLSIYDTMQFVKPDVSTMCIGQAASMGAFL 124
Query: 119 LSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
LS G KG R+ LPNAR ++HQPSGG GQASDIE A++I+ ++ RLN + + G+T E
Sbjct: 125 LSGGAKGKRYILPNARTMIHQPSGGAQGQASDIEIQAKEILYLRERLNRLMADHTGQTLE 184
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+E+ +RD MSA ++ ++G+VD+V+ +R+ +
Sbjct: 185 TIERDTERDRFMSAEQSVEYGLVDEVVENRVAAPDA 220
>gi|330808572|ref|YP_004353034.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit
ClpP) [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|327376680|gb|AEA68030.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit
ClpP) [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
Length = 211
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG G R+ LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAHGKRYCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G+T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGRTLEEIERDTNRDNFMSAEAAR 197
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 198 EYGLIDEVINQRP 210
>gi|254468869|ref|ZP_05082275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
gi|207087679|gb|EDZ64962.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium KB13]
Length = 207
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 158/201 (78%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + V LG +PMVVEQ+ RGERSYDIYSRLLKER+VF+ G ++D A L+ AQLLFLE
Sbjct: 7 SRSNTPVGLGYIPMVVEQSGRGERSYDIYSRLLKERVVFLVGPVDDMTANLVVAQLLFLE 66
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP K+ISLYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+LLL+AG K R
Sbjct: 67 AENPDKDISLYINSPGGSVTAGMAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKR 126
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GGF GQASDIE HA++I+ +K +LN I + G+ + + K DRD
Sbjct: 127 FCLPNSRVMIHQPLGGFQGQASDIEIHAKEILYLKDKLNRILSHHTGQDIKTISKDTDRD 186
Query: 188 HIMSASEACDWGVVDKVLMSR 208
+ MS+ +A +G+VDKV+ R
Sbjct: 187 NFMSSEDAVKYGLVDKVINER 207
>gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
metallidurans CH34]
gi|116243154|sp|Q1LM62|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Cupriavidus metallidurans CH34]
Length = 216
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 119/194 (61%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP K++
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDV 82
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AG+AIYDTMQFIKP + T CMG AASMG+ LL+AG KG R ALPN+RI
Sbjct: 83 SLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSRI 142
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ ++ RLN I + G+ E++ + DRD+ MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQA 202
Query: 196 CDWGVVDKVLMSRI 209
D+G++DKV+ R
Sbjct: 203 VDYGLIDKVITRRS 216
>gi|75676090|ref|YP_318511.1| peptidase S14, ClpP [Nitrobacter winogradskyi Nb-255]
gi|90101410|sp|Q3SRD2|CLPP_NITWN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74420960|gb|ABA05159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrobacter
winogradskyi Nb-255]
Length = 212
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 139/209 (66%), Positives = 176/209 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + ++ LVPMVVEQTNRGER+YDI+SRLLKERI+FVTG +ED+M+ L+ AQLLFLE
Sbjct: 1 MRDPVETYMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVTGGVEDNMSMLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQFI+PP++T C GQAASMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQFIRPPVATLCTGQAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNARI++HQPSGGF GQA+DI HAQ+I+ +K+RLNEIYVK+ G+TY+ +E L+RD
Sbjct: 121 HALPNARIMVHQPSGGFQGQATDIMLHAQEILSLKKRLNEIYVKHTGQTYQAIEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++A A D+G+VDKV+ R + K
Sbjct: 181 KFLTADMARDFGIVDKVIDKRAEDPAAPK 209
>gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis ATCC 14580]
gi|52787393|ref|YP_093222.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis ATCC 14580]
gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|67460468|sp|Q65EI5|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis ATCC 14580]
gi|52349895|gb|AAU42529.1| ClpP [Bacillus licheniformis ATCC 14580]
gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
Length = 198
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/198 (56%), Positives = 156/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I + G+ E +E+ DRD+ +A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++DKVL ID ++
Sbjct: 181 KEYGLIDKVLTRNIDAQK 198
>gi|319408364|emb|CBI82017.1| ATP-dependent Clp protease, proteolytic subunit [Bartonella
schoenbuchensis R1]
Length = 210
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 148/208 (71%), Positives = 178/208 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D L LVPMVVEQTNRGER+YDI+SRLLKERI+F+ G +ED MA L+CAQLLFLE
Sbjct: 1 MSDPIKTALNLVPMVVEQTNRGERAYDIFSRLLKERIIFINGPVEDGMAMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+GMAIYDTMQFI+PP+ST CMGQAASMGSLLL+AG KG R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGMAIYDTMQFIRPPVSTLCMGQAASMGSLLLTAGAKGHR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPNARI++HQPSGGF GQ SDIERHAQDI+K+K+RLNEIYV++ G+ YE +EKTLDRD
Sbjct: 121 FSLPNARIMVHQPSGGFQGQVSDIERHAQDIIKMKQRLNEIYVQHTGQDYEIIEKTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKS 215
H M+A E+ ++G++D V+ R E++
Sbjct: 181 HFMTAEESKNFGLIDDVIQYRTVTEKEE 208
>gi|255067667|ref|ZP_05319522.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
sicca ATCC 29256]
gi|255048141|gb|EET43605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
sicca ATCC 29256]
Length = 206
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 189 KEYGLIDQVLENRASLQ 205
>gi|229827570|ref|ZP_04453639.1| hypothetical protein GCWU000182_02959 [Abiotrophia defectiva ATCC
49176]
gi|229788208|gb|EEP24322.1| hypothetical protein GCWU000182_02959 [Abiotrophia defectiva ATCC
49176]
Length = 194
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 112/194 (57%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLL++RI+F+ ++ D A++I AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLEDRIIFLGEEVTDVSASVIIAQLLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM +IK +ST CMG AASMG+ LL+ G KG R ALPN+ I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMNYIKCDVSTICMGLAASMGAFLLAGGTKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A +I+K ++RLNE+ N G+ E++E+ +RD+ M+A EA
Sbjct: 121 MIHQPSGGARGQASDIKIVADNIIKTRKRLNEMLAANTGRPLEDIERDTERDNFMTAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+++ R
Sbjct: 181 KAYGLIDEIVTKRA 194
>gi|261405359|ref|YP_003241600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329923469|ref|ZP_08278950.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261281822|gb|ACX63793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328941269|gb|EGG37564.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 196
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 120/192 (62%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDIYSRLLK+RI+F++ I+D +A L+ AQLLFL AE+P+K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIYSRLLKDRIIFLSSAIDDDVANLVIAQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGM IYDTMQ IKP +ST C+G AASMGSLLL+AG G R+AL N+ +
Sbjct: 61 SLYINSPGGSVTAGMGIYDTMQLIKPDVSTICVGMAASMGSLLLTAGAPGKRYALENSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ HA I+K +++LN+IYV+ G+ E++E+ DRD MSA EA
Sbjct: 121 MIHQPLGGIQGQASDIQIHADWIIKTRQKLNQIYVERTGQPLEKIERDTDRDFFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D VL S
Sbjct: 181 KAYGIIDDVLSS 192
>gi|187776850|ref|ZP_02993323.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC
15579]
gi|187775509|gb|EDU39311.1| hypothetical protein CLOSPO_00389 [Clostridium sporogenes ATCC
15579]
Length = 194
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ ++ D A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSEEVNDTTASLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R+ALPN+ +
Sbjct: 61 YLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+K+K++LN I GK E+VE +RDH +SA EA
Sbjct: 121 MIHQPLGGFRGQATDIGIHAERILKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ +
Sbjct: 181 KEYGLIDEVIDKKK 194
>gi|84499432|ref|ZP_00997720.1| Protease subunit of ATP-dependent Clp protease [Oceanicola
batsensis HTCC2597]
gi|84392576|gb|EAQ04787.1| Protease subunit of ATP-dependent Clp protease [Oceanicola
batsensis HTCC2597]
Length = 210
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 125/209 (59%), Positives = 162/209 (77%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
E+ LVPMVVEQT+RGER+YDI+SRLLKERI+FV+G + D M++LI AQLL L
Sbjct: 1 MSDLYENYMNNLVPMVVEQTSRGERAYDIFSRLLKERIIFVSGPVHDGMSSLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP K+IS+YINSPGGVVT+G++IYDTMQ+IKP + T +GQAASMGSLLL+ G GM
Sbjct: 61 EAENPTKDISMYINSPGGVVTSGLSIYDTMQYIKPKVGTLVIGQAASMGSLLLAGGAAGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ALPNA I++HQPSGG+ GQA+DI HA+ K+K RLN+IYVK+ G+ +E V L+R
Sbjct: 121 RYALPNAEIMVHQPSGGYRGQATDIMIHARHTEKLKERLNKIYVKHTGQDFETVVDALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ M+A EA DWG++D++ SR +
Sbjct: 181 DNFMTAEEAKDWGLIDEIFESRPKADGDD 209
>gi|289577854|ref|YP_003476481.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|297544142|ref|YP_003676444.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|289527567|gb|ADD01919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter italicus Ab9]
gi|296841917|gb|ADH60433.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 195
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RIVF+ +I D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+ I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K++ +L+ I +N G+ E+++ +RD M A +A
Sbjct: 121 MIHQPLGGMHGQATDIKIHAERILKLRDKLDRILAENTGQPIEKIKADTERDFFMDAEDA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+VL+
Sbjct: 181 KAYGIIDEVLIRNK 194
>gi|160893842|ref|ZP_02074625.1| hypothetical protein CLOL250_01396 [Clostridium sp. L2-50]
gi|156864494|gb|EDO57925.1| hypothetical protein CLOL250_01396 [Clostridium sp. L2-50]
Length = 193
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 149/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A+++ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDTSASIVIAQLLFLESEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAG+ IYDTMQ+IK +ST C G AASMG+ LL+ G KG RFALPNA I
Sbjct: 61 SLYINSPGGSVTAGLGIYDTMQYIKCDVSTICCGMAASMGAFLLAGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++IE A+ I+K K +LN + +N GK YE + +RD+ MSA EA
Sbjct: 121 MIHQPSGGSQGQATEIEIAAKHILKTKEKLNRMLSENTGKPYETIAADTERDNWMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
C +G++D V+ R
Sbjct: 181 CAYGLIDSVIAKR 193
>gi|78223080|ref|YP_384827.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
metallireducens GS-15]
gi|90101408|sp|Q39UH2|CLPP_GEOMG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78194335|gb|ABB32102.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
metallireducens GS-15]
Length = 199
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 125/192 (65%), Positives = 159/192 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+DH+A L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGPIDDHVANLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IK P+ST C+GQAASMG+LLLS GEKG RF+L ++RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGALLLSGGEKGKRFSLTHSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HAQ+I+K+K+RLNEI +N G+ E+VE +RD+ MS EA
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILKMKKRLNEIIAENSGQALEKVEADTERDYFMSGEEAKS 181
Query: 198 WGVVDKVLMSRI 209
+G++D ++ +
Sbjct: 182 YGIIDAIIARKP 193
>gi|85713354|ref|ZP_01044368.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica
OS145]
gi|85692821|gb|EAQ30805.1| Protease subunit of ATP-dependent Clp protease [Idiomarina baltica
OS145]
Length = 205
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 128/204 (62%), Positives = 161/204 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D +D LVPMVVEQT++GERSYDIYSRLLKER++F GQ+EDHMA LI AQLLFL
Sbjct: 1 MSNDIQDPMAQLVPMVVEQTSKGERSYDIYSRLLKERVIFCCGQVEDHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E++NP K+I LYINSPGGVVTAGMAIYDTM+FIKP +ST CMGQAASMG+ LL+ G +G
Sbjct: 61 ESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAGGAQGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPN+R+++HQP GGF GQASD E HA+ I+ +K RLN + +N G+ YE+V + DR
Sbjct: 121 RYCLPNSRVMIHQPLGGFQGQASDFEIHAKQILDLKERLNRMLAENTGQDYEKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
DH ++A EA D+G+VD +L R +
Sbjct: 181 DHFLTAPEAVDYGLVDGILNKRGE 204
>gi|88800033|ref|ZP_01115603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea sp.
MED297]
gi|88777159|gb|EAR08364.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Reinekea sp.
MED297]
Length = 209
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 126/192 (65%), Positives = 164/192 (85%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQT+RGERS+DIYSRLLKE ++F+ GQ+ED+MA L+ AQLLFLE+ENP K+I
Sbjct: 18 GLVPMVVEQTSRGERSFDIYSRLLKENVIFLVGQVEDYMANLVVAQLLFLESENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+LLL+ G KG R+ LPN+R++
Sbjct: 78 LYINSPGGSVTAGMAIYDTMQFIKPDVSTMCIGQAASMGALLLTGGAKGKRYCLPNSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQA+DIE HA++I+++KRRLNEI + G+ E+VE+ DRD+ M+A +A
Sbjct: 138 IHQPLGGYQGQATDIEIHAREILEMKRRLNEIMAHHTGRPLEDVERDTDRDNFMTAEQAV 197
Query: 197 DWGVVDKVLMSR 208
D+G+VD+V+ +R
Sbjct: 198 DYGLVDQVITNR 209
>gi|167746334|ref|ZP_02418461.1| hypothetical protein ANACAC_01043 [Anaerostipes caccae DSM 14662]
gi|317470744|ref|ZP_07930129.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
gi|167654327|gb|EDR98456.1| hypothetical protein ANACAC_01043 [Anaerostipes caccae DSM 14662]
gi|316901879|gb|EFV23808.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
Length = 196
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 117/195 (60%), Positives = 151/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A+LI +QLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDVSASLIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTM FIK +ST CMG AASMGS LLS G KG R ALPNA I
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMNFIKCDVSTICMGMAASMGSFLLSGGAKGKRMALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I+ A+ I++ K+RLN I +N GK E +E+ DRD+ ++A EA
Sbjct: 121 MIHQPMGGAQGQATEIQIAAEHILQTKKRLNRILSENTGKPLEVIERDTDRDNWLTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D V + +
Sbjct: 181 VEYGLIDAVFDKKRE 195
>gi|285017388|ref|YP_003375099.1| ATP-dependent clp protease proteolytic subunit protein [Xanthomonas
albilineans GPE PC73]
gi|283472606|emb|CBA15111.1| probable atp-dependent clp protease proteolytic subunit protein
[Xanthomonas albilineans]
Length = 208
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 166/201 (82%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D+ L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA ++ AQLLFLEA+
Sbjct: 2 DNVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLEAD 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+ISLYINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+A
Sbjct: 62 NPEKDISLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNE+ K+ G++ E + + +RD+
Sbjct: 122 LPNSRVMIHQPLGGFQGQATDIDIHAREILTLRARLNEVLAKHTGQSLETIARDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA +A +G+VD+VL R D
Sbjct: 182 KSAIDAQAYGLVDQVLERRPD 202
>gi|253996690|ref|YP_003048754.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
mobilis JLW8]
gi|253983369|gb|ACT48227.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
mobilis JLW8]
Length = 214
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 120/209 (57%), Positives = 165/209 (78%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A+ + LG +PMV+EQ+ RGERS+DIYSRLLKER++F+ G + D A L+ A
Sbjct: 4 HLQPQAQSELITTGLGYIPMVIEQSGRGERSFDIYSRLLKERVIFLVGPVNDMSANLVVA 63
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLEAENP K+ISLYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+ LL+A
Sbjct: 64 QLLFLEAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGAFLLAA 123
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G K R++LPN+RI++HQPSGGF GQ+SDIE HA++I+ ++ +LN+I + G+T EE++
Sbjct: 124 GAKDKRYSLPNSRIMIHQPSGGFQGQSSDIEIHAKEILYLRAKLNDILAHHTGRTAEEID 183
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRID 210
+ +RD+ MSA ++ +G++DKV+ SR +
Sbjct: 184 RDTERDNFMSAEQSVAYGLIDKVIGSRNE 212
>gi|78485521|ref|YP_391446.1| ATP-dependent Clp protease proteolytic subunit [Thiomicrospira
crunogena XCL-2]
gi|110816468|sp|Q31GF1|CLPP_THICR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78363807|gb|ABB41772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiomicrospira
crunogena XCL-2]
Length = 200
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 131/192 (68%), Positives = 162/192 (84%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQT+RGERS+DIYSRLLKER++F+ GQ+EDHMA LI AQLLFLE+ENP K+I
Sbjct: 9 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLVGQVEDHMANLIVAQLLFLESENPDKDIH 68
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTM+FIKP +ST C+GQAASMGS LLSAG +G R+ALPN+R++
Sbjct: 69 LYINSPGGSVTAGMAIYDTMRFIKPDVSTMCIGQAASMGSFLLSAGAEGKRYALPNSRVM 128
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I++IK++LN+ + G+ E +E DRD+ MSA EAC
Sbjct: 129 IHQPLGGFQGQASDIEIHAKEIIQIKQKLNKALADHTGQPIEVIENDTDRDNFMSADEAC 188
Query: 197 DWGVVDKVLMSR 208
D+G+VDKVL R
Sbjct: 189 DYGLVDKVLTRR 200
>gi|167038050|ref|YP_001665628.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
pseudethanolicus ATCC 33223]
gi|167040915|ref|YP_001663900.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
sp. X514]
gi|256752437|ref|ZP_05493296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300914951|ref|ZP_07132267.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307723815|ref|YP_003903566.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|320116459|ref|YP_004186618.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226706551|sp|B0KBA4|CLPP_THEP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706552|sp|B0K533|CLPP_THEPX RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166855155|gb|ABY93564.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X514]
gi|166856884|gb|ABY95292.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256748706|gb|EEU61751.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter ethanolicus CCSD1]
gi|300889886|gb|EFK85032.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X561]
gi|307580876|gb|ADN54275.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter sp. X513]
gi|319929550|gb|ADV80235.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 195
Score = 240 bits (612), Expect = 1e-61, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RIVF+ +I D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIFSRLLKDRIVFLGEEINDTTASLVIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG AIYDTMQ+IKP + T C+G AASM + LL+AG KG RFALPN+ I
Sbjct: 61 WLYINSPGGSITAGFAIYDTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K++ +L++I +N G+ E+++ +RD M A +A
Sbjct: 121 MIHQPLGGMQGQATDIKIHAERILKLRDKLDKILAENTGQPIEKIKADTERDFFMDAEDA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+VL+
Sbjct: 181 KAYGIIDEVLIRNK 194
>gi|255565556|ref|XP_002523768.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223536980|gb|EEF38617.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 296
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 153/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E ++RGER+YDI+SRLLKERIV + G I D A ++ AQLLFLE+ENP K I
Sbjct: 86 GLVPMVIEHSSRGERAYDIFSRLLKERIVCINGPINDDTAHVVVAQLLFLESENPSKPIH 145
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ PI+T C+GQAASM SLLL+AG KG R +LPNA I+
Sbjct: 146 MYLNSPGGQVTAGLAIYDTMQYIRSPINTICLGQAASMASLLLAAGAKGERKSLPNATIM 205
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA D+ H + IV++ LN++Y K+ G++ + ++K +DRD+ M+ EA
Sbjct: 206 IHQPSGGYSGQAKDMTIHTKQIVRVWDSLNQLYSKHTGQSVDVIQKNMDRDYFMTPEEAK 265
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 266 EFGIIDEVIDQRP 278
>gi|160878535|ref|YP_001557503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
gi|160427201|gb|ABX40764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
phytofermentans ISDg]
Length = 193
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 154/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVTDVSASVIVAQLLFLEAEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTM +IK +ST C+G AASMG+ LL+ G KG RFALPNA +
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ A++I+KIK++LN I +N GK E VE +RD+ MSA EA
Sbjct: 121 MIHQPSGGAKGQATDIQIVAENILKIKKKLNTILSENTGKPLEVVEVDTERDYYMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D V+ SR
Sbjct: 181 KNYGIIDSVIASR 193
>gi|220927143|ref|YP_002502445.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
nodulans ORS 2060]
gi|254763797|sp|B8IN26|CLPP_METNO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219951750|gb|ACL62142.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
Length = 209
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 132/204 (64%), Positives = 172/204 (84%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + + LVPMVVEQ++RGER++DIYSRLL+ERI+F+TG +ED+ A+LI AQLLFL
Sbjct: 1 MRDPVEFYNSALVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDYSASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+GQAASMGSLLL+AGE G
Sbjct: 61 EAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVATLCVGQAASMGSLLLAAGEPGH 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQA+DI HA++I +KRRLNEIYVK+ G+ Y+ +E L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQATDILIHAREIEALKRRLNEIYVKHTGRDYDTIELGLER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A A +WG++D+VL R +
Sbjct: 181 DNFMTADAAREWGLIDEVLQKRAE 204
>gi|302878843|ref|YP_003847407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
gi|302581632|gb|ADL55643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gallionella
capsiferriformans ES-2]
Length = 202
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 123/199 (61%), Positives = 163/199 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ E +G++PMVVE + RGER+YDIYSRLLKER+VF+ G++ DH A LI AQ+LFLE+E
Sbjct: 3 NLEPQNIGMIPMVVETSGRGERAYDIYSRLLKERVVFLVGEVNDHSANLIVAQMLFLESE 62
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I YINSPGG VTAGMAIYDTMQFIKP +ST C+GQAASMG+ LL+AGEKG RFA
Sbjct: 63 NPDKDIHFYINSPGGSVTAGMAIYDTMQFIKPAVSTLCIGQAASMGAFLLTAGEKGKRFA 122
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQASDIE HA++I+ +K++LN++ + G+T E +E+ DRD+
Sbjct: 123 LPNSRVMIHQPLGGFRGQASDIEIHAREILYLKQKLNQMLADHTGQTVEAIERDTDRDNF 182
Query: 190 MSASEACDWGVVDKVLMSR 208
+SA++A +G+VD+VL R
Sbjct: 183 LSAADAVAYGLVDQVLEKR 201
>gi|194098886|ref|YP_002001950.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae NCCP11945]
gi|193934176|gb|ACF30000.1| putative endopeptidase [Neisseria gonorrhoeae NCCP11945]
gi|317164458|gb|ADV07999.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae TCDC-NG08107]
Length = 209
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 122/208 (58%), Positives = 157/208 (75%), Gaps = 2/208 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFL
Sbjct: 1 MKGDEMSFDNHLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG
Sbjct: 61 ESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
RFALPN+RI++HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+
Sbjct: 121 RFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ MSA EA ++G++D+VL +R +
Sbjct: 181 DRDNFMSAEEAKEYGLIDQVLENRASLR 208
>gi|332172903|gb|AEE22157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Glaciecola
agarilytica 4H-3-7+YE-5]
Length = 212
Score = 239 bits (611), Expect = 1e-61, Method: Composition-based stats.
Identities = 127/209 (60%), Positives = 160/209 (76%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVPMVVEQT +GERSYDIYSRLLKE ++F+ GQ+EDHMA LI AQ+LFL
Sbjct: 1 MMNTPFDPTNALVPMVVEQTAKGERSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+I LYINSPGG VTAGMAIYDTM FIKP +ST C+GQAASMG+ LLS G KG
Sbjct: 61 EAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGTKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPNAR+++HQP GGF GQASD E HA++I+ IK ++N + ++ G+ YE+V + DR
Sbjct: 121 RYCLPNARVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAEHTGQDYEKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ +SA E+ D+G+VD+VL +R D
Sbjct: 181 DNFLSAQESVDYGLVDQVLANRPDASSSD 209
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
Length = 229
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 110/213 (51%), Positives = 154/213 (72%), Gaps = 4/213 (1%)
Query: 4 EGCAKKDSEDVFL---GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ K +++ +VPMVVEQ+ GER++DIYSRLL+ERIVF+ ++D +A I
Sbjct: 9 HTISSKRPSEIYATAKNVVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIV 68
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL+AE+P+K+I LYINSPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS
Sbjct: 69 AQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLS 128
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R ALP++RI++HQP GG GQA +IE A++I+ IK+RLN++ ++ G+ E +
Sbjct: 129 GGAKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAKEILYIKKRLNDMLAEHTGQPLETI 188
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+RD MSA EA D+G++D+V+ SR D+ +
Sbjct: 189 AADTERDFFMSAQEAVDYGLIDQVI-SRPDLSD 220
>gi|291563765|emb|CBL42581.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SS3/4]
Length = 193
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 107/191 (56%), Positives = 148/191 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVLESTSRGERSYDIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTM +IK + T C+G AASMG+ LLS+G KG RFALPNA +
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMNYIKCDVCTTCIGMAASMGAFLLSSGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I+K K +LN+I N G+ + + + +RD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIKIVAEQILKTKEKLNKILAANTGQPLDVIARDTERDNYMTAEEA 180
Query: 196 CDWGVVDKVLM 206
+G++D+V+
Sbjct: 181 AAYGLIDRVIS 191
>gi|238919011|ref|YP_002932525.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
gi|259585951|sp|C5BCJ6|CLPP_EDWI9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238868579|gb|ACR68290.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Edwardsiella ictaluri 93-146]
Length = 206
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 130/209 (62%), Positives = 165/209 (78%), Gaps = 3/209 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ + + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSDQRELAP---HMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIV 57
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+
Sbjct: 58 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLA 117
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G RF LPN+R+++HQP GGF GQA+DIE HA++I+ IK R+N + K+ G+ E +
Sbjct: 118 AGAQGKRFCLPNSRVMIHQPLGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPIEVI 177
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD MSA +A ++G+VD VL R
Sbjct: 178 ERDTERDRFMSAQDAVEYGLVDAVLTQRA 206
>gi|28211967|ref|NP_782911.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani
E88]
gi|28204410|gb|AAO36848.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani
E88]
Length = 202
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 118/202 (58%), Positives = 158/202 (78%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E+ F+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ Q+ D A+LI AQLLFLE
Sbjct: 1 MNYKEEKFMSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE+P K+I LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R
Sbjct: 61 AEDPDKDIFLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+ I++HQP GGF GQA+DI HA I+KIK+ LN I + G+ E +++ +RD
Sbjct: 121 FALPNSEIMIHQPLGGFQGQATDIGIHADRILKIKQNLNSILSEKTGQPLEVIQRDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ M A++A D+G++D+V++ +
Sbjct: 181 NFMDANQAKDYGLIDEVMVKKK 202
>gi|218779308|ref|YP_002430626.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
gi|259585946|sp|B8FA62|CLPP_DESAA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218760692|gb|ACL03158.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfatibacillum alkenivorans AK-01]
Length = 201
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 159/201 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT+RGER+YDIYSRLLK+RI+F+ ++ D +A I AQLLFLE+++P+K+I
Sbjct: 1 MSYIPYVVEQTSRGERTYDIYSRLLKDRIIFLGTEVNDVVANSIIAQLLFLESDDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG VTAGMAIYDTM +IKP I+T C+GQAASMG++LL+AG G R++LPNARI
Sbjct: 61 NFYINSPGGSVTAGMAIYDTMAYIKPEITTVCIGQAASMGAVLLAAGNHGKRYSLPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQASDI AQ+I+++K LNEI + GK ++V++ DRD+ MS EA
Sbjct: 121 LIHQPMGGFQGQASDIAIQAQEILRMKEALNEILASHTGKPLKQVQQDTDRDYFMSPLEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++D V+++R D++ +
Sbjct: 181 KEYGLIDHVILNREDLDSIEE 201
>gi|90021255|ref|YP_527082.1| ATP-dependent Clp protease proteolytic subunit [Saccharophagus
degradans 2-40]
gi|116243165|sp|Q21KA9|CLPP_SACD2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|89950855|gb|ABD80870.1| ATP-dependent Clp protease proteolytic subunit ClpP [Saccharophagus
degradans 2-40]
Length = 212
Score = 239 bits (611), Expect = 2e-61, Method: Composition-based stats.
Identities = 126/193 (65%), Positives = 155/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMVVEQT RGERSYDIYSRLLKER++F+ GQ+EDHMA L+ AQ+LFLEAENP K+I
Sbjct: 16 NTLVPMVVEQTARGERSYDIYSRLLKERVIFLVGQVEDHMANLVVAQMLFLEAENPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG++IYDTMQFIKP +ST C+GQA SMG+ LL+AG KG RF LPNAR
Sbjct: 76 HLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQACSMGAFLLTAGAKGKRFCLPNART 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI AQ+I+K++ RLNEI + G+ EE+ + +RD MSA E+
Sbjct: 136 MIHQPSGGAQGQASDIHIQAQEILKLRERLNEIMAGHTGRGVEEIARDTERDRFMSAHES 195
Query: 196 CDWGVVDKVLMSR 208
++G++DKVL R
Sbjct: 196 VEYGLIDKVLERR 208
>gi|163851839|ref|YP_001639882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens PA1]
gi|218530631|ref|YP_002421447.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
chloromethanicum CM4]
gi|240139003|ref|YP_002963478.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens AM1]
gi|254561598|ref|YP_003068693.1| ATP-dependent Clp protease proteolytic subunit [Methylobacterium
extorquens DM4]
gi|226706461|sp|A9W5F5|CLPP_METEP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763796|sp|B7KNT0|CLPP_METC4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|163663444|gb|ABY30811.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium extorquens PA1]
gi|218522934|gb|ACK83519.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Methylobacterium chloromethanicum CM4]
gi|240008975|gb|ACS40201.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens AM1]
gi|254268876|emb|CAX24837.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Methylobacterium extorquens DM4]
Length = 208
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 131/204 (64%), Positives = 170/204 (83%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D F LVPMVVEQ++RGER++DIYSRLL+ERI+F+TG +ED A+LI AQLLFL
Sbjct: 1 MRDPVDYFHNSLVPMVVEQSSRGERAFDIYSRLLRERIIFLTGPVEDQGASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+GQAASMGSLLL+AGE G
Sbjct: 61 EAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVGQAASMGSLLLAAGEAGH 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQA+DI HA++I +K+RLNEIYVK+ G+ YE + + L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQATDILIHAREIEALKKRLNEIYVKHTGREYETIHQALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A A ++G++D +L R +
Sbjct: 181 DNFMTADAAKEFGLIDDILHKRPE 204
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 109/196 (55%), Positives = 158/196 (80%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVE ++RGER+YDIYSRLLKERI+F+ G I+D++A ++ AQ+LFLE+E+P K+I LYIN
Sbjct: 1 MVVENSSRGERAYDIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS+LL+AG KG R+ALP+ARI++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQ++DI+ A++I++++ NEI ++ G+ +++ +RD+ MSA EA +G+
Sbjct: 121 LGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGL 180
Query: 201 VDKVLMSRIDIEEKSK 216
+D+V++ ++SK
Sbjct: 181 IDEVVVRPPAASKESK 196
>gi|260432980|ref|ZP_05786951.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
gi|260416808|gb|EEX10067.1| Clp protease [Silicibacter lacuscaerulensis ITI-1157]
Length = 210
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 132/207 (63%), Positives = 165/207 (79%), Gaps = 1/207 (0%)
Query: 10 DSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D D ++ LVPMVVEQT+RGER+YDI+SRLLKERIVF+ G I D M+ LI AQLL LEA
Sbjct: 3 DPVDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIVFINGPIHDGMSHLIVAQLLHLEA 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP+KEIS+YINSPGGVVT+G+AIYDTMQ+IKP ST +GQAASMGS+LL+ GEKGMRF
Sbjct: 63 ENPKKEISIYINSPGGVVTSGLAIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRF 122
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPN+RI++HQPSGG+ GQASDI HA + K+K RL +IY K+ G++ + +EK LDRD+
Sbjct: 123 ALPNSRIMVHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYAKHTGQSKKTIEKALDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
MS EA +WG +D+++ SR E
Sbjct: 183 FMSPEEAKEWGHIDEIVESRTKAEPDE 209
>gi|308271899|emb|CBX28507.1| ATP-dependent Clp protease proteolytic subunit [uncultured
Desulfobacterium sp.]
Length = 206
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 160/201 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMV+EQ++RGER+YDIYSRLLK+RI+F+ + D +A L+ AQLLFLE+E+P K+I
Sbjct: 1 MPLIPMVIEQSSRGERAYDIYSRLLKDRIIFLGTAMNDEVANLLIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGGVVT+G+A+YDTMQ+IK I+T C+GQAASMG+LLL+AG KG R+ALPNARI
Sbjct: 61 NFYINSPGGVVTSGLAVYDTMQYIKSDIATVCIGQAASMGALLLTAGAKGKRYALPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQASDI A++I+++K LN+I + GK ++++ DRD+ MS EA
Sbjct: 121 LIHQPMGGFQGQASDIAIQAREILRMKDTLNDILTFHTGKDLKQIQVDTDRDYFMSGKEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++D V+ +R D++ K
Sbjct: 181 EEYGLIDHVITNRNDLDNIEK 201
>gi|312961789|ref|ZP_07776287.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
gi|311284048|gb|EFQ62631.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens WH6]
Length = 211
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG +G R+ LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRYCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAAR 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 198 EYGLIDAVIEKRP 210
>gi|116243153|sp|Q1Q8J2|CLPP_PSYCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 215
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 121/200 (60%), Positives = 160/200 (80%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ LVPMVVEQ+ RGERS+DI+SRLL+ER++F+TGQ+EDHMA LI AQLLFLEAE
Sbjct: 13 NQSATQAALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAE 72
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I LYINSPGG V+AG+AI+DTM FIKP +ST CMG A SMGS LL+AGEKG R+A
Sbjct: 73 NPDKDIHLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYA 132
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
L NAR+++HQPSGG GQA+DIE +A++I+K + RLNEI + G+ +++EK ++RD+
Sbjct: 133 LANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYW 192
Query: 190 MSASEACDWGVVDKVLMSRI 209
+ A EA ++G++D+VL R
Sbjct: 193 LDAKEAKEYGLIDEVLERRP 212
>gi|325264756|ref|ZP_08131485.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
gi|324030048|gb|EGB91334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. D5]
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A++I AQLLFLEA++P K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VT+G+AIYDTMQ+IK +ST C+G AASMG+ LLS G+KG RFALPNA I
Sbjct: 61 QLYINSPGGSVTSGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I A+ I+KI+ +LN+I +N G++ + ++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIHIVAEHILKIRHKLNQILAENTGQSLDVIKVDTERDNYMSALEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+ S
Sbjct: 181 KEYGLIDEVIAS 192
>gi|296284617|ref|ZP_06862615.1| ATP-dependent Clp protease proteolytic subunit [Citromicrobium
bathyomarinum JL354]
Length = 228
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 127/194 (65%), Positives = 160/194 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+VVEQT+RGERS+DI+SRLL+ERIVF+TG +ED MA+L AQLLFLE+ENP K IS
Sbjct: 16 ALVPVVVEQTSRGERSFDIFSRLLRERIVFLTGPVEDGMASLAVAQLLFLESENPSKPIS 75
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAGMAI+DTMQ+I+P IST C+GQAASMGS LL+AGE GMR ALPNARI+
Sbjct: 76 MYINSPGGVVTAGMAIHDTMQYIQPRISTVCVGQAASMGSFLLAAGEPGMRIALPNARIM 135
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASDIE A++I++I++ +NE+Y K G+ E++E+ +DRD + A EA
Sbjct: 136 IHQPSGGAQGMASDIEIQAREILRIRKNMNELYAKYTGQPLEKIEEAMDRDTFLDAQEAM 195
Query: 197 DWGVVDKVLMSRID 210
+G+VDKV SR
Sbjct: 196 KFGLVDKVFESRPQ 209
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 150/195 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMV+EQTNRGERSYDIYSRLLK+RI+F+ I D +A + AQ+LFLE+E+P K+I
Sbjct: 1 MNLIPMVIEQTNRGERSYDIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V AG+AIYDTMQ+I+ +ST C+G AASMG++LL+AG +G RF LPN+RI
Sbjct: 61 HLYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQP GG GQA+D+E HA++I+K K RLN+I + G+ E++ K DRD MS+ EA
Sbjct: 121 MLHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+GV+D VL +
Sbjct: 181 QKYGVIDDVLKRPPE 195
>gi|298292194|ref|YP_003694133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Starkeya
novella DSM 506]
gi|296928705|gb|ADH89514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Starkeya
novella DSM 506]
Length = 210
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 141/204 (69%), Positives = 174/204 (85%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D ++ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +ED+MATL+ AQLLFL
Sbjct: 1 MRDPIDTYMNYLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGPVEDNMATLMVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+KEIS+YINSPGGVVT+G+AIYDTMQFIKP +ST C+GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPKKEISMYINSPGGVVTSGLAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQ +DI HAQ+I+ +K+RLNEIYVK+ G+ + VE L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQVTDIMLHAQEILSLKKRLNEIYVKHTGQDLKAVEDALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M++ A +G++D V+ R D
Sbjct: 181 DNFMTSDNAKSFGLIDNVIDKRPD 204
>gi|197123826|ref|YP_002135777.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
gi|226706439|sp|B4UAX9|CLPP_ANASK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|196173675|gb|ACG74648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. K]
Length = 203
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Query: 16 LGLVPM--VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ +PM VVEQT+RGERSYDIYSRLLK+RI+F+ ++D +A +I AQLLFLE+E+P K
Sbjct: 1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+LYINSPGG VT+G+AIYDTMQ++KP +ST C+GQAASMG+ LL+ G G RFA+PNA
Sbjct: 61 DINLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNA 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQ SGGF GQA+DIE A++ +++K +LNEI ++ + E +E+ +RD+ MSA
Sbjct: 121 RIMIHQLSGGFQGQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAG 180
Query: 194 EACDWGVVDKVLMSRIDIEEKSK 216
EA ++G++D V + + E+K +
Sbjct: 181 EAKEYGLIDDVFLHKKAAEKKPQ 203
>gi|297538721|ref|YP_003674490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
sp. 301]
gi|297258068|gb|ADI29913.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylotenera
sp. 301]
Length = 219
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 122/204 (59%), Positives = 165/204 (80%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
A+ D LG +PMVVEQ+ RGERSYDIYSRLLKER++F+ G + D A L+ AQLLFL
Sbjct: 14 AELDISPQGLGYIPMVVEQSGRGERSYDIYSRLLKERVIFLVGPVNDMSANLVVAQLLFL 73
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP K+ISLYINSPGG VTAGM+IYDTMQFIK +ST C+GQAASMG+ LL+AG KG
Sbjct: 74 EAENPDKDISLYINSPGGSVTAGMSIYDTMQFIKADVSTLCIGQAASMGAFLLAAGAKGK 133
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPSGGF GQ++DIE HA++I+ ++ +LN+I + GKT E+++ +R
Sbjct: 134 RFSLPNSRVMIHQPSGGFQGQSTDIEIHAKEILYLRAKLNDILAHHTGKTAAEIDRDTER 193
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ MSA+++ ++G++DKV+ SR +
Sbjct: 194 DNFMSATQSVEYGMIDKVIESRTE 217
>gi|225568849|ref|ZP_03777874.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
gi|225162348|gb|EEG74967.1| hypothetical protein CLOHYLEM_04928 [Clostridium hylemonae DSM
15053]
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+IK I T C+G AASMGS LL+ G KG R ALPNA I
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIKSDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I+K ++RLN+I +N G+ + + +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRQRLNQILAENTGQPLDVIRIDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D+V+ +R
Sbjct: 181 KAYGLIDEVIKNR 193
>gi|93278470|pdb|1YG8|A Chain A, The Structure Of A V6a Variant Of Clpp.
gi|93278471|pdb|1YG8|B Chain B, The Structure Of A V6a Variant Of Clpp.
gi|93278472|pdb|1YG8|C Chain C, The Structure Of A V6a Variant Of Clpp.
gi|93278473|pdb|1YG8|D Chain D, The Structure Of A V6a Variant Of Clpp.
gi|93278474|pdb|1YG8|E Chain E, The Structure Of A V6a Variant Of Clpp.
gi|93278475|pdb|1YG8|F Chain F, The Structure Of A V6a Variant Of Clpp.
gi|93278476|pdb|1YG8|G Chain G, The Structure Of A V6a Variant Of Clpp.
gi|93278477|pdb|1YG8|H Chain H, The Structure Of A V6a Variant Of Clpp.
gi|93278478|pdb|1YG8|I Chain I, The Structure Of A V6a Variant Of Clpp.
gi|93278479|pdb|1YG8|J Chain J, The Structure Of A V6a Variant Of Clpp.
gi|93278480|pdb|1YG8|K Chain K, The Structure Of A V6a Variant Of Clpp.
gi|93278481|pdb|1YG8|L Chain L, The Structure Of A V6a Variant Of Clpp.
gi|93278482|pdb|1YG8|M Chain M, The Structure Of A V6a Variant Of Clpp.
gi|93278483|pdb|1YG8|N Chain N, The Structure Of A V6a Variant Of Clpp.
gi|93278484|pdb|1YG8|O Chain O, The Structure Of A V6a Variant Of Clpp.
gi|93278485|pdb|1YG8|P Chain P, The Structure Of A V6a Variant Of Clpp.
gi|93278486|pdb|1YG8|Q Chain Q, The Structure Of A V6a Variant Of Clpp.
gi|93278487|pdb|1YG8|R Chain R, The Structure Of A V6a Variant Of Clpp.
gi|93278488|pdb|1YG8|S Chain S, The Structure Of A V6a Variant Of Clpp.
gi|93278489|pdb|1YG8|T Chain T, The Structure Of A V6a Variant Of Clpp.
gi|93278490|pdb|1YG8|U Chain U, The Structure Of A V6a Variant Of Clpp.
gi|93278491|pdb|1YG8|V Chain V, The Structure Of A V6a Variant Of Clpp.
gi|93278492|pdb|1YG8|W Chain W, The Structure Of A V6a Variant Of Clpp.
gi|93278493|pdb|1YG8|X Chain X, The Structure Of A V6a Variant Of Clpp.
gi|93278494|pdb|1YG8|Y Chain Y, The Structure Of A V6a Variant Of Clpp.
gi|93278495|pdb|1YG8|Z Chain Z, The Structure Of A V6a Variant Of Clpp.
gi|93278496|pdb|1YG8|AA Chain a, The Structure Of A V6a Variant Of Clpp.
gi|93278497|pdb|1YG8|BB Chain b, The Structure Of A V6a Variant Of Clpp
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 163/193 (84%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L PMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 ALAPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 60
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R++
Sbjct: 61 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++E+ +RD +SA EA
Sbjct: 121 IHQPLGGYQGQATDIEIHAREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 180
Query: 197 DWGVVDKVLMSRI 209
++G+VD +L R
Sbjct: 181 EYGLVDSILTHRN 193
>gi|56416580|ref|YP_153654.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. St. Maries]
gi|222474947|ref|YP_002563362.1| ATP-dependent clp protease proteolytic subunit (clpP) [Anaplasma
marginale str. Florida]
gi|67460191|sp|Q5PBD0|CLPP_ANAMM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763783|sp|B9KHZ4|CLPP_ANAMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56387812|gb|AAV86399.1| ATP-dependent clp protease proteolytic subunit [Anaplasma marginale
str. St. Maries]
gi|222419083|gb|ACM49106.1| ATP-dependent clp protease proteolytic subunit (clpP) [Anaplasma
marginale str. Florida]
Length = 215
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 138/197 (70%), Positives = 176/197 (89%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG +ED+MA+LI AQL+FLEAENP
Sbjct: 14 EREIMNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENP 73
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMG+LLL+ GE GMR+ALP
Sbjct: 74 EKDISLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALP 133
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGGF GQA+DIE HA++I++IKRRLNEIYVK+ GK+ EE+E +++RD+ M
Sbjct: 134 NSRIMVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMV 193
Query: 192 ASEACDWGVVDKVLMSR 208
A +A D+G+VDKV+ R
Sbjct: 194 AEKAKDFGIVDKVIDKR 210
>gi|254670503|emb|CBA06249.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha153]
Length = 209
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 122/208 (58%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFL
Sbjct: 1 MKGDEMSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG
Sbjct: 61 ESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
RFALPN+RI++HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+
Sbjct: 121 RFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ MSA EA ++G++D+VL +R ++
Sbjct: 181 DRDNFMSAEEAKEYGLIDQVLENRASLQ 208
>gi|329894939|ref|ZP_08270738.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
gi|328922668|gb|EGG30003.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC3088]
Length = 200
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 160/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGL+PMVVEQT+RGERSYDIYSRLLKER++FV GQ+EDHMA LI AQLLFLE+ENP K+I
Sbjct: 7 LGLIPMVVEQTSRGERSYDIYSRLLKERVIFVVGQVEDHMANLIVAQLLFLESENPDKDI 66
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTM+FIKP ++T CMGQAASMG+ LLSAG KG R+ LPNAR
Sbjct: 67 HLYINSPGGSVTAGLAIYDTMKFIKPDVTTTCMGQAASMGAFLLSAGAKGKRYCLPNART 126
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ A++I+ I+ RLN + ++ G+ + +E+ +RD M+A ++
Sbjct: 127 MIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPIDVIERDTERDRFMNAEQS 186
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+V+ SR
Sbjct: 187 KEYGLVDEVVSSRT 200
>gi|256556952|gb|ACU83574.1| ATP-dependent Clp protease subunit [uncultured bacterium
HF130_AEPn_2]
Length = 211
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG +G RF LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAAR 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 198 EYGLIDAVIDKRP 210
>gi|42784300|ref|NP_981547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10987]
gi|67460499|sp|Q72XW9|CLPP2_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|42740231|gb|AAS44155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 152/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|301598440|pdb|3HLN|A Chain A, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598441|pdb|3HLN|B Chain B, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598442|pdb|3HLN|C Chain C, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598443|pdb|3HLN|D Chain D, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598444|pdb|3HLN|E Chain E, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598445|pdb|3HLN|F Chain F, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598446|pdb|3HLN|G Chain G, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598447|pdb|3HLN|H Chain H, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598448|pdb|3HLN|I Chain I, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598449|pdb|3HLN|J Chain J, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598450|pdb|3HLN|K Chain K, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598451|pdb|3HLN|L Chain L, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598452|pdb|3HLN|M Chain M, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598453|pdb|3HLN|N Chain N, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598454|pdb|3HLN|O Chain O, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598455|pdb|3HLN|P Chain P, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598456|pdb|3HLN|Q Chain Q, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598457|pdb|3HLN|R Chain R, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598458|pdb|3HLN|S Chain S, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598459|pdb|3HLN|T Chain T, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598460|pdb|3HLN|U Chain U, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598461|pdb|3HLN|V Chain V, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598462|pdb|3HLN|W Chain W, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598463|pdb|3HLN|X Chain X, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598464|pdb|3HLN|Y Chain Y, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598465|pdb|3HLN|Z Chain Z, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598466|pdb|3HLN|1 Chain 1, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
gi|301598467|pdb|3HLN|2 Chain 2, Crystal Structure Of Clpp A153c Mutant With Inter-Heptamer
Disulfide Bonds
Length = 193
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 163/193 (84%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I
Sbjct: 1 ALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIY 60
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+AG KG RF LPN+R++
Sbjct: 61 LYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRVM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQA+DIE H ++I+K+K R+NE+ + G++ E++E+ +RD +SA EA
Sbjct: 121 IHQPLGGYQGQATDIEIHCREILKVKGRMNELMALHTGQSLEQIERDTERDRFLSAPEAV 180
Query: 197 DWGVVDKVLMSRI 209
++G+VD +L R
Sbjct: 181 EYGLVDSILTHRN 193
>gi|242279532|ref|YP_002991661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
gi|242122426|gb|ACS80122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
Length = 202
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 167/201 (83%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
G +P+VVE T R ER+YDIYSRLLK+RI+ ++G++ DH+A++ICAQLLFLE+E+P+KE
Sbjct: 1 MSGTIPIVVETTGRTERAYDIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGGVVTAGMAIYDTMQ+I P++T CMGQAASMG+ LLSAGEKG R++LP++R
Sbjct: 61 IYMYINSPGGVVTAGMAIYDTMQYISAPVATLCMGQAASMGAFLLSAGEKGQRYSLPHSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL+HQP GG GQA+DI+ A++I+++++ LN I +N G+T EE+EK DRD+ MSA E
Sbjct: 121 ILIHQPLGGAQGQATDIDIQAREILRLRKSLNSIMAENTGRTVEEIEKDTDRDNFMSAQE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++DKVL +R +IE K
Sbjct: 181 AVEYGLIDKVLENRGNIESKE 201
>gi|315122830|ref|YP_004063319.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
gi|313496232|gb|ADR52831.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 216
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 179/216 (82%), Positives = 196/216 (90%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M FE A++ D LGLVPMVVEQTNRGERSYDIYSRLLKERIVF+TGQIEDHMA LIC
Sbjct: 1 MIFEEYAREGFNDTSLGLVPMVVEQTNRGERSYDIYSRLLKERIVFITGQIEDHMAALIC 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP+ST C+GQAASMGSLLL+
Sbjct: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPVSTLCIGQAASMGSLLLA 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG+KGMRFALPNARI+LHQPSGGFSGQASDIERHA+DI+KIK RLN IYVK+CG+ YEEV
Sbjct: 121 AGKKGMRFALPNARIMLHQPSGGFSGQASDIERHARDIIKIKHRLNNIYVKHCGRVYEEV 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
E+TLDRD MSA +A WG++DKVLMSR+DIEE K
Sbjct: 181 EQTLDRDCFMSAEDAHAWGLIDKVLMSRVDIEEGGK 216
>gi|117620419|ref|YP_856542.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
gi|117561826|gb|ABK38774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aeromonas
hydrophila subsp. hydrophila ATCC 7966]
Length = 200
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 127/197 (64%), Positives = 156/197 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E L+PMVVEQT +GERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 3 ESPRNALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 62
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++IS+YINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G KG RF LP
Sbjct: 63 DQDISIYINSPGGAVTAGMSIYDTMQFIKPDVSTVCMGQACSMGAFLLAGGAKGKRFCLP 122
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NAR+++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ +E+ DRD+ MS
Sbjct: 123 NARVMIHQPLGGFQGQASDIQIHAQEILKIKNTLNERLAFHTGQDMATIERDTDRDNFMS 182
Query: 192 ASEACDWGVVDKVLMSR 208
A +A +G+VD VL R
Sbjct: 183 AEQAVAYGLVDGVLSRR 199
>gi|21230439|ref|NP_636356.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66769567|ref|YP_244329.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
gi|25008306|sp|Q8PBY6|CLPP_XANCP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81304478|sp|Q4URL4|CLPP_XANC8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21112001|gb|AAM40280.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gi|66574899|gb|AAY50309.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. 8004]
Length = 208
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 123/198 (62%), Positives = 163/198 (82%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA +I AQLLFLEA+NP+
Sbjct: 5 TKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPE 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+IS+YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+ALPN
Sbjct: 65 KDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPN 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + + +RD+ SA
Sbjct: 125 SRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSA 184
Query: 193 SEACDWGVVDKVLMSRID 210
+A +G+VD VL R +
Sbjct: 185 VDAQAYGLVDHVLERRPE 202
>gi|315127189|ref|YP_004069192.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
gi|315015703|gb|ADT69041.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
sp. SM9913]
Length = 205
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 126/196 (64%), Positives = 158/196 (80%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVPMVVEQT +GERS+DIYSRLLKERI+F+TGQ+ED+MA LI AQ+LFLE+ENP+
Sbjct: 7 DPLNALVPMVVEQTAKGERSFDIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPE 66
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGMAIYDTM FIKP +ST C+GQAASMG+ LLS G KG RF LPN
Sbjct: 67 KDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLSGGAKGKRFCLPN 126
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQASD E HA++I+ IK +LN + ++ G+ + V + DRD+ MSA
Sbjct: 127 SRVMIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVVSRDTDRDNFMSA 186
Query: 193 SEACDWGVVDKVLMSR 208
S+A D+G+VD V +R
Sbjct: 187 SQAVDYGIVDSVFTNR 202
>gi|17231175|ref|NP_487723.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75909809|ref|YP_324105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|21759070|sp|Q8YQX8|CLPP2_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17132816|dbj|BAB75382.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|75703534|gb|ABA23210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 232
Score = 239 bits (610), Expect = 2e-61, Method: Composition-based stats.
Identities = 105/191 (54%), Positives = 143/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D +A I AQLLFL+AE+ +K+I
Sbjct: 28 NIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQ 87
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG KG R +LP++RI+
Sbjct: 88 LYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIM 147
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ IK +LN++ + G+ E +E DRD MSA EA
Sbjct: 148 IHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAK 207
Query: 197 DWGVVDKVLMS 207
++G++D+V+
Sbjct: 208 NYGLIDQVISR 218
>gi|329121861|ref|ZP_08250476.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
gi|327467799|gb|EGF13291.1| ATP-dependent Clp protease, protease subunit [Dialister
micraerophilus DSM 19965]
Length = 205
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 115/205 (56%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + VP+VVEQT+ GERSYDIYSRLLK+RI+F+ GQIEDHMA +I AQLLFLEAE+
Sbjct: 2 KEGIIMAYVPIVVEQTSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAED 61
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGGVVTAGMAIYDTMQ+I+P +ST C+G ASM ++LL++G KG RFAL
Sbjct: 62 PDKDIHLYINSPGGVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFAL 121
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++ +++HQP GG GQA++IE HA++I++++ LN I K+ G+ + ++K +RD+ M
Sbjct: 122 PHSNVMIHQPLGGVQGQATEIEIHAREILRLRDELNGILAKHTGQPLDVIKKDTERDNFM 181
Query: 191 SASEACDWGVVDKVLMSRIDIEEKS 215
+A A +G++DK+L R ++ K
Sbjct: 182 TAENALKYGLIDKILT-RNELTAKD 205
>gi|310766842|gb|ADP11792.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia sp.
Ejp617]
Length = 215
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 9 MSYSG--ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 66
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 67 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 126
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+K K+ +NE+ K+ G+T E +
Sbjct: 127 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 186
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASE+ ++G+VD VL R
Sbjct: 187 ERDTNRDRFLSASESVEYGLVDSVLSQRS 215
>gi|229164087|ref|ZP_04292023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228619323|gb|EEK76213.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 153/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 HIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|68249290|ref|YP_248402.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|161350016|ref|NP_438872.3| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae Rd KW20]
gi|260581528|ref|ZP_05849336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
gi|1168977|sp|P43867|CLPP_HAEIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81336285|sp|Q4QMK5|CLPP_HAEI8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1573716|gb|AAC22371.1| ATP-dependent Clp protease, proteolytic subunit (clpP) [Haemophilus
influenzae Rd KW20]
gi|68057489|gb|AAX87742.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 86-028NP]
gi|260091826|gb|EEW75781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
influenzae RdAW]
Length = 193
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LN+ + G+ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQGIERIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 QAYGLVDEVLVKR 193
>gi|293606140|ref|ZP_06688505.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii ATCC 43553]
gi|292815595|gb|EFF74711.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
piechaudii ATCC 43553]
Length = 217
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 117/195 (60%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +PMV+EQ+ RGER+YDIYSRLL+ER++F+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 22 LGYIPMVIEQSGRGERAYDIYSRLLRERLIFLVGPVNDATANLVVAQLLFLESENPDKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AGMAI+DTMQFIKP +ST C G AASMG+ LL+AG+KG RF LPN+RI
Sbjct: 82 SLYINSPGGSVYAGMAIFDTMQFIKPDVSTLCTGLAASMGAFLLAAGKKGKRFTLPNSRI 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQASDI+ A++I+ ++ RLN I N G++ E + +RD+ MSA +A
Sbjct: 142 MIHQPSGGAQGQASDIQIQAREILDLRERLNRILADNTGQSMERIGLDTERDNFMSAEDA 201
Query: 196 CDWGVVDKVLMSRID 210
+G+VDKV+ SR +
Sbjct: 202 VSYGLVDKVMSSRSE 216
>gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + RLN+I + G+ E++EK DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+
Sbjct: 181 KEYGLIDEVMEPEK 194
>gi|59801023|ref|YP_207735.1| putative endopeptidase [Neisseria gonorrhoeae FA 1090]
gi|239999171|ref|ZP_04719095.1| putative endopeptidase [Neisseria gonorrhoeae 35/02]
gi|240013921|ref|ZP_04720834.1| putative endopeptidase [Neisseria gonorrhoeae DGI18]
gi|240016363|ref|ZP_04722903.1| putative endopeptidase [Neisseria gonorrhoeae FA6140]
gi|240080482|ref|ZP_04725025.1| putative endopeptidase [Neisseria gonorrhoeae FA19]
gi|240113150|ref|ZP_04727640.1| putative endopeptidase [Neisseria gonorrhoeae MS11]
gi|240115906|ref|ZP_04729968.1| putative endopeptidase [Neisseria gonorrhoeae PID18]
gi|240118204|ref|ZP_04732266.1| putative endopeptidase [Neisseria gonorrhoeae PID1]
gi|240121490|ref|ZP_04734452.1| putative endopeptidase [Neisseria gonorrhoeae PID24-1]
gi|240123752|ref|ZP_04736708.1| putative endopeptidase [Neisseria gonorrhoeae PID332]
gi|240125943|ref|ZP_04738829.1| putative endopeptidase [Neisseria gonorrhoeae SK-92-679]
gi|240128455|ref|ZP_04741116.1| putative endopeptidase [Neisseria gonorrhoeae SK-93-1035]
gi|254493943|ref|ZP_05107114.1| endopeptidase [Neisseria gonorrhoeae 1291]
gi|260440279|ref|ZP_05794095.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae DGI2]
gi|268595002|ref|ZP_06129169.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae 35/02]
gi|268596618|ref|ZP_06130785.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae FA19]
gi|268599230|ref|ZP_06133397.1| endopeptidase [Neisseria gonorrhoeae MS11]
gi|268601577|ref|ZP_06135744.1| endopeptidase [Neisseria gonorrhoeae PID18]
gi|268603916|ref|ZP_06138083.1| endopeptidase [Neisseria gonorrhoeae PID1]
gi|268682379|ref|ZP_06149241.1| endopeptidase [Neisseria gonorrhoeae PID332]
gi|268684537|ref|ZP_06151399.1| endopeptidase [Neisseria gonorrhoeae SK-92-679]
gi|268686847|ref|ZP_06153709.1| endopeptidase [Neisseria gonorrhoeae SK-93-1035]
gi|291043574|ref|ZP_06569290.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae DGI2]
gi|293398887|ref|ZP_06643052.1| Clp protease [Neisseria gonorrhoeae F62]
gi|67460148|sp|Q5F914|CLPP_NEIG1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|59717918|gb|AAW89323.1| putative endopeptidase [Neisseria gonorrhoeae FA 1090]
gi|226512983|gb|EEH62328.1| endopeptidase [Neisseria gonorrhoeae 1291]
gi|268548391|gb|EEZ43809.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae 35/02]
gi|268550406|gb|EEZ45425.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae FA19]
gi|268583361|gb|EEZ48037.1| endopeptidase [Neisseria gonorrhoeae MS11]
gi|268585708|gb|EEZ50384.1| endopeptidase [Neisseria gonorrhoeae PID18]
gi|268588047|gb|EEZ52723.1| endopeptidase [Neisseria gonorrhoeae PID1]
gi|268622663|gb|EEZ55063.1| endopeptidase [Neisseria gonorrhoeae PID332]
gi|268624821|gb|EEZ57221.1| endopeptidase [Neisseria gonorrhoeae SK-92-679]
gi|268627131|gb|EEZ59531.1| endopeptidase [Neisseria gonorrhoeae SK-93-1035]
gi|291012037|gb|EFE04026.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
gonorrhoeae DGI2]
gi|291610301|gb|EFF39411.1| Clp protease [Neisseria gonorrhoeae F62]
Length = 204
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 155/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R +
Sbjct: 187 KEYGLIDQVLENRASLR 203
>gi|114330232|ref|YP_746454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
eutropha C91]
gi|122314709|sp|Q0AJI2|CLPP_NITEC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114307246|gb|ABI58489.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitrosomonas
eutropha C91]
Length = 214
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 120/202 (59%), Positives = 157/202 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K + LGL+PMV+E + RGER+YDIYSRLL+ERI+F+ G + + A L+ AQLLFLE
Sbjct: 9 KNELNTTGLGLIPMVIESSGRGERAYDIYSRLLRERIIFLVGPVTETSANLVIAQLLFLE 68
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+EN +K+ISLYINSPGG+VTAG+A+YDTMQFIKP +ST C+GQAASMG+LLL+AG KG R
Sbjct: 69 SENSEKDISLYINSPGGLVTAGLAVYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKGKR 128
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ LPN+R+++HQP GGF GQASDIE HA++I+ +K RLNEI K+ +T +EK DRD
Sbjct: 129 YCLPNSRVMIHQPLGGFQGQASDIEIHAKEILALKGRLNEILAKHTSQTIRTIEKDTDRD 188
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ + A A + +VD VL SR
Sbjct: 189 NFLGAEAAVKYSLVDAVLTSRK 210
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 120/194 (61%), Positives = 161/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT RGERSYDIYSRLLK+RIVF+ QI+D ++ +I AQLLFLEAE+P+K+I
Sbjct: 1 MPLVPIVVEQTARGERSYDIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTMQ+I+P +ST C+GQAASMG++LL+AGEKG RFALP++RI
Sbjct: 61 FLYINSPGGVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I++IK LN+I V++ G E++++ DRD M+ +A
Sbjct: 121 MIHQPLGGAQGQATDIEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMTGEQA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+V+ SR
Sbjct: 181 RAYGIIDEVIQSRS 194
>gi|153955960|ref|YP_001396725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
kluyveri DSM 555]
gi|219856302|ref|YP_002473424.1| hypothetical protein CKR_2959 [Clostridium kluyveri NBRC 12016]
gi|189082452|sp|A5N2K8|CLPP_CLOK5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763788|sp|B9E685|CLPP_CLOK1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146348818|gb|EDK35354.1| ClpP [Clostridium kluyveri DSM 555]
gi|219570026|dbj|BAH08010.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 194
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 119/194 (61%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RIV ++ ++ D A+LI AQLLFLEAENP K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIVMLSEEVNDVTASLIVAQLLFLEAENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +TAGMAIYDTMQ+IK +ST C+G AASMG+ LL+AGEKG RFALPN+ I
Sbjct: 61 YFYINSPGGSITAGMAIYDTMQYIKSDVSTICIGMAASMGAFLLAAGEKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA I++IK++LN I + G++ E+VEK +RD+ M+A EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHADRILRIKKKLNAIISERTGQSIEKVEKDTERDNFMTAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V +
Sbjct: 181 KEYGLIDEVFTKKK 194
>gi|218768333|ref|YP_002342845.1| endopeptidase [Neisseria meningitidis Z2491]
gi|18203136|sp|Q9JU33|CLPP_NEIMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121052341|emb|CAM08672.1| endopeptidase [Neisseria meningitidis Z2491]
gi|308389431|gb|ADO31751.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha710]
gi|319410578|emb|CBY90947.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis WUE 2594]
Length = 204
Score = 239 bits (609), Expect = 2e-61, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 187 KEYGLIDQVLENRASLQ 203
>gi|161486690|ref|YP_719644.2| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
129PT]
Length = 193
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 160/193 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F+TG++ED MA LI AQLLFLEAE+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E++E+ DRD+ MSA +A
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 KLYGLVDEVLIKR 193
>gi|223938520|ref|ZP_03630412.1| Endopeptidase Clp [bacterium Ellin514]
gi|223892782|gb|EEF59251.1| Endopeptidase Clp [bacterium Ellin514]
Length = 215
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 114/194 (58%), Positives = 151/194 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVPMVVEQT RGER YDIYSRLL +RIVF+ ++D +A LI AQLLFL+ +P+K+I L
Sbjct: 10 LVPMVVEQTGRGERGYDIYSRLLVDRIVFLGTPVDDMVANLIIAQLLFLQMSDPKKDIHL 69
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTMQF+ ++T+C+GQAASMG++LL G KG R+ALPNA I++
Sbjct: 70 YINSPGGSVTAGLAIYDTMQFLTCDVNTYCIGQAASMGAVLLCGGTKGKRYALPNANIMI 129
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQ GG GQASD+E + ++++K+RLN I K+ GK E+VEK DRD+ M++ EA
Sbjct: 130 HQVLGGAEGQASDVEIRVKYMLRLKQRLNGIISKHTGKPIEQVEKDCDRDNFMTSDEAKA 189
Query: 198 WGVVDKVLMSRIDI 211
+G+VD+V+ SR +I
Sbjct: 190 YGLVDEVVQSRKEI 203
>gi|145635952|ref|ZP_01791637.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|319897851|ref|YP_004136048.1| ATP-dependent clp protease proteolytic subunit [Haemophilus
influenzae F3031]
gi|145266785|gb|EDK06804.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae PittAA]
gi|301169432|emb|CBW29032.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus influenzae 10810]
gi|317433357|emb|CBY81736.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae F3031]
Length = 193
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LN+ + G++ E +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 181 QVYGLVDEVLVKR 193
>gi|208779709|ref|ZP_03247053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
gi|208744164|gb|EDZ90464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
Length = 201
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 116/200 (58%), Positives = 155/200 (77%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVP V+E+T GER++DIYSRLLKERIVF+ G++ DH A L+ AQLLFLE+E+P K
Sbjct: 2 ITNNLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPNK 61
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I YINSPGG+VTAGM +YDTMQFIKP +ST C+G AASMGSLLL+ G KG R++LP++
Sbjct: 62 DIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSS 121
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++HQP GGF GQASDIE HA++I++IK RLN++ + G+ E + K DRD+ M A
Sbjct: 122 QIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMAD 181
Query: 194 EACDWGVVDKVLMSRIDIEE 213
EA +G++D V+ SR I +
Sbjct: 182 EAKAYGLIDHVIESREAIIK 201
>gi|21241838|ref|NP_641420.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58580656|ref|YP_199672.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|78046637|ref|YP_362812.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vesicatoria str. 85-10]
gi|84622589|ref|YP_449961.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|166710928|ref|ZP_02242135.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzicola BLS256]
gi|188578371|ref|YP_001915300.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae PXO99A]
gi|188992776|ref|YP_001904786.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. campestris str. B100]
gi|289664185|ref|ZP_06485766.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. vasculorum NCPPB702]
gi|289668776|ref|ZP_06489851.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
campestris pv. musacearum NCPPB4381]
gi|294666562|ref|ZP_06731803.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325914926|ref|ZP_08177258.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325927441|ref|ZP_08188688.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
gi|25008307|sp|Q8PNI5|CLPP_XANAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460159|sp|Q5H434|CLPP_XANOR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183187|sp|Q3BWQ1|CLPP_XANC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816521|sp|Q2P6Z0|CLPP_XANOM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706557|sp|B0RTF7|CLPP_XANCB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706558|sp|B2SMI3|CLPP_XANOP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21107218|gb|AAM35956.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas
axonopodis pv. citri str. 306]
gi|58425250|gb|AAW74287.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae KACC10331]
gi|78035067|emb|CAJ22712.1| ATP-dependent Clp protease [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|84366529|dbj|BAE67687.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas oryzae
pv. oryzae MAFF 311018]
gi|167734536|emb|CAP52746.1| ATP-dependent Clp protease [Xanthomonas campestris pv. campestris]
gi|188522823|gb|ACD60768.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|292603706|gb|EFF47116.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|325538819|gb|EGD10483.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
vesicatoria ATCC 35937]
gi|325542191|gb|EGD13686.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
perforans 91-118]
Length = 208
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 123/198 (62%), Positives = 164/198 (82%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA +I AQLLFLEA+NP+
Sbjct: 5 TKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPE 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+IS+YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+ALPN
Sbjct: 65 KDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPN 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + + +RD+ SA
Sbjct: 125 SRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSA 184
Query: 193 SEACDWGVVDKVLMSRID 210
+A +G+VD+VL R +
Sbjct: 185 VDAQAYGLVDQVLERRPE 202
>gi|329908483|ref|ZP_08274873.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
gi|327546710|gb|EGF31661.1| ATP-dependent Clp protease proteolytic subunit [Oxalobacteraceae
bacterium IMCC9480]
Length = 206
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 122/198 (61%), Positives = 157/198 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LG++PMV+EQ+ RGERSYDIYSRLLKER++F+ G + D +A LI AQLLFLE+ENP
Sbjct: 9 EPQMLGMIPMVIEQSGRGERSYDIYSRLLKERVIFLVGPVNDGVANLIVAQLLFLESENP 68
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAI+DTMQFIKP +ST C G AASMG+ LL+AG KG RF+LP
Sbjct: 69 DKDISLYINSPGGSVSAGMAIFDTMQFIKPNVSTLCTGLAASMGAFLLAAGAKGKRFSLP 128
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGG GQA+DIE A++I+ ++ RLN I G+T EE+ + +RD+ MS
Sbjct: 129 NSRIMIHQPSGGAQGQATDIEIQAKEILYLRERLNGILADKTGRTIEEIRRDTERDNFMS 188
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G++DKVL +R
Sbjct: 189 ADEAEKYGMIDKVLTTRE 206
>gi|297250503|ref|ZP_06864443.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
polysaccharea ATCC 43768]
gi|296838809|gb|EFH22747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
polysaccharea ATCC 43768]
Length = 209
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 122/208 (58%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFL
Sbjct: 1 MKGDEMSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG
Sbjct: 61 ESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
RFALPN+RI++HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+
Sbjct: 121 RFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ MSA EA ++G++D+VL +R+ ++
Sbjct: 181 DRDNFMSAEEAKEYGLIDQVLENRVSLQ 208
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 111/192 (57%), Positives = 152/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL+AE+P K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE H + I++++ LN I + G+ E++ K DRD+ M+A +A
Sbjct: 121 MIHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKV+ +
Sbjct: 181 REYGLIDKVIET 192
>gi|116747551|ref|YP_844238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
gi|166214718|sp|A0LEF1|CLPP_SYNFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116696615|gb|ABK15803.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobacter fumaroxidans MPOB]
Length = 202
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 112/196 (57%), Positives = 158/196 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQ++RGER++DIYSRLL++RI+F+ I D +A +I AQLLFLE+E+P K+I
Sbjct: 1 MSLIPIVVEQSSRGERAFDIYSRLLRDRIIFLGTAITDEVANVIIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG+VTAG+AIYDTMQFIKP +ST CMGQAASM ++LL+AG KG R+ALP+ RI
Sbjct: 61 HFYINSPGGLVTAGLAIYDTMQFIKPNVSTLCMGQAASMAAILLAAGVKGKRYALPHVRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQP GGF GQA+D+E A++I+K++ LN+I V++ G+ E++++ DRD MS +A
Sbjct: 121 MLHQPMGGFQGQATDVEIQAKEILKLREELNDILVRHTGRPVEQIQRDTDRDFYMSGEQA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G+VD + SR+ I
Sbjct: 181 REYGMVDHIFTSRLSI 196
>gi|261377747|ref|ZP_05982320.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
cinerea ATCC 14685]
gi|269146032|gb|EEZ72450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
cinerea ATCC 14685]
Length = 206
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNHLMAKHCGRDLADLERDTDRDNFMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D++L +R ++
Sbjct: 189 KEYGLIDQILENRASLQ 205
>gi|254673129|emb|CBA07904.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha275]
Length = 209
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFL
Sbjct: 1 MKGDEMSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG
Sbjct: 61 ESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
RFALPN+RI++HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+
Sbjct: 121 RFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ MSA EA ++G++D++L +R ++
Sbjct: 181 DRDNFMSAEEAKEYGLIDQILENRASLQ 208
>gi|55980584|ref|YP_143881.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB8]
gi|60389682|sp|Q72L15|CLPP_THET2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460210|sp|Q5SKM8|CLPP_THET8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|55771997|dbj|BAD70438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus HB8]
Length = 194
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 149/192 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQT RGER YDIYSRLLK+RI+F+ I+ +A ++ AQLLFL+A+NP +EI L
Sbjct: 2 VIPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQF++ P+ST +G AASM +++L+AGEKG R+ALP+A++++
Sbjct: 62 YINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G ASDI AQ+I+K K+ LNEI K+ G+ E+VEK DRD+ +SA EA +
Sbjct: 122 HQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALE 181
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 182 YGLIDQVVTREE 193
>gi|256823172|ref|YP_003147135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kangiella
koreensis DSM 16069]
gi|256796711|gb|ACV27367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kangiella
koreensis DSM 16069]
Length = 205
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 128/204 (62%), Positives = 162/204 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E GL+PMVVEQT+RGERSYDIYSRLLKER++F GQ+ED+MA I AQ+LFL
Sbjct: 1 MSKIIETQASGLIPMVVEQTSRGERSYDIYSRLLKERVIFCVGQVEDYMANSIVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E++NP K+I LYINSPGGVVTAG++IYDTMQFI+P +ST C+GQAASMG+LLL+ G KG
Sbjct: 61 ESDNPDKDIYLYINSPGGVVTAGLSIYDTMQFIRPDVSTVCVGQAASMGALLLTGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPN+R+++HQP GGF GQASDI HAQ+I ++K RLN I +CGKT EEVE+ DR
Sbjct: 121 RHTLPNSRMMIHQPLGGFQGQASDIAIHAQEITELKHRLNSIMAHHCGKTVEEVERDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ ++A EA ++G+VD ++ SR
Sbjct: 181 DNFLTADEAVEYGLVDSIISSRKQ 204
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 116/195 (59%), Positives = 161/195 (82%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP+V+EQT+RGERSYDI+SRLLK+R +F+ G I+DH+A L+ AQ+LFLEAE+P+K+
Sbjct: 1 MSYLVPIVIEQTSRGERSYDIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+TAGMAIYDTMQ+IKP +ST C+GQAASMG+ LL+AG KG RF+LP AR
Sbjct: 61 IHLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DI+ HA++I++++ LNE+ K+ G+ E++E+ +RD MSA+E
Sbjct: 121 IMIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D+V+ R
Sbjct: 181 AKEYGIIDEVITVRK 195
>gi|331005198|ref|ZP_08328592.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC1989]
gi|330420980|gb|EGG95252.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC1989]
Length = 208
Score = 239 bits (609), Expect = 3e-61, Method: Composition-based stats.
Identities = 128/199 (64%), Positives = 159/199 (79%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
E GLVPMVVEQT RGERSYDIYSRLLKER++F+ GQ+EDHMA L+ AQLLFLEAE
Sbjct: 7 SQEVTNSGLVPMVVEQTARGERSYDIYSRLLKERVIFMVGQVEDHMANLVVAQLLFLEAE 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG G RF
Sbjct: 67 NPDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQACSMGAFLLNAGAPGKRFC 126
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNAR ++HQPSGG GQA+DI A++I+KI++RLNEI K+ G+ ++E+ + +RD
Sbjct: 127 LPNARTMIHQPSGGAQGQATDISIQAEEILKIRQRLNEIMAKHSGRDFDEIARDTERDRF 186
Query: 190 MSASEACDWGVVDKVLMSR 208
MSA E+ ++G++D VL SR
Sbjct: 187 MSADESKEYGLIDDVLTSR 205
>gi|167562414|ref|ZP_02355330.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis EO147]
gi|167569597|ref|ZP_02362471.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
oklahomensis C6786]
Length = 207
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 121/209 (57%), Positives = 159/209 (76%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+ + +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+
Sbjct: 1 MASQAP--RDFEAQALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+ISLYINSPGG V+AGMAIYDTMQF+KP +ST CMG AASMG+ LL+
Sbjct: 59 AQLLFLESENPDKDISLYINSPGGSVSAGMAIYDTMQFVKPDVSTLCMGLAASMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G KG R+ALPNAR+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E +
Sbjct: 119 SGAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAQHTGQDVERI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V + R
Sbjct: 179 ARDTDRDNFMSSEDAKAYGLIDHVSIKRP 207
>gi|325662430|ref|ZP_08151036.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331086220|ref|ZP_08335302.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471264|gb|EGC74488.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330406379|gb|EGG85893.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 193
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/190 (59%), Positives = 149/190 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIK +ST C+G AASMG+ LL+ G KG R+ALPNA I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIKCDVSTTCIGMAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ A I+K + +LN+I +N G+ +E +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATDIKIVADHILKTRTKLNKILAENTGQDLSVIEVDTERDNYMSAEEA 180
Query: 196 CDWGVVDKVL 205
+G++D+V+
Sbjct: 181 KAYGLIDEVI 190
>gi|304387382|ref|ZP_07369574.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis ATCC 13091]
gi|304338633|gb|EFM04751.1| ATP-dependent Clp protease proteolytic subunit [Neisseria
meningitidis ATCC 13091]
Length = 209
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 121/208 (58%), Positives = 158/208 (75%), Gaps = 2/208 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFL
Sbjct: 1 MKGDEMSFDNYLVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG
Sbjct: 61 ESENPDKDIFFYINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
RFALPN+RI++HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+
Sbjct: 121 RFALPNSRIMIHQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ MSA EA ++G++D++L +R ++
Sbjct: 181 DRDNFMSAEEAKEYGLIDQILENRASLQ 208
>gi|240146206|ref|ZP_04744807.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis L1-82]
gi|257201662|gb|EEU99946.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis L1-82]
gi|291536689|emb|CBL09801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis M50/1]
gi|291537973|emb|CBL11084.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Roseburia
intestinalis XB6B4]
Length = 193
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGER+YDIYSRLLK+RI+F+ ++ + A+L AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERNYDIYSRLLKDRIIFLGEEVNETTASLTVAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG+VTAG+AIYDTMQ+IK +ST C+G AASMG+ LLS G KG R ALPNA I
Sbjct: 61 QLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLSGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+K K+RLNEI N GK Y+ + +RD+ MSA EA
Sbjct: 121 MIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANTGKPYDVIAADTERDYYMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ +R
Sbjct: 181 KAYGLIDDVITNR 193
>gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
H16]
gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus
taiwanensis LMG 19424]
gi|123033071|sp|Q0KBK4|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706449|sp|B3R4W1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16]
gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Cupriavidus taiwanensis LMG 19424]
Length = 216
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 154/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP K++
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKDV 82
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AG+AIYDTMQFIKP +ST CMG AASMG+ LL+AG KG R ALPN+RI
Sbjct: 83 SLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSRI 142
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ ++ RLN I + G+ E++ + DRD+ MS +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQA 202
Query: 196 CDWGVVDKVLMSR 208
D+G++DKVL R
Sbjct: 203 VDYGLIDKVLARR 215
>gi|209517482|ref|ZP_03266323.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209502136|gb|EEA02151.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 218
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 114/204 (55%), Positives = 152/204 (74%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLF
Sbjct: 1 MPSSYPSVSALGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+I YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL+AG++G
Sbjct: 61 LESENPDKDICFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+D+E A++++ ++ RLN + + G++ EE+ + D
Sbjct: 121 KRYALPNARIMIHQPSGGGQGTAADVEIQAKEVLYVRARLNAMMAERTGRSIEEISRDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD+ MSA EA D+G++D VL +R
Sbjct: 181 RDNFMSALEARDYGLIDDVLEARA 204
>gi|86159772|ref|YP_466557.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|220918591|ref|YP_002493895.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
gi|115311353|sp|Q2IEW1|CLPP_ANADE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763782|sp|B8J5G7|CLPP_ANAD2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85776283|gb|ABC83120.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-C]
gi|219956445|gb|ACL66829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter dehalogenans 2CP-1]
Length = 203
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 111/203 (54%), Positives = 159/203 (78%), Gaps = 2/203 (0%)
Query: 16 LGLVPM--VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ +PM VVEQT+RGERSYDIYSRLLK+RI+F+ ++D +A +I AQLLFLE+E+P K
Sbjct: 1 MPYIPMPYVVEQTHRGERSYDIYSRLLKDRIIFLGTPVDDDVANVIIAQLLFLESEDPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+LYINSPGG VT+G+AIYDTMQ++KP +ST C+GQAASMG+ LL+ G G RFA+PNA
Sbjct: 61 DINLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAVPNA 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQ SGGF GQA+DIE A++ +++K +LNEI ++ + E +E+ +RD+ MSA
Sbjct: 121 RIMIHQLSGGFQGQATDIEIQAKEALRLKAKLNEIMARHTRQPIERIERDTERDYFMSAG 180
Query: 194 EACDWGVVDKVLMSRIDIEEKSK 216
EA ++G++D V + + ++K +
Sbjct: 181 EAKEYGLIDDVFLHKKAADKKPQ 203
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 107/211 (50%), Positives = 153/211 (72%), Gaps = 1/211 (0%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ + +VPMVVEQ+ GER++DIYSRLL+ERI+F+ ++D +A I AQ
Sbjct: 8 YRSPLSTLGGNNIQSVVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQVADSIVAQ 67
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFL+AE+P+K+I LYINSPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS G
Sbjct: 68 LLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 127
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG R ALP++RI++HQP GG GQA +IE A++I+ IK RLN + V++ G+ E++++
Sbjct: 128 CKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAREILYIKDRLNTMLVEHTGQPMEKLQE 187
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+RD MSA EA ++G++D+V+ SR ++ +
Sbjct: 188 DTERDFFMSAEEAKEYGLIDQVI-SRPNLPD 217
>gi|311695076|gb|ADP97949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine
bacterium HP15]
Length = 201
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 115/197 (58%), Positives = 151/197 (76%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
GLVP+V+EQT RGERS+DIYSRLLKER++F+ G +EDHMA LI AQLLFLE+ENP
Sbjct: 1 MVTNSGLVPIVIEQTARGERSFDIYSRLLKERVIFMVGPVEDHMANLIVAQLLFLESENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGM+IYDTMQFIKP ++T C+GQAASMG+ LL+ G G R LP
Sbjct: 61 DKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAAGKRACLP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG+ GQA+DIE H ++I+KI+ LN I + G+ E + K DRD+ M
Sbjct: 121 NSRVMIHQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQDLETIAKDTDRDNFMD 180
Query: 192 ASEACDWGVVDKVLMSR 208
++A ++G++D +L R
Sbjct: 181 PAQAKEYGLIDSILDKR 197
>gi|158321199|ref|YP_001513706.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
oremlandii OhILAs]
gi|167008645|sp|A8MIS8|CLPP_ALKOO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158141398|gb|ABW19710.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
oremlandii OhILAs]
Length = 195
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 116/195 (59%), Positives = 151/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F++ ++ D A+L+ AQLLFLE+E+P K+I
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLSDEVNDATASLVVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTM +IKP +ST C+G AASMG+ LL+AG+KG RFALPNA I
Sbjct: 61 QLYINSPGGSITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLTAGQKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DI H + I+K++ LN+I + G+ E+V+K DRD M A EA
Sbjct: 121 MIHQPLGGTRGQAEDIRIHTERILKMRETLNKIIAERTGQPLEKVQKDTDRDFFMEAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+V+ +
Sbjct: 181 RAYGIIDEVITTAKK 195
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 108/190 (56%), Positives = 149/190 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN+I + G++ E++EK DRD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEA 180
Query: 196 CDWGVVDKVL 205
++G+VD+V+
Sbjct: 181 KEYGLVDQVM 190
>gi|30023185|ref|NP_834816.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47567358|ref|ZP_00238071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49481130|ref|YP_039138.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52140414|ref|YP_086415.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
E33L]
gi|75759660|ref|ZP_00739744.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|118480187|ref|YP_897338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis str. Al Hakam]
gi|190015186|ref|YP_001966706.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015451|ref|YP_001967031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus]
gi|190015619|ref|YP_001967344.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus]
gi|196032944|ref|ZP_03100357.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196039610|ref|ZP_03106915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|196045601|ref|ZP_03112831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|206970378|ref|ZP_03231331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208702014|ref|YP_002267309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217956873|ref|YP_002335967.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|217962631|ref|YP_002341203.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|218231097|ref|YP_002369926.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
B4264]
gi|218848317|ref|YP_002455085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218900271|ref|YP_002448682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|218906323|ref|YP_002454157.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|222098603|ref|YP_002532661.1| ATP-dependent clp protease proteolytic subunit [Bacillus cereus Q1]
gi|225867113|ref|YP_002752491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228903623|ref|ZP_04067744.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228910978|ref|ZP_04074786.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228917753|ref|ZP_04081294.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228923875|ref|ZP_04087152.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228930150|ref|ZP_04093159.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228936434|ref|ZP_04099232.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228942286|ref|ZP_04104825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228948867|ref|ZP_04111142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228955388|ref|ZP_04117393.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228961377|ref|ZP_04122991.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228968242|ref|ZP_04129240.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228975215|ref|ZP_04135773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981853|ref|ZP_04142148.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228988373|ref|ZP_04148465.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229072597|ref|ZP_04205799.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|229082356|ref|ZP_04214819.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229087619|ref|ZP_04219749.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|229094242|ref|ZP_04225321.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|229112558|ref|ZP_04242095.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229124654|ref|ZP_04253836.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229130395|ref|ZP_04259353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|229147676|ref|ZP_04276019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|229153305|ref|ZP_04281483.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|229158714|ref|ZP_04286772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|229164770|ref|ZP_04292604.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|229181405|ref|ZP_04308733.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|229187359|ref|ZP_04314502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|229193390|ref|ZP_04320339.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|254724422|ref|ZP_05186206.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. A1055]
gi|296505568|ref|YP_003667268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|301056609|ref|YP_003794820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
CI]
gi|67460463|sp|Q631K2|CLPP2_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460476|sp|Q6HBD8|CLPP2_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460524|sp|Q815J6|CLPP2_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17981472|gb|AAL51030.1|AF454757_1 ClpP1 [Bacillus thuringiensis]
gi|29898745|gb|AAP12017.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47555979|gb|EAL14317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49332686|gb|AAT63332.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51973883|gb|AAU15433.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus E33L]
gi|74492856|gb|EAO55988.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|116584526|gb|ABK00643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|116584862|gb|ABK00977.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|116585132|gb|ABK01241.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|118419412|gb|ABK87831.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|195994373|gb|EDX58328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196023432|gb|EDX62109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|196029770|gb|EDX68372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|206734955|gb|EDZ52124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208657869|gb|ACI30239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217064081|gb|ACJ78331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|217068436|gb|ACJ82684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|218159054|gb|ACK59046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|218536274|gb|ACK88672.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218540368|gb|ACK92764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218541218|gb|ACK93612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|221242662|gb|ACM15372.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus Q1]
gi|225789761|gb|ACO29978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228590104|gb|EEK47974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228596063|gb|EEK53740.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|228601980|gb|EEK59473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228618700|gb|EEK75692.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228624698|gb|EEK81467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228629909|gb|EEK86560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228635689|gb|EEK92176.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228653094|gb|EEL08974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228658805|gb|EEL14463.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228670938|gb|EEL26245.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|228689234|gb|EEL43056.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228695735|gb|EEL48590.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228700788|gb|EEL53311.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|228710573|gb|EEL62546.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228771354|gb|EEM19828.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228777965|gb|EEM26237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228784494|gb|EEM32515.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228791415|gb|EEM39019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228798262|gb|EEM45261.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228804180|gb|EEM50794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228810829|gb|EEM57175.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228817330|gb|EEM63416.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228823266|gb|EEM69100.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228829435|gb|EEM75063.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228835674|gb|EEM81038.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228841990|gb|EEM87096.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228848633|gb|EEM93479.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228856052|gb|EEN00591.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|296326620|gb|ADH09548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|300378778|gb|ADK07682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324329059|gb|ADY24319.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942942|gb|AEA18838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 193
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 153/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 HIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|138896648|ref|YP_001127101.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermodenitrificans NG80-2]
gi|196249350|ref|ZP_03148048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
gi|166201825|sp|A4ISQ2|CLPP_GEOTN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134268161|gb|ABO68356.1| ATP-dependent Clp protease [Geobacillus thermodenitrificans NG80-2]
gi|196211107|gb|EDY05868.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. G11MC16]
Length = 196
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 111/195 (56%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+F+ I+D +A I +QLLFL AE+P+K+I
Sbjct: 1 MYLIPTVIEQTNRGERAYDIYSRLLKDRIIFLGSPIDDQVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAG+AIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPIEVIERDTDRDNFMTAQKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL D
Sbjct: 181 QEYGIIDRVLTRLED 195
>gi|254805112|ref|YP_003083333.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha14]
gi|254668654|emb|CBA06317.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis alpha14]
Length = 204
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D++L +R ++
Sbjct: 187 KEYGLIDQILENRASLQ 203
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|241668323|ref|ZP_04755901.1| endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 114/200 (57%), Positives = 156/200 (78%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVP V+E+T GER++DIYSRLLKERIVF+ G++ DH A L+ AQLLFLE+E+P K
Sbjct: 2 ITNNLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDK 61
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I YINSPGG+VTAGM +YDTMQFIKP ++T C+G AASMGSLLL+ G KG R++LP++
Sbjct: 62 DIYFYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSS 121
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++HQP GGF GQASDIE HA++I++IK RLN++ + G+ E + + DRD+ M A
Sbjct: 122 QIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMAD 181
Query: 194 EACDWGVVDKVLMSRIDIEE 213
EA ++G++D V+ SR I +
Sbjct: 182 EAKEYGLIDHVIESREAIIK 201
>gi|218295537|ref|ZP_03496350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
gi|218244169|gb|EED10695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
Length = 194
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 106/192 (55%), Positives = 148/192 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQT RGER YDIYSRLLK+RI+F+ I+ +A I AQLLFL+A+NP +EI L
Sbjct: 2 VIPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQF++ P+ST +G AASM +++L+AGEKG R+ALP++++++
Sbjct: 62 YINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G ASDI AQ+I+K K+ LNEI K+ G+ E+VE+ DRD+ +SA EA +
Sbjct: 122 HQPWGGARGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAQEALE 181
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 182 YGLIDQVVTREE 193
>gi|121635023|ref|YP_975268.1| endopeptidase [Neisseria meningitidis FAM18]
gi|161870184|ref|YP_001599354.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis 053442]
gi|166201829|sp|A1KUD9|CLPP_NEIMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082461|sp|A9LZN9|CLPP_NEIM0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120866729|emb|CAM10482.1| endopeptidase [Neisseria meningitidis FAM18]
gi|161595737|gb|ABX73397.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis 053442]
gi|261392408|emb|CAX49950.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Neisseria meningitidis 8013]
gi|325128392|gb|EGC51275.1| endopeptidase Clp [Neisseria meningitidis N1568]
gi|325130325|gb|EGC53091.1| endopeptidase Clp [Neisseria meningitidis OX99.30304]
gi|325132488|gb|EGC55181.1| endopeptidase Clp [Neisseria meningitidis M6190]
gi|325134447|gb|EGC57092.1| endopeptidase Clp [Neisseria meningitidis M13399]
gi|325136185|gb|EGC58793.1| endopeptidase Clp [Neisseria meningitidis M0579]
gi|325138262|gb|EGC60831.1| endopeptidase Clp [Neisseria meningitidis ES14902]
gi|325142516|gb|EGC64917.1| endopeptidase Clp [Neisseria meningitidis 961-5945]
gi|325198463|gb|ADY93919.1| endopeptidase Clp [Neisseria meningitidis G2136]
gi|325201978|gb|ADY97432.1| endopeptidase Clp [Neisseria meningitidis M01-240149]
gi|325204312|gb|ADY99765.1| endopeptidase Clp [Neisseria meningitidis M01-240355]
gi|325208271|gb|ADZ03723.1| endopeptidase Clp [Neisseria meningitidis NZ-05/33]
Length = 204
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D++L +R ++
Sbjct: 187 KEYGLIDQILENRASLQ 203
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 109/196 (55%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVE ++RGER+YDIYSRLLKERI+F+ G I+D +A ++ AQ+LFLE+E+P K+I LYIN
Sbjct: 1 MVVENSSRGERAYDIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS+LL+AG KG R+ALP+ARI++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQ++DI+ A++I++++ N I ++ G+ +++ +RD+ MSA EA +G+
Sbjct: 121 LGGAQGQSTDIQIQAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGL 180
Query: 201 VDKVLMSRIDIEEKSK 216
+D+V+ R E +K
Sbjct: 181 IDEVVT-RPKTEPAAK 195
>gi|283479306|emb|CAY75222.1| ATP-dependent Clp protease proteolytic subunit clpP [Erwinia
pyrifoliae DSM 12163]
Length = 218
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 132/209 (63%), Positives = 171/209 (81%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G +++ + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+EDHMA LI
Sbjct: 12 MSYSG--ERELTAPHMALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDHMANLIV 69
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 70 AQMLFLEAENPEKDIHLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 129
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R+ LPN+R+++HQP GGF GQASDI+ HA++I+K K+ +NE+ K+ G+T E +
Sbjct: 130 AGAKGKRYCLPNSRVMIHQPLGGFQGQASDIDIHAREIIKTKQMMNELMAKHTGQTIETI 189
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ +RD +SASE+ ++G+VD VL R
Sbjct: 190 ERDTNRDRFLSASESVEYGLVDSVLSQRS 218
>gi|91785004|ref|YP_560210.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
xenovorans LB400]
gi|116243097|sp|Q13UT1|CLPP1_BURXL RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|91688958|gb|ABE32158.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
xenovorans LB400]
Length = 215
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 113/206 (54%), Positives = 153/206 (74%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A++I AQLLF
Sbjct: 1 MHSSYPTITGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASVIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL+AG++G
Sbjct: 61 LESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+D+E A++++ ++ RLN + + G++ EE+ + D
Sbjct: 121 KRYALPNARIMIHQPSGGSQGTAADVEIQAKEVLYLRERLNAMMAERTGRSIEEIARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD+ MSA A +G+VD+VL +R +
Sbjct: 181 RDNFMSAHAAKTYGLVDEVLETRAAL 206
>gi|167761297|ref|ZP_02433424.1| hypothetical protein CLOSCI_03702 [Clostridium scindens ATCC 35704]
gi|167660963|gb|EDS05093.1| hypothetical protein CLOSCI_03702 [Clostridium scindens ATCC 35704]
Length = 193
Score = 238 bits (608), Expect = 3e-61, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F+ ++ D A++I AQLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IK I T C+G AASMGS LL+ G KG R ALPNA I
Sbjct: 61 HLYINSPGGSVTAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I+K +++LN+I +N G+ + + +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRQKLNQILAENTGQPLDVIRIGTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D+V+ SR
Sbjct: 181 KAYGLIDEVIKSR 193
>gi|269959005|ref|YP_003328794.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma centrale
str. Israel]
gi|269848836|gb|ACZ49480.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma centrale
str. Israel]
Length = 215
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 138/197 (70%), Positives = 176/197 (89%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG +ED+MA+LI AQL+FLEAENP
Sbjct: 14 EREIMNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENP 73
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMG+LLL+ GE GMR+ALP
Sbjct: 74 EKDISLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALP 133
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGGF GQA+DIE HA++I++IKRRLNEIYVK+ GK+ EE+E +++RD+ M
Sbjct: 134 NSRIMVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMV 193
Query: 192 ASEACDWGVVDKVLMSR 208
A +A D+G+VDKV+ R
Sbjct: 194 AEKAKDFGIVDKVIDKR 210
>gi|229591362|ref|YP_002873481.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
fluorescens SBW25]
gi|259585962|sp|C3JYK0|CLPP_PSEFS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229363228|emb|CAY50311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
fluorescens SBW25]
Length = 211
Score = 238 bits (608), Expect = 4e-61, Method: Composition-based stats.
Identities = 126/193 (65%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LICAQLLFLEAENP K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLICAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG +G RF LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGAFLLTAGAEGKRFCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN + K+ G T EE+E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIRERLNTLMAKHSGHTLEEIERDTNRDNFMSAEAAR 197
Query: 197 DWGVVDKVLMSRI 209
D+G++D V+ R
Sbjct: 198 DYGLIDAVIDKRP 210
>gi|163736126|ref|ZP_02143545.1| Endopeptidase Clp [Phaeobacter gallaeciensis BS107]
gi|161389996|gb|EDQ14346.1| ATP-dependent Clp protease proteolytic subunit [Phaeobacter
gallaeciensis BS107]
Length = 202
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 170/201 (84%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LI AQLL LEAENP KE
Sbjct: 1 MNTLVPMVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLIVAQLLHLEAENPSKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AGE GMRF+LPN+R
Sbjct: 61 ISMYINSPGGVVTSGLSIYDTMQYIKPKVSTLVIGQAASMGSLLLTAGEAGMRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGGF GQA+DI HA++ +K+K+RLNEIYVK+ G+ Y+++ L+RD+ MS +
Sbjct: 121 VMVHQPSGGFQGQATDIMIHAEETLKLKKRLNEIYVKHTGQEYDKIVDALERDNFMSPED 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A D+G++D+++ +R ++++
Sbjct: 181 AKDFGLIDEIVENRSKLDDQD 201
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 120/192 (62%), Positives = 153/192 (79%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMV+EQT+RGERSYDIYSRLLK+RI+ + +I+D +A LI AQLLFL+AE+P K+ISL
Sbjct: 2 LIPMVIEQTSRGERSYDIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPNA +++
Sbjct: 62 YINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA DI HA+ I+K KR+LNEI + G+ YE VE+ DRD+ MSA EA
Sbjct: 122 HQPLGGVRGQAEDIRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAKA 181
Query: 198 WGVVDKVLMSRI 209
+G++D ++ +
Sbjct: 182 YGLIDSIIERKN 193
>gi|307730796|ref|YP_003908020.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|307585331|gb|ADN58729.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
Length = 219
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/202 (56%), Positives = 150/202 (74%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLFLE+E
Sbjct: 5 YPPVTGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLFLESE 64
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL AG+ G R+A
Sbjct: 65 NPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLCAGQPGKRYA 124
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGG G A+DI+ A++++ ++ RLN + + G+ EE+ + DRD+
Sbjct: 125 LPNARIMIHQPSGGGQGTAADIDIQAKEVLYLRERLNTMMAERTGRGVEEIARDTDRDNF 184
Query: 190 MSASEACDWGVVDKVLMSRIDI 211
MSA A +G+VD+VL +R +
Sbjct: 185 MSAFAAKAYGLVDEVLETRAAL 206
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 115/196 (58%), Positives = 152/196 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
++ VP+VVE T R ER+YDI+SRLLK+RIVF+ I+DH+A L+ AQLLFLEAE+P
Sbjct: 5 EIIDQYVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPD 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG VTAG+AIYDTMQ+IK +ST C+GQAASM ++LL+AG KG R+ALPN
Sbjct: 65 KDVYLYINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPN 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG G A D+E +++++IK LN I K+ G+ E++EK DRD MSA
Sbjct: 125 ARIMIHQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSA 184
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G+VDKV+ SR
Sbjct: 185 EEAKEYGIVDKVVSSR 200
>gi|325144548|gb|EGC66847.1| endopeptidase Clp [Neisseria meningitidis M01-240013]
Length = 204
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 155/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D++L +R +
Sbjct: 187 KEYGLIDQILENRASLR 203
>gi|261364459|ref|ZP_05977342.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
mucosa ATCC 25996]
gi|288567379|gb|EFC88939.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
mucosa ATCC 25996]
Length = 206
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCGRDLADLERDTDRDNFMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 189 KEYGLIDQVLENRASLQ 205
>gi|169824905|ref|YP_001692516.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297587291|ref|ZP_06945936.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302379561|ref|ZP_07268046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|303234189|ref|ZP_07320835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
gi|167831710|dbj|BAG08626.1| ATP-dependent protease Clp proteolytic subunit [Finegoldia magna
ATCC 29328]
gi|297575272|gb|EFH93991.1| ATP-dependent Clp protease proteolytic subunit [Finegoldia magna
ATCC 53516]
gi|302312468|gb|EFK94464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna ACS-171-V-Col3]
gi|302494730|gb|EFL54490.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Finegoldia
magna BVS033A4]
Length = 195
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 117/195 (60%), Positives = 158/195 (81%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQ+NRGERSYDI+SRLLKERI+FVTG++ D MA L+ AQLLFLE+E+P+K+
Sbjct: 1 MPSLVPMVVEQSNRGERSYDIFSRLLKERIIFVTGEVNDQMADLVIAQLLFLESEDPKKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG V+AG+AIYDTMQ++KP +ST C+G AASMG++LL++G KG R+ALPNA
Sbjct: 61 IQLYINSPGGSVSAGLAIYDTMQYVKPDVSTICVGMAASMGAILLTSGAKGKRYALPNAD 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
L+HQP GG GQASDIE HA++I+K + LN+I + G+ E++E+ DRD I++A E
Sbjct: 121 TLIHQPLGGAQGQASDIEIHAKNILKKRELLNKILSERTGQPLEKIERDTDRDFILTAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D+V+ +
Sbjct: 181 AKEYGLIDEVIYTSK 195
>gi|255528525|ref|ZP_05395307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296184877|ref|ZP_06853288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|255507783|gb|EET84241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296050659|gb|EFG90082.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
Length = 194
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 118/194 (60%), Positives = 157/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+R+V +T ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRVVMLTEEVNDVTASLVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R ALPNA I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRVALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA+ I+KIK++LN I+ + G+ E +EK +RD+ MSA EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHAERILKIKKKLNTIFSERTGQPLETIEKDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D++++ +
Sbjct: 181 KEYGLIDEIMVKKK 194
>gi|296157194|ref|ZP_06840030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
gi|295892530|gb|EFG72312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. Ch1-1]
Length = 215
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 113/206 (54%), Positives = 153/206 (74%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A++I AQLLF
Sbjct: 1 MHSSYPTITGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASVIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL+AG++G
Sbjct: 61 LESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+D+E A++++ ++ RLN + + G++ EE+ + D
Sbjct: 121 KRYALPNARIMIHQPSGGSQGTAADVEIQAKEVLYLRERLNAMMAERTGRSIEEIARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD+ MSA A +G+VD+VL +R +
Sbjct: 181 RDNFMSAHAAKTYGLVDEVLETRAAL 206
>gi|56707749|ref|YP_169645.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis SCHU S4]
gi|89256249|ref|YP_513611.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica LVS]
gi|110670220|ref|YP_666777.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC198]
gi|115314706|ref|YP_763429.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica OSU18]
gi|118497648|ref|YP_898698.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
novicida U112]
gi|134302069|ref|YP_001122038.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis WY96-3418]
gi|156502310|ref|YP_001428375.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|167010854|ref|ZP_02275785.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. holarctica FSC200]
gi|187931471|ref|YP_001891455.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194323619|ref|ZP_03057395.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. novicida FTE]
gi|224456819|ref|ZP_03665292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis MA00-2987]
gi|254367562|ref|ZP_04983588.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|254369239|ref|ZP_04985251.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|254370252|ref|ZP_04986258.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|254373013|ref|ZP_04988502.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
novicida GA99-3549]
gi|254374463|ref|ZP_04989944.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|254874562|ref|ZP_05247272.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|290953590|ref|ZP_06558211.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica URFT1]
gi|295313091|ref|ZP_06803781.1| ATP-dependent Clp protease proteolytic subunit [Francisella
tularensis subsp. holarctica URFT1]
gi|67460184|sp|Q5NH47|CLPP_FRATT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243138|sp|Q2A3U1|CLPP_FRATH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122325271|sp|Q0BM92|CLPP_FRATO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122971012|sp|Q14IJ9|CLPP_FRAT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201822|sp|A7NBR6|CLPP_FRATF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201823|sp|A0Q6S9|CLPP_FRATN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201824|sp|A4IYB6|CLPP_FRATW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706451|sp|B2SG18|CLPP_FRATM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56604241|emb|CAG45257.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis SCHU S4]
gi|89144080|emb|CAJ79331.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica LVS]
gi|110320553|emb|CAL08640.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC198]
gi|115129605|gb|ABI82792.1| endopeptidase Clp [Francisella tularensis subsp. holarctica OSU18]
gi|118423554|gb|ABK89944.1| ATP-dependent Clp protease subunit P [Francisella novicida U112]
gi|134049846|gb|ABO46917.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis WY96-3418]
gi|134253378|gb|EBA52472.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
holarctica 257]
gi|151568496|gb|EDN34150.1| ATP-dependent Clp protease subunit P [Francisella tularensis subsp.
tularensis FSC033]
gi|151570740|gb|EDN36394.1| ATP-dependent Clp protease subunit P [Francisella novicida
GA99-3549]
gi|151572182|gb|EDN37836.1| hypothetical protein FTDG_00632 [Francisella novicida GA99-3548]
gi|156252913|gb|ABU61419.1| ATP-dependent Clp protease, proteolytic subunit [Francisella
tularensis subsp. holarctica FTNF002-00]
gi|157122189|gb|EDO66329.1| hypothetical protein FTAG_00191 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712380|gb|ACD30677.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. mediasiatica FSC147]
gi|194321983|gb|EDX19465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. novicida FTE]
gi|254840561|gb|EET18997.1| ATP-dependent clp protease proteolytic subunit [Francisella
tularensis subsp. tularensis MA00-2987]
gi|282158920|gb|ADA78311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
tularensis subsp. tularensis NE061598]
Length = 201
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 116/200 (58%), Positives = 155/200 (77%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVP V+E+T GER++DIYSRLLKERIVF+ G++ DH A L+ AQLLFLE+E+P K
Sbjct: 2 ITNNLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDK 61
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I YINSPGG+VTAGM +YDTMQFIKP +ST C+G AASMGSLLL+ G KG R++LP++
Sbjct: 62 DIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSS 121
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++HQP GGF GQASDIE HA++I++IK RLN++ + G+ E + K DRD+ M A
Sbjct: 122 QIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMAD 181
Query: 194 EACDWGVVDKVLMSRIDIEE 213
EA +G++D V+ SR I +
Sbjct: 182 EAKAYGLIDHVIESREAIIK 201
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 151/191 (79%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+EQT RGERSYDIYSRLLK+RIVF+ Q+ D +A I AQLLFLE+E+P K+I L
Sbjct: 5 YIPYVIEQTGRGERSYDIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHL 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGMAIYDTMQ+IK P+ST C+G AASM ++LLS G +G R ALPNA +++
Sbjct: 65 YINSPGGSVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKRLALPNAEVMI 124
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQASDIE HA++I+ ++R+N I ++ G+ E+V + DRD+ M+A EA D
Sbjct: 125 HQPLGGTSGQASDIEIHARNILNTRKRMNAILARHTGQDVEKVAQDTDRDNFMTAQEALD 184
Query: 198 WGVVDKVLMSR 208
+G++D+++ SR
Sbjct: 185 YGLIDRIIESR 195
>gi|22298052|ref|NP_681299.1| ATP-dependent Clp protease proteolytic subunit 1
[Thermosynechococcus elongatus BP-1]
gi|34222557|sp|Q8DLI2|CLPP1_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|22294230|dbj|BAC08061.1| ATP-dependent Clp protease proteolytic subunit 1
[Thermosynechococcus elongatus BP-1]
Length = 229
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 111/201 (55%), Positives = 145/201 (72%), Gaps = 6/201 (2%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQ------IEDHMATLICAQLLFL 66
+VPMVVEQ+ RGER++DIYSRLL+ERI+F+ G I+D +A I AQLLFL
Sbjct: 23 PTHANIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGAGDRRGIDDAVADSIVAQLLFL 82
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+AE+P+K+I LYINSPGG VTAGMAIYDTM+ I+P + T C G AASMG+ LLS G G
Sbjct: 83 DAEDPEKDIYLYINSPGGSVTAGMAIYDTMKHIRPDVCTLCFGLAASMGAFLLSGGTPGK 142
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNARI++HQP GG GQA DIE A++I+ KR+LNE+ ++ G+ E +E +R
Sbjct: 143 RMALPNARIMIHQPLGGAQGQAVDIEIQAREILYHKRKLNELLSQHTGQPIERIEADTER 202
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D MSA EA +G++D+V+
Sbjct: 203 DFFMSAEEAKAYGLIDQVVTR 223
>gi|156362486|ref|XP_001625808.1| predicted protein [Nematostella vectensis]
gi|156212658|gb|EDO33708.1| predicted protein [Nematostella vectensis]
Length = 228
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 117/199 (58%), Positives = 155/199 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVPMV+E T RGER+YDI+SRLLKERIV V G + D ++L+ AQLLFL++E+ + I +
Sbjct: 27 LVPMVIESTGRGERAYDIFSRLLKERIVCVMGPVTDETSSLVIAQLLFLQSESSKLPIHM 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VT+G+ IYDTMQ+I+PPIST+C+GQA SMGSLLL+AG G+R ALP++RI++
Sbjct: 87 YINSPGGTVTSGLGIYDTMQYIQPPISTWCVGQACSMGSLLLAAGSPGLRHALPHSRIMV 146
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQA+DI A++I+K+KR LN IYVK+ GK E +E+ L+RD MS EA +
Sbjct: 147 HQPHGGASGQATDIAIQAEEILKLKRVLNGIYVKHTGKDMETIEQALERDKFMSPEEAKE 206
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++D+VL EE K
Sbjct: 207 FGLIDRVLAHPPTNEELKK 225
>gi|221215056|ref|ZP_03588023.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
gi|221164992|gb|EED97471.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD1]
Length = 208
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 156/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP
Sbjct: 11 EAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENP 70
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G KG RFALP
Sbjct: 71 DKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALP 130
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E + + DRD+ MS
Sbjct: 131 NSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFMS 190
Query: 192 ASEACDWGVVDKVLMSRI 209
+ +A +G++D+VL+ R
Sbjct: 191 SEDAKAYGLIDQVLLKRP 208
>gi|293375439|ref|ZP_06621720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Turicibacter
sanguinis PC909]
gi|325844477|ref|ZP_08168204.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Turicibacter sp. HGF1]
gi|292645992|gb|EFF64021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Turicibacter
sanguinis PC909]
gi|325489151|gb|EGC91535.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Turicibacter sp. HGF1]
Length = 199
Score = 238 bits (607), Expect = 4e-61, Method: Composition-based stats.
Identities = 105/199 (52%), Positives = 149/199 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+EQT GER+YDIYSRLLK+RI+ ++G+I DH A ++ AQLLFL AE+P K+
Sbjct: 1 MSYLVPTVIEQTAHGERAYDIYSRLLKDRIIMLSGEINDHTANIVVAQLLFLAAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++YINSPGG VTAG+AI+DTM +IK +ST C+G AASMG+ LL+AG KG R+ LPN+
Sbjct: 61 INIYINSPGGSVTAGLAIFDTMNYIKCDVSTICVGMAASMGAFLLTAGTKGKRYVLPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQA++I A+ I+K + RLN+I + G+ E++E+ +RD+ MSA E
Sbjct: 121 VMIHQPLGGAQGQATEIAIAAKHILKTRDRLNKILAEQTGQPLEKIEQDTERDNFMSADE 180
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A +G+VD+V+ D+ +
Sbjct: 181 AVAYGLVDQVVTRPTDVTK 199
>gi|195952528|ref|YP_002120818.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
gi|195932140|gb|ACG56840.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobaculum sp. Y04AAS1]
Length = 205
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 122/201 (60%), Positives = 159/201 (79%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
KD + + LVP+VVEQT RGER+YDIYSRLL++RIV + I+DH+A LI AQLLFLEA
Sbjct: 5 KDYQKIIDQLVPIVVEQTPRGERAYDIYSRLLQDRIVILGFPIDDHVANLIVAQLLFLEA 64
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
++P+K+I +YINSPGG VTAG+AIYDTMQ+IKP ++T C+GQAASMG++LL+AG KG RF
Sbjct: 65 QDPEKDIQMYINSPGGSVTAGLAIYDTMQYIKPDVTTICIGQAASMGAVLLAAGTKGKRF 124
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPNARI++HQP GG GQA+DI HA++I +IK LN I GK ++EK +DRD+
Sbjct: 125 ALPNARIMIHQPLGGVQGQATDILIHAEEIKRIKHILNTILANATGKNLRQIEKDVDRDY 184
Query: 189 IMSASEACDWGVVDKVLMSRI 209
MSA EA ++G++DKV+ R
Sbjct: 185 FMSAEEAKNYGLIDKVITKRA 205
>gi|312898487|ref|ZP_07757877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
gi|310620406|gb|EFQ03976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
micronuciformis F0359]
Length = 202
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 115/201 (57%), Positives = 160/201 (79%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ + VP+VVEQ+++GERSYDIYSRLLK+RI+F+TG I+D +A + AQLLFLEA+NP K
Sbjct: 1 MKMQYVPIVVEQSSQGERSYDIYSRLLKDRIIFLTGAIDDTVANSVIAQLLFLEADNPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGGVVTAGMAIYDTM++IKP +ST C+G AASM S+LL+AG KG RFALP++
Sbjct: 61 DIHLYINSPGGVVTAGMAIYDTMRYIKPDVSTICVGSAASMASVLLTAGTKGKRFALPHS 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++++HQP GG GQASDIE HA++I+++++ LN I + G+ + +EK +RD+ M+A
Sbjct: 121 QVMIHQPLGGVQGQASDIEIHAREILRMRKELNGILATHTGQPVDVIEKDTERDNFMTAE 180
Query: 194 EACDWGVVDKVLMSRIDIEEK 214
EA +G+VD++L+ D K
Sbjct: 181 EAKAYGLVDEILIRPGDAAVK 201
>gi|224081363|ref|XP_002306383.1| predicted protein [Populus trichocarpa]
gi|118481948|gb|ABK92906.1| unknown [Populus trichocarpa]
gi|222855832|gb|EEE93379.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 238 bits (607), Expect = 5e-61, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 151/193 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERIV + G I D + ++ AQLLFLE+ENP K I
Sbjct: 34 SLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPINDDTSNVVVAQLLFLESENPSKPIH 93
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL++G KG R ALPNA I+
Sbjct: 94 MYLNSPGGHVTAGLAIYDTMQYIRSPVNTICLGQAASMASLLLASGAKGERKALPNATIM 153
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA D+ H + IV++ LN++Y K+ GK + ++K +DRD+ M+ EA
Sbjct: 154 IHQPSGGYSGQAKDLTIHTKQIVRVWDALNQLYCKHTGKPIDVIQKNMDRDYFMTPEEAK 213
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 214 EFGIIDEVIDQRP 226
>gi|229014309|ref|ZP_04171428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|229099577|ref|ZP_04230505.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229105752|ref|ZP_04236381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229118641|ref|ZP_04247993.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228664833|gb|EEL20323.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228677641|gb|EEL31889.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228683873|gb|EEL37823.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228746909|gb|EEL96793.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
Length = 193
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 152/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 HIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
Length = 202
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 114/202 (56%), Positives = 156/202 (77%), Gaps = 1/202 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQTNRGERSYDIYSRLLK+RI+F+ GQ++D+MA LI AQLLFL+AE+P+K+
Sbjct: 1 MSYLVPMVVEQTNRGERSYDIYSRLLKDRIIFLGGQVDDYMANLIVAQLLFLDAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG ++AGMAIYDTMQ ++ + T C+G AASMG+ LL++G KG R ALPN+
Sbjct: 61 IFLYINSPGGSISAGMAIYDTMQHVRADVHTICVGLAASMGAFLLASGAKGKRTALPNSE 120
Query: 135 ILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQP GG SGQA++IE HA+ I+++K R+N + + G+ E +E+ DRD ++A
Sbjct: 121 ILIHQPLLGGLSGQATEIEIHAKHILRVKERMNRLLAEMTGQPVERIEQDTDRDRYLTAQ 180
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
EA ++G+VD++L + +K
Sbjct: 181 EAKEYGLVDQILEKSEQVAKKK 202
>gi|212640342|ref|YP_002316862.1| ATP-dependent Clp protease proteolytic subunit [Anoxybacillus
flavithermus WK1]
gi|226706440|sp|B7GL34|CLPP_ANOFW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212561822|gb|ACJ34877.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Anoxybacillus flavithermus WK1]
Length = 196
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 111/195 (56%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+DH+A I +QLLFL AE+P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIILGSPIDDHVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGVQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL +
Sbjct: 181 KEYGLIDRVLTRVDE 195
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium sp. YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium sp. YIT 12067]
Length = 197
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 113/197 (57%), Positives = 158/197 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQ++RGERSYDIYSRLLK+RIVFVTG I+D+MA ++ AQLLFLE+E+P K+I
Sbjct: 1 MNYVPIVVEQSSRGERSYDIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AGMAIYDTMQ+IKP +ST CMG AASM S+LL+AG G RFALP +R+
Sbjct: 61 HLYINSPGGSVSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE HA++I++I+ +N++ K+ G+T E++ +RDH +++ EA
Sbjct: 121 MIHQPLGGAQGQATEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+V+ E
Sbjct: 181 KEYGLIDEVVSRSKSAE 197
>gi|313891581|ref|ZP_07825191.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
gi|313120040|gb|EFR43222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Dialister microaerophilus UPII 345-E]
Length = 199
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 114/200 (57%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQT+ GERSYDIYSRLLK+RI+F+ GQIEDHMA +I AQLLFLEAE+P K+I
Sbjct: 1 MAYVPIVVEQTSHGERSYDIYSRLLKDRIIFLDGQIEDHMANVIIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTMQ+I+P +ST C+G ASM ++LL++G KG RFALP++ +
Sbjct: 61 HLYINSPGGVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTSGAKGKRFALPHSNV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE HA++I++++ LN I K+ G++ + ++K +RD+ M+A A
Sbjct: 121 MIHQPLGGVQGQATEIEIHAREILRLRDELNGILAKHTGQSLDVIKKDTERDNFMTAENA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DK+L R ++ K
Sbjct: 181 LKYGLIDKILT-RNELTAKD 199
>gi|225713510|gb|ACO12601.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 121/206 (58%), Positives = 162/206 (78%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ GLVP+VVEQT RGERSYDIYSRLLK+RI+ + GQ++D ++ L+ AQLL
Sbjct: 12 NGPMRAEARSMSGLVPIVVEQTGRGERSYDIYSRLLKDRIICLMGQVDDVISGLMVAQLL 71
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FL+AE+ +K I +YINSPGG VTAG+AIYDTMQ+I+PPI+T+C+GQA SMGSLLL+AG K
Sbjct: 72 FLQAESGKKPIHMYINSPGGSVTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTK 131
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
GMR +LPN+RI++HQPSG GQASDI+ AQ+I+ ++ RLN IYVK+ G+ + VEK++
Sbjct: 132 GMRHSLPNSRIMVHQPSGQSHGQASDIQIQAQEILNLRARLNNIYVKHTGQPLDIVEKSM 191
Query: 185 DRDHIMSASEACDWGVVDKVLMSRID 210
DRD+ MSA +A +G++DKVL +
Sbjct: 192 DRDNFMSADDALKFGLIDKVLETPPK 217
>gi|149376712|ref|ZP_01894470.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
gi|149358951|gb|EDM47417.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter
algicola DG893]
Length = 227
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 114/198 (57%), Positives = 152/198 (76%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ GLVP+V+EQT RGERS+DI+SRLLKER++F+ G +EDHMA LI AQLLFLE+EN
Sbjct: 26 AMVTNSGLVPIVIEQTARGERSFDIFSRLLKERVIFLVGPVEDHMANLIVAQLLFLESEN 85
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAGM+IYDTMQFIKP ++T C+GQAASMG+ LL+ G +G R L
Sbjct: 86 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGGAEGKRACL 145
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+R+++HQP GG+ GQA+DIE H ++I+KI+ LN I + G+ + + K DRD+ M
Sbjct: 146 PNSRVMIHQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQKLDTIAKDTDRDNFM 205
Query: 191 SASEACDWGVVDKVLMSR 208
+A D+G++D +L R
Sbjct: 206 DPQQAKDYGLIDSILDKR 223
>gi|296330330|ref|ZP_06872811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676065|ref|YP_003867737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296152598|gb|EFG93466.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414309|gb|ADM39428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 198
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 156/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++DK+L + ++
Sbjct: 181 LEYGLIDKILTRNTEEQK 198
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 111/196 (56%), Positives = 155/196 (79%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVE + RGER+YDIYSRLLKERI+F+ G I+D +A +I AQ+LFLE+E+P K+I LYIN
Sbjct: 1 MVVENSGRGERAYDIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMGS+LL+AG KG R+ALP+ARI++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQ++DI+ A++I++++ NEI ++ G+ ++ +RD+ MSA EA ++G+
Sbjct: 121 LGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTAKINIDTERDNFMSAEEAKEYGL 180
Query: 201 VDKVLMSRIDIEEKSK 216
+D+V++ D SK
Sbjct: 181 IDEVVLRPKDTSADSK 196
>gi|115311350|sp|Q3M726|CLPP3_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 214
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 105/191 (54%), Positives = 143/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D +A I AQLLFL+AE+ +K+I
Sbjct: 10 NIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDAVANTIVAQLLFLDAEDSEKDIQ 69
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG KG R +LP++RI+
Sbjct: 70 LYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTKGKRMSLPDSRIM 129
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ IK +LN++ + G+ E +E DRD MSA EA
Sbjct: 130 IHQPLGGAQGQAIDIEIQAREILYIKAQLNQLLANHTGQPLERIEADTDRDFFMSAEEAK 189
Query: 197 DWGVVDKVLMS 207
++G++D+V+
Sbjct: 190 NYGLIDQVISR 200
>gi|114771109|ref|ZP_01448549.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium HTCC2255]
gi|114548391|gb|EAU51277.1| Protease subunit of ATP-dependent Clp protease [alpha
proteobacterium HTCC2255]
Length = 204
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 140/204 (68%), Positives = 176/204 (86%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D +V+ LVPMVVEQT+RGERS+DI+SRLLKERI+FV+G + D M+TLI AQLLFL
Sbjct: 1 MRDPLEVYNNTLVPMVVEQTSRGERSFDIFSRLLKERIIFVSGPVHDGMSTLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+IS+YINSPGGVVTAGMAIYDTMQ+I+P +ST C+GQAASMGSLLL+AGEKGM
Sbjct: 61 EAENPKKDISMYINSPGGVVTAGMAIYDTMQYIRPKVSTLCVGQAASMGSLLLAAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNAR+++HQPSGGFSGQASDI HA++I+++K RLN+IYVK+C + VE LDR
Sbjct: 121 RFALPNARVMVHQPSGGFSGQASDIALHAKEILELKDRLNKIYVKHCSQKLSTVEDALDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A EA DWG++D+++ R D
Sbjct: 181 DNFMTAEEAKDWGLIDEIVQKRED 204
>gi|294678131|ref|YP_003578746.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodobacter
capsulatus SB 1003]
gi|294476951|gb|ADE86339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodobacter
capsulatus SB 1003]
Length = 209
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 131/206 (63%), Positives = 171/206 (83%), Gaps = 1/206 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD D+++ LVPMVVEQT+RGER+YDIYSRLLKERI+F+ G D M++LICAQLLFL
Sbjct: 1 MKDPVDLYMNTLVPMVVEQTSRGERAYDIYSRLLKERIIFLAGPFHDGMSSLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGGVVT+G+AIYDTMQ+I+P +ST +GQAASMGS++ AGEKGM
Sbjct: 61 EAENPSKEISMYINSPGGVVTSGLAIYDTMQYIRPKVSTLVIGQAASMGSVIACAGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+RI++HQPSGGF GQA+DI HA++ KI++RL EIYV++ G++ EEV + L+R
Sbjct: 121 RFSLPNSRIMVHQPSGGFQGQATDIMIHARETEKIRQRLYEIYVRHTGRSLEEVAEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
D MS EA +WG +D++L +R ++
Sbjct: 181 DRFMSPEEALEWGHLDEILSARPSLD 206
>gi|302671762|ref|YP_003831722.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
gi|302396235|gb|ADL35140.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
Length = 201
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 109/201 (54%), Positives = 150/201 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGERSYDIYSRLLKERIVF+ ++ A+ I AQLLFLEAE+P K+I
Sbjct: 1 MSLIPYVIEQTSRGERSYDIYSRLLKERIVFLGEEVNAASASTIVAQLLFLEAEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +++GMAIYDTM +IK +ST C+G AASMG+ LL+ G KG R ALPNA +
Sbjct: 61 HMYINSPGGEISSGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRMALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K K ++N + N GK+YE+V +RD+ +SA EA
Sbjct: 121 MIHQPLGGTQGQATEIEIAAKHILKTKEKMNRMLAANTGKSYEQVAADTERDNWLSAQEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
D+G++D ++ +R +E K
Sbjct: 181 LDYGLIDSIIENRPSEKEDKK 201
>gi|239828281|ref|YP_002950905.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
WCH70]
gi|259585956|sp|C5D7M9|CLPP_GEOSW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239808574|gb|ACS25639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. WCH70]
Length = 196
Score = 237 bits (606), Expect = 5e-61, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D +A I +QLLFL AE+P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAG+AIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILAENTGQPVEVIERDTDRDNFMTAQKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL +
Sbjct: 181 QEYGIIDRVLTRIDE 195
>gi|323705911|ref|ZP_08117482.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium xylanolyticum LX-11]
gi|323534709|gb|EGB24489.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium xylanolyticum LX-11]
Length = 194
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 110/194 (56%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RIVF+ +I D A+L+ AQLLFLE E+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIYSRLLKDRIVFLGEEINDVSASLVVAQLLFLEGEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+ AIYDTMQ+IKP + T C+G AAS G+ LL+AG KG RF+LPN+ I
Sbjct: 61 WLYINSPGGSITSAFAIYDTMQYIKPDVVTMCVGMAASAGAFLLAAGAKGKRFSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K+K++LN+I + G+ E++E+ +RD M EA
Sbjct: 121 MIHQPLGGTQGQATDIKIHAERIIKMKQKLNKILSERTGQPLEKIERDTERDFFMDPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D++L+ R
Sbjct: 181 KAYGLIDEILVKRK 194
>gi|187928950|ref|YP_001899437.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12J]
gi|241663134|ref|YP_002981494.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12D]
gi|309781948|ref|ZP_07676679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|187725840|gb|ACD27005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12J]
gi|240865161|gb|ACS62822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12D]
gi|308919292|gb|EFP64958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
Length = 215
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 155/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G++ D A L+ AQLLFLE+ENP K+I
Sbjct: 23 LGLVPMVVEQSGRGERAYDIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKDI 82
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V++G+A+YDTMQFIKP +ST CMG AASMG+ LL+AG KG R ALPN+RI
Sbjct: 83 SLYINSPGGSVSSGLAMYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPNSRI 142
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ ++ RLN + + G+ +++ + DRD+ MS+ +A
Sbjct: 143 MIHQPLGGARGQASDIEIQAREILYLRERLNTVLSEVTGQPVDKIARDTDRDNFMSSEQA 202
Query: 196 CDWGVVDKVLMSR 208
++G++D+V+ R
Sbjct: 203 KEYGLIDQVIAKR 215
>gi|160933529|ref|ZP_02080917.1| hypothetical protein CLOLEP_02375 [Clostridium leptum DSM 753]
gi|156867406|gb|EDO60778.1| hypothetical protein CLOLEP_02375 [Clostridium leptum DSM 753]
Length = 201
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 116/193 (60%), Positives = 150/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGERSYDI+SRLL +RIV +T ++ D A+L+ AQLL+LE ++P K+I
Sbjct: 9 MSLVPYVVEQTSRGERSYDIFSRLLNDRIVMLTEEVNDTSASLVVAQLLYLEGQDPTKDI 68
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGM+IYDTMQ+IK +ST CMG AASMG+ LL+AG KG R ALPN+ I
Sbjct: 69 SLYINSPGGSVTAGMSIYDTMQYIKCDVSTICMGMAASMGAFLLAAGAKGKRMALPNSDI 128
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI HA I + K++LNEI + G+ E +E+ +RD+ MSA EA
Sbjct: 129 MIHQPSGGAQGQATDILIHANHIARTKKKLNEILAERTGQPLEVIERDTERDNFMSAQEA 188
Query: 196 CDWGVVDKVLMSR 208
D+G+VDKV+ R
Sbjct: 189 ADYGLVDKVIYKR 201
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 104/191 (54%), Positives = 148/191 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E++++ DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLM 206
++G++D+V+
Sbjct: 181 KEYGLIDEVME 191
>gi|295677486|ref|YP_003606010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295437329|gb|ADG16499.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 215
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 114/204 (55%), Positives = 153/204 (75%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLF
Sbjct: 1 MPSSYPSVSALGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL+AG++G
Sbjct: 61 LESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLTAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+DIE A++++ ++ RLN + + G+T +++ + D
Sbjct: 121 KRYALPNARIMIHQPSGGGQGTAADIEIQAKEVLYVRARLNAMMAERTGRTIDDIARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD+ MSA EA ++G++D VL +R
Sbjct: 181 RDNFMSALEAREYGLIDDVLEARA 204
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 105/195 (53%), Positives = 139/195 (71%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
++P V+EQT RGERSYDIYSRLLK+RIVF+ I+D +A I AQ+LFL AE+P+K+
Sbjct: 1 MSSVIPYVIEQTGRGERSYDIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG +AG AIYDTMQ++KP + T C G AAS ++LL AG KG RFALPN+
Sbjct: 61 IYFYINSPGGSTSAGFAIYDTMQYVKPDVQTICSGMAASFAAILLMAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDI A I++ + LN I + G+ E +EK +DRD+ MSA E
Sbjct: 121 IMIHQPHGGAQGQASDIAISANRILRTRAVLNTIAAECTGQPLERIEKDMDRDYFMSADE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D+V+
Sbjct: 181 AREYGIIDQVITPNK 195
>gi|323484460|ref|ZP_08089826.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323692476|ref|ZP_08106710.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|323402238|gb|EGA94570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323503473|gb|EGB19301.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
Length = 193
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGERSYDI+SRLLKERI+F+ ++ D A LI +QLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIESTSRGERSYDIFSRLLKERIIFLGEEVTDTSAGLIVSQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTM +IK +ST C G AASMG+ LL+ G KG RFALPNA +
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMNYIKCDVSTICFGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I++ K++LNEI N G+ YE +E+ DRD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVAEKILQTKKKLNEILAANTGQPYEVIERDTDRDNYMTAQEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+ S
Sbjct: 181 MEYGLIDRVIAS 192
>gi|254441469|ref|ZP_05054962.1| Clp protease [Octadecabacter antarcticus 307]
gi|198251547|gb|EDY75862.1| Clp protease [Octadecabacter antarcticus 307]
Length = 209
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 119/209 (56%), Positives = 159/209 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D D ++ LVPMVVEQT RGER+YDI+SRLLKERI+FV G I D M+ L+ AQLL LE
Sbjct: 1 MQDPIDTYMNLVPMVVEQTARGERAYDIFSRLLKERIIFVNGPIHDGMSQLVVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGG V +GM+IYDTMQ+I+P +ST G AASMGS++ GEKGMR
Sbjct: 61 AENPKKEISMYINSPGGAVHSGMSIYDTMQYIRPKVSTLICGMAASMGSVIAVGGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LPN+ I++HQPSGG G+ASD+ A+ I + + R ++Y+K+ G+T++ VEK LDRD
Sbjct: 121 FSLPNSEIMVHQPSGGSQGKASDMLITARHIEQTRERFYKLYMKHTGQTHKSVEKALDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
M+ EA +WG +D+++ SR E + K
Sbjct: 181 TWMTPEEAKEWGHLDEIVESRGKAEGEDK 209
>gi|331001370|ref|ZP_08324994.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parasutterella excrementihominis YIT 11859]
gi|329568629|gb|EGG50431.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Parasutterella excrementihominis YIT 11859]
Length = 209
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 112/209 (53%), Positives = 159/209 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + L+PMV+EQ+ RGERS+DIYSRLL++R+VF+ G + D A L+ AQLLFLE
Sbjct: 1 MPDFSNFNSALIPMVIEQSGRGERSFDIYSRLLRDRVVFLVGPVTDQSANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+ISLYI+SPGG V AG++IYDTMQFIKP +ST C+G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISLYIDSPGGSVYAGLSIYDTMQFIKPDVSTICLGMAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+RI++HQPSGG +G A+DIE A++I++++ RLN I ++ G++ E++ +RD
Sbjct: 121 FALPNSRIMIHQPSGGTNGTAADIEIQAKEILELRSRLNTILSEHTGQSIEKIAVDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ MS+++A ++G++D V R + K K
Sbjct: 181 NFMSSAQAVEYGIIDGVFRKRSEQIIKKK 209
>gi|170718338|ref|YP_001783566.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus somnus
2336]
gi|189082460|sp|B0UW20|CLPP_HAES2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|168826467|gb|ACA31838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
somnus 2336]
Length = 193
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 159/193 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F+TG++ED MA LI AQLLFLEAE+P K+I
Sbjct: 1 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+
Sbjct: 61 NIYINSPGGSVTAGMAIYDTMQFIKPNVRTLCIGQACSMGAFLLAGGTAGKRAALPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E++E+ DRD+ MSA +A
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD VL+ R
Sbjct: 181 KLYGLVDDVLIKR 193
>gi|328543681|ref|YP_004303790.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
gi|326413425|gb|ADZ70488.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
Length = 211
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 138/210 (65%), Positives = 179/210 (85%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
KD ++F LVPMVVEQTNRGER++DIYSRLLKERI+F+TG IED +ATL+CAQLL+L
Sbjct: 1 MKDPVELFTNTLVPMVVEQTNRGERAFDIYSRLLKERIIFLTGPIEDQLATLVCAQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEI+LYINSPGG+VT+G+AIYDTMQFI+P +ST C+GQAASMGSLLL+AG+KGM
Sbjct: 61 EAENPNKEIALYINSPGGLVTSGLAIYDTMQFIRPEVSTLCIGQAASMGSLLLAAGQKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPNAR+++HQPSGGF GQA+DI HAQ+I+K+KRRLN+IYVK+ G++ + VE+ L+R
Sbjct: 121 RFSLPNARVMVHQPSGGFRGQAADIMLHAQEILKLKRRLNDIYVKHTGQSLDSVEEALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A A +G+VD V+ R + + +
Sbjct: 181 DNFMTADMAKGFGIVDSVISDRASLGTEGQ 210
>gi|254455562|ref|ZP_05068991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
gi|207082564|gb|EDZ59990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Pelagibacter sp. HTCC7211]
Length = 203
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 125/203 (61%), Positives = 165/203 (81%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ LVPMVVEQ+N+GER+YDIYSRLLKERI+F+TGQI D++A+L+ AQLLFL
Sbjct: 1 MTTKLSEHMNTLVPMVVEQSNKGERAYDIYSRLLKERIIFLTGQINDNVASLVTAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAE+P+KEI LYINSPGG+VTAG+ IYDTMQ++KP IST C+GQAASMGS LL+AG KG
Sbjct: 61 EAEDPKKEIYLYINSPGGLVTAGLGIYDTMQYVKPDISTLCIGQAASMGSFLLAAGTKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF+LPN+R+++HQPS GF GQ +DIE HA ++ +K+RLNEIY K+ GK+ +EV+ L+R
Sbjct: 121 RFSLPNSRVMVHQPSAGFQGQVTDIEIHANEVSSLKKRLNEIYSKHTGKSVDEVKAALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+ M+A A D+G++D+V+ R
Sbjct: 181 DNFMTADVAKDFGLIDEVVEKRS 203
>gi|83592885|ref|YP_426637.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum ATCC 11170]
gi|124013826|sp|Q2RU45|CLPP_RHORT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83575799|gb|ABC22350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodospirillum
rubrum ATCC 11170]
Length = 216
Score = 237 bits (606), Expect = 6e-61, Method: Composition-based stats.
Identities = 134/205 (65%), Positives = 167/205 (81%), Gaps = 1/205 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+D DVF LVPMVVEQTNRGERSYDIYSRLLKERI+F+TGQ+ D +A+LICAQLL
Sbjct: 1 MIDRDPIDVFNNTLVPMVVEQTNRGERSYDIYSRLLKERIIFLTGQVHDGVASLICAQLL 60
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FLE+ENP K+IS YINSPGGVVT+GMAIYDTMQ+I+ P+ST C+GQAASMGSLLL AGE
Sbjct: 61 FLESENPSKDISFYINSPGGVVTSGMAIYDTMQYIRSPVSTVCIGQAASMGSLLLCAGEA 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R+A PNARI++HQPSGGF GQA+DIE A++I+ ++ RLN IYVK+ G+ E +E+ +
Sbjct: 121 GKRYATPNARIMIHQPSGGFQGQAADIEIQAREILALRERLNRIYVKHTGQPLETIERAM 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ M+A E+ +G+ D V+ R
Sbjct: 181 DRDNYMTAEESRAFGLTDSVIERRA 205
>gi|238026973|ref|YP_002911204.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
gi|237876167|gb|ACR28500.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia glumae
BGR1]
Length = 217
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 123/208 (59%), Positives = 158/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLASHAPQDFETKALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AG+AIYDTMQFIKP +ST CMG AASMG+ LLS+
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGLAASMGAFLLSS 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN+I +N G+ E +
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRERLNKILAENTGQDVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 190 RDTDRDNFMSSDDAKAYGLIDHVSAKRP 217
>gi|187935559|ref|YP_001887076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B str. Eklund 17B]
gi|226706444|sp|B2TPB9|CLPP_CLOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|187723712|gb|ACD24933.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum B str. Eklund 17B]
Length = 199
Score = 237 bits (605), Expect = 6e-61, Method: Composition-based stats.
Identities = 117/199 (58%), Positives = 156/199 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLKERI+ ++G++ D + LI +QLLFLE+E+P K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKERIIMLSGEVNDDSSNLIVSQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LLS+G G R+ALPNA I
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLSSGANGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI+ HA I+KIK LN+I +N + E +E ++RD+ M+A EA
Sbjct: 121 MIHQPLGGFQGQATDIQIHANRILKIKESLNKILSENTNQPLEVIEADVERDNFMTADEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+G+VDKV+ ++K
Sbjct: 181 KTYGLVDKVITKNETGKDK 199
>gi|26989024|ref|NP_744449.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
KT2440]
gi|148548677|ref|YP_001268779.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
F1]
gi|38257487|sp|Q88KJ0|CLPP_PSEPK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214701|sp|A5W635|CLPP_PSEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24983847|gb|AAN67913.1|AE016423_8 ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida KT2440]
gi|148512735|gb|ABQ79595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
putida F1]
gi|171362771|dbj|BAG15849.1| probable ATP-dependent clp protease [Pseudomonas putida]
Length = 213
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQLLFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG KG R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DIE HAQ+I+ IK RLNE+ + G+ E +++ +RD+ MSAS A
Sbjct: 138 IHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAA 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V R
Sbjct: 198 EYGLIDSVYDKRQ 210
>gi|310829091|ref|YP_003961448.1| hypothetical protein ELI_3526 [Eubacterium limosum KIST612]
gi|308740825|gb|ADO38485.1| hypothetical protein ELI_3526 [Eubacterium limosum KIST612]
Length = 195
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 151/195 (77%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ + LVPMV+EQT RGERS+DIYSRLLKERI+F+ G+I D ++LI AQL+FLEA+NP K
Sbjct: 1 MNMNLVPMVIEQTGRGERSFDIYSRLLKERIIFLDGEINDTTSSLIVAQLIFLEADNPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I +YINSPGG +T+G AIYDTM FIK +ST C+G AASMG+ LL+AG KG R ALPN+
Sbjct: 61 DIEMYINSPGGSITSGFAIYDTMNFIKCDVSTMCVGMAASMGAFLLAAGAKGKRKALPNS 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
I++HQP GG GQ+ D+E +A+ ++K + +LNEI + G+ + + + DRD+ MSA
Sbjct: 121 EIMIHQPLGGAQGQSVDVEIYAKRLIKTREKLNEILSEKTGQPIDVIARDTDRDNFMSAE 180
Query: 194 EACDWGVVDKVLMSR 208
EA ++G++D+++ SR
Sbjct: 181 EALEYGLIDQIVSSR 195
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
Length = 195
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 148/195 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E++++ DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+V+
Sbjct: 181 KEYGLIDEVMEPESK 195
>gi|260589157|ref|ZP_05855070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Blautia
hansenii DSM 20583]
gi|331082573|ref|ZP_08331698.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 6_1_63FAA]
gi|260540577|gb|EEX21146.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Blautia
hansenii DSM 20583]
gi|330400551|gb|EGG80181.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 6_1_63FAA]
Length = 193
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 147/193 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGER+YDIYSRLLK+RI+F+ ++ D A LI AQLLFLE+E+P K+I
Sbjct: 1 MSLVPYVIEQTSRGERNYDIYSRLLKDRIIFLGEEVTDVSANLIAAQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGM IYDTMQ+IK +ST CMG AASMG+ LL+ G KG R ALPNA I
Sbjct: 61 HLYINSPGGSVTAGMVIYDTMQYIKCDVSTICMGLAASMGAFLLAGGAKGKRMALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ AQ I+K + +LN I +N G+T E + + +RD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIDIVAQQILKTRHKLNSILAQNTGQTLETIARDTERDNYMTAQEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ R
Sbjct: 181 MAYGLIDSVIEHR 193
>gi|310639654|ref|YP_003944412.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|309244604|gb|ADO54171.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
Length = 198
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VPMVVEQ+NRGER+YDIYSRLLK+RI+ + + D +A I AQ+LFL AE+P+K+I
Sbjct: 1 MSYVPMVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAI+DTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A+ I+K++ +LN I G+ E +EK DRD+ MSA +A
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKVL S
Sbjct: 181 KEYGIIDKVLTS 192
>gi|297531315|ref|YP_003672590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
gi|297254567|gb|ADI28013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
Length = 196
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RIVF+ I+D +A I +QLLFL AE+P+K+I
Sbjct: 1 MYLIPTVIEQTNRGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAG+AIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL +
Sbjct: 181 MEYGIIDRVLTRADE 195
>gi|163942836|ref|YP_001647720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
weihenstephanensis KBAB4]
gi|228993855|ref|ZP_04153759.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|228999881|ref|ZP_04159453.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|229007435|ref|ZP_04165032.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|229062796|ref|ZP_04200101.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|229135952|ref|ZP_04264713.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229169852|ref|ZP_04297548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|163865033|gb|ABY46092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|228613566|gb|EEK70695.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228647494|gb|EEL03568.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|228716556|gb|EEL68259.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228753823|gb|EEM03264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228759823|gb|EEM08797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228765911|gb|EEM14561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
Length = 193
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 152/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 HIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|109899441|ref|YP_662696.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudoalteromonas atlantica T6c]
gi|123064308|sp|Q15R46|CLPP_PSEA6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109701722|gb|ABG41642.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudoalteromonas atlantica T6c]
Length = 212
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 126/209 (60%), Positives = 159/209 (76%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVPMVVEQT +GERSYDIYSRLLKE ++F+ GQ+EDHMA LI AQ+LFL
Sbjct: 1 MMNTPFDPTNALVPMVVEQTAKGERSYDIYSRLLKENVIFMVGQVEDHMANLIVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+I LYINSPGG VTAGMAIYDTM FIKP +ST C+GQAASMG+ LLS G KG
Sbjct: 61 EAENPEKDIFLYINSPGGSVTAGMAIYDTMNFIKPDVSTVCIGQAASMGAFLLSGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPNAR+++HQP GGF GQASD E HA++I+ IK ++N + + G+ Y++V + DR
Sbjct: 121 RYCLPNARVMIHQPLGGFQGQASDFEIHAKEILSIKEKMNRLMAAHTGQDYDKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ +SA E+ D+G+VD+VL +R D
Sbjct: 181 DNFLSAQESVDYGLVDQVLANRPDASNSD 209
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 108/194 (55%), Positives = 146/194 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RGER++DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+K+I
Sbjct: 29 GVLPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQ 88
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI+
Sbjct: 89 IYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIM 148
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE AQ+I+ +K LN + ++ G+ E + + DRDH +S +EA
Sbjct: 149 IHQPMGGAQGQAVDIEIQAQEILYLKETLNGLMAEHTGQPLETIAEDTDRDHFLSPAEAV 208
Query: 197 DWGVVDKVLMSRID 210
++G++D+V+ S D
Sbjct: 209 EYGLIDRVVDSPAD 222
>gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus
profundus DSM 14977]
gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus
profundus DSM 14977]
Length = 194
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 147/194 (75%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP V+EQT RGER YDIYSRLLK+RI+F+ I+ +A I AQ+LFLEA+NP +EI L
Sbjct: 2 IVPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDSQVANTIVAQMLFLEAQNPNQEIKL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQ++K P++T +G AASMG+ LL+AGE G R+ALP+AR+++
Sbjct: 62 YINSPGGDVYAGLAIYDTMQYVKSPVATIVVGMAASMGAFLLAAGEAGQRYALPHARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DI A+ I+K K+ LNE+ K+ G+ E+VE DRD M+A EA D
Sbjct: 122 HQPWGGAQGQATDIAIQAEQILKSKKLLNELLAKHTGQPVEKVEADSDRDFWMTADEARD 181
Query: 198 WGVVDKVLMSRIDI 211
+G+VD+V+ R D
Sbjct: 182 YGLVDRVIA-REDT 194
>gi|210621780|ref|ZP_03292809.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
gi|210154544|gb|EEA85550.1| hypothetical protein CLOHIR_00754 [Clostridium hiranonis DSM 13275]
Length = 195
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 110/194 (56%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT RGERSYDI+SRLLK+RI+F+ ++ D A LI AQLLFLEAE+P K+I
Sbjct: 1 MALVPYVVEQTGRGERSYDIFSRLLKDRIIFLCDEVNDDTAGLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTM +IKP +ST C+G AASMG+ LLS+G KG R+ALPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMNYIKPDVSTICIGMAASMGAFLLSSGAKGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+++K +LN+I +N G+ E++ +RD+ M A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIRAKRIIRMKEKLNQILSENTGQPLEKIMADTERDNFMEADEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+V+ ++
Sbjct: 181 LAYGLIDEVITNKP 194
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
Length = 202
Score = 237 bits (605), Expect = 7e-61, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 142/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ ++ D + LI AQLLFLEAE+P K+I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN + G+ +++ + +RD MSA EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLANHTGQPLDKIAEDTERDFFMSAEEAQE 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVINRRP 192
>gi|116062109|dbj|BAF34687.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
protease [Aeromonas veronii]
Length = 207
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 126/198 (63%), Positives = 155/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
L+PMVVEQT +GERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 10 SSPRNALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 69
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++IS+YINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G KG RF LP
Sbjct: 70 DQDISIYINSPGGAVTAGMSIYDTMQFIKPDVSTVCMGQACSMGAFLLAGGAKGKRFCLP 129
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NAR+++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ +E+ DRD+ MS
Sbjct: 130 NARVMIHQPLGGFQGQASDIQIHAQEILKIKNTLNERLAFHTGQDMATIERDTDRDNFMS 189
Query: 192 ASEACDWGVVDKVLMSRI 209
A +A +G+VD VL R
Sbjct: 190 AEQAVAYGLVDGVLSQRS 207
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 110/211 (52%), Positives = 155/211 (73%), Gaps = 4/211 (1%)
Query: 6 CAKKDSEDVFL---GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ K +++ +VPMVVEQ+ GER++DIYSRLL+ERIVF+ ++D +A I AQ
Sbjct: 44 ISSKRPSEIYAAPESVVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQ 103
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFL+AE+P+K+I LYINSPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS G
Sbjct: 104 LLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGG 163
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG R ALP++RI++HQP GG GQA +IE A++I+ IK+RLN++ ++ G+ ++ +
Sbjct: 164 TKGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAKEILYIKKRLNDMLAEHTGQPFDTIAA 223
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+RD MSA EA D+G++DKV+ SR D+ +
Sbjct: 224 DTERDFFMSAQEAVDYGLIDKVI-SRSDLSD 253
>gi|323144789|ref|ZP_08079363.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
gi|322415435|gb|EFY06195.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Succinatimonas hippei YIT 12066]
Length = 200
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 125/198 (63%), Positives = 160/198 (80%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVPMV+EQT RGERS+DIYSRLLKER++F+TG++EDHMA LI AQLLFLE+++P K
Sbjct: 1 MASTLVPMVIEQTARGERSFDIYSRLLKERVIFMTGEVEDHMADLIVAQLLFLESDDPDK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGGVVTAGMAIYDTMQ+IKP + T CMGQA SMGS LL+ G G RFALP++
Sbjct: 61 DIYLYINSPGGVVTAGMAIYDTMQYIKPDVCTLCMGQACSMGSFLLAGGAPGKRFALPHS 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GGF GQASDI HA++ ++KR L E+ K+ GK+ +EV + DRD+ MSA
Sbjct: 121 RIMIHQPLGGFKGQASDIMIHARETERVKRTLTELLAKHTGKSVDEVMQDCDRDNFMSAE 180
Query: 194 EACDWGVVDKVLMSRIDI 211
EA +G++D+V+ SR +I
Sbjct: 181 EALAYGLIDRVITSRDEI 198
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 119/191 (62%), Positives = 153/191 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+EQT RGER+YDIYSRLLK+RI+F+ IE+H+A L+ AQ+LFLE+E+P K+I+L
Sbjct: 4 LVPIVIEQTGRGERAYDIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPDKDINL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQ+IK P+ST C+GQAASM ++LL+AG KG R ALPN+R++L
Sbjct: 64 YINSPGGSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPNSRVML 123
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE HA++I KI+ RLNEI + + E+V K DRD MSA EA
Sbjct: 124 HQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDRDFFMSAEEALA 183
Query: 198 WGVVDKVLMSR 208
+G+VDKV+ R
Sbjct: 184 YGIVDKVIEKR 194
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 119/194 (61%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT++GERSYDIYSRLLKERI+F+ G++EDHMA LI AQLLFLE+E+P+K+I
Sbjct: 22 MAVIPMVVEQTSKGERSYDIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDI 81
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G KG RFALP+AR+
Sbjct: 82 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARV 141
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L + + G+ +E+V +RD+ MSA EA
Sbjct: 142 MIHQPLGGARGQATDIQIQAQEILKLKEMLTKRMAGHSGQPFEKVAADTERDNFMSAFEA 201
Query: 196 CDWGVVDKVLMSRI 209
++G++DKVL R
Sbjct: 202 AEYGLIDKVLTHRD 215
>gi|56421597|ref|YP_148915.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
kaustophilus HTA426]
gi|261420500|ref|YP_003254182.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
Y412MC61]
gi|319768169|ref|YP_004133670.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|67460172|sp|Q5KVD9|CLPP_GEOKA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56381439|dbj|BAD77347.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Geobacillus kaustophilus HTA426]
gi|261376957|gb|ACX79700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC61]
gi|317113035|gb|ADU95527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
Length = 196
Score = 237 bits (605), Expect = 8e-61, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RIVF+ I+D +A I +QLLFL AE+P K+I
Sbjct: 1 MYLIPTVIEQTNRGERAYDIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAG+AIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL +
Sbjct: 181 MEYGIIDRVLTRADE 195
>gi|222055723|ref|YP_002538085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
FRC-32]
gi|254763790|sp|B9M0Y1|CLPP_GEOSF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|221565012|gb|ACM20984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
FRC-32]
Length = 199
Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+D ++ L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGAIDDTVSNLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTM++IK P+ST C+GQAASMG+ LLS GEKG RF+L N+RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLANSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HAQ+I+++K++LNE+ ++ G+T E++E +RD+ MS +A
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILRMKKKLNELLAEHSGQTVEKIEADTERDYFMSGEDAKT 181
Query: 198 WGVVDKVLMSRI 209
+G++D ++
Sbjct: 182 YGIIDSIITRNT 193
>gi|88810607|ref|ZP_01125864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
gi|88792237|gb|EAR23347.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrococcus
mobilis Nb-231]
Length = 214
Score = 237 bits (604), Expect = 8e-61, Method: Composition-based stats.
Identities = 118/206 (57%), Positives = 159/206 (77%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ + E + GLVPMVVEQT RGER+YDIYSRLLKER++F+ G +EDH A L+ AQLLF
Sbjct: 4 SSDRRHEPMATGLVPMVVEQTARGERAYDIYSRLLKERVIFLVGPVEDHQANLLIAQLLF 63
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+I LYINSPGGVV+AG+AIYDTMQF+KP +ST C+GQAASMG+LLL+ G G
Sbjct: 64 LESENPDKDIHLYINSPGGVVSAGLAIYDTMQFVKPDVSTVCLGQAASMGALLLTGGAAG 123
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ LPN+RI++HQP GGF GQA+D+E HA++I+ ++ RLN+I ++ G+ E +++ +
Sbjct: 124 KRYCLPNSRIMIHQPLGGFQGQATDVEIHAREILAMRERLNQILAQHTGQDIETIQQDTE 183
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD+ M A +G+VD VL R +
Sbjct: 184 RDNFMGPEAAQSYGIVDGVLRDRGKL 209
>gi|78066693|ref|YP_369462.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
383]
gi|167586932|ref|ZP_02379320.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ubonensis Bu]
gi|90101404|sp|Q39FE8|CLPP_BURS3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77967438|gb|ABB08818.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
sp. 383]
Length = 217
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 157/198 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP
Sbjct: 20 EAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENP 79
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G KG RFALP
Sbjct: 80 DKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALP 139
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RLN++ ++ G+ E + + DRD+ MS
Sbjct: 140 NSRVMIHQPLGGARGQASDIEIQAREILYLKERLNQLLAQHTGQDVERIARDTDRDNFMS 199
Query: 192 ASEACDWGVVDKVLMSRI 209
+ +A +G++D+VL+ R
Sbjct: 200 SEDAKAYGLIDQVLLKRP 217
>gi|15837789|ref|NP_298477.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
9a5c]
gi|18203347|sp|Q9PE41|CLPP_XYLFA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|9106157|gb|AAF83997.1|AE003953_1 ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
9a5c]
Length = 208
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 124/201 (61%), Positives = 164/201 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+D+MA LI AQLLFLEAE
Sbjct: 2 DDVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+I++YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+A
Sbjct: 62 NPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + +RD+
Sbjct: 122 LPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA +A +G+VD+VL R +
Sbjct: 182 KSAVDAQAYGLVDQVLGQRPE 202
>gi|30265176|ref|NP_847553.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Ames]
gi|47530690|ref|YP_022039.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. 'Ames Ancestor']
gi|49187986|ref|YP_031239.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Sterne]
gi|65317122|ref|ZP_00390081.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
gi|165869926|ref|ZP_02214583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167635263|ref|ZP_02393578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|167640458|ref|ZP_02398721.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|170687959|ref|ZP_02879172.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|170707727|ref|ZP_02898178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|177652976|ref|ZP_02935303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190567666|ref|ZP_03020578.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis Tsiankovskii-I]
gi|227817909|ref|YP_002817918.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|229599890|ref|YP_002869370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|254686423|ref|ZP_05150282.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. CNEVA-9066]
gi|254735629|ref|ZP_05193336.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Western North America USA6153]
gi|254744284|ref|ZP_05201964.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Kruger B]
gi|254755582|ref|ZP_05207615.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Vollum]
gi|254757037|ref|ZP_05209065.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. Australia 94]
gi|67460531|sp|Q81X63|CLPP2_BACAN RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|30259853|gb|AAP29039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47505838|gb|AAT34514.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49181913|gb|AAT57289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|164714249|gb|EDR19769.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167511501|gb|EDR86884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|167529306|gb|EDR92058.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|170127284|gb|EDS96160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|170668068|gb|EDT18818.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|172081751|gb|EDT66821.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190561082|gb|EDV15055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis Tsiankovskii-I]
gi|227003920|gb|ACP13663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|229264298|gb|ACQ45935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
Length = 193
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 152/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLE+++P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+
Sbjct: 61 HIYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEA 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E +++ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+ +R
Sbjct: 181 LEYGLIDKIFTNR 193
>gi|229541478|ref|ZP_04430538.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
gi|229325898|gb|EEN91573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
coagulans 36D1]
Length = 196
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D+++ I +QLLFLEAENP+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVSNSIVSQLLFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ IKP + T C+G AASMGS+LL+AG KG R+ALPN+ +
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQIIKPDVQTICVGMAASMGSVLLTAGTKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ + +LN+I + G+ E +E+ DRD+ MSA +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILYTRAKLNKILSDHTGQPIEVIERDTDRDNFMSAEKA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D ++ +
Sbjct: 181 KEYGLIDHIMTKKE 194
>gi|226533042|ref|NP_001147355.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|194700894|gb|ACF84531.1| unknown [Zea mays]
gi|195610476|gb|ACG27068.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 36 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG G R ALPNAR++
Sbjct: 96 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI HA++I+K++ RLN+IY K+ G+ + +E+ ++RD M EA
Sbjct: 156 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAH 215
Query: 197 DWGVVDKVLMSRI 209
+WG++D+V+ R
Sbjct: 216 EWGLIDEVIEHRP 228
>gi|167464584|ref|ZP_02329673.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 196
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 115/197 (58%), Positives = 158/197 (80%), Gaps = 1/197 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQ RGERSYDIYSRLLK+RI+F+ I+D + L+ AQLLFL A++ K+I
Sbjct: 1 MSLIPMVVEQEARGERSYDIYSRLLKDRIIFIGSAIDDDVVNLVIAQLLFLSAQDADKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+ IYDTMQ+IKP +ST C+G AASMGSLLL+AG KG RFALPN+ +
Sbjct: 61 HLYINSPGGSVTAGLGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA I+K +++LNEIYV + G+TY++++K DRD+ +SA +A
Sbjct: 121 MIHQPLGGVRGQAADIKIHADWILKTRKKLNEIYVHHTGQTYDKIDKDTDRDNFLSALDA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+V+ R D++
Sbjct: 181 KEYGLIDEVIT-RSDLK 196
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|166201799|sp|A7Z939|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
Length = 198
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 110/198 (55%), Positives = 156/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++DKVL + ++
Sbjct: 181 LEYGLIDKVLTRNTEDQK 198
>gi|315641411|ref|ZP_07896485.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
italicus DSM 15952]
gi|315482847|gb|EFU73369.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
italicus DSM 15952]
Length = 194
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 108/194 (55%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++GQ+ D +A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIISQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTM F+K + T MG AASMGS LL+AG+KG RFALPNA I
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMNFVKADVQTIVMGMAASMGSFLLTAGKKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K + RLN I + G+ E +EK DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKTRERLNNILAERTGQPLEVIEKDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D++L+++
Sbjct: 181 KDYGLIDQILVNKK 194
>gi|294501768|ref|YP_003565468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|295707118|ref|YP_003600193.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|294351705|gb|ADE72034.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294804777|gb|ADF41843.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
Length = 195
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 110/195 (56%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL AE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIILGSAIDDNVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ E +++ DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNSILAERTGQPLEVLQRDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 181 LEYGLIDKVLENDPK 195
>gi|107028898|ref|YP_625993.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia AU 1054]
gi|115351962|ref|YP_773801.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria AMMD]
gi|116689944|ref|YP_835567.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia HI2424]
gi|170702050|ref|ZP_02892966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|170733282|ref|YP_001765229.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia MC0-3]
gi|171320790|ref|ZP_02909797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|172060888|ref|YP_001808540.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
ambifaria MC40-6]
gi|206560359|ref|YP_002231123.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
gi|116243129|sp|Q1BH85|CLPP_BURCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122322952|sp|Q0BEF6|CLPP_BURCM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201802|sp|A0K847|CLPP_BURCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|105898062|gb|ABF81020.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia AU 1054]
gi|115281950|gb|ABI87467.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
ambifaria AMMD]
gi|116648033|gb|ABK08674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
cenocepacia HI2424]
gi|169816524|gb|ACA91107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
cenocepacia MC0-3]
gi|170133036|gb|EDT01448.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria IOP40-10]
gi|171093960|gb|EDT39074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MEX-5]
gi|171993405|gb|ACB64324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
ambifaria MC40-6]
gi|198036400|emb|CAR52296.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
cenocepacia J2315]
Length = 217
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 156/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP
Sbjct: 20 EAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENP 79
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G KG RFALP
Sbjct: 80 DKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALP 139
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E + + DRD+ MS
Sbjct: 140 NSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMS 199
Query: 192 ASEACDWGVVDKVLMSRI 209
+ +A +G++D+VL+ R
Sbjct: 200 SEDAKAYGLIDQVLLKRP 217
>gi|119945201|ref|YP_942881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Psychromonas
ingrahamii 37]
gi|259585963|sp|A1SUW7|CLPP_PSYIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119863805|gb|ABM03282.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychromonas
ingrahamii 37]
Length = 207
Score = 237 bits (604), Expect = 9e-61, Method: Composition-based stats.
Identities = 118/207 (57%), Positives = 157/207 (75%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+++ + L+PMVVEQT +GERSYDIYSRLLKER++F+TG +EDH+A +I AQ
Sbjct: 1 MSNPFAGNTDPISNALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGPVEDHVANVIAAQ 60
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+E+P+K+I +YINSPGG ++AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G
Sbjct: 61 LLFLESESPEKDIFIYINSPGGSISAGMAIYDTMQFIKPDVSTVCMGMAASMGAFLLASG 120
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R LPNA++++HQP GGF GQASD E HA++I+ K R+NE+ + GK E + +
Sbjct: 121 APGKRHCLPNAKVMIHQPLGGFQGQASDFEIHAKEILATKHRMNELLAFHTGKDIEIIAQ 180
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ M ASEA ++G+VD VL R
Sbjct: 181 DTDRDNFMRASEAVEYGIVDSVLTHRK 207
>gi|116243161|sp|Q1RJH2|CLPP_RICBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 227
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 125/202 (61%), Positives = 165/202 (81%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E + VP+V+EQT+RGER+YDIYSRLLKERI+FV G IEDHMA LI AQLLFLE
Sbjct: 15 ENFKEKYPMSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLE 74
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGS LL GEKGMR
Sbjct: 75 AENPEKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMR 134
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LP++R+++HQPSGG+ GQA+DIE HAQ+ +KIK+ LN +Y K+ G+ + VEK+++RD
Sbjct: 135 YSLPHSRVMIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERD 194
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MS EA +G++DK++ R
Sbjct: 195 NFMSPEEAKKFGIIDKIITHRD 216
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|6685314|sp|Q9WZF9|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
Length = 203
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 150/192 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVE T R ER+YDI+SRLLK+RIVF+ I+D++A L+ AQLLFLEAE+P K++ L
Sbjct: 12 YVPIVVESTGRYERAYDIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYL 71
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTMQ+IK +ST C+GQAASM ++LL+AG KG R+ALPNARI++
Sbjct: 72 YINSPGGSVTAGLAIYDTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMI 131
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A D+E +++++IK LN I K+ G+ E++EK DRD MSA EA +
Sbjct: 132 HQPLGGAEGPAKDVEIITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKE 191
Query: 198 WGVVDKVLMSRI 209
+G+VDKV+ +R
Sbjct: 192 YGIVDKVVSTRE 203
>gi|307822658|ref|ZP_07652889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylobacter
tundripaludum SV96]
gi|307736262|gb|EFO07108.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylobacter
tundripaludum SV96]
Length = 215
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 165/198 (83%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVP+V+EQT RGERS+DIYSRLLKER++F+ GQ+ED+ A LI AQLLFLE+ENP K+I
Sbjct: 18 GLVPIVIEQTARGERSFDIYSRLLKERVIFLVGQVEDYSANLIVAQLLFLESENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+ G KG R+ LP++R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLAGGAKGKRYCLPHSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQASDI+ HA++I+ I+ +LN+I + G+ E+V++ DRD+ +SA++A
Sbjct: 138 IHQPLGGYQGQASDIDIHAREILLIREKLNKILSDHTGQPMEKVQQDTDRDNFLSANDAV 197
Query: 197 DWGVVDKVLMSRIDIEEK 214
+G++D+VL+SR + +K
Sbjct: 198 SYGLIDQVLLSRATVADK 215
>gi|330817271|ref|YP_004360976.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
gi|327369664|gb|AEA61020.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
gladioli BSR3]
Length = 217
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 123/208 (59%), Positives = 157/208 (75%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ A +D E LGLVP+VVE + RGERSYDIYSRLLKERIVF+ G++ D A L+ A
Sbjct: 10 TLASHAPQDFETKALGLVPIVVETSGRGERSYDIYSRLLKERIVFMVGEVNDQTANLVVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+ISLYINSPGG V+AG+AIYDTMQFIKP +ST CMG AASMG+ LLS+
Sbjct: 70 QLLFLESENPDKDISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGLAASMGAFLLSS 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R+ALPNAR+++HQP GG GQASDIE A++I+ ++ RLN+I N G+ E +
Sbjct: 130 GAKGKRYALPNARVMIHQPLGGARGQASDIEIQAREILYLRERLNKILADNTGQDVERIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ MS+ +A +G++D V R
Sbjct: 190 RDTDRDNFMSSDDAKAYGLIDHVTAKRP 217
>gi|329122525|ref|ZP_08251109.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
gi|327473154|gb|EGF18577.1| ATP-dependent Clp protease, protease subunit [Haemophilus aegyptius
ATCC 11116]
Length = 211
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P K+I
Sbjct: 19 MSVIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDI 78
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG VTAGMAIYDTMQFIKP I T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 79 NIYINSPGGSVTAGMAIYDTMQFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARV 138
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LN+ + G++ E +EK DRD+ MSA EA
Sbjct: 139 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEA 198
Query: 196 CDWGVVDKVLMSR 208
+G+VD+VL+ R
Sbjct: 199 QVYGLVDEVLVKR 211
>gi|323697668|ref|ZP_08109580.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 120/201 (59%), Positives = 163/201 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMV+E T R ER+YDIYSRLLK+RI+ + I+DH+A+LICAQLLFLE+E+P+KEI
Sbjct: 1 MVAIPMVIETTGRTERAYDIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVT+GMAIYDTMQ+I P++T CMGQAASM SLLL AGEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQASDI HA++I+++K LN I ++ G++ E++ DRD+ MS+ EA
Sbjct: 121 LIHQPLGGAQGQASDISIHAKEILRMKDELNGIMARHTGQSIEKITADTDRDYFMSSEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++DKV+ SR D++E K
Sbjct: 181 LEYGLIDKVMKSRADVDESIK 201
>gi|116785036|gb|ABK23566.1| unknown [Picea sitchensis]
Length = 243
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 159/193 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GL+PMV+EQT+RGER+YDI+SRLLKERI+ + G IED A ++ AQLLFLE+ENP K I+
Sbjct: 32 GLIPMVIEQTSRGERAYDIFSRLLKERIICINGVIEDDTAAVVVAQLLFLESENPAKPIN 91
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P+STFCMGQAASMGSLLL+AG KG R +LPNARI+
Sbjct: 92 LYINSPGGVVTAGLAIYDTMQYIRSPVSTFCMGQAASMGSLLLAAGAKGERRSLPNARIM 151
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI A++I+ + RLN +Y K+ G++ +++EK ++RD MS EA
Sbjct: 152 IHQPSGGASGQASDIAIQAKEILLTRDRLNSLYAKHTGQSIDKIEKCMERDMFMSPEEAK 211
Query: 197 DWGVVDKVLMSRI 209
++G+VD V+ R
Sbjct: 212 EFGLVDTVIEQRP 224
>gi|34558484|ref|NP_908299.1| ATP-dependent Clp protease proteolytic subunit [Wolinella
succinogenes DSM 1740]
gi|60389700|sp|Q7M7M3|CLPP_WOLSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481778|emb|CAE11199.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT [Wolinella
succinogenes]
Length = 195
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T RGERSYDIYSRLLK+RI+ ++G+I D +A+ I +Q+LFLEAE+P+K+I
Sbjct: 1 MNYIPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEINDGVASSIVSQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+GM+IYDTM ++KP I T C+GQAASMG+ LLS G KG RF+LPN+RI
Sbjct: 61 YLYINSPGGVITSGMSIYDTMNYVKPDICTICIGQAASMGAFLLSCGTKGKRFSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I+++K LN I N G+ E++ K DRD MSA E+
Sbjct: 121 MIHQPLGGAQGQATDIEIQAKEILRLKSILNGILASNTGQPLEKIAKDTDRDFFMSAQES 180
Query: 196 CDWGVVDKVLMS 207
++G++D VL
Sbjct: 181 KEYGLIDNVLEK 192
>gi|225028671|ref|ZP_03717863.1| hypothetical protein EUBHAL_02950 [Eubacterium hallii DSM 3353]
gi|224953981|gb|EEG35190.1| hypothetical protein EUBHAL_02950 [Eubacterium hallii DSM 3353]
Length = 194
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+ GERSYDIYSRLLKERI+F+ ++ D A+LI +QLLFLE+E+P+K+I
Sbjct: 1 MSLVPYVIEQTSHGERSYDIYSRLLKERIIFLGEEVNDTTASLIVSQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYI SPGG VTAGMAIYDTMQF+K +ST CMG AASMG+ LL+ G KG R ALPN+ I
Sbjct: 61 SLYIMSPGGSVTAGMAIYDTMQFVKCDVSTICMGMAASMGAFLLAGGAKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++IE A+ I+ K +LN I +N G+ YE++ + +RD+ M+A +A
Sbjct: 121 MIHQPSGGAQGQATEIEIVAEHILHTKEKLNRILAENTGQPYEKIVQDTERDNYMTAEQA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 KAYGLIDAVVEKRQ 194
>gi|126668931|ref|ZP_01739872.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
ELB17]
gi|126626594|gb|EAZ97250.1| ATP-dependent Clp protease proteolytic subunit [Marinobacter sp.
ELB17]
Length = 211
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 113/206 (54%), Positives = 151/206 (73%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ + LVPMV+EQT RGERS+DIYSRLLKER++F+ G +EDHMA L+ AQ
Sbjct: 2 MQKPIDGSAMSTSAALVPMVIEQTARGERSFDIYSRLLKERVIFMVGPVEDHMANLVVAQ 61
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+ENP K+I LYINSPGG V+AGM+IYDTMQFIKP ++T C+GQAASMG+ LL+ G
Sbjct: 62 LLFLESENPDKDIHLYINSPGGSVSAGMSIYDTMQFIKPDVATLCVGQAASMGAFLLAGG 121
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R LPN+R+++HQP GG+ GQA+DIE H ++I+KI+ LN I + G+ E + +
Sbjct: 122 AAGKRACLPNSRVMIHQPLGGYQGQATDIEIHTREILKIRHTLNSILAHHTGQDLETISR 181
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSR 208
DRD+ M ++A +G++D VL R
Sbjct: 182 DTDRDNFMDPTQAKAYGLIDSVLDKR 207
>gi|323488686|ref|ZP_08093928.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
gi|323397704|gb|EGA90508.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
Length = 203
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 107/201 (53%), Positives = 152/201 (75%), Gaps = 1/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+R++ + I+D++A I AQLLFLEAE+P K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFI+P + T C+G AASMG+ LL+AG KG R ALPNA +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I + G+ + + K DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++D+V+ R + E K
Sbjct: 181 LEYGLIDQVIT-RSKLPENHK 200
>gi|254520131|ref|ZP_05132187.1| endopeptidase Clp [Clostridium sp. 7_2_43FAA]
gi|226913880|gb|EEH99081.1| endopeptidase Clp [Clostridium sp. 7_2_43FAA]
Length = 198
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 114/195 (58%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGERSYDI+SRLLK+RI+ ++G+I D + L+ +QLLFLE+E+P K+I
Sbjct: 1 MSLVPMVVEQTSRGERSYDIFSRLLKDRIIMLSGEINDTTSNLVVSQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMGS LLS+G KG RF LPN+ I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGSFLLSSGAKGKRFVLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+D + HA+ I+KIK LN I +N + E+++ ++RD+ M+A EA
Sbjct: 121 MIHQPLGGFQGQATDFDIHARRIIKIKESLNRILSENTNQPLEKIKTDVERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G+VDKV+
Sbjct: 181 MNYGLVDKVITKNDK 195
>gi|317133441|ref|YP_004092755.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ethanoligenens harbinense YUAN-3]
gi|315471420|gb|ADU28024.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Ethanoligenens harbinense YUAN-3]
Length = 194
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 110/194 (56%), Positives = 151/194 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+EQT+RGERSYDI+SRLL +RI+ ++ Q+ D A+L+ AQLLFLE ++P K+
Sbjct: 1 MSNLVPYVIEQTSRGERSYDIFSRLLNDRIIMLSDQVNDVTASLVVAQLLFLEGQDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +T+GMAI+DTMQ++K +ST C+G AASMGS LL+AG KG RF LPN+
Sbjct: 61 IQLYINSPGGSITSGMAIFDTMQYVKCDVSTICIGMAASMGSFLLAAGTKGKRFVLPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG GQASDI+ A+ I++I++R+NE+Y GK EE+E+ +RD+ ++A E
Sbjct: 121 IMIHQPSGGAQGQASDIKIAAEHIIRIRKRMNELYSGFTGKPVEEIERDTERDNFLTAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G+VDKV+ R
Sbjct: 181 AVAYGLVDKVITKR 194
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 237 bits (604), Expect = 1e-60, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 152/197 (77%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V+E R ER+YDIYSRLLK+RIVF+ I D +A +I AQLLFLE+++P K+I LY
Sbjct: 5 MPVVIETEGRYERAYDIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDPDKDIFLY 64
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VT+G+ IYDTMQ++KP IST C+GQAASMG++LL+AG KG R++LP +RI++H
Sbjct: 65 INSPGGSVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLPYSRIMIH 124
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG G A DI+ HA++I+++K LN I K+ G++ E++EK +RD M+A EA ++
Sbjct: 125 QPWGGAEGTAIDIQIHAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMNAQEALNY 184
Query: 199 GVVDKVLMSRIDIEEKS 215
G++DKV+ ++ + K
Sbjct: 185 GLIDKVITTKSEATAKE 201
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + RLN+I + G+ E++EK DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+
Sbjct: 181 KEYGLIDEVMEPEK 194
>gi|302804055|ref|XP_002983780.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
gi|300148617|gb|EFJ15276.1| hypothetical protein SELMODRAFT_48156 [Selaginella moellendorffii]
Length = 206
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 118/194 (60%), Positives = 161/194 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GL+PMV+E T RGER+YDI+SRLLKERIV + G I D A+L+ AQLL+LE+ENP K I
Sbjct: 5 GLIPMVIEHTARGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLYLESENPLKPIH 64
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+AGE G R +LPNAR++
Sbjct: 65 LYINSPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGEPGQRRSLPNARVM 124
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI A++I+ ++ RLN++Y K+ G + E+++++++RDH MS EA
Sbjct: 125 VHQPSGGASGQASDIAIQAREILDMRSRLNKLYAKHTGSSIEKIDQSMERDHFMSPEEAK 184
Query: 197 DWGVVDKVLMSRID 210
++G++D+V++ R +
Sbjct: 185 EFGLIDEVIVQRPE 198
>gi|303257392|ref|ZP_07343405.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium 1_1_47]
gi|302859749|gb|EFL82827.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Burkholderiales bacterium 1_1_47]
Length = 209
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 111/209 (53%), Positives = 159/209 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + L+PMV+EQ+ RGERS+DIYSRLL++R+VF+ G + D A L+ AQLLFLE
Sbjct: 1 MPDFSNFNSALIPMVIEQSGRGERSFDIYSRLLRDRVVFLVGPVTDQSANLVVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+ISLYI+SPGG V AG++IYDTMQFIKP +ST C+G AASMG+ LL+AG KG R
Sbjct: 61 SENPDKDISLYIDSPGGSVYAGLSIYDTMQFIKPDVSTICLGMAASMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPN+RI++HQPSGG +G A+DIE A++I++++ RLN I ++ G++ E++ +RD
Sbjct: 121 FALPNSRIMIHQPSGGTNGTAADIEIQAKEILELRSRLNTILSEHTGQSIEKIAVDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ MS+++A ++G++D V R + + K
Sbjct: 181 NFMSSAQAVEYGIIDGVFRKRSEQIIRKK 209
>gi|239636619|ref|ZP_04677621.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
gi|239597974|gb|EEQ80469.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus warneri L37603]
Length = 196
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 104/191 (54%), Positives = 147/191 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG R+ALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E++++ DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLM 206
+G+VD+V+
Sbjct: 181 KAYGLVDEVME 191
>gi|73663232|ref|YP_302013.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
gi|124013830|sp|Q49VZ2|CLPP_STAS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72495747|dbj|BAE19068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 194
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 108/190 (56%), Positives = 149/190 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN+I + G++ E++E+ DRD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEQDTDRDNFLSAEEA 180
Query: 196 CDWGVVDKVL 205
D+G+VD+V+
Sbjct: 181 KDYGLVDQVM 190
>gi|94264491|ref|ZP_01288278.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|94266601|ref|ZP_01290283.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93452772|gb|EAT03310.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
gi|93455050|gb|EAT05277.1| Endopeptidase Clp [delta proteobacterium MLMS-1]
Length = 200
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 110/200 (55%), Positives = 158/200 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT RGERSYDIYSRLLKERI+F+ + D +A ++ AQ+LFLEA++P K+I
Sbjct: 1 MSLIPFVIEQTPRGERSYDIYSRLLKERIIFLGTGVNDEVANVVIAQMLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG VTAG+AIYDTM+++K I+T C+GQAASMG++LL+AG KG R+ALPNARI
Sbjct: 61 TFYINSPGGSVTAGLAIYDTMRYVKCDIATLCLGQAASMGAVLLAAGTKGKRYALPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQASDI+ HA++I+++++ LN++ + G+ ++++ +RD+ MS+ EA
Sbjct: 121 LIHQPMGGFQGQASDIDIHAREILRMRQGLNKMLADHTGQKLKKIQTDTERDYFMSSEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKVL+ R E
Sbjct: 181 KTYGLIDKVLLERTTASEDD 200
>gi|34498013|ref|NP_902228.1| ATP-dependent Clp protease proteolytic subunit [Chromobacterium
violaceum ATCC 12472]
gi|60389718|sp|Q7NUY9|CLPP_CHRVO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34103868|gb|AAQ60228.1| ATP-dependent Clp protease proteolytic subunit [Chromobacterium
violaceum ATCC 12472]
Length = 210
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 122/208 (58%), Positives = 157/208 (75%), Gaps = 3/208 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K E LGLVPMVVEQ+ RGER+YDIYSRLLKERIVF+ G + D A L+ AQ+LFL
Sbjct: 1 MKSMMEPQGLGLVPMVVEQSGRGERAYDIYSRLLKERIVFLVGPVTDESANLVVAQMLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I YINSPGG +TAGM+IYDTM FIKP +ST C+GQAASMG+ LL+AG G
Sbjct: 61 ESENPDKDIHFYINSPGGSITAGMSIYDTMNFIKPDVSTLCIGQAASMGAFLLAAGTHGK 120
Query: 127 RFALPNARILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
RFAL N+R+++HQP SGQ +DIE HA+++VK+K ++NE+ K+ G+T E V+
Sbjct: 121 RFALENSRVMIHQPLLYGGGLSGQVTDIEIHARELVKVKAKMNELLAKHSGQTLERVQSD 180
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDI 211
+RD+ MSA EA +G++DKVL SR D+
Sbjct: 181 TERDNFMSAEEARAYGMIDKVLSSRRDV 208
>gi|254448838|ref|ZP_05062294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
gi|198261528|gb|EDY85817.1| ATP-dependent Clp protease, proteolytic subunit ClpP [gamma
proteobacterium HTCC5015]
Length = 236
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 123/205 (60%), Positives = 163/205 (79%), Gaps = 1/205 (0%)
Query: 5 GCAKKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G A +++ LVPMVVEQ+ RGER++DIYSRLLKER++F+ GQ+E+HMA LI AQL
Sbjct: 32 GVAMNHTDNNIQANLVPMVVEQSARGERAFDIYSRLLKERVIFMVGQVEEHMANLIVAQL 91
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEA+NP K+ISLYINSPGG VTAGMAIYDTM+FIKP +ST C+GQAASMG+ LLS G
Sbjct: 92 LFLEADNPDKDISLYINSPGGSVTAGMAIYDTMRFIKPDVSTLCIGQAASMGAFLLSGGA 151
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG RFALPN+ +++HQP GGF GQA+DI+ HA++I+K K +LN + + G+ +E V +
Sbjct: 152 KGKRFALPNSSVMIHQPLGGFQGQATDIDIHARNILKTKEKLNRMLADHTGQPFERVVED 211
Query: 184 LDRDHIMSASEACDWGVVDKVLMSR 208
+RD+ M A EA ++G++D VL++R
Sbjct: 212 TERDNFMGADEAKEYGLIDDVLVTR 236
>gi|323527161|ref|YP_004229314.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|323384163|gb|ADX56254.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 227
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 114/206 (55%), Positives = 152/206 (73%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
LGLVP V+EQ+ RGER+YDIYSRLL+ERIVF+ G + + A+LI AQLLF
Sbjct: 1 MQSSYLSATGLGLVPTVIEQSGRGERAYDIYSRLLRERIVFLVGPVNEQSASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ENP K+IS YINSPGG V G+AIYDTMQFIKP +ST C G AASMG+ LL AG++G
Sbjct: 61 LESENPDKDISFYINSPGGSVYDGLAIYDTMQFIKPEVSTLCTGFAASMGTFLLCAGQRG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALPNARI++HQPSGG G A+DI+ A++++ ++ RLN + + G++ EE+ + D
Sbjct: 121 KRYALPNARIMIHQPSGGSQGTAADIDIQAKEVLYLRERLNAMMAERTGRSVEEIARDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD+ MSA A +G+VD+VL +R +
Sbjct: 181 RDNFMSALAAKTYGLVDEVLETRAAL 206
>gi|298491692|ref|YP_003721869.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298233610|gb|ADI64746.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 232
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 103/192 (53%), Positives = 142/192 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D++A I AQLLFL+AE+ K+I
Sbjct: 27 NNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSGKDI 86
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG G R +LP++RI
Sbjct: 87 QLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRI 146
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A++I+ IK LN++ K+ G+ + +E +RD MSA EA
Sbjct: 147 MIHQPLGGAQGQAIDIEIQAREILYIKGNLNQLMAKHTGQPLDRIEADTERDFFMSAEEA 206
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 207 KNYGLIDQVISR 218
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 117/192 (60%), Positives = 157/192 (81%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+VVEQT RGERSYDIYSRLLK+RIVF+ G I+D ++ L+ AQLLFLEAE+P K+I L
Sbjct: 2 LVPIVVEQTGRGERSYDIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTM++IK P+ST C+GQAASMG+ LLS GEKG RF+L N+RI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HAQ+I+++K++LNE+ ++ G+ E++E +RD+ MS +A +
Sbjct: 122 HQPLGGFQGQATDIHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDYFMSGEDAKN 181
Query: 198 WGVVDKVLMSRI 209
+G++D ++
Sbjct: 182 YGIIDSIISRNT 193
>gi|152995749|ref|YP_001340584.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinomonas
sp. MWYL1]
gi|254763795|sp|A6VW20|CLPP_MARMS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|150836673|gb|ABR70649.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinomonas
sp. MWYL1]
Length = 210
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
GLVPMV+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 16 NGLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESENPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+AG G R+ LPN+R+
Sbjct: 76 HLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRV 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQASDIE H ++I+ IK +LNEI + GK E+V DRD+ M+ A
Sbjct: 136 MIHQPLGGYQGQASDIEIHTREILSIKHKLNEIISFHTGKPIEQVALDTDRDNFMNPQTA 195
Query: 196 CDWGVVDKVLMSRI 209
D+G++D++L R
Sbjct: 196 KDYGLIDEILQKRT 209
>gi|125582984|gb|EAZ23915.1| hypothetical protein OsJ_07636 [Oryza sativa Japonica Group]
Length = 318
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 72 GLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVH 131
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG +G R ALPNAR++
Sbjct: 132 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVM 191
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD M EA
Sbjct: 192 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEAR 251
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 252 DWGLIDEVIENRP 264
>gi|125540417|gb|EAY86812.1| hypothetical protein OsI_08189 [Oryza sativa Indica Group]
Length = 318
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 72 GLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVH 131
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG +G R ALPNAR++
Sbjct: 132 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVM 191
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD M EA
Sbjct: 192 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEAR 251
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 252 DWGLIDEVIENRP 264
>gi|115447465|ref|NP_001047512.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|49388184|dbj|BAD25310.1| unknown protein [Oryza sativa Japonica Group]
gi|113537043|dbj|BAF09426.1| Os02g0634500 [Oryza sativa Japonica Group]
gi|215692767|dbj|BAG88235.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 298
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 72 GLVPMVIETTSRGERAYDIFSRLLKERIVLIHGPIADETASLVVAQLLFLESENPLKPVH 131
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG +G R ALPNAR++
Sbjct: 132 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGARGERRALPNARVM 191
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD M EA
Sbjct: 192 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTGQEIDKIEQCMERDLFMDPEEAR 251
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 252 DWGLIDEVIENRP 264
>gi|258646880|ref|ZP_05734349.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
gi|260404319|gb|EEW97866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dialister
invisus DSM 15470]
Length = 207
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 113/198 (57%), Positives = 153/198 (77%), Gaps = 1/198 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQT+ GERSYDIYSRLLK+RIVF+ G I+DH A +I AQ LFLEAE+P K+I
Sbjct: 1 MPYVPIVVEQTSHGERSYDIYSRLLKDRIVFLDGPIDDHTANVIIAQFLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGVVTAGMAIYDTMQ+I+P +ST C+G ASM ++LL+AGEKG R+ALP+A +
Sbjct: 61 HFYINSPGGVVTAGMAIYDTMQYIRPDVSTICIGSCASMAAVLLTAGEKGKRYALPHASV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI HA++I++++ LN I + G+T + V K +RD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATDIAIHAKEIIRLRSELNGIIAAHSGQTLKTVMKDTERDNFMTADAA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+G++DK+L R ++ E
Sbjct: 181 LKYGLIDKILT-RNELAE 197
>gi|328676003|gb|AEB28678.1| ATP-dependent Clp protease proteolytic subunit [Francisella cf.
novicida 3523]
Length = 201
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 115/200 (57%), Positives = 155/200 (77%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ LVP V+E+T GER++DIYSRLLKERIVF+ G++ DH A L+ AQLLFLE+E+P K
Sbjct: 2 ITNNLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDK 61
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I YINSPGG+VTAGM +YDTMQFIKP +ST C+G AASMGSLLL+ G KG R++LP++
Sbjct: 62 DIYFYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSS 121
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++HQP GGF GQASDIE HA++I++IK RLN++ + G+ + + K DRD+ M A
Sbjct: 122 QIMIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLDTIIKDTDRDNFMMAD 181
Query: 194 EACDWGVVDKVLMSRIDIEE 213
EA +G++D V+ SR I +
Sbjct: 182 EAKAYGLIDHVIESREAIIK 201
>gi|304413826|ref|ZP_07395243.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
gi|304283546|gb|EFL91941.1| ATP-dependent serine protease [Candidatus Regiella insecticola
LSR1]
Length = 261
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 128/216 (59%), Positives = 169/216 (78%), Gaps = 7/216 (3%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + + LVPMVVEQT+RGER+YDIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLE
Sbjct: 42 SRADQVSTMALVPMVVEQTSRGERAYDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLE 101
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP K+ISLYINSPGGV+TAGM+IYDTMQFIKP + T C+GQA SMG+ LL+AG KG R
Sbjct: 102 AENPDKDISLYINSPGGVITAGMSIYDTMQFIKPDVITLCIGQACSMGAFLLTAGTKGKR 161
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQ SDIE H+++I +K R+N + K+ GK EE+EK +RD
Sbjct: 162 FCLPNSRVMIHQPLGGYQGQVSDIEIHSKEIRNVKNRMNTLMAKHTGKALEEIEKDTERD 221
Query: 188 HIMSASEACDWGVVDKVLMSR-------IDIEEKSK 216
+ +SA E+ ++G+VD+VL +R ++KSK
Sbjct: 222 YFLSAEESVNYGLVDQVLCTRETVSNLDEKADKKSK 257
>gi|297569273|ref|YP_003690617.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
gi|296925188|gb|ADH85998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurivibrio alkaliphilus AHT2]
Length = 200
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 112/200 (56%), Positives = 160/200 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT RGERSYDIYSRLLKERI+F+ + D +A +I AQ+LFLEA++P K+I
Sbjct: 1 MSLIPFVIEQTPRGERSYDIYSRLLKERIIFLGTGVNDDVANVIIAQMLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGGVVTAG+AIYDTM++IK ++T C+GQAASMG++LL+AG +G R+ALPN+RI
Sbjct: 61 TFYINSPGGVVTAGLAIYDTMRYIKCDVATLCLGQAASMGAVLLAAGTEGKRYALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG+ GQASDI+ HA++I+++++ LN I + G++ + ++K +RD+ MSA E+
Sbjct: 121 LIHQPMGGYQGQASDIDIHAKEILRMRQDLNRILASHTGQSIKRIQKDTERDYFMSAEES 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKVL R E+S
Sbjct: 181 KTYGIIDKVLYERTKTSEES 200
>gi|307692047|ref|ZP_07634284.1| ATP-dependent Clp protease proteolytic subunit [Ruminococcaceae
bacterium D16]
Length = 193
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 107/193 (55%), Positives = 148/193 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQTNRGERSYDI+SRLL +RI+F++ ++ D A+L+ AQLL+LE+++P K+I
Sbjct: 1 MSLVPYVVEQTNRGERSYDIFSRLLNDRIIFLSEEVNDTTASLVVAQLLYLESQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAGMAIYDTMQ++K +ST C+G AASMG+ LLSAG KG R ALPN+ I
Sbjct: 61 QFYINSPGGSVTAGMAIYDTMQYVKCDVSTICIGLAASMGAFLLSAGAKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPS G GQ +D+ H + + +K+R+N I +N GK+ E+V +RD+ MSA EA
Sbjct: 121 MIHQPSAGTQGQITDMALHLKRLEVVKKRMNRILAENTGKSIEQVTADCERDNFMSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D+V+ R
Sbjct: 181 LEYGLIDRVIEKR 193
>gi|313668450|ref|YP_004048734.1| endopeptidase [Neisseria lactamica ST-640]
gi|309379242|emb|CBX22199.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|313005912|emb|CBN87368.1| endopeptidase [Neisseria lactamica 020-06]
Length = 206
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAG KG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGGKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCNRDLADLERDTDRDNFMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 189 KEYGLIDQVLENRASLQ 205
>gi|194015348|ref|ZP_03053964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
gi|194012752|gb|EDW22318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
Length = 198
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 155/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ +A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+G++DKVL + ++
Sbjct: 181 LQYGLIDKVLTRNAEEQK 198
>gi|25019682|gb|AAN71768.1| ClpP2 [Synechococcus elongatus PCC 7942]
Length = 302
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 108/191 (56%), Positives = 142/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VP VVEQ+ RGER++DIYSRLL+ERIVF+ ++D +A I AQLLFLEAE+P+K+I
Sbjct: 98 AIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQ 157
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ + P ++T C G AASMG+ LLS G +G R ALP+ARI+
Sbjct: 158 LYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIM 217
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ K LN++ ++ G+ E++E DRD MS EA
Sbjct: 218 IHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAK 277
Query: 197 DWGVVDKVLMS 207
+G++D+VL
Sbjct: 278 AYGLIDQVLTR 288
>gi|91205226|ref|YP_537581.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157827437|ref|YP_001496501.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
gi|91068770|gb|ABE04492.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
RML369-C]
gi|157802741|gb|ABV79464.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia bellii
OSU 85-389]
Length = 264
Score = 236 bits (603), Expect = 1e-60, Method: Composition-based stats.
Identities = 125/202 (61%), Positives = 165/202 (81%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E + VP+V+EQT+RGER+YDIYSRLLKERI+FV G IEDHMA LI AQLLFLE
Sbjct: 52 ENFKEKYPMSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCGPIEDHMANLITAQLLFLE 111
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGS LL GEKGMR
Sbjct: 112 AENPEKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMR 171
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LP++R+++HQPSGG+ GQA+DIE HAQ+ +KIK+ LN +Y K+ G+ + VEK+++RD
Sbjct: 172 YSLPHSRVMIHQPSGGYRGQATDIEIHAQETLKIKKILNSLYSKHTGQDVKHVEKSMERD 231
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MS EA +G++DK++ R
Sbjct: 232 NFMSPEEAKKFGIIDKIITHRD 253
>gi|296446284|ref|ZP_06888230.1| Endopeptidase Clp [Methylosinus trichosporium OB3b]
gi|296256185|gb|EFH03266.1| Endopeptidase Clp [Methylosinus trichosporium OB3b]
Length = 211
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 142/210 (67%), Positives = 181/210 (86%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D +V+ L+P V+E T+RGER +DIYSRLL+ERI+F+TGQ+EDHMA++I AQLLFL
Sbjct: 1 MRDPLEVYNQYLIPQVIENTSRGERGFDIYSRLLRERIIFLTGQVEDHMASVIIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP++EI LYINSPGGVVT+G+AIYDTMQ+I+P ++T C+GQAASMGSLLL AGE G
Sbjct: 61 EAENPKREIFLYINSPGGVVTSGLAIYDTMQYIRPKVATLCIGQAASMGSLLLCAGEAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQASDI RHA+DI+KIK+RLNEIYV++ G+ YE +EKTLDR
Sbjct: 121 RFALPNARIMVHQPSGGFQGQASDILRHAEDIMKIKKRLNEIYVRHTGRDYETIEKTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
DH MSA EA D+G+VD V ++R + + ++K
Sbjct: 181 DHFMSAEEAKDFGIVDHVQVNRPEEQSETK 210
>gi|93007058|ref|YP_581495.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Psychrobacter
cryohalolentis K5]
gi|92394736|gb|ABE76011.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
cryohalolentis K5]
Length = 231
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 121/200 (60%), Positives = 160/200 (80%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ LVPMVVEQ+ RGERS+DI+SRLL+ER++F+TGQ+EDHMA LI AQLLFLEAE
Sbjct: 29 NQSATQAALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAE 88
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+I LYINSPGG V+AG+AI+DTM FIKP +ST CMG A SMGS LL+AGEKG R+A
Sbjct: 89 NPDKDIHLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYA 148
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
L NAR+++HQPSGG GQA+DIE +A++I+K + RLNEI + G+ +++EK ++RD+
Sbjct: 149 LANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYW 208
Query: 190 MSASEACDWGVVDKVLMSRI 209
+ A EA ++G++D+VL R
Sbjct: 209 LDAKEAKEYGLIDEVLERRP 228
>gi|205375127|ref|ZP_03227918.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
coahuilensis m4-4]
Length = 198
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 110/199 (55%), Positives = 154/199 (77%), Gaps = 1/199 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFLE ENP+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLETENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ+IKP + T C+G AASMG+ LL+AGE G RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQYIKPKVQTICIGMAASMGAFLLAAGEPGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ + + + DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNTILSERTGQPLDVIAQDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++DK++ R DI++K
Sbjct: 181 LEYGLIDKIIT-RHDIDKK 198
>gi|189219051|ref|YP_001939692.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
gi|189185909|gb|ACD83094.1| ATP-dependent Clp protease proteolytic subunit [Methylacidiphilum
infernorum V4]
Length = 219
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 115/202 (56%), Positives = 155/202 (76%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K + + ++PMVVEQT RGER YDI+SRLLK+RIVF+ I+D+MA L+ AQLLFL
Sbjct: 1 MKIMNSPIISQVIPMVVEQTGRGERGYDIFSRLLKDRIVFIGTPIDDNMANLVIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+ E+P+K+I+LYI+SPGG VTAGMAIYDTMQF+ ++T+C+GQAASM ++LL+AG KG
Sbjct: 61 QMEDPKKDINLYIHSPGGYVTAGMAIYDTMQFLSCDVNTYCIGQAASMAAVLLAAGTKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQP GG GQASDI AQ+I++ KR LNEI + + E +EK DR
Sbjct: 121 RFALPNARIMIHQPLGGAQGQASDISIQAQEILRTKRLLNEILSYHTKQPLERIEKDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D MSA +A +G++D+V+ ++
Sbjct: 181 DFFMSAEDAKAYGIIDEVVKTK 202
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 103/204 (50%), Positives = 153/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 QGISNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +YINSPGG V+AG+ IYDTMQ+I+P IST C+G AASMG+ LL++G KG R +LP
Sbjct: 82 ERDIYIYINSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI+R L E+ K+ G+ E+V + +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++D + R E+K
Sbjct: 202 PQEALEYGLIDAIFEKRPTPEKKD 225
>gi|161524522|ref|YP_001579534.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|189350722|ref|YP_001946350.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
multivorans ATCC 17616]
gi|221198217|ref|ZP_03571263.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|221209201|ref|ZP_03582193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|254252156|ref|ZP_04945474.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|124894765|gb|EAY68645.1| Peptidase S14 [Burkholderia dolosa AUO158]
gi|160341951|gb|ABX15037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans ATCC 17616]
gi|189334744|dbj|BAG43814.1| ATP-dependent Clp protease [Burkholderia multivorans ATCC 17616]
gi|221170939|gb|EEE03394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2]
gi|221182149|gb|EEE14550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
multivorans CGD2M]
gi|325518991|gb|EGC98514.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
TJI49]
Length = 217
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 156/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP
Sbjct: 20 EAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENP 79
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G KG RFALP
Sbjct: 80 DKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALP 139
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E + + DRD+ MS
Sbjct: 140 NSRVMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAQHTGQDVERIARDTDRDNFMS 199
Query: 192 ASEACDWGVVDKVLMSRI 209
+ +A +G++D+VL+ R
Sbjct: 200 SEDAKAYGLIDQVLLKRP 217
>gi|66515781|ref|XP_392540.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Apis mellifera]
Length = 237
Score = 236 bits (602), Expect = 1e-60, Method: Composition-based stats.
Identities = 111/210 (52%), Positives = 161/210 (76%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ +L +P+VVEQ+ RGER+YDIYSRLLKERI+ + G I D++++++ AQLLF
Sbjct: 13 VPGQKVSKRYLNFIPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSVVIAQLLF 72
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++EN + I +YINSPGG VTAG+ IYDTMQ++ PP++T+C+GQA SM SLLL+AG KG
Sbjct: 73 LQSENSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGTKG 132
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
MR +LPNARI+ HQPSGG SGQA+DI+ A +I+K+K+++N +YVK+ G E++E+ ++
Sbjct: 133 MRHSLPNARIMTHQPSGGVSGQATDIQIQALEILKLKKQINNLYVKHTGLDLEKIERCME 192
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
RD+ MS EA ++G++DKVL + +E
Sbjct: 193 RDNFMSPKEAKEFGIIDKVLSHPMQEDEPD 222
>gi|114321437|ref|YP_743120.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Alkalilimnicola ehrlichii MLHE-1]
gi|122311052|sp|Q0A6A7|CLPP_ALHEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114227831|gb|ABI57630.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Alkalilimnicola ehrlichii MLHE-1]
Length = 214
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 125/214 (58%), Positives = 163/214 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS E E GLVPMVVEQ+ RGER+YDIYSRLLKER++F+ G +EDHMA LI
Sbjct: 1 MSDERREGLAPEIEATGLVPMVVEQSARGERAYDIYSRLLKERVIFLVGPVEDHMANLIV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I +YINSPGG VTAG+AIYDTMQFIKP +ST C+GQAASMG+LLL+
Sbjct: 61 AQLLFLESENPDKDIHIYINSPGGAVTAGLAIYDTMQFIKPDVSTVCIGQAASMGALLLT 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R+ALPN+R+++HQP GGF GQA+D++ HA++I+ ++ RLN I + G+ E +
Sbjct: 121 GGTKGKRYALPNSRMMIHQPLGGFQGQATDVDIHAREILDMRDRLNRIMAHHTGQDMETI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ DRD+ MS AC++G+VD VL R +++
Sbjct: 181 ARDTDRDNFMSPDTACEYGLVDAVLADRKALDQA 214
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Staphylococcus aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|54036854|sp|P63786|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
Length = 195
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/190 (55%), Positives = 148/190 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E+++K DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVL 205
++G++D+V+
Sbjct: 181 KEYGLIDEVM 190
>gi|116243118|sp|Q1MIM7|CLPP2_RHIL3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|115256102|emb|CAK07183.1| putative ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 201
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 159/199 (79%), Positives = 183/199 (91%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLEAENP+KEI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MRFA PN+RI
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRDH M A EA
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
WGV+DKVL SR+++E +
Sbjct: 181 QSWGVIDKVLTSRLEMEGE 199
>gi|329850562|ref|ZP_08265407.1| clp protease family protein [Asticcacaulis biprosthecum C19]
gi|328840877|gb|EGF90448.1| clp protease family protein [Asticcacaulis biprosthecum C19]
Length = 208
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 126/204 (61%), Positives = 161/204 (78%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D L+P V+EQ++RGER+YDIYSR+LKERI+F+TG ED MAT ICAQLLFL
Sbjct: 1 MRDPVDNLTSYLIPTVIEQSSRGERAYDIYSRMLKERIIFLTGPFEDGMATSICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGG VT+ +AIYDTMQ+IK P++T CMG AAS GSL+L AGE G
Sbjct: 61 ESENPKKEISMYINSPGGQVTSALAIYDTMQYIKSPVTTVCMGMAASAGSLILQAGENGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPN++I++HQPSGG G ASDIE A+D+ K K+ LNEIYVK+ G+ YE +E+TLDR
Sbjct: 121 RISLPNSKIMVHQPSGGARGMASDIEIQAEDMRKTKKLLNEIYVKHTGQPYEVIERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D M+A EA ++G++D V R D
Sbjct: 181 DRYMTAEEAKEFGLIDHVYEKRAD 204
>gi|238917377|ref|YP_002930894.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
gi|259585953|sp|C4Z1T6|CLPP_EUBE2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238872737|gb|ACR72447.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
Length = 193
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 144/193 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP V+EQ +RGERSYDIYSRLLK+RI+F+ ++ D A L+ AQ+LFLEAE+P K+I
Sbjct: 1 MSFVPYVIEQNSRGERSYDIYSRLLKDRIIFLGEEVTDVSANLVVAQMLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V+AG AIYDTMQ+IK +ST C+G AASMG+ LLS G KG R ALPNA I
Sbjct: 61 HFYINSPGGSVSAGFAIYDTMQYIKCDVSTICIGMAASMGAFLLSGGAKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++I A++I+K + +LNEI N GK+ EE+ + +RD+ M+A EA
Sbjct: 121 MIHQPSGGARGQETEIRIVAENILKTRNKLNEILAANTGKSVEEISRDTERDNYMTAQEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ R
Sbjct: 181 VAYGLIDSVVEKR 193
>gi|300866516|ref|ZP_07111206.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300335473|emb|CBN56366.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 229
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 145/190 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VPMV+EQ+ GER++DIYSRLL+ERIVF+ ++D +A I AQLLFL+AE+P+K+I
Sbjct: 24 SNVVPMVLEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDI 83
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ ++P + T C G AASMG+ L++AG G R +LP++RI
Sbjct: 84 QLYINSPGGSVTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLMAAGAAGKRMSLPSSRI 143
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A++I+ KR+LNE+ + G+ E +E +RD MSA+EA
Sbjct: 144 MIHQPLGGAQGQAVDIEIQAKEILYHKRKLNELLAHHTGQPLERIEADTERDFFMSAAEA 203
Query: 196 CDWGVVDKVL 205
D+G+VD+V+
Sbjct: 204 KDYGLVDQVI 213
>gi|218672748|ref|ZP_03522417.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
GR56]
Length = 203
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 159/197 (80%), Positives = 182/197 (92%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLEAENP+KEI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MRFA PN+RI
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRDH M A EA
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
WGV+DKVL SR+++E
Sbjct: 181 QGWGVIDKVLTSRLEME 197
>gi|148652118|ref|YP_001279211.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter sp.
PRwf-1]
gi|148571202|gb|ABQ93261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Psychrobacter
sp. PRwf-1]
Length = 240
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 161/197 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMVVEQ+ RGERS+DIYSRLL+ER++F+TGQ+ED+MA LI AQ+LFLEAENP+K+I
Sbjct: 44 ALVPMVVEQSARGERSFDIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPEKDIH 103
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V+AG+A++DTM FIKP +ST CMG A SMGS LL+AG+KG R+AL N+R++
Sbjct: 104 LYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRVM 163
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DIE +A++I+KI+ RLN I + G+ E++E+ ++RD+ + A EA
Sbjct: 164 IHQPSGGAQGQATDIEINAREILKIRDRLNRILAERTGQPLEKIERDVERDYWLDAQEAK 223
Query: 197 DWGVVDKVLMSRIDIEE 213
+G+VD+VL R + +
Sbjct: 224 AYGLVDEVLERRPEEAK 240
>gi|242373003|ref|ZP_04818577.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
gi|242349329|gb|EES40930.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W1]
Length = 195
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 104/191 (54%), Positives = 147/191 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E++++ DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLM 206
+G++D+V+
Sbjct: 181 KSYGLIDEVME 191
>gi|152978444|ref|YP_001344073.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
succinogenes 130Z]
gi|171704240|sp|A6VME1|CLPP_ACTSZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|150840167|gb|ABR74138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Actinobacillus succinogenes 130Z]
Length = 194
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT+RGERSYDIYSRLLKER++F++G++ED+MA LI AQLLFLE+E+P K+I
Sbjct: 1 MALVPMVIEQTSRGERSYDIYSRLLKERVIFLSGEVEDNMANLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALPNAR+
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGAAGKRAALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ E++EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKHTLNERLAFHSGQPLEQIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D VL+ R
Sbjct: 181 QNYGLIDSVLVKRS 194
>gi|288554081|ref|YP_003426016.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
gi|288545241|gb|ADC49124.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudofirmus OF4]
Length = 195
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 111/195 (56%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL+AE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLQAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL+AGE G R ALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMNFIKPKVSTICIGMAASMGAFLLAAGEPGKRLALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE HA+ I++++ LN+I + G+ E + + DRD+ M+AS A
Sbjct: 121 MIHQPLGGTRGQASDIEIHARRIIEMRETLNKILAERTGQPLEVIARDTDRDNFMTASRA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+V+ S
Sbjct: 181 KEYGLIDEVISSPKK 195
>gi|266624421|ref|ZP_06117356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
gi|288863728|gb|EFC96026.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
hathewayi DSM 13479]
Length = 195
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T++GERSYDIYSRLLKERI+F+ ++ D A+++ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIESTSKGERSYDIYSRLLKERIIFLGEEVTDVSASIVVAQLLFLEAEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTM +IK +ST CMG AASMG+ LLS G KG RFALPNA I
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMNYIKCDVSTVCMGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A++I+KIK+RLNEI N G+ YE +E+ +RD+ M+A EA
Sbjct: 121 MIHQPSGGAQGQATEIKIVAENILKIKKRLNEILAANTGQPYEVIERDTERDNYMNAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D+++ S
Sbjct: 181 KAYGLIDEIIYS 192
>gi|146307078|ref|YP_001187543.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina ymp]
gi|166214700|sp|A4XTZ5|CLPP_PSEMY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145575279|gb|ABP84811.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudomonas
mendocina ymp]
Length = 213
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 123/210 (58%), Positives = 158/210 (75%), Gaps = 7/210 (3%)
Query: 7 AKKDSEDVFLG-------LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
++ + LVPMV+EQ+ RGER+YDIYSRLLKER++F+ GQ+ED+MA LI
Sbjct: 1 MSRNPFMQNMPEIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFLVGQVEDYMANLI 60
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
CAQLLFLEAENP K+I LYINSPGG VTAGMAIYDTMQFIK +ST C+GQA SMG+ LL
Sbjct: 61 CAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLL 120
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
+ G KG RF LPN+R+++HQP GGF GQASDIE HA++I+ I+ RLNE+ + G++ E
Sbjct: 121 AGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLET 180
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+E+ +RD+ MSA A ++G+VD V R
Sbjct: 181 IERDTNRDNFMSAPRAVEYGIVDAVHEKRQ 210
>gi|134295958|ref|YP_001119693.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia
vietnamiensis G4]
gi|166201808|sp|A4JF05|CLPP_BURVG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134139115|gb|ABO54858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
vietnamiensis G4]
Length = 217
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 156/198 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LGLVP+VVE + RGERSYDIYSRLLKER+VF+ G++ D A L+ AQLLFLE+ENP
Sbjct: 20 EAQALGLVPIVVETSGRGERSYDIYSRLLKERLVFMVGEVNDQTANLVVAQLLFLESENP 79
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG V+AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G KG RFALP
Sbjct: 80 DKDISLYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLASGAKGKRFALP 139
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RLN + ++ G+ E + + DRD+ MS
Sbjct: 140 NSRVMIHQPLGGARGQASDIEIQAREILYLKERLNNLLAQHTGQDVERIARDTDRDNFMS 199
Query: 192 ASEACDWGVVDKVLMSRI 209
+ +A +G++D+VL+ R
Sbjct: 200 SDDAKAYGLIDQVLLKRP 217
>gi|315924138|ref|ZP_07920364.1| ATP-dependent Clp protease, protease subunit [Pseudoramibacter
alactolyticus ATCC 23263]
gi|315622540|gb|EFV02495.1| ATP-dependent Clp protease, protease subunit [Pseudoramibacter
alactolyticus ATCC 23263]
Length = 194
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT RGERS+DIYSRLLKERIVF+ G+I D A+L+ AQL+FLEAENP ++I
Sbjct: 1 MNLVPMVIEQTGRGERSFDIYSRLLKERIVFLDGEITDETASLVVAQLVFLEAENPDEDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG AI DTM FIK +ST C G AASMG+ LL+AG KG R ALPNA I
Sbjct: 61 FMYINSPGGSVTAGFAIMDTMNFIKCDVSTLCYGMAASMGAFLLAAGAKGKRQALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQ+SD+E HA+ +++ K +LN I +N G+++E + K DRDH MSA EA
Sbjct: 121 MIHQPLGGAQGQSSDVEIHARHLLETKEKLNRILSENSGQSFETIVKDTDRDHFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D+V+ SR
Sbjct: 181 KTYGLIDQVITSRD 194
>gi|224475912|ref|YP_002633518.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
carnosus subsp. carnosus TM300]
gi|254763800|sp|B9DJL4|CLPP_STACT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222420519|emb|CAL27333.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus carnosus subsp. carnosus TM300]
Length = 194
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN+I + G++ E++EK DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAATHILKTRAKLNKILAERTGQSIEQIEKDTDRDNFLTADEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+
Sbjct: 181 KEYGLIDEVMQPEK 194
>gi|294627913|ref|ZP_06706492.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
gi|292597827|gb|EFF41985.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 11122]
Length = 208
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 122/198 (61%), Positives = 163/198 (82%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L LVPMVVEQT+RGER+YDIYS LLKER++F+ G I+DHMA +I AQLLFLEA+NP+
Sbjct: 5 TKALNLVPMVVEQTSRGERAYDIYSCLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPE 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+IS+YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+ALPN
Sbjct: 65 KDISIYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPN 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + + +RD+ SA
Sbjct: 125 SRVMIHQPLGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIARDTERDNFKSA 184
Query: 193 SEACDWGVVDKVLMSRID 210
+A +G+VD+VL R +
Sbjct: 185 VDAQAYGLVDQVLERRPE 202
>gi|225075320|ref|ZP_03718519.1| hypothetical protein NEIFLAOT_00323 [Neisseria flavescens
NRL30031/H210]
gi|224953495|gb|EEG34704.1| hypothetical protein NEIFLAOT_00323 [Neisseria flavescens
NRL30031/H210]
Length = 206
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPHVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP +GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLAGQASDIEIHAKELLKIKEKLNRLLAKHCDRDLADLERDTDRDNYMSADEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 189 KEYGLIDQVLENRASLQ 205
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 157/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT++GERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAE+P+K+I
Sbjct: 1 MALVPIVVEQTSKGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G KG RFALPNAR+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L ++ G+ +E+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKVL R
Sbjct: 181 MEYGLIDKVLTHRD 194
>gi|149926126|ref|ZP_01914388.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
gi|149824944|gb|EDM84156.1| ATP-dependent Clp protease proteolytic subunit [Limnobacter sp.
MED105]
Length = 215
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/198 (60%), Positives = 154/198 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VPMV+EQ+ RGER+YDIYSRLLKER++F+ G I D MA +I AQ+LFLE+ENP K+I+L
Sbjct: 18 YVPMVIEQSGRGERAYDIYSRLLKERVIFLVGPINDQMANVIVAQMLFLESENPDKDIAL 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGMAIYDTMQFIKP +ST C G AASMG+ LLS+G KG RF+LPN+RI++
Sbjct: 78 YINSPGGSVSAGMAIYDTMQFIKPDVSTLCTGLAASMGAFLLSSGTKGKRFSLPNSRIMI 137
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE HA++I+ ++ +LN I N GKT EE+ + DRD+ M A A +
Sbjct: 138 HQPLGGVQGQASDIEIHAKEILYLREKLNGILADNTGKTIEEIARDTDRDNFMGADSAKE 197
Query: 198 WGVVDKVLMSRIDIEEKS 215
+G++D VL R+ +K
Sbjct: 198 YGLIDDVLKHRVPPADKK 215
>gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|3287962|sp|P80244|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Stress protein G7
gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis]
gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis]
gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
Length = 197
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 111/197 (56%), Positives = 154/197 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL AE+P+KEI
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++DK+L D +
Sbjct: 181 LEYGLIDKILTHTEDKK 197
>gi|262374981|ref|ZP_06068215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
gi|262309994|gb|EEY91123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
lwoffii SH145]
Length = 201
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 161/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMVVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPMVVEQSSRGERSFDIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGTKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE+V + DRD+ M+A +A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYEKVARDTDRDNFMTAQQA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDEVLTKRP 201
>gi|157693854|ref|YP_001488316.1| ATP-dependent Clp protease proteolytic subunit [Bacillus pumilus
SAFR-032]
gi|167008647|sp|A8FHN9|CLPP_BACP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157682612|gb|ABV63756.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
Length = 198
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 155/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ +A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+G++DKVL + ++
Sbjct: 181 LQYGLIDKVLTRNTEEQK 198
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
Length = 198
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 110/198 (55%), Positives = 156/198 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFLEAE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++DKVL + ++
Sbjct: 181 MEYGLIDKVLTRNTEEQK 198
>gi|255647414|gb|ACU24172.1| unknown [Glycine max]
Length = 238
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 112/207 (54%), Positives = 155/207 (74%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F G + L+PMV+E ++RGER+YDI+SRLLKERI+ + G I D A ++ AQ
Sbjct: 14 FHGRKTQTQCIRSYSLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQ 73
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+EN K I++Y+NSPGG VTAG+AIYDTMQ+I+ P++T CMGQAASMGSLLL+AG
Sbjct: 74 LLFLESENSSKPINMYLNSPGGAVTAGLAIYDTMQYIRSPVNTICMGQAASMGSLLLAAG 133
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG R +LPNA I++HQPSGG+SGQA DI H + IV++ LNE+Y K+ G++ E ++
Sbjct: 134 AKGERRSLPNATIMIHQPSGGYSGQAKDIAIHTKHIVRVWDSLNELYAKHTGQSVEVIQT 193
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD+ M+ EA ++G++D+V+ R
Sbjct: 194 NMDRDNFMTPKEAKEFGLIDEVIDQRP 220
>gi|224030041|gb|ACN34096.1| unknown [Zea mays]
Length = 259
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 35 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 94
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG G R ALPNAR++
Sbjct: 95 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGERRALPNARVM 154
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI HA++I+K++ RLN+IY K+ G+ + +E+ ++RD M EA
Sbjct: 155 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAH 214
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ R
Sbjct: 215 DWGLIDEVIEHRP 227
>gi|189424987|ref|YP_001952164.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
lovleyi SZ]
gi|226706453|sp|B3E1Z4|CLPP_GEOLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189421246|gb|ACD95644.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
lovleyi SZ]
Length = 197
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 155/193 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VPMVVEQ+ RGER+YDIYSRLLKERIVF+ G+I D +A L+ AQLLFLEAE+P K+I L
Sbjct: 2 YVPMVVEQSGRGERAYDIYSRLLKERIVFLGGEINDQVADLVIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAI+DTM +IK P+ST C+GQAASMG++LL+AGEKG RFALP+ARI++
Sbjct: 62 YINSPGGVVTAGMAIFDTMNYIKAPVSTICIGQAASMGAVLLTAGEKGKRFALPHARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQA+DI A++I+++KR LN + G+ E +E+ +RD MSA EA +
Sbjct: 122 HQPSGGSRGQATDIMIQAEEILRMKRELNRLLADLSGQPVERLEQDTERDFFMSAEEARN 181
Query: 198 WGVVDKVLMSRID 210
+G++D V+ R D
Sbjct: 182 YGLIDAVMTRRPD 194
>gi|217072528|gb|ACJ84624.1| unknown [Medicago truncatula]
Length = 238
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 154/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERIV + G I D A ++ AQLLFLE+ENP K I+
Sbjct: 28 SLIPMVIETSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIN 87
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ PI+T C+GQAASMGSLLL AG KG R ALPNA I+
Sbjct: 88 MYLNSPGGAVTAGLAIYDTMQYIRSPINTICLGQAASMGSLLLCAGAKGQRRALPNATIM 147
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA DI H + IV++ LNE+YVK+ G+ + ++K +DRD+ M+A EA
Sbjct: 148 IHQPSGGYSGQAKDIAIHTKQIVRMWDALNELYVKHTGQPLDVIQKNMDRDYFMTAEEAK 207
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 208 EFGIIDEVIDQRP 220
>gi|170720927|ref|YP_001748615.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
W619]
gi|325274289|ref|ZP_08140400.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
gi|226706466|sp|B1J692|CLPP_PSEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169758930|gb|ACA72246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida W619]
gi|324100572|gb|EGB98307.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas sp.
TJI-51]
Length = 213
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQ+LFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG KG R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DIE HAQ+I+ IK RLNE+ + G+ E +++ +RD+ MSAS A
Sbjct: 138 IHQPLGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAA 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V R
Sbjct: 198 EYGLIDSVYDKRQ 210
>gi|242062408|ref|XP_002452493.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
gi|241932324|gb|EES05469.1| hypothetical protein SORBIDRAFT_04g026880 [Sorghum bicolor]
Length = 309
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 83 GLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVH 142
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 143 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 202
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ + +++E+ ++RD M EA
Sbjct: 203 IHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEAR 262
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 263 DWGLIDEVIENRP 275
>gi|195645066|gb|ACG42001.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 76 GLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVH 135
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 136 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 195
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ + +++E+ ++RD M EA
Sbjct: 196 IHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEAR 255
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 256 DWGLIDEVIENRP 268
>gi|226491764|ref|NP_001150643.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|195640820|gb|ACG39878.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 302
Score = 236 bits (602), Expect = 2e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 76 GLVPMVIETTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVH 135
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 136 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 195
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ + +++E+ ++RD M EA
Sbjct: 196 IHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEAR 255
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 256 DWGLIDEVIENRP 268
>gi|255002920|ref|ZP_05277884.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Puerto Rico]
gi|255004048|ref|ZP_05278849.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Virginia]
Length = 198
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 137/193 (70%), Positives = 175/193 (90%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG +ED+MA+LI AQL+FLEAENP+K+I
Sbjct: 1 MNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMG+LLL+ GE GMR+ALPN+RI
Sbjct: 61 SLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I++IKRRLNEIYVK+ GK+ EE+E +++RD+ M A +A
Sbjct: 121 MVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMVAEKA 180
Query: 196 CDWGVVDKVLMSR 208
D+G+VDKV+ R
Sbjct: 181 KDFGIVDKVIDKR 193
>gi|167032910|ref|YP_001668141.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas putida
GB-1]
gi|189082463|sp|B0KJG6|CLPP_PSEPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166859398|gb|ABY97805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
putida GB-1]
Length = 213
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQ+LFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQMLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG KG R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLTAGAKGKRHCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DI+ HAQ+I+ IK RLNE+ + G+ E +++ +RD+ MSAS A
Sbjct: 138 IHQPLGGFQGQATDIQIHAQEILSIKARLNELLAYHTGQDLETIQRDTERDNFMSASRAA 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V R
Sbjct: 198 EYGLIDSVYDKRQ 210
>gi|284097335|ref|ZP_06385465.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
gi|283831154|gb|EFC35134.1| Peptidase S14, ClpP [Candidatus Poribacteria sp. WGA-A3]
Length = 203
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 161/193 (83%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMV+E TNRGER+YDIYSRLLK+RI+F+ I+D + LI AQLLFLEAE+P+K+I+L
Sbjct: 2 LIPMVIESTNRGERAYDIYSRLLKDRIIFLGAPIDDIFSNLIIAQLLFLEAEDPEKDINL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM IYDTMQ++KPPI+T C+GQAASMG+LLL+AG +G R ALPNAR+++
Sbjct: 62 YINSPGGSVTAGMGIYDTMQYVKPPITTICLGQAASMGALLLAAGTQGKRHALPNARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA++I+ HA++I+KI+ RLN+I ++ G+ E++ + +RD+ MS +EA D
Sbjct: 122 HQPMGGFQGQATEIDIHAREILKIRERLNQILSEHTGQALEKISQDTERDYFMSGTEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D+V++ +
Sbjct: 182 YGLIDEVIVRASE 194
>gi|226501814|ref|NP_001150578.1| LOC100284211 [Zea mays]
gi|195640324|gb|ACG39630.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 260
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 36 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG G R ALPNAR++
Sbjct: 96 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGASGQRRALPNARVM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI HA++I+K++ RLN+IY K+ G+ + +E+ ++RD M EA
Sbjct: 156 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPEEAH 215
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ R
Sbjct: 216 DWGLIDEVIEHRP 228
>gi|254994793|ref|ZP_05276983.1| ATP-dependent Clp protease proteolytic subunit [Anaplasma marginale
str. Mississippi]
Length = 207
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 138/197 (70%), Positives = 176/197 (89%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG +ED+MA+LI AQL+FLEAENP
Sbjct: 6 EREIMNLVPMVVEQTSRGERAYDIYSRLLKERIIFITGTVEDNMASLIVAQLVFLEAENP 65
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMG+LLL+ GE GMR+ALP
Sbjct: 66 EKDISLYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGALLLAGGEPGMRYALP 125
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGGF GQA+DIE HA++I++IKRRLNEIYVK+ GK+ EE+E +++RD+ M
Sbjct: 126 NSRIMVHQPSGGFRGQATDIEIHAREILEIKRRLNEIYVKHTGKSLEEIESSMERDNFMV 185
Query: 192 ASEACDWGVVDKVLMSR 208
A +A D+G+VDKV+ R
Sbjct: 186 AEKAKDFGIVDKVIDKR 202
>gi|289551370|ref|YP_003472274.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315658877|ref|ZP_07911744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
gi|289180901|gb|ADC88146.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis HKU09-01]
gi|315496001|gb|EFU84329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
lugdunensis M23590]
Length = 195
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 146/195 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E+++K DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEQIQKDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+V+
Sbjct: 181 KAYGLIDEVMEPEDK 195
>gi|227486247|ref|ZP_03916563.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
gi|227235658|gb|EEI85673.1| endopeptidase Clp [Anaerococcus lactolyticus ATCC 51172]
Length = 205
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 119/204 (58%), Positives = 155/204 (75%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
K D+ LVP V+EQTNRGER+YDIYSRLLK+RI+F++G++ D ++ +I AQLLF
Sbjct: 2 PQKGDTVLAKNYLVPTVIEQTNRGERAYDIYSRLLKDRIIFLSGEVRDEVSDIIIAQLLF 61
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+E+P K+I YINSPGGVVT+G+AIYDTM +IKP +ST C+GQAASMG++LLS+G KG
Sbjct: 62 LESEDPNKDIHFYINSPGGVVTSGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKG 121
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF+LPN+ I++HQPSGG GQASDI A+ I+KIK LN I +N GK +EK D
Sbjct: 122 KRFSLPNSNIMIHQPSGGAQGQASDIVIQAEQILKIKANLNRILSENTGKDLATIEKDTD 181
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD M+A EA +G++DKV+ S
Sbjct: 182 RDFAMTAEEALKYGLIDKVIESNK 205
>gi|304391391|ref|ZP_07373333.1| Clp protease [Ahrensia sp. R2A130]
gi|303295620|gb|EFL89978.1| Clp protease [Ahrensia sp. R2A130]
Length = 212
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 146/208 (70%), Positives = 178/208 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + LVPMVVEQTNRGER+YDI+SRLLKERI+F+TG IED M+ L+CAQLLFLE
Sbjct: 1 MQDPIQTAMNLVPMVVEQTNRGERAYDIFSRLLKERIIFITGPIEDGMSVLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVTAGMAIYDTMQFIKPP++T CMGQA SMGSLLL+AGEK MR
Sbjct: 61 AENPKKEISLYINSPGGVVTAGMAIYDTMQFIKPPVATLCMGQACSMGSLLLTAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LP AR++LHQPSGG G+ SDIER+ DI+K+K+RLN+IYVK+ G+ E +E+TLDRD
Sbjct: 121 FILPQARVMLHQPSGGMQGKVSDIERNYTDIIKVKQRLNDIYVKHTGQDLETIERTLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKS 215
H M+A E+ ++GVVDKV+ SR +IE ++
Sbjct: 181 HFMNAEESVEFGVVDKVIASRDEIEGEA 208
>gi|60389777|sp|Q891J7|CLPP_CLOTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 194
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 116/194 (59%), Positives = 155/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDIYSRLLK+RI+ ++ Q+ D A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPVVVEQTNRGERSYDIYSRLLKDRIIMLSDQVNDVTASLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI HA I+KIK+ LN I + G+ E +++ +RD+ M A++A
Sbjct: 121 MIHQPLGGFQGQATDIGIHADRILKIKQNLNSILSEKTGQPLEVIQRDTERDNFMDANQA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+V++ +
Sbjct: 181 KDYGLIDEVMVKKK 194
>gi|56695904|ref|YP_166255.1| ATP-dependent Clp protease proteolytic subunit [Ruegeria pomeroyi
DSS-3]
gi|67460175|sp|Q5LUQ0|CLPP_SILPO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56677641|gb|AAV94307.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruegeria
pomeroyi DSS-3]
Length = 209
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 131/207 (63%), Positives = 166/207 (80%), Gaps = 1/207 (0%)
Query: 10 DSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D D ++ LVPMVVEQT+RGER+YDI+SRLLKERI+F+ G I D M+ LI AQLL LEA
Sbjct: 3 DPVDTYMNTLVPMVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLIVAQLLHLEA 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP KEIS+YINSPGGVVT+G++IYDTMQ+IKP ST +GQAASMGS+LL+ GEKGMRF
Sbjct: 63 ENPNKEISIYINSPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRF 122
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPN+RI++HQPSGG+ GQASDI HA + K+K RL +IYVK+ G+T + VEK LDRD+
Sbjct: 123 SLPNSRIMVHQPSGGYQGQASDIMIHAAETQKLKDRLYDIYVKHTGQTKKAVEKALDRDN 182
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
MS EA +WG +D+++ SR ++
Sbjct: 183 FMSPEEAKEWGHIDEIVESRSKGDDAE 209
>gi|303248988|ref|ZP_07335234.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
gi|302489637|gb|EFL49575.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
fructosovorans JJ]
Length = 204
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 117/200 (58%), Positives = 158/200 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+E T R ER+YDIYSRLLK+RI+ + ++D++A LICAQLLFLE+E+P+KEI
Sbjct: 1 MTTVPIVIETTGRSERAYDIYSRLLKDRIILLGSAVDDYVANLICAQLLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGGVV+AG+AIYDTMQ++ PP+ST CMGQAASMG+LLL AG G R+ALP++RI
Sbjct: 61 SLYINSPGGVVSAGLAIYDTMQYVMPPVSTLCMGQAASMGALLLCAGATGTRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++ + + LNEI K+ G+ E+++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGFQGQATDIEIHARETRRTREALNEIMAKHTGQPIEKIQVDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G+VDKV SR + +
Sbjct: 181 VAYGLVDKVFASREPVAKTE 200
>gi|283852376|ref|ZP_06369646.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
gi|283572224|gb|EFC20214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. FW1012B]
Length = 204
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 115/200 (57%), Positives = 159/200 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+V+E T R ER+YDIYSRLL++RI+ + ++DH+A LICAQLLFLE+E+P+KEI
Sbjct: 1 MPTIPIVIETTGRSERAYDIYSRLLRDRIILLGSAVDDHVANLICAQLLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+AIYDTMQ++ P +ST CMGQAASMG+LLL AG GMR+ALP++RI
Sbjct: 61 FMYINSPGGSVTAGLAIYDTMQYVLPKVSTLCMGQAASMGALLLCAGATGMRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI+ HA++I++I+ LNEI ++ G+ E+V DRD+ M+A EA
Sbjct: 121 MIHQPMGGFQGQATDIDIHAREILRIRESLNEIMARHTGQDIEKVRVDTDRDYFMNADEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKVL SR + +K
Sbjct: 181 VTYGLIDKVLTSREPVAKKE 200
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
gi|90101407|sp|Q30Z79|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfovibrio
desulfuricans subsp. desulfuricans str. G20]
Length = 200
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 116/198 (58%), Positives = 161/198 (81%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PMV+E T R ER+YDIYSRLLK+RI+ + ++D++A+LICAQLLFLE+ENP+KEI LY
Sbjct: 3 IPMVIESTGRAERAYDIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPEKEIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGVVTAG+AIYDTMQ+I P++T CMGQAASMG+ LL+AG+ GMRFALPN+RI++H
Sbjct: 63 INSPGGVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DI+ A++I+++K RLNEI ++ G+ E++ + DRD+ M A ++
Sbjct: 123 QPMGGAQGQATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGPENAKNF 182
Query: 199 GVVDKVLMSRIDIEEKSK 216
G++D++L SR D+E+ K
Sbjct: 183 GIIDRILTSRKDVEKDGK 200
>gi|222150769|ref|YP_002559922.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 107/190 (56%), Positives = 147/190 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIESTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K + +LN I + G+ E++EK DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEA 180
Query: 196 CDWGVVDKVL 205
+G++D+V+
Sbjct: 181 KAYGLIDEVM 190
>gi|166031009|ref|ZP_02233838.1| hypothetical protein DORFOR_00690 [Dorea formicigenerans ATCC
27755]
gi|166029276|gb|EDR48033.1| hypothetical protein DORFOR_00690 [Dorea formicigenerans ATCC
27755]
Length = 193
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 147/193 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT+RGERSYDIYSRLLK+RI+F ++ D A++ AQLLFLEAE+P+K+I
Sbjct: 1 MSLVPYVIEQTSRGERSYDIYSRLLKDRIIFFGEEVTDASASVAIAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+IK I T C+G AASMGS LL+ G KG R ALPN+ I
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIKCDIETICIGMAASMGSFLLAGGTKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A+ I+K + RLN I +N G+ E + + DRD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKTRERLNRILAENTGQPLEVISRETDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D+V+ R
Sbjct: 181 KAFGLIDEVITRR 193
>gi|71066496|ref|YP_265223.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter
arcticus 273-4]
gi|110816464|sp|Q4FQB9|CLPP_PSYA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71039481|gb|AAZ19789.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
arcticus 273-4]
Length = 225
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 121/199 (60%), Positives = 160/199 (80%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
LVPMVVEQ+ RGERS+DI+SRLL+ER++F+TGQ+EDHMA LI AQLLFLEAEN
Sbjct: 24 QSTTQSALVPMVVEQSARGERSFDIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAEN 83
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG V+AG+AI+DTM FIKP +ST CMG A SMGS LL+AG+KG R+AL
Sbjct: 84 PDKDIHLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGQKGKRYAL 143
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
NAR+++HQPSGG GQA+DIE +A++I+K + RLNEI + G++ E++EK ++RD+ +
Sbjct: 144 ANARVMIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQSVEKIEKDVERDYWL 203
Query: 191 SASEACDWGVVDKVLMSRI 209
A EA ++G++D+VL R
Sbjct: 204 DAKEAKEYGLIDEVLERRP 222
>gi|186681335|ref|YP_001864531.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186463787|gb|ACC79588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 232
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 143/199 (71%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ +VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D +A I AQLLFL++
Sbjct: 20 NSQLNSPSNIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDAVANSIVAQLLFLDS 79
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+ +K+I +Y+NSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG G R
Sbjct: 80 EDSEKDIQMYVNSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGAAGKRM 139
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LP++RI++HQP GG GQA DIE A++I+ +K +LN++ + G+ E +E +RD
Sbjct: 140 SLPDSRIMIHQPLGGAQGQAIDIEIQAREILYVKAKLNQLMSHHTGQPLERIEADTERDF 199
Query: 189 IMSASEACDWGVVDKVLMS 207
MSA EA ++G++D+V+
Sbjct: 200 FMSAEEAKNYGLIDQVISR 218
>gi|262198158|ref|YP_003269367.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
gi|262081505|gb|ACY17474.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haliangium
ochraceum DSM 14365]
Length = 207
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 102/202 (50%), Positives = 155/202 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
E + ++P V+EQT+RGER +DI+SRLLKE IVF+ ++D +A +I AQLL LE
Sbjct: 1 MNSKERITNWMIPTVIEQTHRGERGWDIFSRLLKEGIVFLGTPVDDAVANVIIAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+P+K+I LYINSPGG VTAG+AIYDTMQ+++ ++T CMGQA+SMG+ LL+AG KG R
Sbjct: 61 SEDPEKDIMLYINSPGGSVTAGLAIYDTMQYLRCDVATICMGQASSMGAFLLAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALP+AR+++HQP GGFSG A+DI+ +A++++K + LN + ++ G+ + + + +RD
Sbjct: 121 FALPHARVMIHQPLGGFSGPATDIDIYAREVLKTRETLNRVLAEHTGQPLDRIAEDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA EAC +G++D+V++ +
Sbjct: 181 YFMSADEACAYGLIDEVIVKKK 202
>gi|18310375|ref|NP_562309.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110799833|ref|YP_696088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens ATCC 13124]
gi|110803073|ref|YP_698704.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens SM101]
gi|168207806|ref|ZP_02633811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|168212102|ref|ZP_02637727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|168215325|ref|ZP_02640950.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|168217824|ref|ZP_02643449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
gi|169342288|ref|ZP_02863366.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|182627116|ref|ZP_02954834.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|21759067|sp|Q8XKK1|CLPP_CLOPE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123146116|sp|Q0ST53|CLPP_CLOPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|123148745|sp|Q0TQK2|CLPP_CLOP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18145055|dbj|BAB81099.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
perfringens str. 13]
gi|110674480|gb|ABG83467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens ATCC 13124]
gi|110683574|gb|ABG86944.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens SM101]
gi|169299615|gb|EDS81674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens C str. JGS1495]
gi|170660863|gb|EDT13546.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens E str. JGS1987]
gi|170709986|gb|EDT22168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens B str. ATCC 3626]
gi|170713287|gb|EDT25469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens CPE str. F4969]
gi|177907505|gb|EDT70163.1| CAAX amino terminal protease family protein [Clostridium
perfringens D str. JGS1721]
gi|182380151|gb|EDT77630.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
perfringens NCTC 8239]
Length = 194
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 115/194 (59%), Positives = 157/194 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT++GERSYDI+SRLLK+RI+ ++G++ D A L+ AQLLFLE+E+P K+
Sbjct: 1 MSNLVPMVVEQTSKGERSYDIFSRLLKDRIIMLSGEVNDVTANLVVAQLLFLESEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +T+GMAIYDTMQ+IKP +ST C+G AASMG+ LLS+G KG RFALPNA
Sbjct: 61 IHLYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFALPNAE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GGF GQA+DI+ HA+ I+KIK +LN+I +N + E+++ ++RD+ M ASE
Sbjct: 121 IMIHQPLGGFQGQATDIDIHAKRILKIKDKLNQILSENTNQPLEKIKVDVERDYFMEASE 180
Query: 195 ACDWGVVDKVLMSR 208
A ++G++DKV+ +
Sbjct: 181 AVEYGLIDKVIERK 194
>gi|306820816|ref|ZP_07454440.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
gi|304551134|gb|EFM39101.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium yurii
subsp. margaretiae ATCC 43715]
Length = 195
Score = 236 bits (601), Expect = 2e-60, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQT+RGERSYDIYSRLLKERI+F+ ++ D A+LI AQLLFLE+E+P K+I
Sbjct: 1 MAFIPYVIEQTSRGERSYDIYSRLLKERIIFLGDEVNDQTASLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +TAGMAIYDTMQ IKP +ST C+G AASMG+ LLS+G+KG R+ALPN+ I
Sbjct: 61 HFYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLSSGKKGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I++++++LNEI + GK+ E + K +RD MSA EA
Sbjct: 121 MIHQPLGGTKGQATDIQIHAERIIRLRKKLNEIMAEQTGKSIEIINKDTERDFFMSAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
D+G++D V++ R
Sbjct: 181 KDYGLIDSVMLGRGK 195
>gi|330829918|ref|YP_004392870.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
B565]
gi|328805054|gb|AEB50253.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas veronii
B565]
Length = 207
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 156/201 (77%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
++ LVP+VVEQT +GERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+
Sbjct: 7 DMTDSPSNALVPIVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLES 66
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP K+I +YINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G KG RF
Sbjct: 67 ENPDKDIYIYINSPGGSVTAGMSIYDTMQFIKPDVSTVCMGQACSMGAFLLAGGAKGKRF 126
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LPNAR+++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ +E+ DRD+
Sbjct: 127 CLPNARVMIHQPLGGFQGQASDIQIHAQEILKIKNTLNERLAFHTGQDMATIERDTDRDN 186
Query: 189 IMSASEACDWGVVDKVLMSRI 209
MSA +A +G+VD VL R
Sbjct: 187 FMSAEQAVAYGLVDGVLSQRS 207
>gi|149194680|ref|ZP_01871775.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
gi|149135103|gb|EDM23584.1| ATP-dependent Clp protease proteolytic subunit [Caminibacter
mediatlanticus TB-2]
Length = 196
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 120/195 (61%), Positives = 156/195 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E+T RGER+YDIYSRLLK+RI+ + G+I DH A+LI AQLLFLEAENP+K+
Sbjct: 1 MSILIPTVIEKTGRGERAYDIYSRLLKDRIIMLQGEINDHTASLIVAQLLFLEAENPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+G AIYDTM +IKP + T CMGQAASMG+ LLS+G KG RFALP+AR
Sbjct: 61 IYLYINSPGGVVTSGFAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE HA++I+++K+ LN+I +N G++ ++EK +RD MSA E
Sbjct: 121 IMIHQPLGGAQGQATDIEIHAKEILRMKKELNKILAENTGQSVRKIEKDTERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKVL R
Sbjct: 181 AMKYGLIDKVLKKRE 195
>gi|319955770|ref|YP_004167033.1| ATP-dependent clp protease proteolytic subunit clpp [Nitratifractor
salsuginis DSM 16511]
gi|319418174|gb|ADV45284.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nitratifractor
salsuginis DSM 16511]
Length = 196
Score = 235 bits (600), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/192 (55%), Positives = 152/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQT RGERSYDIYSRLLK+RI+ ++G++ D +A+ I AQLLFLEA++P K+I
Sbjct: 1 MSYIPYVIEQTGRGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQLLFLEAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGV+T+G +IYDTM +IKP +ST C+GQAASMG+ LL+ G +G R+ALP++RI
Sbjct: 61 YFYINSPGGVITSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLACGAEGKRYALPSSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A++I+++K LN+I + GK+ +++EK +RD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATDIAIQAKEILRMKTYLNKILAEKTGKSVKKIEKDTERDYFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKVL
Sbjct: 181 QEYGLIDKVLTK 192
>gi|225714260|gb|ACO12976.1| ATP-dependent Clp protease proteolytic subunit, mitochondrial
precursor [Lepeophtheirus salmonis]
Length = 222
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 120/206 (58%), Positives = 161/206 (78%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ LVP+VVEQT RGERSYDIYSRLLK+RI+ + GQ++D ++ L+ AQLL
Sbjct: 12 NGPMRAEARSMSRLVPIVVEQTGRGERSYDIYSRLLKDRIICLMGQVDDVISGLMVAQLL 71
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FL+AE+ +K I +YINSPGG VTAG+AIYDTMQ+I+PPI+T+C+GQA SMGSLLL+AG K
Sbjct: 72 FLQAESGKKPIHMYINSPGGSVTAGLAIYDTMQYIQPPIATWCVGQACSMGSLLLTAGTK 131
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
GMR +LPN+RI++HQPSG GQASDI+ AQ+I+ ++ RLN IYVK+ G+ + VEK++
Sbjct: 132 GMRHSLPNSRIMVHQPSGQSHGQASDIQIQAQEILNLRARLNNIYVKHTGQPLDIVEKSM 191
Query: 185 DRDHIMSASEACDWGVVDKVLMSRID 210
DRD+ MSA +A +G++DKVL +
Sbjct: 192 DRDNFMSADDALKFGLIDKVLETPPK 217
>gi|206602656|gb|EDZ39137.1| Peptidase S14, ClpP [Leptospirillum sp. Group II '5-way CG']
Length = 203
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 116/190 (61%), Positives = 153/190 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+P VVEQT RGERSYDIYSRLLK+RI+F+ I+D +A L+ AQLLFLEAE+ K+I+L
Sbjct: 2 LIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMG++LL+AG G RFALPNARI++
Sbjct: 62 YINSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRFALPNARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++IE HA++I+K++ LN I K+ ++ +V + DRD+ +SA +A
Sbjct: 122 HQPLGGVQGQATEIEIHAREILKMREHLNGILAKHTKQSLAKVAQDTDRDYFLSAEDAKA 181
Query: 198 WGVVDKVLMS 207
+G+VD V+ S
Sbjct: 182 YGLVDSVISS 191
>gi|226529931|ref|NP_001141255.1| hypothetical protein LOC100273342 [Zea mays]
gi|194703568|gb|ACF85868.1| unknown [Zea mays]
Length = 304
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 76 GLVPMVIETTSRGERAYDIFSRLLKERIVCINGPIADDTASLVVAQLLFLESENPLKPVH 135
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 136 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 195
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ + +++E+ ++RD M EA
Sbjct: 196 IHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPDEAR 255
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 256 DWGLIDEVIENRP 268
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 157/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT++GERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAE+P+K+I
Sbjct: 1 MALVPIVVEQTSKGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G KG RFALPNAR+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L ++ G+ +E+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKVL R
Sbjct: 181 MEYGLIDKVLTHRD 194
>gi|66044992|ref|YP_234833.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae B728a]
gi|71733685|ref|YP_273935.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|237803596|ref|ZP_04591181.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|257483815|ref|ZP_05637856.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|289627504|ref|ZP_06460458.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. NCPPB3681]
gi|289649945|ref|ZP_06481288.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 2250]
gi|289679415|ref|ZP_06500305.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae FF5]
gi|298486263|ref|ZP_07004326.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|301384120|ref|ZP_07232538.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato Max13]
gi|302059517|ref|ZP_07251058.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato K40]
gi|302135032|ref|ZP_07261022.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|302187983|ref|ZP_07264656.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. syringae 642]
gi|38257468|sp|Q87YR6|CLPP_PSESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|81308384|sp|Q4ZVM7|CLPP_PSEU2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110816461|sp|Q48KZ0|CLPP_PSE14 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|63255699|gb|AAY36795.1| Peptidase S14, ClpP [Pseudomonas syringae pv. syringae B728a]
gi|71554238|gb|AAZ33449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159270|gb|EFI00328.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
savastanoi pv. savastanoi NCPPB 3335]
gi|320325361|gb|EFW81428.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. B076]
gi|320327654|gb|EFW83662.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868375|gb|EGH03084.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330878772|gb|EGH12921.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. morsprunorum str. M302280PT]
gi|330882125|gb|EGH16274.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330889997|gb|EGH22658.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. mori str. 301020]
gi|330897794|gb|EGH29213.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. japonica str. M301072PT]
gi|330939706|gb|EGH43001.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330952797|gb|EGH53057.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae Cit 7]
gi|330959387|gb|EGH59647.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330963320|gb|EGH63580.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330972589|gb|EGH72655.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aceris str. M302273PT]
gi|330985639|gb|EGH83742.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331012679|gb|EGH92735.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. tabaci ATCC 11528]
gi|331019229|gb|EGH99285.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. lachrymans str. M302278PT]
gi|331025578|gb|EGI05634.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 213
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 154/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LI AQLLFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+ G +G R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDI+ HA++I+ I+ RLN + + G++ E +E+ +RD+ MSA A
Sbjct: 138 IHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAA 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 198 EYGLIDSVINKRQ 210
>gi|254421111|ref|ZP_05034835.1| Clp protease [Brevundimonas sp. BAL3]
gi|196187288|gb|EDX82264.1| Clp protease [Brevundimonas sp. BAL3]
Length = 215
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 138/206 (66%), Positives = 167/206 (81%), Gaps = 1/206 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D ++ + LVPMVVEQ++RGERS+DI+SRLL+ERI+F+TG ED MA+LICAQLLFL
Sbjct: 1 MRDPIELMNMNLVPMVVEQSSRGERSFDIFSRLLRERIIFLTGPFEDTMASLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGG V++ +AIYDTMQ+IK P+ST MG AAS GSL+L+AG G
Sbjct: 61 ESENPKKEISMYINSPGGQVSSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGAAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNARI++HQPSGGF GQASDIE HA DI K+RLNEIYV + G+TYEEVEKTLDR
Sbjct: 121 RIALPNARIMVHQPSGGFRGQASDIELHAADIRYTKKRLNEIYVHHTGRTYEEVEKTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
DH MSA EA WG+VD V R +
Sbjct: 181 DHFMSAEEAKAWGIVDHVYDKREQAD 206
>gi|218514228|ref|ZP_03511068.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
8C-3]
Length = 201
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 159/199 (79%), Positives = 183/199 (91%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLEAENP+KEI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MRFA PN+RI
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRDH M A EA
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMDADEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
WGV+DKVL SR+++E +
Sbjct: 181 QGWGVIDKVLTSRLEMEGE 199
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 143/192 (74%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL++RIVF+ ++ + +A LI AQLLFLE+E+P K+I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LL+AG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN+ G+ E++ + +RD MSA EA D
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAKD 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVINRRP 192
>gi|317130215|ref|YP_004096497.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
cellulosilyticus DSM 2522]
gi|315475163|gb|ADU31766.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cellulosilyticus DSM 2522]
Length = 195
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL A++P+K+I
Sbjct: 1 MNLVPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAADDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAI+DTMQFI+P + T C+G AASMG+ LL+AGE G RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIFDTMQFIQPKVQTICIGMAASMGAFLLAAGEPGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA+ IV+++ +LNEI + G+ E + + DRD+ M++ EA
Sbjct: 121 MIHQPLGGAQGQAADIEIHAKRIVQMREKLNEILAERTGQPIEVIARDTDRDNFMTSFEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+V+ + +
Sbjct: 181 KKYGLIDEVMEKKPE 195
>gi|295401529|ref|ZP_06811498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|312109546|ref|YP_003987862.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
gi|294976441|gb|EFG52050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
thermoglucosidasius C56-YS93]
gi|311214647|gb|ADP73251.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y4.1MC1]
Length = 196
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D +A I +QLLFL AE+P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIILGSPIDDQVANSIVSQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAG+AIYDTMQFIKP +ST C+G AASMG+ LL+AG KG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ + +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIDVIERDTDRDNFMTAQKA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL +
Sbjct: 181 QEYGIIDRVLTRVDE 195
>gi|167628597|ref|YP_001679096.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
gi|167591337|gb|ABZ83085.1| ATP-dependent clp protease proteolytic subunit [Heliobacterium
modesticaldum Ice1]
Length = 199
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 113/198 (57%), Positives = 148/198 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQTNRGER+YDIYSRLLK+RI+ + I+D++A LI AQLLFLEAE+P K+
Sbjct: 1 MSYLVPMVVEQTNRGERAYDIYSRLLKDRIIILGSAIDDNVANLIIAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +T+G AIYDTMQ I+ +ST C+G AASMG+ LL+AG KG R+A PNA
Sbjct: 61 IHLYINSPGGAITSGFAIYDTMQLIRCDVSTICVGMAASMGAFLLAAGAKGKRYASPNAE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA++IE HA+ I+K + RLN+I G+ E +E+ DRD+ MSA E
Sbjct: 121 IMIHQPLGGVKGQATEIEIHARHILKTRDRLNKILADRTGQPLERIERDTDRDYFMSAEE 180
Query: 195 ACDWGVVDKVLMSRIDIE 212
A +G++D V+ + +
Sbjct: 181 AKAYGIIDGVMEFKSPAK 198
>gi|152989915|ref|YP_001355637.1| ATP-dependent Clp protease proteolytic subunit [Nitratiruptor sp.
SB155-2]
gi|166201830|sp|A6Q1C1|CLPP_NITSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151421776|dbj|BAF69280.1| ATP-dependent Clp protease, proteolytic subunit [Nitratiruptor sp.
SB155-2]
Length = 196
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 155/193 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P V+E+T RGERSYDIYSRLLK+RI+ ++G+I D +A+ I AQLLFLEAE+P K+
Sbjct: 1 MSYYIPYVIERTGRGERSYDIYSRLLKDRIIMLSGEINDAVASSIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+GM+IYDTM +IKP +ST C+GQAASMG+ LLS+G KG R+ALP+AR
Sbjct: 61 IYLYINSPGGVITSGMSIYDTMNYIKPDVSTICIGQAASMGAFLLSSGTKGKRYALPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K+ LNEI +N G++ +++ K +RD MS+ E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAKEILRLKKILNEILAENTGQSVKKIAKDTERDFFMSSEE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++D+VL
Sbjct: 181 AKEYGLIDQVLEK 193
>gi|149923964|ref|ZP_01912350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
gi|149815196|gb|EDM74745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Plesiocystis
pacifica SIR-1]
Length = 217
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 154/192 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQT+RGERS+DIYSRLLK+RIVF+ I D +A++I AQLLFLE+E+P K+I LY
Sbjct: 13 IPFVVEQTHRGERSWDIYSRLLKDRIVFLGDPINDRVASIIIAQLLFLESEDPDKDIRLY 72
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGVVTAG+ IYDTMQ+++ ++T+C+GQAASMG+ LL+ G KG RFALPNARI++H
Sbjct: 73 INSPGGVVTAGLGIYDTMQYVRCDVATYCLGQAASMGAFLLAGGAKGKRFALPNARIMIH 132
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG SGQA+DIE A++I+++K +LNEI ++ G+T +E+ DRD+ M A EA +
Sbjct: 133 QPHGGASGQATDIEIQAREILRLKAKLNEIMARHSGRTVDEILADTDRDNFMGADEAKKY 192
Query: 199 GVVDKVLMSRID 210
G++D+VL +
Sbjct: 193 GLIDEVLRRSEE 204
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|116270726|sp|Q1DAT0|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 206
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 119/205 (58%), Positives = 164/205 (80%), Gaps = 4/205 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
F+ VP V+EQT+RGERSYDIYSRLLK+RIV + +I+D +A +I AQLLFLE+E+P K+
Sbjct: 3 FMP-VPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKD 61
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG++LL AG KG R+ALP++R
Sbjct: 62 INLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSR 121
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K +LNE+ VK+ G++ E VEK DRD+ M ASE
Sbjct: 122 IMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASE 181
Query: 195 ACDWGVVDKVLMSRIDI---EEKSK 216
A +G++D++ R + +E+ K
Sbjct: 182 AKAYGIIDEIQNPRKVVGLGKEEKK 206
>gi|281356561|ref|ZP_06243052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Victivallis
vadensis ATCC BAA-548]
gi|281316688|gb|EFB00711.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Victivallis
vadensis ATCC BAA-548]
Length = 201
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 144/195 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVPMVVEQT +GER++DIYSRLLK+RI+ + I+D +A LI AQLLFL+AE+P+K+I L
Sbjct: 7 LVPMVVEQTGQGERAFDIYSRLLKDRIILLGTPIDDDVANLIVAQLLFLQAEDPKKDIDL 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTMQ + + T+C+GQ ASMG++LL AG G RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGLAIYDTMQILSCDVKTYCVGQCASMGAVLLCAGAAGKRFALPNSRIMI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A+D++ ++I ++K LN I + G+ +++EK +RD M A +A
Sbjct: 127 HQPWGGAQGTAADMDIQVKEIQRLKAMLNGILSSHSGQPIKKIEKDTERDFFMGAEDAVK 186
Query: 198 WGVVDKVLMSRIDIE 212
+G+VDKV+ +
Sbjct: 187 YGLVDKVVARPSQEK 201
>gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
Length = 214
Score = 235 bits (600), Expect = 3e-60, Method: Composition-based stats.
Identities = 103/195 (52%), Positives = 145/195 (74%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V+EQ+ RGER++DIYSRLL+ERI+F+ I D ++ + AQLLFLEAE+P+
Sbjct: 20 NKTVAAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPE 79
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGG VTAGMAIYDTMQ I P + T C G AASMG+ LLS G KG R ALPN
Sbjct: 80 KDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPN 139
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA +IE A++I+ +K+ LN + ++ G+ E++ + +RD+ +S
Sbjct: 140 SRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSP 199
Query: 193 SEACDWGVVDKVLMS 207
SEA ++G++DKV+
Sbjct: 200 SEAVEYGLIDKVIKK 214
>gi|288941151|ref|YP_003443391.1| ATP-dependent Clp protease proteolytic subunit ClpP [Allochromatium
vinosum DSM 180]
gi|288896523|gb|ADC62359.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Allochromatium vinosum DSM 180]
Length = 215
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 119/209 (56%), Positives = 161/209 (77%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
++ D + LGLVP+VVEQT RGERS+DIYSRLLKER++F+ G +EDHMA L+ AQLLFL
Sbjct: 6 SRTDWQPQGLGLVPIVVEQTARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQLLFL 65
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP K+I LYINSPGG VTAG+AIYDTM+FI+P +ST C+GQAASMG+LLL+ G G
Sbjct: 66 ESENPDKDIHLYINSPGGSVTAGLAIYDTMRFIRPDVSTMCIGQAASMGALLLAGGAAGK 125
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RF LP++R+++HQP GGF GQA+DIE HA++I+ I+ RLN+I + G+ E++ + DR
Sbjct: 126 RFCLPHSRMMIHQPLGGFQGQATDIEIHAREILYIRERLNQILSHHTGQPIEKIAEDTDR 185
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D M A ++G++D+V+ R + K
Sbjct: 186 DRFMDGETAREYGLIDQVITERGPVASKK 214
>gi|149181848|ref|ZP_01860338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1]
gi|148850487|gb|EDL64647.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1]
Length = 206
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 107/199 (53%), Positives = 151/199 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+R++ + I+D++A I AQLLFLE+ENP+K+I
Sbjct: 8 MNLIPTVIEQTNRGERAYDIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLESENPEKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAIYDT+Q+IKP + T C+G AASMG+ LL+AG KG R ALPNA +
Sbjct: 68 SIYINSPGGSITAGMAIYDTIQYIKPDVQTICIGMAASMGAFLLAAGAKGKRLALPNAEV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN+I G+ E + K DRD+ M+A A
Sbjct: 128 MIHQPLGGAQGQATEIEIAAKRILFLREKLNQILSDRTGQPLEVISKDTDRDNFMTAERA 187
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++D+++ S E K
Sbjct: 188 LEYGLIDRIITSNEMNENK 206
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 145/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ ++ D A LI AQLLFLEAE+P K+I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P +ST C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K+ LN+ + G+ +++ + +RD MSA +A +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGQPLDKIAEDTERDFFMSAEDALE 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVINRRP 192
>gi|258542726|ref|YP_003188159.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256633804|dbj|BAH99779.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01]
gi|256636863|dbj|BAI02832.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|256639916|dbj|BAI05878.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|256642972|dbj|BAI08927.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|256646027|dbj|BAI11975.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|256649080|dbj|BAI15021.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|256652067|dbj|BAI18001.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655124|dbj|BAI21051.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
Length = 220
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 3 FEGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
G +D ++F LVPMVVEQT+RGER++DIYSRLL+ERI+F+TG + D +A+LI A
Sbjct: 1 MSGMRDRDPVEIFSNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASLISA 60
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+LE+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+
Sbjct: 61 QLLYLESVNPNKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAG 120
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
GEKG RFALPNAR+++HQPSGG GQASDIE A++I+ I+++LNEIY ++ G+T EE+E
Sbjct: 121 GEKGRRFALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQKLNEIYREHTGRTLEEIE 180
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ L+RD MSA EA +G+VD+V+ E K
Sbjct: 181 QKLERDTYMSAQEAQSFGIVDEVISHHKATETGKK 215
>gi|258511812|ref|YP_003185246.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|257478538|gb|ACV58857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
Length = 198
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 112/187 (59%), Positives = 147/187 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQT+RGER+YDIYSRLLK+RIV + I+D +A I AQLLFL A++P+K+I +Y
Sbjct: 5 IPYVIEQTSRGERTYDIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMY 64
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDTMQ I+P +ST C+G AASMG+ LL+AGEKG R+ALPNA I++H
Sbjct: 65 INSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIMIH 124
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQASDI+ HA+ I+K K +LN + + G+ E +E+ DRDH M+A EA +
Sbjct: 125 QPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAKAY 184
Query: 199 GVVDKVL 205
G++D+VL
Sbjct: 185 GLIDEVL 191
>gi|124514481|gb|EAY55994.1| ATP-dependent Clp protease, proteolytic subunit [Leptospirillum
rubarum]
Length = 203
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 116/190 (61%), Positives = 153/190 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+P VVEQT RGERSYDIYSRLLK+RI+F+ I+D +A L+ AQLLFLEAE+ K+I+L
Sbjct: 2 LIPYVVEQTTRGERSYDIYSRLLKDRIIFLGTAIDDMVANLVIAQLLFLEAEDASKDINL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMG++LL+AG G RFALPNARI++
Sbjct: 62 YINSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGADGKRFALPNARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++IE HA++I+K++ LN I K+ ++ +V + DRD+ +SA +A
Sbjct: 122 HQPLGGVQGQATEIEIHAREILKMREHLNGILAKHTKQSLAKVSQDTDRDYFLSAEDAKA 181
Query: 198 WGVVDKVLMS 207
+G+VD V+ S
Sbjct: 182 YGLVDSVISS 191
>gi|154247518|ref|YP_001418476.1| endopeptidase Clp [Xanthobacter autotrophicus Py2]
gi|226706559|sp|A7ILC6|CLPP_XANP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154161603|gb|ABS68819.1| Endopeptidase Clp [Xanthobacter autotrophicus Py2]
Length = 211
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 139/210 (66%), Positives = 177/210 (84%), Gaps = 2/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D ++ L+PMVVEQTNRGERSYDI+SRLLKERI+F+TG +ED M+TL AQLLFL
Sbjct: 1 MRDPVDTYMNYLIPMVVEQTNRGERSYDIFSRLLKERIIFLTGPVEDGMSTLAVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EA+NP+KEIS+YINSPGGVVT+G+AIYDTMQFIKP +ST C+GQAASMGSLLL+AGEK M
Sbjct: 61 EADNPKKEISMYINSPGGVVTSGLAIYDTMQFIKPAVSTLCIGQAASMGSLLLTAGEKDM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGF GQ +DI HAQ+I+ +KRRLNEIYVK+ G++ +++E L+R
Sbjct: 121 RFALPNARIMVHQPSGGFQGQVTDIMLHAQEILNLKRRLNEIYVKHTGRSMDKIEDALER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ M+A A D+G++D V+ R ++ SK
Sbjct: 181 DNFMTAKAALDFGLIDAVIDQRP-TDDTSK 209
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 235 bits (599), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 157/195 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP+V+EQT R ER YDIYSRLLK+RI+F+ +I DH+A ++ AQLLFL+ E+P+K+I
Sbjct: 1 MSIVPIVIEQTGRTERVYDIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG+V++G+AIYDTMQ++KP I+T+C+GQA+SM +LL+AG KG RFALP++R+
Sbjct: 61 HIYINSPGGMVSSGLAIYDTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+D+E HA++I+K+K LN I K+ G+ E+++K +RD MSA EA
Sbjct: 121 MIHQPIGGFYGQATDVEIHAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G+VD+V+ S
Sbjct: 181 KLYGIVDEVISSIKK 195
>gi|255321158|ref|ZP_05362324.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
radioresistens SK82]
gi|262380154|ref|ZP_06073309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
radioresistens SH164]
gi|255301712|gb|EET80963.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
radioresistens SK82]
gi|262298348|gb|EEY86262.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
radioresistens SH164]
Length = 201
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 123/197 (62%), Positives = 160/197 (81%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP+VVEQ++RGERS+DI+SRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP
Sbjct: 5 SIENALVPVVVEQSSRGERSFDIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPD 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG RF L N
Sbjct: 65 KDIHLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRFCLEN 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR+++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE + + DRD+ M+A
Sbjct: 125 ARVMIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYERIARDTDRDNFMTA 184
Query: 193 SEACDWGVVDKVLMSRI 209
A ++G+VD+VL R
Sbjct: 185 QAAKEYGLVDEVLSKRP 201
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 154/190 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT RGERSYDIYSRLLK+RI+F+ G I+D ++ L+ AQLLFLE+E+P+K+I
Sbjct: 1 MSLVPIVVEQTGRGERSYDIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTMQ+IK P+ST C+GQAASMG++LL+AG +G RF LPN+RI
Sbjct: 61 HLYINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI HAQ+I++++ LN I +C + E + + +RD M A +A
Sbjct: 121 MIHQPLGGFQGQASDISIHAQEILRLREDLNRILAHHCSQDIETIARDTERDFFMGAEDA 180
Query: 196 CDWGVVDKVL 205
+G++DK++
Sbjct: 181 QKYGLIDKIV 190
>gi|251797042|ref|YP_003011773.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247544668|gb|ACT01687.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 194
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 143/193 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P VVEQ+NRGERSYDIYSRLLK+RIVF+ I+D +A I AQLLFL AE+P KE
Sbjct: 1 MSSFIPYVVEQSNRGERSYDIYSRLLKDRIVFLGSAIDDQVANSIVAQLLFLAAEDPDKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG TAG AIYDTMQ+IKP + T C+G AAS ++LL +G KG RFALP++
Sbjct: 61 ISLYINSPGGSTTAGFAIYDTMQYIKPEVHTICVGMAASFAAILLLSGAKGKRFALPSSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQASDI A+ I+ + RLN I G+ E++EK +DRD+ +SA E
Sbjct: 121 VMIHQPHGGAQGQASDIAISAKRILDTRARLNRIAADRTGQPLEKIEKDMDRDYFLSAQE 180
Query: 195 ACDWGVVDKVLMS 207
A D+G++D+V+ +
Sbjct: 181 ALDYGIIDQVVHT 193
>gi|69249001|ref|ZP_00604844.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|227550370|ref|ZP_03980419.1| endopeptidase Clp [Enterococcus faecium TX1330]
gi|257879589|ref|ZP_05659242.1| peptidase S14 [Enterococcus faecium 1,230,933]
gi|257882608|ref|ZP_05662261.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257885031|ref|ZP_05664684.1| peptidase S14 [Enterococcus faecium 1,231,501]
gi|257888403|ref|ZP_05668056.1| peptidase S14 [Enterococcus faecium 1,141,733]
gi|257890257|ref|ZP_05669910.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|257893441|ref|ZP_05673094.1| peptidase S14 [Enterococcus faecium 1,231,408]
gi|257897223|ref|ZP_05676876.1| peptidase S14 [Enterococcus faecium Com12]
gi|257899224|ref|ZP_05678877.1| peptidase S14 [Enterococcus faecium Com15]
gi|258616800|ref|ZP_05714570.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecium DO]
gi|260559746|ref|ZP_05831926.1| peptidase S14 [Enterococcus faecium C68]
gi|261207321|ref|ZP_05922008.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289566520|ref|ZP_06446943.1| Clp protease [Enterococcus faecium D344SRF]
gi|293377995|ref|ZP_06624173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium PC4.1]
gi|293557243|ref|ZP_06675791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1039]
gi|293559757|ref|ZP_06676278.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1162]
gi|293567607|ref|ZP_06678951.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1071]
gi|293570370|ref|ZP_06681427.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E980]
gi|294616541|ref|ZP_06696319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1636]
gi|294618382|ref|ZP_06697960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1679]
gi|294623239|ref|ZP_06702110.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium U0317]
gi|314938917|ref|ZP_07846184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a04]
gi|314943860|ref|ZP_07850593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133C]
gi|314948100|ref|ZP_07851501.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0082]
gi|314951634|ref|ZP_07854679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133A]
gi|314993860|ref|ZP_07859194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133B]
gi|314996702|ref|ZP_07861725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a01]
gi|68194308|gb|EAN08823.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|227180509|gb|EEI61481.1| endopeptidase Clp [Enterococcus faecium TX1330]
gi|257813817|gb|EEV42575.1| peptidase S14 [Enterococcus faecium 1,230,933]
gi|257818266|gb|EEV45594.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257820883|gb|EEV48017.1| peptidase S14 [Enterococcus faecium 1,231,501]
gi|257824457|gb|EEV51389.1| peptidase S14 [Enterococcus faecium 1,141,733]
gi|257826617|gb|EEV53243.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|257829820|gb|EEV56427.1| peptidase S14 [Enterococcus faecium 1,231,408]
gi|257833788|gb|EEV60209.1| peptidase S14 [Enterococcus faecium Com12]
gi|257837136|gb|EEV62210.1| peptidase S14 [Enterococcus faecium Com15]
gi|260074414|gb|EEW62736.1| peptidase S14 [Enterococcus faecium C68]
gi|260078381|gb|EEW66085.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289161674|gb|EFD09551.1| Clp protease [Enterococcus faecium D344SRF]
gi|291589708|gb|EFF21512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1071]
gi|291590588|gb|EFF22319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1636]
gi|291595359|gb|EFF26674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1679]
gi|291597346|gb|EFF28526.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium U0317]
gi|291600607|gb|EFF30911.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1039]
gi|291606305|gb|EFF35718.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E1162]
gi|291609548|gb|EFF38813.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium E980]
gi|292643360|gb|EFF61492.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium PC4.1]
gi|313589140|gb|EFR67985.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a01]
gi|313591670|gb|EFR70515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133B]
gi|313596230|gb|EFR75075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133A]
gi|313597478|gb|EFR76323.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133C]
gi|313641791|gb|EFS06371.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0133a04]
gi|313645436|gb|EFS10016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecium TX0082]
Length = 197
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 107/196 (54%), Positives = 149/196 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++GQ+ D +A I AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM F+K + T MG AASMGS LL+AG KG RFALPNA I
Sbjct: 61 YLYINSPGGSVTAGMAIYDTMNFVKADVQTIVMGMAASMGSFLLTAGTKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + RLN+I + G+ E +EK DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILQTRERLNKILAERTGQPLEVIEKDTDRDNYMTAEQA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G++D+V+ + +
Sbjct: 181 KAYGLIDEVMENSSSL 196
>gi|307544936|ref|YP_003897415.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
gi|307216960|emb|CBV42230.1| ATP-dependent Clp protease proteolytic subunit [Halomonas elongata
DSM 2581]
Length = 206
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGERSYDIYSRLLKER++F+ G +ED+ A L+ AQLLFLE+ENP K+I
Sbjct: 12 GLVPMVVEQSARGERSYDIYSRLLKERVIFLVGPVEDYTANLLVAQLLFLESENPDKDIH 71
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+ G G R+ LPN+R++
Sbjct: 72 LYINSPGGSVTAGMSIYDTMQFIKPDVSTVCIGQAASMGALLLAGGAHGKRYCLPNSRMM 131
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQASDIE H ++I+ I+ RLN+I + G+ +E + K DRD+ M+ ++A
Sbjct: 132 IHQPLGGYQGQASDIEIHTREILGIRERLNQILAHHTGQKFETIAKDTDRDNFMNGAQAA 191
Query: 197 DWGVVDKVLMSRI 209
++G++D VL R
Sbjct: 192 EYGLIDAVLDKRP 204
>gi|304316359|ref|YP_003851504.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
gi|302777861|gb|ADL68420.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermoanaerobacterium thermosaccharolyticum DSM 571]
Length = 194
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQTNRGERSYDI+SRLLK+RIVF+ +I D A+L+ AQLLFLE E+P K+I
Sbjct: 1 MSLVPIVVEQTNRGERSYDIFSRLLKDRIVFLGEEINDVSASLVVAQLLFLEGEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+ AIYDTMQ+IKP + T C+G AAS G+ LL+AG KG RF+LPN+ I
Sbjct: 61 WLYINSPGGSITSAFAIYDTMQYIKPDVVTMCVGMAASAGAFLLAAGAKGKRFSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I+K+K++LN+I + G+ E++E+ +RD M EA
Sbjct: 121 MIHQPLGGTQGQATDIKIHAERIIKMKQKLNKILSERTGQPLEKIERDTERDFFMDPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D +L+ R
Sbjct: 181 KAYGLIDDILVRRK 194
>gi|87121308|ref|ZP_01077198.1| putative ATP-dependent Clp protease, proteolytic subunit
[Marinomonas sp. MED121]
gi|86163465|gb|EAQ64740.1| putative ATP-dependent Clp protease, proteolytic subunit
[Marinomonas sp. MED121]
Length = 210
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 157/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA L+ AQLLFLE+ENP K+I
Sbjct: 17 GLVPMVIEQTARGERSFDIYSRLLKERVIFLVGQVEDHMANLVVAQLLFLESENPDKDIH 76
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+AG G R+ LPN+R++
Sbjct: 77 LYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTAGAAGKRYCLPNSRVM 136
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQASDIE H ++I+ IK RLNEI + GK EEV + DRD+ M + A
Sbjct: 137 IHQPLGGYQGQASDIEIHTREILSIKHRLNEIISFHTGKPIEEVAEDTDRDNFMDPTAAK 196
Query: 197 DWGVVDKVLMSRI 209
++G++D +L+ R
Sbjct: 197 EYGLIDDILLKRE 209
>gi|330503117|ref|YP_004379986.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
gi|328917403|gb|AEB58234.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
mendocina NK-01]
Length = 213
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 124/210 (59%), Positives = 159/210 (75%), Gaps = 7/210 (3%)
Query: 7 AKKDSEDVFLG-------LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
++ + LVPMV+EQ+ RGER+YDIYSRLLKER++F+ GQ+ED+MA LI
Sbjct: 1 MSRNPFMQNMPEIQAAGGLVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLI 60
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
CAQLLFLEAENP K+I LYINSPGG VTAGMAIYDTMQFIK +ST C+GQA SMG+ LL
Sbjct: 61 CAQLLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKADVSTTCIGQACSMGAFLL 120
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
+ G KG RF LPN+R+++HQP GGF GQASDIE HA++I+ I+ RLNE+ + G++ E
Sbjct: 121 AGGAKGKRFCLPNSRVMIHQPLGGFQGQASDIEIHAKEILFIRERLNELLAHHTGQSLET 180
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+E+ +RD+ MSAS A ++G+VD V R
Sbjct: 181 IERDTNRDNFMSASRAVEYGLVDAVHEKRQ 210
>gi|291614263|ref|YP_003524420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
gi|291584375|gb|ADE12033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sideroxydans
lithotrophicus ES-1]
Length = 208
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 117/208 (56%), Positives = 159/208 (76%), Gaps = 2/208 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++ + +D+ G++PMVVE + RGER+YDIYSRLLKER+VF+ G++ DH A LI
Sbjct: 2 LNSSTKLMMEPQDI--GMIPMVVESSGRGERAYDIYSRLLKERVVFLVGEVNDHTANLIV 59
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLE+ENP K+I YINSPGG ++AGMAIYDTMQFIKP +ST C+G AASMG+ LL
Sbjct: 60 AQMLFLESENPDKDIHFYINSPGGSISAGMAIYDTMQFIKPQVSTLCIGMAASMGAFLLQ 119
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RFALPN+ +++HQP GGF GQASDIE HA+ I+ ++ RL + ++ G+T EE+
Sbjct: 120 AGAKGKRFALPNSTVMIHQPLGGFRGQASDIEIHARYILSLRERLYALMAQHTGRTVEEI 179
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
+ +RD+ +SA EA ++G+VD+VL R
Sbjct: 180 ARDSERDNFLSAKEAVEYGLVDQVLDKR 207
>gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 214
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 103/195 (52%), Positives = 145/195 (74%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V+EQ+ RGER++DIYSRLL+ERI+F+ I D ++ + AQLLFLEAE+P+
Sbjct: 20 NKTVTAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPE 79
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGG VTAGMAIYDTMQ I P + T C G AASMG+ LLS G KG R ALPN
Sbjct: 80 KDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPN 139
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA +IE A++I+ +K+ LN + ++ G+ E++ + +RD+ +S
Sbjct: 140 SRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSP 199
Query: 193 SEACDWGVVDKVLMS 207
SEA ++G++DKV+
Sbjct: 200 SEAVEYGLIDKVIKK 214
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 104/198 (52%), Positives = 147/198 (74%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+S + + VP V+EQ+ RGER++DIYSRLL+ERI+F+ I D ++ + AQLLFLEAE
Sbjct: 17 ESNNKTIAAVPTVIEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAE 76
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P+K+I +YINSPGG VTAGMAIYDTMQ I P + T C G AASMG+ LLS G KG R A
Sbjct: 77 DPEKDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLA 136
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQP GG GQA +IE A++I+ +K+ LN + ++ G+ E++ + +RD+
Sbjct: 137 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYF 196
Query: 190 MSASEACDWGVVDKVLMS 207
+S SEA ++G++DKV+
Sbjct: 197 LSPSEAVEYGLIDKVIKK 214
>gi|73666834|ref|YP_302850.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ehrlichia
canis str. Jake]
gi|108935919|sp|Q3YSQ3|CLPP_EHRCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72393975|gb|AAZ68252.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ehrlichia
canis str. Jake]
Length = 200
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 137/200 (68%), Positives = 174/200 (87%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG IED MA+L+ AQL+FLEAENP+KEI
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLVFLEAENPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMGSLLL+AGE GMR+ALPN+RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I+ IK RLN+IYVK+ G+ EV ++RD+ M A +A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILDIKSRLNDIYVKHTGRDLPEVVANMERDNFMRAEKA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
D+G++DKV+ R+DIEE +
Sbjct: 181 KDFGIIDKVIEKRLDIEESN 200
>gi|326561827|gb|EGE12162.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 7169]
gi|326563259|gb|EGE13526.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 46P47B1]
gi|326563373|gb|EGE13638.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 12P80B1]
gi|326565911|gb|EGE16072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 103P14B1]
gi|326568952|gb|EGE19021.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC1]
gi|326569251|gb|EGE19312.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC7]
gi|326571926|gb|EGE21931.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis BC8]
gi|326575439|gb|EGE25364.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis 101P30B1]
gi|326576473|gb|EGE26381.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis CO72]
gi|326577944|gb|EGE27808.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis O35E]
Length = 217
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 128/195 (65%), Positives = 163/195 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMV+EQ+ RGERS+DI+SRLL+ER++F+TGQ+ED+MA LI AQLLFLEA+NP+K+I
Sbjct: 21 NALVPMVIEQSGRGERSFDIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDI 80
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTM FIKP +ST CMGQAASMGS LLSAGEKG R+AL N+R+
Sbjct: 81 HLYINSPGGVVTAGMAIYDTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRV 140
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+++K +LN + ++ G+ E++E+ DRDH MSA +A
Sbjct: 141 MIHQPLGGFRGQASDIEIHAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQA 200
Query: 196 CDWGVVDKVLMSRID 210
D+G+VD VL R
Sbjct: 201 RDYGLVDVVLDKRPK 215
>gi|220909724|ref|YP_002485035.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
gi|219866335|gb|ACL46674.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7425]
Length = 236
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 107/206 (51%), Positives = 150/206 (72%), Gaps = 7/206 (3%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQ------IEDHMATLICAQLLFLEAEN 70
+VPMVVEQ+ RGER++DIYSRLL+ERI+F+ G I+D +A I AQLLFL++E+
Sbjct: 27 NIVPMVVEQSGRGERAFDIYSRLLRERIIFLGGGGSNGRGIDDALADSIVAQLLFLDSED 86
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+++I LYINSPGG VTAGMAIYDT+Q + + T C G AASMG+ LL+ G G R AL
Sbjct: 87 PERDIYLYINSPGGSVTAGMAIYDTIQHVHADVCTICFGLAASMGAFLLAGGAAGKRMAL 146
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQP GG GQA DIE A++I+ KR+LNE+ + G+ +E +E +RD M
Sbjct: 147 PHSRIMIHQPLGGAQGQAVDIEIQAKEILYHKRKLNELLAHHTGQPFERIEADTERDFFM 206
Query: 191 SASEACDWGVVDKVLMSRIDIEEKSK 216
SA EA ++G+VD+V+ R ++ +S+
Sbjct: 207 SAEEAKNYGLVDQVIT-RQNLPSRSE 231
>gi|150398272|ref|YP_001328739.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
medicae WSM419]
gi|150029787|gb|ABR61904.1| Endopeptidase Clp [Sinorhizobium medicae WSM419]
Length = 205
Score = 235 bits (599), Expect = 4e-60, Method: Composition-based stats.
Identities = 119/204 (58%), Positives = 157/204 (76%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAE+P
Sbjct: 1 MREAMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I LYINSPGGVVT+G A+YDTM++I+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 TKPIQLYINSPGGVVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N IL+HQPSGGF GQASD+ HA++I + K R+ +Y ++CG+TYEE E+ +DRD M+
Sbjct: 121 NTSILVHQPSGGFQGQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA +WG++D +L R+ E+
Sbjct: 181 AEEALEWGLIDCILTERVAGAERD 204
>gi|325983082|ref|YP_004295484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
gi|325532601|gb|ADZ27322.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nitrosomonas
sp. AL212]
Length = 213
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 120/202 (59%), Positives = 161/202 (79%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+D E LGL+PMV+E + RGER+YDIYSRLLKER+VF+ G + + A L+ AQ LFLE+
Sbjct: 9 RDMEPKNLGLIPMVIETSGRGERAYDIYSRLLKERVVFLVGPVTEASANLVVAQFLFLES 68
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN +K+I YINSPGG+V+AG+A+YDTMQ+IKP +ST C+GQAASMG+LLL+AG KG R+
Sbjct: 69 ENSEKDIFFYINSPGGMVSAGLAVYDTMQYIKPDVSTLCIGQAASMGALLLTAGAKGKRY 128
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LPN+R+++HQP GGF GQASDIE HA++I+ +K RLNEI K+ + ++EK DRD+
Sbjct: 129 CLPNSRVMIHQPLGGFQGQASDIEIHAREILYLKSRLNEIMAKHTERPVSDLEKDTDRDN 188
Query: 189 IMSASEACDWGVVDKVLMSRID 210
MSA+E+ ++G+VD VL SR D
Sbjct: 189 FMSATESVNYGLVDAVLSSRND 210
>gi|291520781|emb|CBK79074.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coprococcus
catus GD/7]
Length = 194
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 143/194 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER++DIYSRLLK+RI+F+ ++ D A LI +QLLFLE+E+P K+I
Sbjct: 1 MSLVPTVIEQSSRGERAFDIYSRLLKDRIIFLGEEVTDVSANLIVSQLLFLESEDPGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AGMAIYDTMQFIK +ST CMG AASMG+ LL+ G G R ALP++ I
Sbjct: 61 QMYINSPGGSVSAGMAIYDTMQFIKCDVSTICMGMAASMGAFLLAGGTPGKRLALPHSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I+ A I KR LNE+ N + E++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIQIVADRIQYTKRMLNELLAANTHQPLEKIAADTERDYYMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 181 KNYGLIDAVVTKRA 194
>gi|296112317|ref|YP_003626255.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
gi|295920011|gb|ADG60362.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moraxella
catarrhalis RH4]
Length = 217
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 128/195 (65%), Positives = 163/195 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMV+EQ+ RGERS+DI+SRLL+ER++F+TGQ+ED+MA LI AQLLFLEA+NP+K+I
Sbjct: 21 NALVPMVIEQSGRGERSFDIFSRLLRERVIFLTGQVEDNMANLIVAQLLFLEADNPEKDI 80
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAGMAIYDTM FIKP +ST CMGQAASMGS LLSAGEKG R+AL N+R+
Sbjct: 81 HLYINSPGGVVTAGMAIYDTMNFIKPHVSTICMGQAASMGSFLLSAGEKGKRYALANSRV 140
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+++K +LN + ++ G+ E++E+ DRDH MSA +A
Sbjct: 141 MIHQPLGGFRGQASDIEIHAREIIELKAKLNRLLAEHTGQPIEKLERDTDRDHFMSAEQA 200
Query: 196 CDWGVVDKVLMSRID 210
D+G+VD VL R
Sbjct: 201 RDYGLVDVVLDKRPK 215
>gi|187735546|ref|YP_001877658.1| Endopeptidase Clp [Akkermansia muciniphila ATCC BAA-835]
gi|187425598|gb|ACD04877.1| Endopeptidase Clp [Akkermansia muciniphila ATCC BAA-835]
Length = 218
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 109/211 (51%), Positives = 151/211 (71%), Gaps = 2/211 (0%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+K + + VPMVVEQ RGER++DIYSRLLK+R++F+ I+D +A + AQLLF
Sbjct: 6 SSKSTPANSY--YVPMVVEQDGRGERAFDIYSRLLKDRVIFIGSAIDDDVANSVIAQLLF 63
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ +P+K+I +YINSPGG VTAG+AIYDTMQF+ ++T+C+G AASMGS+LL+AG G
Sbjct: 64 LQMADPKKDIHVYINSPGGSVTAGLAIYDTMQFVSCDVNTYCLGIAASMGSVLLAAGTPG 123
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF LPN+ +++HQ SGG G ASD+ER + +K+RLN I K+ GKT +++EK D
Sbjct: 124 KRFCLPNSHVMIHQVSGGAQGTASDVERTIGFMFNLKKRLNGILAKHTGKTEKQIEKDAD 183
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
RD+ M+A EA +G+VDKVL D + K
Sbjct: 184 RDNYMTAEEAVAYGLVDKVLAHHSDDQGDKK 214
>gi|52425902|ref|YP_089039.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
succiniciproducens MBEL55E]
gi|60389529|sp|Q65RF6|CLPP_MANSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52307954|gb|AAU38454.1| ClpP protein [Mannheimia succiniciproducens MBEL55E]
Length = 193
Score = 234 bits (598), Expect = 4e-60, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 161/193 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQT+RGERSYDIYSRLLKER++F++G++ED+MA LI AQLLFLE+ENP+K+I
Sbjct: 1 MALIPMVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDNMANLIVAQLLFLESENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQFIKPDVRTLCVGQACSMGAFLLAGGAAGKRAALPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDI+ HAQ+I+KIK+ LNE + G+ +E +E+ DRD+ MSA +A
Sbjct: 121 MIHQPLGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQPFEVIERDTDRDNFMSAEDA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D VL+ R
Sbjct: 181 KNYGLIDSVLVKR 193
>gi|313892932|ref|ZP_07826509.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
gi|313442285|gb|EFR60700.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Veillonella sp. oral taxon 158 str. F0412]
Length = 197
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 117/197 (59%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ+ RGERSYDIYSRLLK+RI+F+ G I+D++A + AQ+LFLEAE+P K+I L
Sbjct: 2 YVPIVVEQSERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASMG++LL+AG KG R+ALP+AR+++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQAS+IE HA++I++++ LN I G+ E V + DRD+ MSA +A +
Sbjct: 122 HQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVE 181
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D+VL R +E K
Sbjct: 182 YGLIDEVLT-REPVESK 197
>gi|229823184|ref|ZP_04449253.1| hypothetical protein GCWU000282_00482 [Catonella morbi ATCC 51271]
gi|229787350|gb|EEP23464.1| hypothetical protein GCWU000282_00482 [Catonella morbi ATCC 51271]
Length = 198
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 150/198 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RIV ++G I+D +A + AQLLFL+A++P K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIVMLSGPIDDAVANSVIAQLLFLDAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AI+DTM FI + T +G AASMG+ LL+AGEKG R+ALPNA +
Sbjct: 61 YLYINSPGGSVSAGLAIFDTMNFINADVQTIVIGMAASMGAFLLAAGEKGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K + LN+I + G+T + + + DRD+ MSA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILKTRDTLNKILAERTGQTLKVIARDTDRDNYMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+G+VD ++ + ++++
Sbjct: 181 VKYGLVDAIMTNSKNLKK 198
>gi|29375364|ref|NP_814518.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis V583]
gi|227517733|ref|ZP_03947782.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX0104]
gi|229546606|ref|ZP_04435331.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX1322]
gi|229548713|ref|ZP_04437438.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29200]
gi|255971227|ref|ZP_05421813.1| peptidase S14 [Enterococcus faecalis T1]
gi|255973850|ref|ZP_05424436.1| peptidase S14 [Enterococcus faecalis T2]
gi|256617656|ref|ZP_05474502.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
gi|256761537|ref|ZP_05502117.1| peptidase S14 [Enterococcus faecalis T3]
gi|256957363|ref|ZP_05561534.1| peptidase S14 [Enterococcus faecalis DS5]
gi|256959901|ref|ZP_05564072.1| peptidase S14 [Enterococcus faecalis Merz96]
gi|256964395|ref|ZP_05568566.1| peptidase S14 [Enterococcus faecalis HIP11704]
gi|257083692|ref|ZP_05578053.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis Fly1]
gi|257086127|ref|ZP_05580488.1| peptidase S14 [Enterococcus faecalis D6]
gi|257089198|ref|ZP_05583559.1| peptidase S14 [Enterococcus faecalis CH188]
gi|257415340|ref|ZP_05592334.1| peptidase S14 [Enterococcus faecalis AR01/DG]
gi|257418377|ref|ZP_05595371.1| peptidase S14 [Enterococcus faecalis T11]
gi|257421026|ref|ZP_05598016.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis X98]
gi|293384732|ref|ZP_06630586.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis R712]
gi|293387456|ref|ZP_06632008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis S613]
gi|294781490|ref|ZP_06746829.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis PC1.1]
gi|300859735|ref|ZP_07105823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TUSoD Ef11]
gi|307269823|ref|ZP_07551153.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4248]
gi|307272582|ref|ZP_07553835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0855]
gi|307276252|ref|ZP_07557380.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2134]
gi|307284467|ref|ZP_07564629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0860]
gi|307289536|ref|ZP_07569481.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0109]
gi|307296208|ref|ZP_07576036.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0411]
gi|312900365|ref|ZP_07759676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0470]
gi|312904208|ref|ZP_07763370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0635]
gi|312908569|ref|ZP_07767512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 512]
gi|312910494|ref|ZP_07769339.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 516]
gi|312951861|ref|ZP_07770750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0102]
gi|60389766|sp|Q837R0|CLPP_ENTFA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29342824|gb|AAO80588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis V583]
gi|227074814|gb|EEI12777.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX0104]
gi|229306150|gb|EEN72146.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis ATCC 29200]
gi|229308263|gb|EEN74250.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis TX1322]
gi|255962245|gb|EET94721.1| peptidase S14 [Enterococcus faecalis T1]
gi|255966722|gb|EET97344.1| peptidase S14 [Enterococcus faecalis T2]
gi|256597183|gb|EEU16359.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
gi|256682788|gb|EEU22483.1| peptidase S14 [Enterococcus faecalis T3]
gi|256947859|gb|EEU64491.1| peptidase S14 [Enterococcus faecalis DS5]
gi|256950397|gb|EEU67029.1| peptidase S14 [Enterococcus faecalis Merz96]
gi|256954891|gb|EEU71523.1| peptidase S14 [Enterococcus faecalis HIP11704]
gi|256991722|gb|EEU79024.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis Fly1]
gi|256994157|gb|EEU81459.1| peptidase S14 [Enterococcus faecalis D6]
gi|256998010|gb|EEU84530.1| peptidase S14 [Enterococcus faecalis CH188]
gi|257157168|gb|EEU87128.1| peptidase S14 [Enterococcus faecalis ARO1/DG]
gi|257160205|gb|EEU90165.1| peptidase S14 [Enterococcus faecalis T11]
gi|257162850|gb|EEU92810.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis X98]
gi|291077982|gb|EFE15346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis R712]
gi|291083107|gb|EFE20070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis S613]
gi|294451420|gb|EFG19883.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis PC1.1]
gi|295114015|emb|CBL32652.1| ATP-dependent Clp protease proteolytic subunit ClpP [Enterococcus
sp. 7L76]
gi|300850553|gb|EFK78302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TUSoD Ef11]
gi|306496082|gb|EFM65664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0411]
gi|306499497|gb|EFM68869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0109]
gi|306503144|gb|EFM72398.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0860]
gi|306507052|gb|EFM76194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2134]
gi|306510867|gb|EFM79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0855]
gi|306513933|gb|EFM82535.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4248]
gi|310625455|gb|EFQ08738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 512]
gi|310630159|gb|EFQ13442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0102]
gi|310632304|gb|EFQ15587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0635]
gi|311289190|gb|EFQ67746.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis DAPTO 516]
gi|311292553|gb|EFQ71109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0470]
gi|315025732|gb|EFT37664.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2137]
gi|315029868|gb|EFT41800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4000]
gi|315031465|gb|EFT43397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0017]
gi|315036148|gb|EFT48080.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0027]
gi|315145272|gb|EFT89288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX2141]
gi|315148132|gb|EFT92148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX4244]
gi|315151531|gb|EFT95547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0012]
gi|315153193|gb|EFT97209.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0031]
gi|315154911|gb|EFT98927.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0043]
gi|315160005|gb|EFU04022.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0312]
gi|315161970|gb|EFU05987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0645]
gi|315164639|gb|EFU08656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1302]
gi|315166938|gb|EFU10955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1341]
gi|315170665|gb|EFU14682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1342]
gi|315174680|gb|EFU18697.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX1346]
gi|315573467|gb|EFU85658.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309B]
gi|315578035|gb|EFU90226.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0630]
gi|315581428|gb|EFU93619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis TX0309A]
gi|323479964|gb|ADX79403.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enterococcus
faecalis 62]
gi|327534358|gb|AEA93192.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis OG1RF]
gi|329577643|gb|EGG59074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Enterococcus faecalis TX1467]
Length = 197
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 151/196 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D++A + AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AI+DTM F+K + T +G AASMGS LL+AG+KG RFALPNA I
Sbjct: 61 YLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++RLN I + G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++D+V+ + +
Sbjct: 181 KEYGLIDEVMENSSAL 196
>gi|71276511|ref|ZP_00652786.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|71900578|ref|ZP_00682705.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|170729732|ref|YP_001775165.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
M12]
gi|226706561|sp|B0U5N1|CLPP_XYLFM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71162688|gb|EAO12415.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|71729635|gb|EAO31739.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|167964525|gb|ACA11535.1| Endopeptidase Clp [Xylella fastidiosa M12]
Length = 208
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 122/201 (60%), Positives = 163/201 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+D+MA LI AQLLFLEAE
Sbjct: 2 DDVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+I++YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+A
Sbjct: 62 NPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQA+D++ HA++I+ ++ RLNEI K+ G++ E + +RD+
Sbjct: 122 LPNSRVMIHQPLGGFQGQATDVDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA +A +G+VD+V R +
Sbjct: 182 KSAVDAQAYGLVDQVFGQRQE 202
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 103/191 (53%), Positives = 145/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P V+EQ+ RGER++DIYSRLL+ERI+F+ + D +A + AQ+LFLEAE+P+K+I
Sbjct: 24 GVLPTVIEQSGRGERAFDIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAEDPEKDIQ 83
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAG+AIYDTMQ + P I T C G AASMG+ LL+ G KG R ALPN+RI+
Sbjct: 84 LYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLALPNSRIM 143
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +IE A++I+ +K LN + ++ G++ E++ + DRDH +S EA
Sbjct: 144 IHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHFLSPQEAV 203
Query: 197 DWGVVDKVLMS 207
++G++DKV+ S
Sbjct: 204 EYGLIDKVVNS 214
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 112/200 (56%), Positives = 156/200 (78%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ +++ LVP+V+EQT RGER+YDIYSRLL++RIV + I+DH+A LI AQLLFLE++
Sbjct: 2 NHKEILDQLVPIVIEQTPRGERAYDIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQ 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P K+I LYINSPGG VTAG+AIYDTMQ+IKP + T CMGQAASMG++LL+AG G R+A
Sbjct: 62 DPDKDIYLYINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LP++RI++HQP GG GQA+DI HA++I +IK L +I K+ G+ +++ ++RD+
Sbjct: 122 LPHSRIMIHQPLGGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYF 181
Query: 190 MSASEACDWGVVDKVLMSRI 209
MS EA D+G++DKV+ R
Sbjct: 182 MSPYEAKDYGLIDKVIEKRE 201
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 148/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VPMVVEQ+ GER++D+YSRLL+ERI+F+ Q+++++A I AQ+LFL+AE+P+K+I
Sbjct: 26 SNIVPMVVEQSGMGERAFDLYSRLLRERIIFLGTQVDENLANTITAQMLFLDAEDPEKDI 85
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ ++P + T C G AASMG+ LLS G KG R +LP++RI
Sbjct: 86 QLYINSPGGSVTAGMAIYDTMQQVRPDVVTICYGLAASMGAFLLSGGAKGKRMSLPSSRI 145
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A++I+ KR+LNE+ ++ G+ E++E +RD MSA EA
Sbjct: 146 MIHQPLGGAQGQAVDIEIQAKEILYHKRKLNELLAEHTGQPLEKIEVDTERDFFMSAEEA 205
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 206 KNYGLIDQVITR 217
>gi|149911805|ref|ZP_01900408.1| ATP-dependent Clp protease proteolytic subunit [Moritella sp. PE36]
gi|149805105|gb|EDM65128.1| ATP-dependent Clp protease proteolytic subunit [Moritella sp. PE36]
Length = 207
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 126/201 (62%), Positives = 162/201 (80%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+E LVPMVVEQT +GERSYDIYSRLLK+R++F+TGQ+EDHMA L+ AQLLFLE+
Sbjct: 7 NITESPSNTLVPMVVEQTAKGERSYDIYSRLLKDRVIFLTGQVEDHMANLVVAQLLFLES 66
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP K+I LYINSPGG V+AGM+IYDTMQFIKP +ST CMG AASMG+ LL+ GEKG R
Sbjct: 67 ENPDKDIFLYINSPGGSVSAGMSIYDTMQFIKPNVSTICMGMAASMGAFLLAGGEKGKRH 126
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPNA+I++HQP GG+ GQASDIE HA +I+K KR+LNEI ++ G+ Y+ + + DRD+
Sbjct: 127 ALPNAKIMIHQPLGGYQGQASDIEIHANEIIKTKRKLNEILAEHTGQEYDRLARDTDRDN 186
Query: 189 IMSASEACDWGVVDKVLMSRI 209
M+++EA D+G++D V+ R
Sbjct: 187 FMTSAEAMDYGLIDTVITKRD 207
>gi|256854365|ref|ZP_05559729.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis T8]
gi|256709925|gb|EEU24969.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis T8]
Length = 196
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 151/196 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D++A + AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AI+DTM F+K + T +G AASMGS LL+AG+KG RFALPNA I
Sbjct: 61 YLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++RLN I + G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++D+V+ + +
Sbjct: 181 KEYGLIDEVMENSSAL 196
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
Length = 233
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 147/201 (73%), Gaps = 1/201 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ ++P+V+EQ+ GER++DIYSRLL+ERIVF+ ++D +A I AQLL+LEAE+P+
Sbjct: 26 NSLANVLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPE 85
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V AG+AIYDTMQ I+P ++T C G AASMG+ LL G G R +LP+
Sbjct: 86 KDIQLYINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPS 145
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQASDI A++I+ IK+RLN + + G+ Y+ + +RD MSA
Sbjct: 146 SRIMIHQPLGGAQGQASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSA 205
Query: 193 SEACDWGVVDKVLMSRIDIEE 213
EA ++G++D V+ SR ++ +
Sbjct: 206 VEAKEYGLIDLVI-SRPELPD 225
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|38257586|sp|Q8CTE0|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
Length = 194
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 104/194 (53%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G++ E++++ DRD+ ++A+EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+
Sbjct: 181 KEYGLIDEVMEPEK 194
>gi|220928259|ref|YP_002505168.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulolyticum H10]
gi|254763787|sp|B8I8F5|CLPP_CLOCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219998587|gb|ACL75188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulolyticum H10]
Length = 194
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 107/194 (55%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDI+SRLL +RI+ ++ ++ D A+LI AQ+L+LEA++P K+I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIFSRLLNDRIIVLSDEVNDATASLIVAQMLYLEAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V +G AIYDTMQ++K +ST CMG AASMG+ LL+AGEKG RFALPN+ I
Sbjct: 61 QFYINSPGGSVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA++I++ + +LN+I + G+ +++EK +RD MSA EA
Sbjct: 121 MIHQPLGGARGQATDIKIHAENILRTRDKLNKILSERTGQPLDKIEKDTERDFFMSADEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D +++ R
Sbjct: 181 KAYGIIDDIMVRRK 194
>gi|154253670|ref|YP_001414494.1| endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
gi|154157620|gb|ABS64837.1| Endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
Length = 213
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 136/204 (66%), Positives = 169/204 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
KD + ++ LVPMVVEQTNRGER+YDI+SRLLKE I+FV G +ED MA L+ AQLLFLE
Sbjct: 1 MKDPIETYMNLVPMVVEQTNRGERAYDIFSRLLKEHIIFVAGPVEDGMAMLVTAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEIS+YINSPGGVVT+G+AIYDTMQ I+PP+ST CMGQAASMGSLLL+AGEKGMR
Sbjct: 61 AENPKKEISMYINSPGGVVTSGLAIYDTMQHIRPPVSTVCMGQAASMGSLLLAAGEKGMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALPNARI++HQPSGGF GQASDIE HA++ + I+ RLN IY K+ G++ + VE L+RD
Sbjct: 121 FALPNARIMVHQPSGGFQGQASDIEIHARETIAIRERLNNIYCKHTGQSLKAVEDALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDI 211
+ MS A ++G++D V + R +
Sbjct: 181 NFMSPERALEFGIIDHVGVDRPPL 204
>gi|238018907|ref|ZP_04599333.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
gi|237864391|gb|EEP65681.1| hypothetical protein VEIDISOL_00767 [Veillonella dispar ATCC 17748]
Length = 197
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 117/197 (59%), Positives = 157/197 (79%), Gaps = 1/197 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ+ RGERSYDIYSRLLK+RI+F+ G I+D++A + AQ+LFLEAE+P K+I L
Sbjct: 2 YVPIVVEQSERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASMG++LL+AG KG R+ALP+AR+++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRYALPHARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQAS+IE HA++I++++ LN I G+ E V + DRD+ MSA +A +
Sbjct: 122 HQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVE 181
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D+VL R +E K
Sbjct: 182 YGLIDEVLT-REPVESK 197
>gi|157803694|ref|YP_001492243.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
gi|166214705|sp|A8EYM5|CLPP_RICCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157784957|gb|ABV73458.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
canadensis str. McKiel]
Length = 201
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 125/196 (63%), Positives = 163/196 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGS LL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSFLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ G+ + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYQGQATDIEIHAQETLKIKRLLNELYSKHTGQDVKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G+VD ++ SR
Sbjct: 181 KKFGIVDNIISSRNAT 196
>gi|332016545|gb|EGI57426.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Acromyrmex echinatior]
Length = 224
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 113/196 (57%), Positives = 158/196 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+L VP+VVEQ+ RGER+YDIYSRLLKERI+ + G + D +A+ + AQLLFL++E+
Sbjct: 8 SSRYLNFVPIVVEQSGRGERAYDIYSRLLKERIICLMGPVTDVVASAVIAQLLFLQSESS 67
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+ I LYINSPGG VTAG+ IYDTMQ++ PPIST+C+GQA SM SLLL+AG KGMR +LP
Sbjct: 68 KNPIHLYINSPGGSVTAGLGIYDTMQYVLPPISTWCVGQACSMASLLLAAGTKGMRHSLP 127
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI++HQPSGG GQA+DI+ A +I+K+K+++NE+YVK+ G+ EE+ K+++RD+ MS
Sbjct: 128 NARIMIHQPSGGVQGQATDIQIQATEILKLKQQINELYVKHTGQNLEEIAKSMERDNFMS 187
Query: 192 ASEACDWGVVDKVLMS 207
++A ++G++DKVL
Sbjct: 188 PTQAKEFGIIDKVLAH 203
>gi|315499702|ref|YP_004088505.1| endopeptidase clp [Asticcacaulis excentricus CB 48]
gi|315417714|gb|ADU14354.1| Endopeptidase Clp [Asticcacaulis excentricus CB 48]
Length = 209
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 125/204 (61%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + L+P V+EQ++RGER+YDIYSR+LKERI+F+TG ED MAT ICAQLLFL
Sbjct: 1 MRDPVENLTSYLIPTVIEQSSRGERAYDIYSRMLKERIIFLTGPFEDGMATSICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGG VT+ +AIYDTMQ+IK P++T CMG AAS GSL+L AGE G
Sbjct: 61 ESENPKKEISMYINSPGGQVTSALAIYDTMQYIKSPVTTVCMGMAASAGSLILQAGEAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LPN++I++HQPSGG G ASDIE A+DI K K+ LNEIYVK+ G+ Y+ +E+TLDR
Sbjct: 121 RISLPNSKIMVHQPSGGARGMASDIEIQAEDIRKTKKLLNEIYVKHTGQPYDVIERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D M+A+EA ++G++D V R D
Sbjct: 181 DRYMTAAEAKEFGLIDHVYEKRTD 204
>gi|241758856|ref|ZP_04756969.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
flavescens SK114]
gi|319638311|ref|ZP_07993074.1| ATP-dependent Clp protease proteolytic subunit [Neisseria mucosa
C102]
gi|241321064|gb|EER57277.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
flavescens SK114]
gi|317400584|gb|EFV81242.1| ATP-dependent Clp protease proteolytic subunit [Neisseria mucosa
C102]
Length = 206
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 156/197 (79%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPHVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP +GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLAGQASDIEIHAKELLKIKEKLNRLLAKHCDRDLADLERDTDRDNYMSADEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R ++
Sbjct: 189 KEYGLIDQVLENRASLQ 205
>gi|307177704|gb|EFN66732.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Camponotus floridanus]
Length = 234
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 114/207 (55%), Positives = 159/207 (76%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ L VP+VVEQ+ RGER+YDIYSRLLKERI+ + G I D +++ + AQLLFL++
Sbjct: 16 QKMSSRNLNFVPIVVEQSGRGERAYDIYSRLLKERIICLMGPITDDVSSAVVAQLLFLQS 75
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+ + I LYINSPGG VTAG+ IYDTMQ++ PP+ST+C+GQA SM SLLL+AG KGMR
Sbjct: 76 ESSKNPIHLYINSPGGSVTAGLGIYDTMQYVLPPVSTWCVGQACSMASLLLAAGTKGMRH 135
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNARI+ HQPSGG GQA+DI+ A +I+K+K+++NE+YVK+ G+ E++EK ++RD+
Sbjct: 136 SLPNARIMTHQPSGGVQGQATDIQIQALEIIKLKKQINELYVKHTGQDLEKIEKGMERDN 195
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
MS +EA ++G++DKVL + E
Sbjct: 196 FMSPTEAKEFGIIDKVLAHPMQEESAE 222
>gi|313884960|ref|ZP_07818712.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eremococcus coleocola ACS-139-V-Col8]
gi|312619651|gb|EFR31088.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eremococcus coleocola ACS-139-V-Col8]
Length = 200
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 150/200 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGER+YDIYSRLLK+RI+ ++G++ D MA + AQLLFL+A++P K+I
Sbjct: 1 MNLVPTVIENTSRGERAYDIYSRLLKDRIIMLSGEVNDAMANSVIAQLLFLDAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMA+YDTMQFI + T +G AASMGS+LL+AG KG R+ALPNA +
Sbjct: 61 YLYINSPGGSVTAGMAMYDTMQFINADVQTIVIGMAASMGSVLLAAGTKGKRWALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ + RLN+I G+ E ++K DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILLTRDRLNKILSDATGQDLEVIQKDTDRDNFMTAQQA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
D+G++D ++ + ++EK
Sbjct: 181 LDYGLIDGIMENAKKLKEKK 200
>gi|255658239|ref|ZP_05403648.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
gi|260849549|gb|EEX69556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mitsuokella
multacida DSM 20544]
Length = 199
Score = 234 bits (598), Expect = 5e-60, Method: Composition-based stats.
Identities = 114/196 (58%), Positives = 157/196 (80%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVE++N GER+YDIYSRLLK+RI+F+ G I+D +A + AQLLFLE+E+P K+I LYIN
Sbjct: 1 MVVERSNTGERAYDIYSRLLKDRIIFLGGPIDDAVANTVVAQLLFLESEDPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+IKP +ST C+GQAASMG+LLL+AG KG R+ALPNARI++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGALLLTAGAKGKRYALPNARIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQ++DI+ A++I +I+ +N+I V++ GK E V + +RD+ M+A EA +G+
Sbjct: 121 LGGAQGQSTDIQIQAREIQRIREVINDILVESTGKDRETVVQDTERDNFMTAEEAKAYGL 180
Query: 201 VDKVLMSRIDIEEKSK 216
VD+V+ + +KS+
Sbjct: 181 VDEVITRPVKKGKKSE 196
>gi|149186485|ref|ZP_01864797.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
gi|148829712|gb|EDL48151.1| ATP-dependent Clp protease [Erythrobacter sp. SD-21]
Length = 241
Score = 234 bits (597), Expect = 5e-60, Method: Composition-based stats.
Identities = 133/215 (61%), Positives = 172/215 (80%), Gaps = 2/215 (0%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F G +D + LVP VVEQ++RGER++DI+SRLL+ERIVFVTGQ+ED MA+LI A
Sbjct: 15 AFGGRFTRDP--ITGALVPTVVEQSSRGERAFDIFSRLLRERIVFVTGQVEDTMASLIVA 72
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K IS+YINSPGGVVTAGMAI+DTMQ+IKP +ST C+GQAASMGS LL+A
Sbjct: 73 QLLFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAA 132
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
GE GMR ALPNARI++HQPSGG G ASDIE A++I++I++R+N++YV+ GK+ E+E
Sbjct: 133 GEPGMRIALPNARIMVHQPSGGARGMASDIEIQAREILRIRKRMNDLYVQYTGKSLTEIE 192
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K +DRD + A EA +G+VDKV +R + E +
Sbjct: 193 KAMDRDTFLEAEEAMKFGIVDKVFEARPENEGDDE 227
>gi|330684877|gb|EGG96562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU121]
Length = 196
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 104/191 (54%), Positives = 148/191 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + QI+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG R+ALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I+ + G++ E++++ DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRIFSERTGQSIEKIQQDTDRDNFLTAEEA 180
Query: 196 CDWGVVDKVLM 206
+G+VD+V+
Sbjct: 181 KAYGLVDEVME 191
>gi|225423749|ref|XP_002277069.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 241
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 152/193 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERIV + G I D A ++ AQLLFLE+ENP K I
Sbjct: 29 ALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIH 88
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V+AG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG KG R ALPNA I+
Sbjct: 89 MYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIM 148
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA D+ H + I+++ LN +Y K+ G++ + ++K +DRD+ M+ EA
Sbjct: 149 IHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAK 208
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 209 EFGIIDEVIDQRP 221
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 147/195 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN+I + G++ E+++K DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D V+
Sbjct: 181 KEYGLIDNVMQPEDK 195
>gi|71901066|ref|ZP_00683176.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|71729193|gb|EAO31314.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
Length = 208
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 122/201 (60%), Positives = 163/201 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+D+MA L+ AQLLFLEAE
Sbjct: 2 DDVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLVVAQLLFLEAE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+I++YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+A
Sbjct: 62 NPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + +RD+
Sbjct: 122 LPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA +A +G+VD+V R +
Sbjct: 182 KSAVDAQAYGLVDQVFGQRQE 202
>gi|329114674|ref|ZP_08243433.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
gi|326696154|gb|EGE47836.1| ATP-dependent Clp protease proteolytic subunit 1 [Acetobacter
pomorum DM001]
Length = 237
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 131/215 (60%), Positives = 171/215 (79%), Gaps = 1/215 (0%)
Query: 3 FEGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
G +D ++F LVPMVVEQT+RGER++DIYSRLL+ERI+F+TG + D +A+LI A
Sbjct: 18 MSGMRDRDPVEIFSNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVASLISA 77
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+LE+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+
Sbjct: 78 QLLYLESVNPNKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAG 137
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
GEKG RFALPNAR+++HQPSGG GQASDIE A++I+ I+++LNEIY ++ G+T EE+E
Sbjct: 138 GEKGRRFALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQKLNEIYREHTGRTLEEIE 197
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ L+RD MSA EA +G+VD+V+ E K
Sbjct: 198 QKLERDTYMSAHEAQSFGIVDEVISHHKATETGKK 232
>gi|18203149|sp|Q9JZ38|CLPP_NEIMB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|316984112|gb|EFV63090.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
meningitidis H44/76]
gi|325140464|gb|EGC62985.1| endopeptidase Clp [Neisseria meningitidis CU385]
gi|325200063|gb|ADY95518.1| endopeptidase Clp [Neisseria meningitidis H44/76]
gi|325205915|gb|ADZ01368.1| endopeptidase Clp [Neisseria meningitidis M04-240196]
Length = 204
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 7 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 67 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 126
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 127 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCDRDLADLERDTDRDNFMSAEEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D++L +R +
Sbjct: 187 KEYGLIDQILENRASLR 203
>gi|238898003|ref|YP_002923683.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
gi|259585958|sp|C4K4P2|CLPP_HAMD5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|229465761|gb|ACQ67535.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Candidatus Hamiltonella defensa 5AT (Acyrthosiphon
pisum)]
Length = 215
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 127/201 (63%), Positives = 166/201 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGER+YDIYSR+LKER++F+TGQ+E+HMA LI AQ+LFLEAENP+K+I
Sbjct: 14 MTLVPMVVEQTSRGERAYDIYSRMLKERVIFLTGQVEEHMANLIVAQMLFLEAENPEKDI 73
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+TAGM+IYDTMQFI P +ST C+GQA SMG+ LL+AG K R+ LPNAR+
Sbjct: 74 YLYINSPGGVITAGMSIYDTMQFITPDVSTICIGQACSMGAFLLAAGAKSKRYCLPNARV 133
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+K+K+R+N++ + KT + +EK +RDH +SA EA
Sbjct: 134 MIHQPLGGFQGQASDIEIHAKEILKVKKRMNDLMAIHTKKTLKIIEKDTERDHFLSAEEA 193
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G+VD VL R D++ SK
Sbjct: 194 KKYGLVDCVLTERKDVKNFSK 214
>gi|323139086|ref|ZP_08074144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylocystis
sp. ATCC 49242]
gi|322395650|gb|EFX98193.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylocystis
sp. ATCC 49242]
Length = 210
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 141/210 (67%), Positives = 179/210 (85%), Gaps = 1/210 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D +V+ L+P V+E T+RGER +DIYSRLL+ERI+FVTG IEDHMA++I AQLLFL
Sbjct: 1 MRDPIEVYSQYLIPQVIENTSRGERGFDIYSRLLRERIIFVTGPIEDHMASVIIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEISLYINSPGGVVT+G+AIYDTMQFIKP +ST C+GQAASMGSLLL AG G+
Sbjct: 61 ESENPKKEISLYINSPGGVVTSGLAIYDTMQFIKPKVSTLCVGQAASMGSLLLCAGADGL 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ALPNAR++LHQPSGGF GQASDI+RHA+DI+K+K+RLN+IYV++ GK Y+ +E+TLDR
Sbjct: 121 RYALPNARVMLHQPSGGFQGQASDIQRHAEDILKVKKRLNDIYVRHTGKDYDTIERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
DH MSA EA +G++D V R + E ++K
Sbjct: 181 DHFMSAEEAKSFGIIDSVQEKRAEDETEAK 210
>gi|56751593|ref|YP_172294.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|3023500|sp|O34125|CLPP2_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460442|sp|Q5N1P6|CLPP3_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|15620530|gb|AAL03914.1|U30252_2 ClpP2 [Synechococcus elongatus PCC 7942]
gi|2351823|gb|AAB68677.1| ATP-dependent Clp protease, proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686552|dbj|BAD79774.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
Length = 240
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 108/191 (56%), Positives = 142/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VP VVEQ+ RGER++DIYSRLL+ERIVF+ ++D +A I AQLLFLEAE+P+K+I
Sbjct: 36 AIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQ 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ + P ++T C G AASMG+ LLS G +G R ALP+ARI+
Sbjct: 96 LYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ K LN++ ++ G+ E++E DRD MS EA
Sbjct: 156 IHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAK 215
Query: 197 DWGVVDKVLMS 207
+G++D+VL
Sbjct: 216 AYGLIDQVLTR 226
>gi|313673004|ref|YP_004051115.1| ATP-dependent clp protease proteolytic subunit clpp
[Calditerrivibrio nitroreducens DSM 19672]
gi|312939760|gb|ADR18952.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Calditerrivibrio nitroreducens DSM 19672]
Length = 195
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 110/195 (56%), Positives = 149/195 (76%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P V+EQT RGER YDIYSRLLK+RI+F+ I+D +A I AQ+LFLEAE+P+K+
Sbjct: 1 MSYYIPYVIEQTGRGERVYDIYSRLLKDRIIFLGTAIDDTVANSIVAQMLFLEAEDPKKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G+AI+DTM +IKP +ST C+GQAASMG++LL+ G KG RFALPN R
Sbjct: 61 IYLYINSPGGVITSGLAIFDTMNYIKPDVSTICIGQAASMGAVLLACGAKGKRFALPNTR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GGF GQA DIE A++I+++K ++NEI + K E+++ DRD MSA E
Sbjct: 121 IMIHQPLGGFQGQAKDIEIQAKEILRLKSKINEILAERTSKPIEQIDADCDRDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D+V+ R
Sbjct: 181 AKAYGLIDEVIEKRA 195
>gi|261401252|ref|ZP_05987377.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
lactamica ATCC 23970]
gi|269208735|gb|EEZ75190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
lactamica ATCC 23970]
Length = 206
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 154/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAG KG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGGKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLGGQASDIEIHARELLKIKEKLNRLMAKHCDRDLADLERDTDRDNFMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D+VL +R+ +
Sbjct: 189 KEYGLIDQVLENRVSLR 205
>gi|152991609|ref|YP_001357330.1| ATP-dependent Clp protease proteolytic subunit [Sulfurovum sp.
NBC37-1]
gi|166214717|sp|A6Q675|CLPP_SULNB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|151423470|dbj|BAF70973.1| ATP-dependent Clp protease, proteolytic subunit [Sulfurovum sp.
NBC37-1]
Length = 195
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 153/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT RGERSYDIYSRLLK+RI+ ++G++ D +A+ I AQLLFLEA++P K+I
Sbjct: 1 MSYIPYVVEQTGRGERSYDIYSRLLKDRIIMLSGEVNDQVASSIVAQLLFLEAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGV+T+G++++DTM +IKP I T C+GQAASMG+ LL++G KG R+ALP+ARI
Sbjct: 61 YFYINSPGGVITSGLSMFDTMNYIKPDIVTICIGQAASMGAFLLASGTKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ++DI+ AQ+I ++K LNEI + GKT + +EK +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQSTDIQIQAQEIQRLKDTLNEIMAEKTGKTAKRIEKDTERDNFMSAKEA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKVL
Sbjct: 181 VEYGLIDKVLTK 192
>gi|301091655|ref|XP_002896007.1| ATP-dependent Clp protease proteolytic subunit, putative
[Phytophthora infestans T30-4]
gi|262095668|gb|EEY53720.1| ATP-dependent Clp protease proteolytic subunit, putative
[Phytophthora infestans T30-4]
Length = 221
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 116/210 (55%), Positives = 159/210 (75%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
A++ + LVPMV+EQ+ RGER +DIYSRLLKERIVFV G + D MA+L+ AQLLFL
Sbjct: 11 ARRGFHSIMNSLVPMVLEQSPRGERVFDIYSRLLKERIVFVHGPVNDDMASLVTAQLLFL 70
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+K++ +YINSPGG+V++G+AIYDTMQ+I+P ++T CMGQAASMGSLLL+ G G
Sbjct: 71 ESENPEKDVHMYINSPGGIVSSGLAIYDTMQYIQPKVNTLCMGQAASMGSLLLAGGASGC 130
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNARI++HQPSGG G ASDI A++I+K++ RLN +Y + GK + +E+ +DR
Sbjct: 131 RSALPNARIMIHQPSGGAQGMASDIAIQAEEIIKLRTRLNGLYASHTGKPLKVIEQAMDR 190
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D M EA ++G+VD ++ +R + K
Sbjct: 191 DLFMDPREAQEFGIVDSIIANRKTPQSPGK 220
>gi|170078453|ref|YP_001735091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
gi|169886122|gb|ACA99835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7002]
Length = 198
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 146/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ Q+ D +A LI AQLLFLEA++P+K+I L
Sbjct: 1 MIPTVIESSGRGERAFDIYSRLLRERIVFLGTQVNDEIANLIVAQLLFLEADDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGM I+DTM ++P + T C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K +LN+ + G+ E++E DRD MSA+EA D
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGKLNQHLADHTGQPLEKIEIDTDRDFFMSAAEAKD 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 181 YGLIDQVIERSP 192
>gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
Length = 233
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 147/201 (73%), Gaps = 1/201 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ ++P+V+EQ+ GER++DIYSRLL+ERIVF+ ++D +A I AQLL+LEAE+P+
Sbjct: 26 NSLANVLPVVIEQSGMGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPE 85
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V AG+AIYDTMQ I+P ++T C G AASMG+ LL G G R +LP+
Sbjct: 86 KDIQLYINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPS 145
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQASDI A++I+ IK+RLN + + G+ Y+ + +RD MSA
Sbjct: 146 SRIMIHQPLGGAQGQASDIAIQAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSA 205
Query: 193 SEACDWGVVDKVLMSRIDIEE 213
EA ++G++D V+ SR ++ +
Sbjct: 206 VEAKEYGLIDLVI-SRPELPD 225
>gi|325266755|ref|ZP_08133428.1| ATP-dependent Clp protease, protease subunit [Kingella
denitrificans ATCC 33394]
gi|324981757|gb|EGC17396.1| ATP-dependent Clp protease, protease subunit [Kingella
denitrificans ATCC 33394]
Length = 209
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 122/196 (62%), Positives = 158/196 (80%), Gaps = 2/196 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERI+F+ G ++DH A L+ AQLLFLE+ENP K+I
Sbjct: 13 LVPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVDDHTANLVVAQLLFLESENPDKDIYF 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM+FIKP + T C+GQAASMG+ LLSAG KG RFALPN+RI++
Sbjct: 73 YINSPGGSVTAGMSIYDTMKFIKPDVQTLCLGQAASMGAFLLSAGTKGKRFALPNSRIMI 132
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++K+K +LN+I + GK+ EEVE+ DRD+ MSA EA
Sbjct: 133 HQPLISGGLGGQASDIEIHARELLKLKEKLNKILADHTGKSIEEVERDTDRDNFMSAQEA 192
Query: 196 CDWGVVDKVLMSRIDI 211
++G++DKV+ SR D+
Sbjct: 193 MEYGLIDKVITSRNDV 208
>gi|322384476|ref|ZP_08058158.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321150686|gb|EFX44161.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 193
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 148/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMVVE RGERSYDIYSRLLK+RIVF+ Q+ D +A I AQLLFL A++P K+I
Sbjct: 1 MSFIPMVVEPDARGERSYDIYSRLLKDRIVFLGTQVNDAVANSIIAQLLFLAAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG G R+ALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLNAGAVGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A+ I+K++ LN I + G+ E++E+ DRD+ MSASEA
Sbjct: 121 MIHQPLGGAEGQATDIEIRAKRIIKMRENLNRILSERTGQPLEKIERDTDRDYFMSASEA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKV+
Sbjct: 181 KEYGLIDKVIER 192
>gi|315650622|ref|ZP_07903682.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
saburreum DSM 3986]
gi|315487119|gb|EFU77441.1| ATP-dependent Clp protease proteolytic subunit [Eubacterium
saburreum DSM 3986]
Length = 193
Score = 234 bits (597), Expect = 6e-60, Method: Composition-based stats.
Identities = 105/192 (54%), Positives = 148/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGER++DIYSRLLK+RI+F+ ++ D A+L+ AQ+LFLE+E+P K+I
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG V AGMAIYDTMQ++K +ST CMG AASM + LL+ G KG R+ALPNA I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I A+ I+K + ++N+I +N + E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTNQPIEVIERDTERDNYMSAKEA 180
Query: 196 CDWGVVDKVLMS 207
D+G++DKV+
Sbjct: 181 LDYGIIDKVIEH 192
>gi|28198386|ref|NP_778700.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
Temecula1]
gi|182681028|ref|YP_001829188.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
M23]
gi|32129456|sp|Q87E51|CLPP_XYLFT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706560|sp|B2I8K3|CLPP_XYLF2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28056456|gb|AAO28349.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
Temecula1]
gi|182631138|gb|ACB91914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xylella
fastidiosa M23]
gi|307579496|gb|ADN63465.1| ATP-dependent Clp protease proteolytic subunit [Xylella fastidiosa
subsp. fastidiosa GB514]
Length = 208
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 163/201 (81%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G I+D+MA LI AQLLFLEAE
Sbjct: 2 DDVTKALNLVPMVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDYMANLIVAQLLFLEAE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP+K+I++YINSPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+A
Sbjct: 62 NPEKDINIYINSPGGVVTAGMAIYDTMQYIKPAVSTICVGQAASMGALLLASGASGKRYA 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + +RD+
Sbjct: 122 LPNSRVMIHQPLGGFQGQATDIDIHAREILALRARLNEILAKHTGQSLETIAHDTERDNF 181
Query: 190 MSASEACDWGVVDKVLMSRID 210
SA +A +G+VD+V R +
Sbjct: 182 KSAVDAQAYGLVDQVFGQRQE 202
>gi|81301334|ref|YP_401542.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
gi|81170215|gb|ABB58555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 244
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 108/191 (56%), Positives = 142/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VP VVEQ+ RGER++DIYSRLL+ERIVF+ ++D +A I AQLLFLEAE+P+K+I
Sbjct: 40 AIVPTVVEQSGRGERAFDIYSRLLRERIVFLGTGVDDAVADSIVAQLLFLEAEDPEKDIQ 99
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ + P ++T C G AASMG+ LLS G +G R ALP+ARI+
Sbjct: 100 LYINSPGGSVTAGMAIYDTMQQVAPDVATICFGLAASMGAFLLSGGAQGKRMALPSARIM 159
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ K LN++ ++ G+ E++E DRD MS EA
Sbjct: 160 IHQPLGGAQGQAVDIEIQAREILYHKSTLNDLLAQHTGQPLEKIEVDTDRDFFMSPEEAK 219
Query: 197 DWGVVDKVLMS 207
+G++D+VL
Sbjct: 220 AYGLIDQVLTR 230
>gi|88809960|ref|ZP_01125465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
gi|88786150|gb|EAR17312.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 7805]
Length = 229
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 147/194 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQLLFLEAE+P+K+I
Sbjct: 29 GVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQLLFLEAEDPEKDIQ 88
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI+
Sbjct: 89 VYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIM 148
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ +++ + DRD+ +S SEA
Sbjct: 149 IHQPMGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLDKIAEDTDRDYFLSPSEAV 208
Query: 197 DWGVVDKVLMSRID 210
D+G++D+V+ S D
Sbjct: 209 DYGLIDRVVDSLKD 222
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 234 bits (597), Expect = 7e-60, Method: Composition-based stats.
Identities = 111/191 (58%), Positives = 157/191 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMV+EQ+ RGER+YDIYSRLLK+RI+F+ +I+D +A + AQLLFLE+E+P K+I L
Sbjct: 2 LIPMVIEQSGRGERAYDIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+++G+AIYDTMQ+IK P+ST C+GQAASM ++LL+ G G R ALPNAR+++
Sbjct: 62 YINSPGGVISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE HA++I+KI+ ++N+I VK+ G+T + ++ DRD MSA+EA +
Sbjct: 122 HQPLGGAHGQATDIEIHAKEILKIREKINDILVKHTGQTRKRIKADTDRDFYMSAAEALE 181
Query: 198 WGVVDKVLMSR 208
+ ++DKV+ SR
Sbjct: 182 YSIIDKVIESR 192
>gi|297616502|ref|YP_003701661.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
gi|297144339|gb|ADI01096.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Syntrophothermus lipocalidus DSM 12680]
Length = 203
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 152/203 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP+VVEQT+RGER+YDIYSRLLK+RIVF+ I+D +A LI AQ LFLEAE+P
Sbjct: 1 MNKLSYLVPIVVEQTSRGERAYDIYSRLLKDRIVFLGSPIDDQVANLIIAQFLFLEAEDP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I YINSPGG ++AGMAI+DTMQ+++P +ST C+G AASMG+ LL+AG KG RFALP
Sbjct: 61 DKDIHFYINSPGGSISAGMAIFDTMQYLRPDVSTICVGMAASMGAFLLAAGAKGKRFALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA+DIE HA+ IV +K+RLN+I + G+ E +E+ ++RD M+
Sbjct: 121 NSEIMIHQPIGGTQGQATDIEIHARRIVNLKKRLNQILAERTGQKLEVIERDVERDFFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEEK 214
A EA +G++D + +K
Sbjct: 181 AEEAKAYGIIDDIFYESKRKGKK 203
>gi|115311358|sp|Q2SK36|CLPP_HAHCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 204
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 121/197 (61%), Positives = 154/197 (78%), Gaps = 1/197 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
++ LVPMVVEQT RGERSYDIYSRLLKERI+F+ GQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 5 EIANALVPMVVEQTARGERSYDIYSRLLKERIIFLVGQVEDHMANLVVAQLLFLESENPD 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAG++IYDTMQFIKP +ST C+GQAASMG+LLLS G G R+ LP+
Sbjct: 65 KDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQAASMGALLLSGGAAGKRYCLPH 124
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+R+++HQP GG GQASDIE HA++I+ ++ +LN I K+ G+ E + + DRD M
Sbjct: 125 SRVMIHQPLLGGLQGQASDIEIHAKEILLLREKLNNILSKHTGQDIETIARDTDRDKFMD 184
Query: 192 ASEACDWGVVDKVLMSR 208
A A ++G++D VL R
Sbjct: 185 AEMAKNYGLIDSVLDKR 201
>gi|126649375|ref|ZP_01721616.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
B14905]
gi|169826051|ref|YP_001696209.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
sphaericus C3-41]
gi|226706460|sp|B1HVR0|CLPP_LYSSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126593700|gb|EAZ87623.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
B14905]
gi|168990539|gb|ACA38079.1| ATP-dependent Clp protease proteolytic subunit 1 [Lysinibacillus
sphaericus C3-41]
Length = 197
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 148/197 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL+AE+P K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ IKP + T C+G AASMG+ LL+AGE G RFALPNA +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQIIKPKVQTICIGMAASMGAFLLAAGEPGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ E + + DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNGILSERTGQPLEVIARDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D ++ D +
Sbjct: 181 KEYGLIDHIMHRSTDNK 197
>gi|28870881|ref|NP_793500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213968834|ref|ZP_03396975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|28854130|gb|AAO57195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|213926437|gb|EEB59991.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
Length = 216
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 154/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LI AQLLFLEAENP K+I
Sbjct: 21 GLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIH 80
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+ G +G R LPN+R++
Sbjct: 81 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMM 140
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDI+ HA++I+ I+ RLN + + G++ E +E+ +RD+ MSA A
Sbjct: 141 IHQPLGGFQGQASDIDIHAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAA 200
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 201 EYGLIDSVINKRQ 213
>gi|56460113|ref|YP_155394.1| ATP-dependent Clp protease proteolytic subunit [Idiomarina
loihiensis L2TR]
gi|67460202|sp|Q5QXN8|CLPP_IDILO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56179123|gb|AAV81845.1| Protease subunit of ATP-dependent Clp protease [Idiomarina
loihiensis L2TR]
Length = 206
Score = 234 bits (596), Expect = 7e-60, Method: Composition-based stats.
Identities = 128/204 (62%), Positives = 161/204 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D +D LVPMVVEQT++GERSYDIYSRLLKER++F GQ+EDHMA LI AQLLFL
Sbjct: 1 MSSDIQDPMAQLVPMVVEQTSKGERSYDIYSRLLKERVIFCCGQVEDHMANLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E++NP K+I LYINSPGGVVTAGMAIYDTM+FIKP +ST CMGQAASMG+ LL+ G +G
Sbjct: 61 ESDNPDKDIYLYINSPGGVVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLAGGAQGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ LPN+R+++HQP GGF GQASD E HA+ I+ +K RLN + +N G+ YE+V + DR
Sbjct: 121 RYCLPNSRVMIHQPLGGFQGQASDFEIHAKQILDLKERLNRMLAENTGQDYEKVARDTDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
DH +SA E+ D+G+VD +L R +
Sbjct: 181 DHFLSAEESIDYGLVDGILRQRGE 204
>gi|261380957|ref|ZP_05985530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
subflava NJ9703]
gi|284796216|gb|EFC51563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria
subflava NJ9703]
Length = 206
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 155/197 (78%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G + D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLIGPVTDESANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVTAGMSIYDTMNFIKPHVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP +GQASDIE HA++++KIK +LN + K+C + ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLAGQASDIEIHAKELLKIKEKLNRLLAKHCDRDLADLERDTDRDNYMSADEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
+G++D+VL +R ++
Sbjct: 189 KKYGLIDQVLENRASLQ 205
>gi|121997404|ref|YP_001002191.1| ATP-dependent Clp protease proteolytic subunit [Halorhodospira
halophila SL1]
gi|226706517|sp|A1WUM7|CLPP_HALHL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|121588809|gb|ABM61389.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halorhodospira
halophila SL1]
Length = 210
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 117/196 (59%), Positives = 157/196 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDI+SRLLKER++F+ G +ED+ A L+ AQLLFLE+ENP K++
Sbjct: 15 GLVPMVVEQSARGERAYDIFSRLLKERVIFLVGPVEDYQANLLVAQLLFLESENPDKDVH 74
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAG+AIYDTMQFIKP ++T C+GQAASMG+LLL+AG +G R ALPN+R++
Sbjct: 75 LYINSPGGSVTAGLAIYDTMQFIKPDVATLCVGQAASMGALLLAAGAEGKRHALPNSRMM 134
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DI+ HA++I+ ++ RLN I + G+ E + + DRD+ M+A A
Sbjct: 135 IHQPLGGFQGQATDIDIHAREILSMRDRLNTILAHHTGQDIETIRQDTDRDNFMAAEAAA 194
Query: 197 DWGVVDKVLMSRIDIE 212
+G++D+VL SR E
Sbjct: 195 QYGLIDRVLTSRGASE 210
>gi|115459516|ref|NP_001053358.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|113564929|dbj|BAF15272.1| Os04g0525600 [Oryza sativa Japonica Group]
gi|215768496|dbj|BAH00725.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 309
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 85 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 144
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG +G R ALPNAR++
Sbjct: 145 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVM 204
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI HA++I+K++ RLN+IY K+ + + +E+ ++RD M EA
Sbjct: 205 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAH 264
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ R
Sbjct: 265 DWGLIDEVIEHRP 277
>gi|38344435|emb|CAE05641.2| OSJNBa0038O10.7 [Oryza sativa Japonica Group]
gi|116310954|emb|CAH67891.1| OSIGBa0153E02-OSIGBa0093I20.20 [Oryza sativa Indica Group]
gi|125549084|gb|EAY94906.1| hypothetical protein OsI_16707 [Oryza sativa Indica Group]
Length = 259
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 35 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVH 94
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG +G R ALPNAR++
Sbjct: 95 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVM 154
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI HA++I+K++ RLN+IY K+ + + +E+ ++RD M EA
Sbjct: 155 IHQPSGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAH 214
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ R
Sbjct: 215 DWGLIDEVIEHRP 227
>gi|332186782|ref|ZP_08388524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingomonas
sp. S17]
gi|332013115|gb|EGI55178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingomonas
sp. S17]
Length = 229
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 121/199 (60%), Positives = 162/199 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVP+V+EQ+NRGERS+DI+SRLL+ERI+FVTG +ED MA+LICAQLLFLE+ENP+K+I
Sbjct: 27 GLVPIVIEQSNRGERSFDIFSRLLRERIIFVTGGVEDGMASLICAQLLFLESENPKKDIY 86
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAGMAI+DTMQ+I+P + T C+GQAASMGS LL+AGE GMR A N+RI+
Sbjct: 87 MYINSPGGVVTAGMAIHDTMQYIRPRVGTLCIGQAASMGSFLLAAGEPGMRVATTNSRIM 146
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+DIE A++I++++ LN +Y K GK EE+E+ +DRD MS+ EA
Sbjct: 147 IHQPSGGAQGMAADIEIQAREILRMRHFLNSLYAKYTGKPLEEIERAMDRDKFMSSEEAK 206
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++D+V R + +
Sbjct: 207 EFGLIDQVFDKRPVPADDA 225
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 111/196 (56%), Positives = 153/196 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL AE+P+KEIS
Sbjct: 1 NLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ ++
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 180
Query: 197 DWGVVDKVLMSRIDIE 212
++G++DK+L D +
Sbjct: 181 EYGLIDKILTHTEDKK 196
>gi|242309637|ref|ZP_04808792.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
gi|239523638|gb|EEQ63504.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pullorum MIT 98-5489]
Length = 196
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 151/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+V+E+T RGERSYDIYSRLLK+RI+ ++GQI+D +A+ I AQLLFLEAE+PQK+
Sbjct: 1 MSYYVPIVIEKTGRGERSYDIYSRLLKDRIIMLSGQIDDGIASSIVAQLLFLEAEDPQKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+G++IYDTM +IKP I T C+GQAASMG+ LLS G KG R++LPN+R
Sbjct: 61 IYLYINSPGGVVTSGLSIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LNEI N ++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAKEILRLKATLNEILAANTNQSLEKISKDTDRDFFMSAQE 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D VL
Sbjct: 181 AKKYGLIDNVLTK 193
>gi|23099911|ref|NP_693377.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
gi|60389793|sp|Q8ENM5|CLPP_OCEIH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22778142|dbj|BAC14412.1| ATP-dependent Clp protease proteolytic subunit [Oceanobacillus
iheyensis HTE831]
Length = 193
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 116/193 (60%), Positives = 155/193 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQTNRGER+YDIYSRLLK+RI+ + I+D+++ I AQLLFLEAE+P K+I
Sbjct: 1 MNLVPTVIEQTNRGERAYDIYSRLLKDRIILLGSGIDDNVSNSIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ I
Sbjct: 61 SLYINSPGGSITAGMAIYDTMNFIKPNVSTICIGMAASMGAFLLTAGEKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA+ I+ IKRR+NEI + G+ E +E+ +RD+ M+A ++
Sbjct: 121 MIHQPLGGTQGQATDIEIHAKRIIDIKRRMNEIMAEKTGQPIEVIERDTERDNFMTADQS 180
Query: 196 CDWGVVDKVLMSR 208
++G++DK+L +
Sbjct: 181 VEYGLIDKILERK 193
>gi|302386739|ref|YP_003822561.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
saccharolyticum WM1]
gi|302197367|gb|ADL04938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
saccharolyticum WM1]
Length = 195
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 115/192 (59%), Positives = 152/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T++GERSYDIYSRLLKERI+F+ ++ D A+L+ AQLLFLEAE+P K+I
Sbjct: 1 MSLVPYVIESTSKGERSYDIYSRLLKERIIFLGEEVSDVSASLVVAQLLFLEAEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTM +IK +ST CMG AASMG+ LL+ G KG RFALPNA +
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMNYIKCDVSTVCMGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I A++I+KIK+RLNEI N G+ YE +E+ +RD+ M+A EA
Sbjct: 121 MIHQPSGGAKGQATEIRIVAENILKIKKRLNEILSANTGQPYEVIERDTERDNYMNAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G++D ++ S
Sbjct: 181 KAYGLIDDIIYS 192
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 115/192 (59%), Positives = 157/192 (81%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+EQT RGER+YDIYSRLL++RIV + I+DH+A LI AQLLFLEA++P+K+I +
Sbjct: 8 LVPIVIEQTPRGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDIYM 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGMAIYDTMQ+IKP + T C+GQAASMG++LL+AG G R+ALP++RI++
Sbjct: 68 YINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLLAAGAPGKRYALPHSRIMI 127
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG +GQA+DI HA++I +IK LNEI K+ G+ E +E+ ++RD+ MS+ EA +
Sbjct: 128 HQPLGGITGQATDIIIHAEEIKRIKHMLNEILSKHTGQPLERIERDVERDYFMSSEEARE 187
Query: 198 WGVVDKVLMSRI 209
+G+VD+V+ R
Sbjct: 188 YGIVDRVIAKRQ 199
>gi|83644978|ref|YP_433413.1| ATP-dependent Clp protease proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
gi|83633021|gb|ABC28988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
Length = 213
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 122/210 (58%), Positives = 155/210 (73%), Gaps = 8/210 (3%)
Query: 7 AKKDSEDVFLG-------LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
+D + LVPMVVEQT RGERSYDIYSRLLKERI+F+ GQ+EDHMA L+
Sbjct: 1 MARDDNATMMNKLEIANALVPMVVEQTARGERSYDIYSRLLKERIIFLVGQVEDHMANLV 60
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLLFLE+ENP K+I LYINSPGG VTAG++IYDTMQFIKP +ST C+GQAASMG+LLL
Sbjct: 61 VAQLLFLESENPDKDIHLYINSPGGSVTAGLSIYDTMQFIKPDVSTMCIGQAASMGALLL 120
Query: 120 SAGEKGMRFALPNARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
S G G R+ LP++R+++HQP GG GQASDIE HA++I+ ++ +LN I K+ G+ E
Sbjct: 121 SGGAAGKRYCLPHSRVMIHQPLLGGLQGQASDIEIHAKEILLLREKLNNILSKHTGQDIE 180
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+ + DRD M A A ++G++D VL R
Sbjct: 181 TIARDTDRDKFMDAEMAKNYGLIDSVLDKR 210
>gi|326519674|dbj|BAK00210.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 256
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 120/193 (62%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K I
Sbjct: 30 GLVPMVIEHTSRGERAYDIFSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPAKPIH 89
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 90 LYINSPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 149
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG SGQASDI A++I+K++ RLN+IY K+ G+ + +E+ ++RD M EA
Sbjct: 150 IHQPSGGASGQASDIAIQAKEILKVRDRLNKIYAKHTGQAIDRIEQCMERDMFMDPVEAH 209
Query: 197 DWGVVDKVLMSRI 209
WG++D+V+ R
Sbjct: 210 AWGLIDEVIEHRP 222
>gi|218440358|ref|YP_002378687.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218173086|gb|ACK71819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 203
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 140/192 (72%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL++RIVF+ ++ + +A I AQLLFLE+E+P K+I L
Sbjct: 1 MIPTVIESSGRGERAFDIYSRLLRDRIVFLGQEVTNDLANTIVAQLLFLESEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LL AG K R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLCAGAKDKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN+ G+ E++ + +RD MSA EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAQE 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVINRRP 192
>gi|88607298|ref|YP_505537.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaplasma
phagocytophilum HZ]
gi|115311354|sp|Q2GJB4|CLPP_ANAPZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88598361|gb|ABD43831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaplasma
phagocytophilum HZ]
Length = 197
Score = 234 bits (596), Expect = 8e-60, Method: Composition-based stats.
Identities = 134/197 (68%), Positives = 174/197 (88%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT RGER+YDIYSRLLKERI+FVTG IED MA+LI AQL+FLEAE+P+K+I
Sbjct: 1 MNLVPMVVEQTGRGERAYDIYSRLLKERIIFVTGPIEDEMASLIVAQLVFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGGVVTAG++IYDTMQ+IKP ++T C+GQAASMGSLLL AG GMR ALPN+R+
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYIKPNVATLCLGQAASMGSLLLCAGAPGMRCALPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I++IKRRLNEI+V++ GK+ EE+E +++RD+ M A +A
Sbjct: 121 MIHQPSGGFRGQATDIEIHAREILEIKRRLNEIFVRHTGKSLEEIESSMERDNFMIAEKA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++DKV+ RI+ +
Sbjct: 181 RDFGIIDKVIEKRIEEK 197
>gi|56964790|ref|YP_176521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460456|sp|Q5WDK0|CLPP2_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|56911033|dbj|BAD65560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 195
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 108/192 (56%), Positives = 155/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + ++D++A I AQ+LFL+AE+P+K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSGVDDNVANSIVAQMLFLQAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AG KG R ALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQFIKPDVSTICIGMAASMGAFLLTAGAKGKRMALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D+E HA+ I++++ +LN+I + G+ YE + + DRD+ M+A +A
Sbjct: 121 MIHQPLGGMQGQAADMEIHARRIIQMREKLNQIMAERSGQPYERIARDTDRDNFMTAEQA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKV+ +
Sbjct: 181 KEYGLIDKVIET 192
>gi|50083772|ref|YP_045282.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
ADP1]
gi|60389584|sp|Q6FEP8|CLPP_ACIAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|49529748|emb|CAG67460.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Acinetobacter sp. ADP1]
Length = 201
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DI+SRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYERVARDTDRDNFMTAQAA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDEVLSKRP 201
>gi|170049615|ref|XP_001857723.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
gi|167871378|gb|EDS34761.1| ATP-dependent Clp protease proteolytic subunit [Culex
quinquefasciatus]
Length = 225
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 115/203 (56%), Positives = 153/203 (75%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
S L LVP+VVEQT RGER+YDI+SRLLKERI+ + G I D +++LI AQLLFL++EN
Sbjct: 20 SASRLLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSEN 79
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K I +YINSPGG VTAG+AIYDTMQ++KPP++T+C+GQA SMGSLLL+AG GMR +L
Sbjct: 80 GTKPIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSL 139
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNARI++HQPSGG GQA+DI+ A++I+K+K++L EIY K+ YE + ++RD +
Sbjct: 140 PNARIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYAKHTKSPYETLLAKMERDTFL 199
Query: 191 SASEACDWGVVDKVLMSRIDIEE 213
+ EA G++D VL E
Sbjct: 200 NPEEAQTLGIIDTVLEHPPSSTE 222
>gi|218290814|ref|ZP_03494883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|218239172|gb|EED06373.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
Length = 198
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 112/187 (59%), Positives = 147/187 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQT+RGER+YDIYSRLLK+RIV + I+D +A I AQLLFL A++P+K+I +Y
Sbjct: 5 IPYVIEQTSRGERTYDIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQMY 64
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDTMQ I+P +ST C+G AASMG+ LL+AGEKG R+ALPNA I++H
Sbjct: 65 INSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIMIH 124
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQASDI+ HA+ I+K K +LN + + G+ E +E+ DRDH M+A EA +
Sbjct: 125 QPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAKAY 184
Query: 199 GVVDKVL 205
G++D+VL
Sbjct: 185 GLIDEVL 191
>gi|198283159|ref|YP_002219480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218667656|ref|YP_002425388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247680|gb|ACH83273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218519869|gb|ACK80455.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 214
Score = 234 bits (596), Expect = 9e-60, Method: Composition-based stats.
Identities = 133/197 (67%), Positives = 162/197 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG VPMVVEQT RGERSYDIYSRLLKER+VF+ GQ+ED MA L+ AQLLFLEAENP K+I
Sbjct: 16 LGYVPMVVEQTGRGERSYDIYSRLLKERVVFLVGQVEDMMANLVVAQLLFLEAENPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYDTMQF++P IST C+GQAASMG++LL+AG +G R+ALPNARI
Sbjct: 76 ALYINSPGGSVTAGMAIYDTMQFVRPKISTVCIGQAASMGAVLLAAGAEGKRYALPNARI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQPSGGF GQA DIE H ++I++I+ RLN+I V + G+ E +E+ LDRD MSA EA
Sbjct: 136 MLHQPSGGFQGQAHDIEIHTKEILRIRERLNDILVHHTGQGRERIEQDLDRDFFMSAEEA 195
Query: 196 CDWGVVDKVLMSRIDIE 212
+ +VD V+ R + E
Sbjct: 196 QTYHLVDAVISHRGENE 212
>gi|239907453|ref|YP_002954194.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
gi|259585949|sp|C4XH03|CLPP_DESMR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239797319|dbj|BAH76308.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
magneticus RS-1]
Length = 202
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 114/200 (57%), Positives = 161/200 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+V+E T R ER+YDIYSRLL++RI+ + ++D++A LICAQLLFLE+E+P+KEI
Sbjct: 1 MATIPIVIETTGRTERAYDIYSRLLRDRIILLGSAVDDYVANLICAQLLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVV+AG+AIYDTMQ++ PP+ST C+GQAASMG+LLL AG GMR+ALP++RI
Sbjct: 61 FMYINSPGGVVSAGLAIYDTMQYVMPPVSTLCLGQAASMGALLLCAGATGMRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA++ + + LNEI K+ G++ E ++ +RD+ MSA EA
Sbjct: 121 MIHQPSGGYQGQATDIEIHAKETRRTRETLNEIMAKHTGQSMERIQVDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKVL SR +E+K
Sbjct: 181 VAYGLIDKVLTSRERLEKKD 200
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 233 bits (595), Expect = 9e-60, Method: Composition-based stats.
Identities = 122/194 (62%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVEQT++GERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAE+P+K+I
Sbjct: 1 MALVPIVVEQTSKGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIY TM FIKP ++T C GQA SMG+ LLS G KG RFALPNAR+
Sbjct: 61 YLYINSPGGVVTAGLAIYATMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ+I+K+K L ++ G+ +E+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKVL R
Sbjct: 181 MEYGLIDKVLTHRD 194
>gi|293610272|ref|ZP_06692573.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292827504|gb|EFF85868.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|325124452|gb|ADY83975.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
calcoaceticus PHEA-2]
Length = 201
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQAA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDQVLSKRP 201
>gi|327398620|ref|YP_004339489.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
gi|327181249|gb|AEA33430.1| ATP-dependent Clp protease proteolytic subunit [Hippea maritima DSM
10411]
Length = 205
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+V+E+T +GER+YDIYSRLLK+RI+ + G+I D ++ +I +QLLFLE+E+P+K+I
Sbjct: 1 MNLVPIVIEKTPQGERAYDIYSRLLKDRIIMLNGEINDDVSNVIVSQLLFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IK ++T C+G AASMG+LLL++G KG R++LP++RI
Sbjct: 61 FLYINSPGGSVTAGLAIYDTMQYIKCDVTTICIGSAASMGALLLASGTKGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG SGQA++IE HA++I+++K+ LNEI K+ GK + +EK +RD+ M EA
Sbjct: 121 MIHQPLGGISGQATEIEIHAKEILRLKKLLNEILAKHTGKRLKTIEKDTERDYFMDTKEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++DK++ SR
Sbjct: 181 LAYGIIDKIIYSR 193
>gi|118579613|ref|YP_900863.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
gi|166201831|sp|A1AN85|CLPP_PELPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118502323|gb|ABK98805.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pelobacter
propionicus DSM 2379]
Length = 199
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 155/193 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+PMVVEQ+ RGER+YDIYSRLLKERI+F+ G I+D +A LI AQLLFLEAE+P K+I L
Sbjct: 2 YIPMVVEQSGRGERAYDIYSRLLKERIIFLGGGIDDQVANLIIAQLLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+GMAIYDTM++IK P+ST C+GQAASMG++LL+AGEKG RF+L ++RI++
Sbjct: 62 YINSPGGVVTSGMAIYDTMRYIKAPVSTICVGQAASMGAVLLAAGEKGKRFSLNHSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GGF GQA+DI HA++I+++K LN I G++ E +E DRD+ MSA+EA +
Sbjct: 122 HQPLGGFQGQATDISIHAKEILRMKEELNSILADLTGQSKERIEADTDRDYFMSATEAEE 181
Query: 198 WGVVDKVLMSRID 210
+G++D + D
Sbjct: 182 YGLIDATFTRKPD 194
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 117/197 (59%), Positives = 159/197 (80%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
++ LVP+V+EQT RGER+YDIYSRLL++RIV + I+DH+A LI AQLLFLEA++P+
Sbjct: 3 EILNQLVPIVIEQTPRGERAYDIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPE 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGG VTAGMAIYDTMQ+IKP + T C+GQAASM ++LL+AG KG R++LP+
Sbjct: 63 KDIYMYINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPH 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG SGQA+DI HA++I +IK LNEI K+ G+ +VE+ ++RD+ MSA
Sbjct: 123 SRIMIHQPMGGISGQATDIIIHAEEIKRIKHMLNEIIAKHTGQPLSKVEQDVERDYFMSA 182
Query: 193 SEACDWGVVDKVLMSRI 209
EA ++G+VDKV+ R
Sbjct: 183 YEAMEYGIVDKVIEKRE 199
>gi|289422712|ref|ZP_06424552.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
gi|289156891|gb|EFD05516.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus anaerobius 653-L]
Length = 194
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 149/193 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQ RGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQ+LFLEA++P K+I
Sbjct: 1 MALVPYVVEQDGRGERSYDIYSRLLKDRIIFLGDEVNDQTASLVVAQMLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+AG KG R+ALPN+ +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKADVSTICVGMAASMGAFLLAAGAKGKRYALPNSTV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE H + ++ IK +LN+I + G+ E V+ +RD+ M+A EA
Sbjct: 121 MIHQPLGGTRGQATDIEIHTKYLLSIKEKLNKILAERTGQDLETVKANTERDNFMTADEA 180
Query: 196 CDWGVVDKVLMSR 208
D+G++D+V+ R
Sbjct: 181 RDFGLIDEVIAGR 193
>gi|241696180|ref|XP_002411835.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|215504758|gb|EEC14252.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
Length = 235
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 111/202 (54%), Positives = 152/202 (75%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
S L+P+V+EQT RGER+YDIYSRLLKERIV V G I D +++L+ AQLLFL++E+
Sbjct: 28 SSRRLNPLIPIVIEQTGRGERAYDIYSRLLKERIVCVMGPITDELSSLVVAQLLFLQSES 87
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+K + +YINSPGG VTAG+ IYDTMQ+I PPIST+C+GQA S GSLLL AG GMR +L
Sbjct: 88 NKKPVHMYINSPGGSVTAGLGIYDTMQYIMPPISTWCIGQACSAGSLLLCAGTAGMRHSL 147
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQPSG SGQA+DI+ HA++I+ +KR +N +Y K+ + E +E ++RD M
Sbjct: 148 PHSRIMIHQPSGQASGQATDIQIHAEEILHLKRVINGMYAKHTKQPLETIESAMERDRFM 207
Query: 191 SASEACDWGVVDKVLMSRIDIE 212
SA +A ++G++D VL E
Sbjct: 208 SAEQAKEFGIIDVVLEHPPTFE 229
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 144/190 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+VVEQ+ RGER++DIYSRLL+ERI+F+ Q+++ +A LI AQLLFL++E+ +K+I L
Sbjct: 30 MIPIVVEQSGRGERAFDIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSEDSEKDIYL 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AGM I+DTM+ I+P + T C G ASMG+ LLSAG KG R +LP++RI++
Sbjct: 90 YINSPGGSVMAGMGIFDTMKHIRPDVCTICTGLGASMGAFLLSAGAKGKRMSLPHSRIMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ K+RLNE ++ G+ E + + +RD MS EA +
Sbjct: 150 HQPLGGAQGQATDIEIQAREILYHKQRLNEYLAEHTGQPIERIAEDTERDFFMSPEEAKE 209
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 210 YGLIDQVIDR 219
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 101/200 (50%), Positives = 153/200 (76%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P+++I
Sbjct: 27 SLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIY 86
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G KG R +LP++RI+
Sbjct: 87 IYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGTKGKRASLPHSRIM 146
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ SDI A++I KI+R L EI + GK ++V + +RD M+A EA
Sbjct: 147 IHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMNAQEAL 206
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
++G++D++ R +++ +
Sbjct: 207 EYGIIDQIFEKRPKPDKEKE 226
>gi|87201067|ref|YP_498324.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium aromaticivorans DSM 12444]
gi|115311787|sp|Q2G3T3|CLPP_NOVAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|87136748|gb|ABD27490.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium aromaticivorans DSM 12444]
Length = 235
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 131/211 (62%), Positives = 174/211 (82%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F K ++ V L+P+VVEQ++RGERS+DIYSRLL+ERI+FVTG++EDHMA++I A
Sbjct: 12 TFGNQGKFTTDPVTGALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEVEDHMASVIIA 71
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ENP K+IS+YINSPGGVVTAG+AIYDTMQ+I+P +ST C+GQAASMGS LL+A
Sbjct: 72 QLLFLESENPSKDISMYINSPGGVVTAGLAIYDTMQYIRPRVSTVCIGQAASMGSFLLAA 131
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
GE GMR ALPNARI++HQPSGG G ASDIE A++I++I++R+N++YVK G++ +E+E
Sbjct: 132 GEPGMRIALPNARIMIHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKFTGRSLDEIE 191
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
K +DRD + A EA +G+VDKV SR +
Sbjct: 192 KAMDRDTFLEAEEAMKFGLVDKVFESRPATD 222
>gi|46579746|ref|YP_010554.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120602778|ref|YP_967178.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris DP4]
gi|60389677|sp|Q72CE8|CLPP_DESVH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201819|sp|A1VE85|CLPP_DESVV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|46449161|gb|AAS95813.1| ATP-dependent Clp protease, proteolytic subunit [Desulfovibrio
vulgaris str. Hildenborough]
gi|120563007|gb|ABM28751.1| ATP-dependent Clp protease proteolytic subunit ClpP [Desulfovibrio
vulgaris DP4]
gi|311233536|gb|ADP86390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris RCH1]
Length = 201
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 115/196 (58%), Positives = 156/196 (79%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP+V+E T R ER+YDIYSRLLK+RIV + I+D +A+LICAQLLFLE+ENP+KEI +Y
Sbjct: 3 VPIVIESTGRAERAYDIYSRLLKDRIVLLGTPIDDQVASLICAQLLFLESENPEKEIHMY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDTMQ+I P+ST CMGQAASMG+LLL+AG G+RF+LP++RI++H
Sbjct: 63 INSPGGSVTAGMAIYDTMQYINSPVSTLCMGQAASMGALLLAAGAPGLRFSLPHSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGGF GQA+DI+ A++++++K+ LN I ++ GK E+V +RD+ M EA +
Sbjct: 123 QPSGGFQGQATDIDIQAREVLRLKQSLNAIMSQHTGKPLEQVALDTERDYFMGPEEAQAY 182
Query: 199 GVVDKVLMSRIDIEEK 214
G++D+VL SR + +
Sbjct: 183 GLIDRVLTSRSEATDT 198
>gi|313683647|ref|YP_004061385.1| ATP-dependent clp protease proteolytic subunit clpp [Sulfuricurvum
kujiense DSM 16994]
gi|313156507|gb|ADR35185.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfuricurvum
kujiense DSM 16994]
Length = 198
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 113/198 (57%), Positives = 160/198 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T RGERSYDIYSRLLK+RI+ ++G++ D +A+ I AQLLFLEAE+P K+I
Sbjct: 1 MSYIPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEVNDPVASSIVAQLLFLEAEDPAKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGV+T+GMAI+DTM +I+P + T C+GQAASMG+ LLS+G KG R+ALP+ARI
Sbjct: 61 YFYINSPGGVITSGMAIFDTMNYIRPDVCTICIGQAASMGAFLLSSGTKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I+++K LNEI KNCG++ +++EK DRD+ MSA+EA
Sbjct: 121 MIHQPLGGAQGQATDIEIQAKEILRMKAELNEILAKNCGQSVKKLEKDTDRDNFMSAAEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
+G++D+VL+ + E+
Sbjct: 181 VTYGIIDEVLVQKEKEEK 198
>gi|256544468|ref|ZP_05471841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
gi|256399793|gb|EEU13397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
vaginalis ATCC 51170]
Length = 195
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 118/189 (62%), Positives = 157/189 (83%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQTNRGER+YDIYSRLLK+RI+F+TG +ED ++ +I AQLLFLE+++P K+I
Sbjct: 7 LVPTVIEQTNRGERAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTM +IKP +ST C+GQAASMG++LLS+G KG RF+LPN+ IL+
Sbjct: 67 YINSPGGVVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI+ A+ I+K+K+RLN+I N G++ E+++K DRD M A EA +
Sbjct: 127 HQPSGGAQGQASDIQIQAEQILKMKKRLNKILADNTGQSIEKIQKDTDRDFAMDAYEAKE 186
Query: 198 WGVVDKVLM 206
+G++DKV+
Sbjct: 187 YGLIDKVIE 195
>gi|119503321|ref|ZP_01625405.1| ATP-dependent Clp protease proteolytic subunit [marine gamma
proteobacterium HTCC2080]
gi|119460967|gb|EAW42058.1| ATP-dependent Clp protease proteolytic subunit [marine gamma
proteobacterium HTCC2080]
Length = 212
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 117/200 (58%), Positives = 156/200 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LGL+PMV+EQT+RGERS+DIYSRLLKER++F G +ED+MA LI AQLLFLE+ENP K+I
Sbjct: 13 LGLIPMVIEQTSRGERSFDIYSRLLKERVIFAVGPVEDNMANLIVAQLLFLESENPDKDI 72
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG++IYDTMQF+KP +ST C+GQAASMG+ LLS G G R+ LPNAR
Sbjct: 73 HLYINSPGGSVTAGLSIYDTMQFVKPDVSTMCLGQAASMGAFLLSGGASGKRYILPNART 132
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ A++I+ I+ RLN + ++ G+ E +E+ +RD M A ++
Sbjct: 133 MIHQPSGGAQGQATDIDIQAKEILIIRERLNRLMAEHTGQPLEVIERDTERDRFMDAEQS 192
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G+VD V+ +R + E S
Sbjct: 193 QSYGLVDHVVNNREVVAEDS 212
>gi|297808311|ref|XP_002872039.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
gi|297317876|gb|EFH48298.1| hypothetical protein ARALYDRAFT_910322 [Arabidopsis lyrata subsp.
lyrata]
Length = 237
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 149/193 (77%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERI+ + G I D + ++ AQLL+LE+ENP K I
Sbjct: 27 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIH 86
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ PIST C+GQAASM SLLL+AG KG R +LPNA ++
Sbjct: 87 MYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVM 146
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA DI H + IV++ LNE+YVK+ G+ + V +DRDH M+ EA
Sbjct: 147 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAK 206
Query: 197 DWGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 207 AFGIIDEVIDERP 219
>gi|15966977|ref|NP_387330.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti 1021]
gi|307302445|ref|ZP_07582202.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C]
gi|307316225|ref|ZP_07595669.1| Endopeptidase Clp [Sinorhizobium meliloti AK83]
gi|18202305|sp|P58277|CLPP1_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15076250|emb|CAC47803.1| Probable ATP-dependent CLP protease proteolytic subunit
[Sinorhizobium meliloti 1021]
gi|306898065|gb|EFN28807.1| Endopeptidase Clp [Sinorhizobium meliloti AK83]
gi|306903115|gb|EFN33705.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C]
Length = 205
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 118/198 (59%), Positives = 157/198 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAE+P
Sbjct: 1 MREAMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAESP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I LYINSPGGVVT+G A+YDTM++I+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPIQLYINSPGGVVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEAGERTALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I + K R+ +Y ++CG+TYEE E+ +DRD M+
Sbjct: 121 NASILVHQPSGGFQGQASDMLIHAEEIRRTKHRMTRLYAEHCGRTYEEFERAMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +WG++D+++ R
Sbjct: 181 AEEALEWGLIDRIITERE 198
>gi|224094113|ref|XP_002310077.1| predicted protein [Populus trichocarpa]
gi|222852980|gb|EEE90527.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 233 bits (595), Expect = 1e-59, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 151/193 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERIV + G I+D + ++ AQLLFLE+ENP K I
Sbjct: 34 SLIPMVIEHSSRGERAYDIFSRLLKERIVCINGPIDDDTSHVVVAQLLFLESENPSKPIH 93
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG KG R ALPNA I+
Sbjct: 94 MYLNSPGGQVTAGLAIYDTMQYIRSPVTTICLGQAASMASLLLAAGAKGERKALPNATIM 153
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA D+ H + IV++ LN++Y K+ G+ + ++K +DRD+ M+ EA
Sbjct: 154 IHQPSGGYSGQAKDMTIHTKQIVRVWDALNQLYCKHTGQPLDVIQKNMDRDYFMTPEEAK 213
Query: 197 DWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 214 EFGIIDDVIDQRP 226
>gi|254525030|ref|ZP_05137085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas sp. SKA14]
gi|219722621|gb|EED41146.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Stenotrophomonas sp. SKA14]
Length = 196
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 119/190 (62%), Positives = 161/190 (84%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA ++ AQLLFLE+ENP+K+I++YIN
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVVVAQLLFLESENPEKDINIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL+AGE G R+ALPN+R+++HQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPNVSTTCIGQAASMGALLLAAGEAGKRYALPNSRVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG+ GQA+DI+ HA++I+ ++ RLNE+ K+ G++ E + + +RD+ SA EA +G+
Sbjct: 121 LGGYQGQATDIDIHAREILTLRSRLNEVLAKHTGQSLETIARDTERDNFKSAFEAQAYGL 180
Query: 201 VDKVLMSRID 210
VD+VL R D
Sbjct: 181 VDQVLERRPD 190
>gi|226953943|ref|ZP_03824407.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
ATCC 27244]
gi|294651552|ref|ZP_06728861.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
haemolyticus ATCC 19194]
gi|226835297|gb|EEH67680.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
ATCC 27244]
gi|292822575|gb|EFF81469.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
haemolyticus ATCC 19194]
Length = 201
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 160/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DI+SRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP+K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIFSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPEKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQAA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDQVLSKRP 201
>gi|299536206|ref|ZP_07049519.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZC1]
gi|298728192|gb|EFI68754.1| ATP-dependent Clp protease proteolytic subunit [Lysinibacillus
fusiformis ZC1]
Length = 196
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 107/197 (54%), Positives = 149/197 (75%), Gaps = 1/197 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL+AE+P K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLQAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ IKP + T C+G AASMG+ LL+AGE G RFALPNA +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMQIIKPQVQTICIGMAASMGAFLLAAGEPGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ E + + DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNGILSERTGQPLEVIARDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D ++ R D +
Sbjct: 181 KEYGLIDHIM-HRSDNK 196
>gi|262280902|ref|ZP_06058685.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
calcoaceticus RUH2202]
gi|299771640|ref|YP_003733666.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
DR1]
gi|262257802|gb|EEY76537.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
calcoaceticus RUH2202]
gi|298701728|gb|ADI92293.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
DR1]
Length = 201
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQSA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDQVLSKRP 201
>gi|282850557|ref|ZP_06259936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294792182|ref|ZP_06757330.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
gi|294794047|ref|ZP_06759184.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|282580050|gb|EFB85454.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula ATCC 17745]
gi|294455617|gb|EFG23989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 3_1_44]
gi|294457412|gb|EFG25774.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
sp. 6_1_27]
Length = 197
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ RGERSYDIYSRLLK+RI+F+ G I+D++A + AQ+LFLEAE+P K+I L
Sbjct: 2 YVPIVVEQGERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASMG++LL+AG KG R+ALP+ARI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQAS+IE HA++I++++ LN I G+ E V + DRD+ MSA +A +
Sbjct: 122 HQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVE 181
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D+VL R +E K
Sbjct: 182 YGLIDEVLT-REPVESK 197
>gi|284053359|ref|ZP_06383569.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|291567407|dbj|BAI89679.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 200
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 146/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RIVF+ Q+ +A LI AQLLFL+AE+P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R++LP++RI++
Sbjct: 61 YINSPGGGVNAGLGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +KR+LNE K+ + +E+ +RD MSA +A +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYLKRQLNENLAKHTSQPLSRIEEDTERDFFMSAEDAVN 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVISRRP 192
>gi|182414555|ref|YP_001819621.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177841769|gb|ACB76021.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 206
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 152/199 (76%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+V+E T RGERS DIYSRLLK+RI+F+ I+D +A L+ AQ+ FL+ E+P+K+
Sbjct: 1 MSYYVPIVLENTGRGERSMDIYSRLLKDRIIFIGSPIDDTVANLVIAQMFFLQMEDPKKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT GMAIYDTM F++ I T+C+G AASM ++LLSAG KG RFALPN+R
Sbjct: 61 IQLYINSPGGVVTGGMAIYDTMNFLQCDIVTYCVGMAASMSTVLLSAGTKGKRFALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQPSGG GQA+DI A++I++ ++ LNE+ K+ GKT E+VEK DRD+ MSA E
Sbjct: 121 VMIHQPSGGAGGQAADIAIAAKEILRWRKTLNEVIAKHTGKTPEQVEKDSDRDYYMSAQE 180
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A D+G+VD V+ S + +
Sbjct: 181 AKDYGIVDHVVESTREAQS 199
>gi|218461999|ref|ZP_03502090.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli Kim
5]
Length = 203
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 120/202 (59%), Positives = 161/202 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I+LYINSPGGVVT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 HKPINLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGGRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A EA +WG++D++L R D
Sbjct: 181 AEEALEWGLIDRILKVREDTSS 202
>gi|322378952|ref|ZP_08053366.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS1]
gi|322379806|ref|ZP_08054103.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS5]
gi|321147774|gb|EFX42377.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS5]
gi|321148628|gb|EFX43114.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter suis
HS1]
Length = 197
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 110/192 (57%), Positives = 152/192 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MNYIPYVIEKTGRGERSYDIYSRLLKDRIVLLSGEINDAVASTIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VT+G++IYDTM +I P I T C+GQAASMG+ LLS G KG RF+LP+ARI
Sbjct: 61 NLYINSPGGSVTSGLSIYDTMNYIHPDICTICIGQAASMGAFLLSCGTKGKRFSLPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++I + ++I+++K LN+I +N G+T E++E+ DRD MSA +A
Sbjct: 121 MIHQPLGGTEGQATNIAIYTKEILRLKNTLNQIMAENTGQTLEKIEQDSDRDFFMSAEDA 180
Query: 196 CDWGVVDKVLMS 207
++G+VD VL
Sbjct: 181 KEYGLVDAVLSK 192
>gi|227872170|ref|ZP_03990538.1| endopeptidase Clp [Oribacterium sinus F0268]
gi|227841983|gb|EEJ52245.1| endopeptidase Clp [Oribacterium sinus F0268]
Length = 208
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 108/208 (51%), Positives = 151/208 (72%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K S + +P V++ T+RGERSYDI+SRLL ERIVF+ ++ A+L+ AQLLFL
Sbjct: 1 MKNFSYPQNITTIPYVIQSTSRGERSYDIFSRLLNERIVFLGDEVNSDTASLVIAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K+ISLYINSPGG VTAGM IYDTMQ+IK +ST C+G AASMG+ LL+ G KG
Sbjct: 61 ESEDPDKDISLYINSPGGSVTAGMGIYDTMQYIKCDVSTICVGMAASMGAFLLAGGAKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPNA +++HQPSGG GQA++I+ A+ I++ K+ L +I +NC + +E+V +R
Sbjct: 121 RMILPNAEVMIHQPSGGAQGQATEIQITAEWILRTKKNLAKILAENCNQPFEKVMADTER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEK 214
D+ MSA +A ++G+VD + R D+E+K
Sbjct: 181 DYWMSAEQALEYGLVDHIFQKRTDLEKK 208
>gi|269798318|ref|YP_003312218.1| ATP-dependent Clp protease proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
gi|269094947|gb|ACZ24938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
parvula DSM 2008]
Length = 197
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ RGERSYDIYSRLLK+RI+F+ G I+D++A + AQ+LFLEAE+P K+I L
Sbjct: 2 YVPIVVEQGERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASMG++LL+AG KG R+ALP+ARI++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGTKGKRYALPHARIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQAS+IE HA++I++++ LN I G+ E V + DRD+ MSA +A +
Sbjct: 122 HQPLGGVQGQASEIEIHAREILRMREELNGILASRSGQDIEVVARDTDRDNFMSAQDAVE 181
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D+VL R +E K
Sbjct: 182 YGLIDEVLT-RESVESK 197
>gi|331003803|ref|ZP_08327295.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
gi|330411995|gb|EGG91392.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
oral taxon 107 str. F0167]
Length = 193
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T+RGER++DIYSRLLK+RI+F+ ++ D A+L+ AQ+LFLE+E+P K+I
Sbjct: 1 MSLVPTVIESTSRGERAFDIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG V AGMAIYDTMQ++K +ST CMG AASMG+ LL+ G KG R+ALPNA I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGTKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++I A+ I+K K ++N+I +N + E +E+ +RD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTKEKMNKILAENTNRPIEVIERDTERDNYMSAKEA 180
Query: 196 CDWGVVDKVLMS 207
D+G++DKV+
Sbjct: 181 LDYGIIDKVIEH 192
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 147/190 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQ+ RGER++DIYSRLL+ERIVF+ Q++ +A LI AQLLFL++E+P+K+I +
Sbjct: 1 MIPIVIEQSGRGERAFDIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIFDTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ KR+LNE ++ G+ ++ + + +RD MS EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQEARE 180
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 181 YGLIDQVIDR 190
>gi|256827324|ref|YP_003151283.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cryptobacterium curtum DSM 15641]
gi|256583467|gb|ACU94601.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cryptobacterium curtum DSM 15641]
Length = 207
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 106/207 (51%), Positives = 149/207 (71%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ L+P V+EQ+ RGERS+DIYSRLL ERIVF+ I+D++A + AQLL LE
Sbjct: 1 MNEFTHPSSALIPYVIEQSPRGERSFDIYSRLLNERIVFLGEAIDDNVANSVVAQLLHLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ +P+K+ISLYINSPGG VTAG+AI DTM +I +ST C+GQ ASM ++LLS G KG R
Sbjct: 61 STDPEKDISLYINSPGGSVTAGLAILDTMDYISCDVSTICIGQCASMAAVLLSNGTKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPN R+++HQPSGG GQ ++I A++I+ I+ RLN I KN G++ E +++ +RD
Sbjct: 121 YALPNGRVMIHQPSGGAQGQQTEIAIVAKEILYIRDRLNGILAKNTGQSLETIQQDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ MSA A ++G+VD+V+ SR +E
Sbjct: 181 NFMSAEAAREYGLVDQVVTSRAAQKED 207
>gi|189500958|ref|YP_001960428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
gi|189496399|gb|ACE04947.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
phaeobacteroides BS1]
Length = 228
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 98/204 (48%), Positives = 152/204 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I+DH+A+L+ AQLLFLE+E+P
Sbjct: 22 QGITNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDDHVASLLMAQLLFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++++ LYINSPGG V+AG+ +YDT+Q+I+ +ST C+G AASMG+ LL+ G G R +LP
Sbjct: 82 ERDVFLYINSPGGSVSAGLGVYDTIQYIRSEVSTVCVGMAASMGAFLLACGANGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI++ L EI +CG+ E++ + +RD M+
Sbjct: 142 HSRIMIHQPSGGVQGQETDILIQAREIEKIRKLLEEIMASHCGQDVEKIREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA +G++D++ R E++
Sbjct: 202 AEEAKAYGIIDQIFSKRPASEKEK 225
>gi|154148860|ref|YP_001405639.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
hominis ATCC BAA-381]
gi|166201810|sp|A7HZE8|CLPP_CAMHC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|153804869|gb|ABS51876.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
hominis ATCC BAA-381]
Length = 195
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 117/189 (61%), Positives = 151/189 (79%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E+T+RGERSYDIYSRLLK+RIV ++G+I D +A+ + AQLLFLEAE+P K+I LY
Sbjct: 3 VPYVIERTSRGERSYDIYSRLLKDRIVMLSGEINDEVASSVVAQLLFLEAEDPDKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGVVT+G +IYDTM +IKP +ST C+GQAASMG+ LLS GEKG R+ALPNARI++H
Sbjct: 63 INSPGGVVTSGFSIYDTMNYIKPAVSTICIGQAASMGAFLLSCGEKGKRYALPNARIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE ++I++IK LN+I +N G+ ++EK DRD MSA EA +
Sbjct: 123 QPLGGAQGQATDIEITTKEILRIKATLNKILAENSGQKLSKIEKDTDRDFYMSAQEAVKY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|301154977|emb|CBW14440.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Haemophilus parainfluenzae T3T1]
Length = 188
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 123/188 (65%), Positives = 155/188 (82%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGERSYDIYSRLLKER++F++G++ED MA LI AQLLFLE+E+P+K+I++YIN
Sbjct: 1 MVVEQTSRGERSYDIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPKKDINIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALPNAR+++HQP
Sbjct: 61 SPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E +EK DRD+ MSA EA +G+
Sbjct: 121 LGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIERIEKDTDRDNFMSAEEAKAYGL 180
Query: 201 VDKVLMSR 208
VD VL+ R
Sbjct: 181 VDDVLIKR 188
>gi|58038575|ref|YP_190539.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
gi|67460438|sp|Q5FUR3|CLPP1_GLUOX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|58000989|gb|AAW59883.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
Length = 215
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 127/202 (62%), Positives = 170/202 (84%), Gaps = 1/202 (0%)
Query: 9 KDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D +VF LVPMVVEQT RGERS+DI+SRLL+ERI+F+TG + D +++LICAQLL+LE
Sbjct: 6 RDPLEVFSNSLVPMVVEQTARGERSFDIFSRLLQERIIFLTGPVYDQVSSLICAQLLYLE 65
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+ GEKG R
Sbjct: 66 SVNPTKEISFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKGHR 125
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPNAR+++HQPSGG GQASDIE A++I+ I++RLNEIY ++ G+T E++E+ L+RD
Sbjct: 126 YALPNARVMVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIEQKLERD 185
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SA+EA ++G++DKV+
Sbjct: 186 SYLSANEAREFGLIDKVVERNP 207
>gi|169634426|ref|YP_001708162.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii SDF]
gi|169797267|ref|YP_001715060.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii AYE]
gi|184156807|ref|YP_001845146.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii ACICU]
gi|213155939|ref|YP_002317984.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii AB0057]
gi|215484708|ref|YP_002326943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii AB307-0294]
gi|239500790|ref|ZP_04660100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii AB900]
gi|260549098|ref|ZP_05823319.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
RUH2624]
gi|260556149|ref|ZP_05828368.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii ATCC 19606]
gi|294836355|ref|ZP_06781038.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
6013113]
gi|294841889|ref|ZP_06786572.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
6014059]
gi|294857705|ref|ZP_06795474.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
6013150]
gi|301346762|ref|ZP_07227503.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii AB056]
gi|301512252|ref|ZP_07237489.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii AB058]
gi|301594241|ref|ZP_07239249.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii AB059]
gi|169150194|emb|CAM88088.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Acinetobacter baumannii AYE]
gi|169153218|emb|CAP02314.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
(Caseinolytic protease) (Protease Ti) (Heat shock
protein F21.5) [Acinetobacter baumannii]
gi|183208401|gb|ACC55799.1| Protease subunit of ATP-dependent Clp protease [Acinetobacter
baumannii ACICU]
gi|193076289|gb|ABO10931.2| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055099|gb|ACJ40001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii AB0057]
gi|213988734|gb|ACJ59033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii AB307-0294]
gi|260407826|gb|EEX01298.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter sp.
RUH2624]
gi|260410204|gb|EEX03503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
baumannii ATCC 19606]
gi|322506699|gb|ADX02153.1| clpP [Acinetobacter baumannii 1656-2]
gi|323516573|gb|ADX90954.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii TCDC-AB0715]
Length = 201
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 122/194 (62%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ Y+ + + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYDTIARDTDRDNFMTAQAA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDQVLSKRP 201
>gi|328952152|ref|YP_004369486.1| ATP-dependent Clp protease proteolytic subunit [Desulfobacca
acetoxidans DSM 11109]
gi|328452476|gb|AEB08305.1| ATP-dependent Clp protease proteolytic subunit [Desulfobacca
acetoxidans DSM 11109]
Length = 199
Score = 233 bits (594), Expect = 1e-59, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 154/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQ++RGER+YDIYSRLL++RI+F+ I D ++ LI AQLLFLE+E+P K+I
Sbjct: 1 MPLIPIVVEQSSRGERAYDIYSRLLRDRIIFLGSAINDEVSNLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG+VTAG+AIYDTMQ+IKPP+ST CMG ASM +LLL+AG KG RFALP+ARI
Sbjct: 61 HFYINSPGGLVTAGLAIYDTMQYIKPPVSTLCMGLGASMAALLLAAGAKGKRFALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQA+D+E A++I++++ LNE+ ++ G+ E + +RD MS +A
Sbjct: 121 LIHQPLGGFQGQATDVEIQAREILRLREELNEVLARHTGQPRERINTDTERDFYMSGDQA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD+V+ +R
Sbjct: 181 KEYGLVDEVITTR 193
>gi|295396804|ref|ZP_06806937.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans
ATCC 11563]
gi|294974956|gb|EFG50650.1| ATP-dependent Clp protease proteolytic subunit [Aerococcus viridans
ATCC 11563]
Length = 198
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/198 (52%), Positives = 150/198 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G+ D +A I AQLLFL+A++P K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGEFNDDLANSIIAQLLFLDAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTMQF+ + T MG AASMGS + +AG KG RFALPNA I
Sbjct: 61 YLYINSPGGSITSGMAIYDTMQFVHADVQTIVMGMAASMGSFIAAAGTKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQA++IE A+ I+K K ++N +Y + G+ E +E+ DRD+ ++A EA
Sbjct: 121 LIHQPLGGAQGQATEIEIAARHILKTKEKMNRLYSEMTGQPVEVIERDTDRDNWLTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G++D+++ ++E+
Sbjct: 181 LEYGLLDQIMTKNDELEK 198
>gi|226310010|ref|YP_002769904.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226092958|dbj|BAH41400.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 233 bits (594), Expect = 2e-59, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 146/192 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQT+ GERSYDIYSRLLK+RI+F+ I+D +A + AQLLFL AE+P+K+I
Sbjct: 1 MNLIPVVVEQTSYGERSYDIYSRLLKDRIIFLGSAIDDQVANAVVAQLLFLAAEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAI DTM+F+ P +ST C G AASMG++LL AG G R+ALPNA +
Sbjct: 61 HLYINSPGGSVTAGMAIIDTMKFVAPDVSTICTGMAASMGAMLLVAGAPGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQP GG GQASDI+ A I++ + L I + GKT E++EK DRD+ ++A+EA
Sbjct: 121 MLHQPWGGSQGQASDIKIAADRIMRHRHMLYTIISERTGKTVEQIEKDADRDYFLTAAEA 180
Query: 196 CDWGVVDKVLMS 207
++G++DKV+
Sbjct: 181 LEYGLIDKVIEK 192
>gi|261837975|gb|ACX97741.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
51]
Length = 196
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 113/196 (57%), Positives = 155/196 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+
Sbjct: 1 MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++R
Sbjct: 61 IGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKE 180
Query: 195 ACDWGVVDKVLMSRID 210
A ++G++DKVL +
Sbjct: 181 AKEYGLIDKVLEKNVK 196
>gi|254410742|ref|ZP_05024520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcoleus
chthonoplastes PCC 7420]
gi|196182097|gb|EDX77083.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcoleus
chthonoplastes PCC 7420]
Length = 202
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 146/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL+ERIVF+ Q++ +A LI AQLLFLEA++P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRERIVFLGQQVDSDLANLIVAQLLFLEADDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM IYDTM I+P + T C+G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIYDTMNQIRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+ K+RLN++ ++ + + + + +RD MSA EA D
Sbjct: 121 HQPLGGAQGQASDIEIQAKEILYHKQRLNQLLAEHTDQPLDRIAEDTERDFFMSAEEAKD 180
Query: 198 WGVVDKVLMSRI 209
+ ++D+V+ R
Sbjct: 181 YRLIDQVINRRP 192
>gi|88658316|ref|YP_507695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ehrlichia
chaffeensis str. Arkansas]
gi|115311357|sp|Q2GFT8|CLPP_EHRCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88599773|gb|ABD45242.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ehrlichia
chaffeensis str. Arkansas]
Length = 199
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 135/196 (68%), Positives = 171/196 (87%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG IED MA+LI AQL+FLE+ENP+KEI
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLIVAQLIFLESENPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMGSLLL+AGE GMR+ALPN+RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYIKPKVSTLCLGQAASMGSLLLAAGEPGMRYALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I+ IK RLN+IYVK+ G+ EV ++RD+ M A +A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILDIKGRLNDIYVKHTGRDLSEVVANMERDNFMRAEKA 180
Query: 196 CDWGVVDKVLMSRIDI 211
D+G++DKV+ R+DI
Sbjct: 181 KDFGIIDKVIEKRLDI 196
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 202
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 141/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ ++ D + LI AQLLFLEAE+P K+I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN + + +++ + +RD MSA EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLASHTEQPLDKIAEDTERDFFMSAEEAQE 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVINRRP 192
>gi|157737934|ref|YP_001490618.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
RM4018]
gi|315637681|ref|ZP_07892886.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
gi|167008646|sp|A8EVH5|CLPP_ARCB4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157699788|gb|ABV67948.1| ATP-dependent Clp protease, proteolytic subunit [Arcobacter
butzleri RM4018]
gi|315478028|gb|EFU68756.1| ATP-dependent Clp protease proteolytic subunit [Arcobacter butzleri
JV22]
Length = 194
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVE+T RGERSYDIYSRLLK+RI+ ++G+I D +A+ + AQLLFLEAE+P K+I
Sbjct: 1 MSYIPYVVEKTGRGERSYDIYSRLLKDRIIMLSGEINDAVASTVVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GM+I+DTM +IKP + T C+GQAASMG+ LLS+G KG R++LPN+RI
Sbjct: 61 YLYINSPGGVVTSGMSIFDTMNYIKPDVCTICIGQAASMGAFLLSSGAKGKRYSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A++I ++K LN I G+ + +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAKEIQRLKDTLNGILASQTGQDFATIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
C +G++D+V+
Sbjct: 181 CSYGLIDEVITK 192
>gi|282900541|ref|ZP_06308485.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194594|gb|EFA69547.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 237
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 143/192 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D++A I AQLLFL+AE+P+K++
Sbjct: 32 SSIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDV 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG G R +LP++RI
Sbjct: 92 QLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRI 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A++I+ IK LN++ K+ G+ E +E +RD MS EA
Sbjct: 152 MIHQPLGGAQGQAIDIEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEA 211
Query: 196 CDWGVVDKVLMS 207
D+G++D+V+
Sbjct: 212 KDYGLIDQVISR 223
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
tusciae DSM 2912]
Length = 192
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 107/190 (56%), Positives = 146/190 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQT+RGERSYDIYSRLLK+RI+F+ I+D +A + AQLLFL AE+P+K++
Sbjct: 1 MYFVPIVVEQTSRGERSYDIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDV 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAI DTMQ+I+P ++T C+G AASM ++LL+AG KG R ALPN+ I
Sbjct: 61 SLYINSPGGSVTAGMAILDTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DI+ HA I++++ +LN I + G+ +E+ DRD MSA EA
Sbjct: 121 MIHQPLGGVQGQAVDIKIHADRILRVREKLNRILSERTGQPLSRIEEDTDRDRFMSADEA 180
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 181 KEYGLIDDVI 190
>gi|218885218|ref|YP_002434539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
vulgaris str. 'Miyazaki F']
gi|226706450|sp|B8DNL4|CLPP_DESVM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|218756172|gb|ACL07071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
vulgaris str. 'Miyazaki F']
Length = 201
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 155/192 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP+V+E + R ER+YDIYSRLLK+RI+ + I+D +A+LICAQLLFLE+ENP+KEI LY
Sbjct: 3 VPIVIETSGRSERAYDIYSRLLKDRIILLGTPIDDQVASLICAQLLFLESENPEKEIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDTMQ+I P++T C+GQAASMG+LLL+AG GMR ALPN+RI++H
Sbjct: 63 INSPGGSVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGAPGMRHALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGGF GQASDI+ HA++++++K LNEI ++ G+ E V +RD+ M +EA ++
Sbjct: 123 QPSGGFHGQASDIDIHAREVLRMKANLNEIMARHTGQPVERVADDTERDYFMGPAEAKEY 182
Query: 199 GVVDKVLMSRID 210
G++D +L SR D
Sbjct: 183 GIIDSILTSRRD 194
>gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|115311352|sp|Q317Y6|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 219
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 105/198 (53%), Positives = 147/198 (74%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+S +G VP V+EQ+ RGER++DIYSRLL+ERI+F+ I D ++ + AQLLFLEAE
Sbjct: 22 ESIHKTIGAVPTVIEQSGRGERAFDIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAE 81
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P+K+I +YINSPGG VTAGMAIYDTMQ I P + T C G AASMG+ LLS G KG R A
Sbjct: 82 DPEKDIQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLA 141
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQP GG GQA +IE A++I+ +K+ LN + ++ G+ E++ + +RD+
Sbjct: 142 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYF 201
Query: 190 MSASEACDWGVVDKVLMS 207
+S SEA ++G++DKV+
Sbjct: 202 LSPSEAVEYGLIDKVIKK 219
>gi|145298871|ref|YP_001141712.1| ATP-dependent Clp protease proteolytic subunit [Aeromonas
salmonicida subsp. salmonicida A449]
gi|226706437|sp|A4SM42|CLPP_AERS4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|142851643|gb|ABO89964.1| ATP-dependent Clp protease, proteolytic subunit [Aeromonas
salmonicida subsp. salmonicida A449]
Length = 207
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 125/197 (63%), Positives = 156/197 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E L+PMVVEQT +GERSYDIYSRLLKER++F+TGQ+EDHMA L+ AQLLFLE+ENP
Sbjct: 10 ESPRNALIPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDHMANLVVAQLLFLESENP 69
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++IS+YINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G KG RF LP
Sbjct: 70 DQDISIYINSPGGAVTAGMSIYDTMQFIKPDVSTVCMGQACSMGAFLLAGGAKGKRFCLP 129
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+AR+++HQP GGF GQASDI+ HAQ+I+KIK LNE + G+ +E+ DRD+ MS
Sbjct: 130 SARVMIHQPLGGFQGQASDIQIHAQEILKIKNTLNERLAFHTGQEMATIERDTDRDNFMS 189
Query: 192 ASEACDWGVVDKVLMSR 208
A +A +G+VD +L R
Sbjct: 190 ADQAVAYGLVDGILSQR 206
>gi|91076194|ref|XP_971998.1| PREDICTED: similar to caseinolytic protease, ATP-dependent,
proteolytic subunit homolog [Tribolium castaneum]
gi|270014730|gb|EFA11178.1| hypothetical protein TcasGA2_TC004785 [Tribolium castaneum]
Length = 234
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 117/200 (58%), Positives = 159/200 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVP+V+EQT RGERSYDIYSRLLKERI+ + G I D M++LI AQLLFL++E+ K I
Sbjct: 23 GLVPIVIEQTGRGERSYDIYSRLLKERIICLMGPINDPMSSLIVAQLLFLQSESTNKPIH 82
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+ IYDTMQ+I PPI+T+C+GQAASM SLLL+AG GMR +LP+ARI+
Sbjct: 83 MYINSPGGSVTAGLGIYDTMQYILPPIATWCVGQAASMASLLLAAGSPGMRHSLPHARIM 142
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI+ A++I+K+K ++N +YVK+ G E++E++++RD MS EA
Sbjct: 143 IHQPSGGAQGQATDIKIQAEEILKLKSQINNLYVKHTGLALEKIERSMERDMFMSPVEAQ 202
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
+G++DK+L S + S+
Sbjct: 203 SFGIIDKILTSPPKNKAGSE 222
>gi|160897495|ref|YP_001563077.1| ATP-dependent Clp protease proteolytic subunit [Delftia acidovorans
SPH-1]
gi|160363079|gb|ABX34692.1| Endopeptidase Clp [Delftia acidovorans SPH-1]
Length = 201
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 155/197 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQ+ RGERS+DIYSRLL++R++F+ G++ D ++ L+CAQLLFLEAENP K I
Sbjct: 5 MMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE G R ALPNA +
Sbjct: 65 HLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQASDI HA+++++ K R+ +Y ++CG++YEEVE+ LDRD M+A EA
Sbjct: 125 HVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDRFMTAEEA 184
Query: 196 CDWGVVDKVLMSRIDIE 212
+WG++DKVL R
Sbjct: 185 REWGLIDKVLDRRTATP 201
>gi|320120411|gb|EFE27574.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Filifactor
alocis ATCC 35896]
gi|320120478|gb|ADW16163.1| hypothetical protein HMPREF0389_01718 [Filifactor alocis ATCC
35896]
Length = 196
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 105/192 (54%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQ+ RGERSYDIYSRLLK+RI+F++ ++ D ++L+ AQ+LFLEAE+P K+I
Sbjct: 3 MAYVPVVVEQSGRGERSYDIYSRLLKDRIIFLSDEVNDVTSSLVVAQMLFLEAEDPDKDI 62
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +T+GMAI+DTMQ+IK + T C+G AASMG+ LL+AGEKG R+ALPNA +
Sbjct: 63 MFYINSPGGSITSGMAIFDTMQYIKCDVCTICIGMAASMGAFLLAAGEKGKRYALPNAEV 122
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A+ I+K+K +LN I + G+ E ++ +RD+ MSA EA
Sbjct: 123 MIHQPLGGAQGQATDIQIQAERILKMKDKLNIILAERTGQNLETIKNDTERDNFMSAEEA 182
Query: 196 CDWGVVDKVLMS 207
++G++DKV+
Sbjct: 183 KEYGLIDKVIEK 194
>gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 229
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 106/206 (51%), Positives = 147/206 (71%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S + + +VPMVVEQ+ GER++DIYSRLL+ERIVF+ ++D +A I A
Sbjct: 10 SIYNQRSSEIYSMSQNVVPMVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVA 69
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFL+AE+P+K+I LYINSPGG V AG+AIYDTMQ I+P ++T C G AASMG+ LL
Sbjct: 70 QLLFLDAEDPEKDIQLYINSPGGSVYAGLAIYDTMQQIRPDVATICFGLAASMGAFLLCG 129
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G G R ALP++RI++HQP GG GQA +IE A++I+ IKRRLNE+ + G+ ++ +
Sbjct: 130 GAPGKRMALPSSRIMIHQPLGGAQGQAVEIEIQAKEILYIKRRLNEMLASHTGQPFDTIA 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMS 207
+ +RD MSA EA ++G++DKV+
Sbjct: 190 EDTERDFFMSAQEAKEYGLIDKVISR 215
>gi|329890026|ref|ZP_08268369.1| clp protease family protein [Brevundimonas diminuta ATCC 11568]
gi|328845327|gb|EGF94891.1| clp protease family protein [Brevundimonas diminuta ATCC 11568]
Length = 213
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 139/208 (66%), Positives = 170/208 (81%), Gaps = 1/208 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D LVPMVVEQ++RGERS+DI+SRLL+ERI+F+TG ED MA+LICAQLLFL
Sbjct: 1 MRDPIDYISNNLVPMVVEQSSRGERSFDIFSRLLRERIIFLTGPFEDGMASLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGG VT+ +AIYDTMQ+IK P+ST MG AAS GSL+L+AGE G
Sbjct: 61 ESENPKKEISMYINSPGGQVTSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGEAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNAR+++HQPSGGF G ASDIERHA+DI+ KRRLNEIYV++ G+TYEEVE+TLDR
Sbjct: 121 RIALPNARVMVHQPSGGFRGTASDIERHAEDIIATKRRLNEIYVQHTGRTYEEVERTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEK 214
DH M+A EA WG+VD V R ++
Sbjct: 181 DHFMTAEEAKAWGIVDHVYDKRTQADDD 208
>gi|241203529|ref|YP_002974625.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240857419|gb|ACS55086.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 203
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 120/202 (59%), Positives = 162/202 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGVVT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPINLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMMIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A EA +WG++D++L R D
Sbjct: 181 AEEALEWGLIDRILTVREDTAS 202
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 200
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 144/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RG+R++DIYSRLL+ERI+F+ + D +A + AQ+LFLEAE+P+K+I
Sbjct: 8 GVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEAEDPEKDIQ 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R +LPN+RI+
Sbjct: 68 LYINSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRVSLPNSRIM 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +IE A++I+ +K LN + ++ G+ +++ + DRDH +S EA
Sbjct: 128 IHQPLGGAQGQAVEIEIQAKEILFLKETLNGLLSEHTGQPIDKIAEDTDRDHFLSPQEAV 187
Query: 197 DWGVVDKVLMS 207
++G++DKV+ S
Sbjct: 188 EYGLIDKVINS 198
>gi|85707624|ref|ZP_01038690.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
gi|85689158|gb|EAQ29161.1| ATP-dependent Clp protease [Erythrobacter sp. NAP1]
Length = 235
Score = 232 bits (593), Expect = 2e-59, Method: Composition-based stats.
Identities = 131/206 (63%), Positives = 168/206 (81%), Gaps = 2/206 (0%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+G ++D LVP VVEQ++RGER++DI+SRLL+ERIVFVTGQ+ED MA+LI AQL
Sbjct: 15 QGQFERDPLTG--ALVPTVVEQSSRGERAFDIFSRLLRERIVFVTGQVEDTMASLIVAQL 72
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ENP K IS+YINSPGGVVTAGMAI+DTMQ+IKP +ST C+GQAASMGS LL+AGE
Sbjct: 73 LFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPRVSTVCIGQAASMGSFLLAAGE 132
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
GMR ALPNARI++HQPSGG G ASDIE A++I++I+ R+N++YVK G++ +E+EK
Sbjct: 133 PGMRVALPNARIMVHQPSGGARGMASDIEIQAREILRIRSRMNDLYVKYTGQSLDEIEKA 192
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD + A EA +G+VDKV +R
Sbjct: 193 MDRDTFLEAEEAMKFGLVDKVFETRP 218
>gi|226324366|ref|ZP_03799884.1| hypothetical protein COPCOM_02147 [Coprococcus comes ATCC 27758]
gi|225206814|gb|EEG89168.1| hypothetical protein COPCOM_02147 [Coprococcus comes ATCC 27758]
Length = 194
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 113/194 (58%), Positives = 150/194 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP VVEQT+RGERSYDIYSRLLK+RI+F+ ++ D A+LI AQLLFLEAE+P+K+
Sbjct: 1 MSSLVPYVVEQTSRGERSYDIYSRLLKDRIIFLDTEVNDASASLIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG ++AGM+IYDTM +IK +ST CMG AASMG+ LL+ G KG R+ALPNA
Sbjct: 61 IQFYINSPGGSISAGMSIYDTMNYIKCDVSTMCMGMAASMGAFLLAGGAKGKRYALPNAE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG GQA++IE +AQ I+KI+ R+N + N G++YE + +RD+ +A E
Sbjct: 121 IMIHQPSGGAQGQATEIEINAQHILKIRERMNRLMAANTGQSYETICADTERDNWKTAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G++DKV+ SR
Sbjct: 181 ALAYGLIDKVITSR 194
>gi|318043033|ref|ZP_07974989.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0101]
Length = 194
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 143/189 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VVEQ+ RGER++DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+K+I +
Sbjct: 1 MLPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQI 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++
Sbjct: 61 YVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA DIE A++I+ +K LN + ++ G+ E++ + DRD+ +S +EA
Sbjct: 121 HQPLGGAQGQAVDIEIQAKEILYLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVQ 180
Query: 198 WGVVDKVLM 206
+G++D+V+
Sbjct: 181 YGLIDRVVT 189
>gi|309320723|pdb|3P2L|A Chain A, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320724|pdb|3P2L|B Chain B, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320725|pdb|3P2L|C Chain C, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320726|pdb|3P2L|D Chain D, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320727|pdb|3P2L|E Chain E, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320728|pdb|3P2L|F Chain F, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
gi|309320729|pdb|3P2L|G Chain G, Crystal Structure Of Atp-Dependent Clp Protease Subunit P
From Francisella Tularensis
Length = 201
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 148/201 (73%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
LVP V+E+T GER++DIYSRLLKERIVF+ G++ DH A L+ AQLLFLE+E+P
Sbjct: 1 SNANNLVPTVIEKTAGGERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPD 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I YINSPGG VTAG +YDT QFIKP +ST C+G AAS GSLLL+ G KG R++LP+
Sbjct: 61 KDIYFYINSPGGXVTAGXGVYDTXQFIKPDVSTICIGLAASXGSLLLAGGAKGKRYSLPS 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++I +HQP GGF GQASDIE HA++I++IK RLN++ + G+ E + K DRD+ A
Sbjct: 121 SQIXIHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFXXA 180
Query: 193 SEACDWGVVDKVLMSRIDIEE 213
EA +G++D V+ SR I +
Sbjct: 181 DEAKAYGLIDHVIESREAIIK 201
>gi|303229413|ref|ZP_07316203.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
gi|303231336|ref|ZP_07318070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302513932|gb|EFL55940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-049-V-Sch6]
gi|302515949|gb|EFL57901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Veillonella
atypica ACS-134-V-Col7a]
Length = 197
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 156/197 (79%), Gaps = 1/197 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ RGERSYDIYSRLLK+RI+F+ G I+D++A + AQ+LFLEAE+P K+I L
Sbjct: 2 YVPIVVEQGERGERSYDIYSRLLKDRIIFLGGPIDDNVANAVIAQMLFLEAEDPDKDIHL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASMG++LL+AG KG RFALP+AR+++
Sbjct: 62 YINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMGAVLLTAGAKGKRFALPHARVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQAS+IE HA++I++++ LN I G+ E V + DRD+ MSA +A +
Sbjct: 122 HQPLGGVQGQASEIEIHAREILRMREELNGILAARSGQDIEVVARDTDRDNFMSAQDAVE 181
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D+VL R +E K
Sbjct: 182 YGLIDEVLT-RDTLESK 197
>gi|291463558|pdb|3KTG|A Chain A, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463559|pdb|3KTG|B Chain B, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463560|pdb|3KTG|C Chain C, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463561|pdb|3KTG|D Chain D, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463562|pdb|3KTG|E Chain E, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463563|pdb|3KTG|F Chain F, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463564|pdb|3KTG|G Chain G, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463565|pdb|3KTH|A Chain A, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463566|pdb|3KTH|B Chain B, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463567|pdb|3KTH|C Chain C, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463568|pdb|3KTH|D Chain D, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463569|pdb|3KTH|E Chain E, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463570|pdb|3KTH|F Chain F, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463571|pdb|3KTH|G Chain G, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
Length = 199
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 110/191 (57%), Positives = 151/191 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL AE+P+KEIS
Sbjct: 1 NLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ ++
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA++IE A+ I+ ++ +LN++ + G+ E +E+ DRD+ SA EA
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 180
Query: 197 DWGVVDKVLMS 207
++G++DK+L
Sbjct: 181 EYGLIDKILTH 191
>gi|194337396|ref|YP_002019190.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
gi|194309873|gb|ACF44573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelodictyon
phaeoclathratiforme BU-1]
Length = 225
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 102/204 (50%), Positives = 153/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 QGITNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +Y+NSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G KG R +LP
Sbjct: 82 ERDIYIYVNSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ SDI A++I KI+ L E+ K+ GK +++ + +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQESDIVIQAREIEKIRTLLEELLAKHTGKDVKQIREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA D+G++D + R E+K
Sbjct: 202 APEALDYGIIDAIFEKRPAPEKKD 225
>gi|90407420|ref|ZP_01215604.1| ATP-dependent Clp protease proteolytic subunit [Psychromonas sp.
CNPT3]
gi|90311451|gb|EAS39552.1| ATP-dependent Clp protease proteolytic subunit [Psychromonas sp.
CNPT3]
Length = 207
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 117/197 (59%), Positives = 155/197 (78%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L+PMVVEQT +GERSYDIYSRLLKER++F+TGQ+ED MA +I AQLLFLE+E+P+
Sbjct: 11 TISNTLIPMVVEQTAKGERSYDIYSRLLKERVIFLTGQVEDQMANVITAQLLFLESESPE 70
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+IS+YINSPGG ++AGMAIYDTMQFIKP +ST CMG AASMG+ LL++G G R LPN
Sbjct: 71 KDISIYINSPGGSISAGMAIYDTMQFIKPDVSTVCMGMAASMGAFLLASGAPGKRHCLPN 130
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
A++++HQP GGF GQASD E HA++I+ K+ +NE+ + G+ + V K DRD+ M A
Sbjct: 131 AKVMIHQPLGGFQGQASDFEIHAKEILATKKLMNELLAFHTGQDIDVVTKDTDRDNFMRA 190
Query: 193 SEACDWGVVDKVLMSRI 209
+EA ++G+VD +L R
Sbjct: 191 NEALEYGIVDSILTKRK 207
>gi|219885303|gb|ACL53026.1| unknown [Zea mays]
Length = 302
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+E T+RGER+YDI SRLLKERIV + G I D A+L+ AQLLFLE+ENP K +
Sbjct: 76 GLVPMVIETTSRGERAYDILSRLLKERIVCIHGPIADDTASLVVAQLLFLESENPLKPVH 135
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG G R ALPNAR++
Sbjct: 136 LYINSPGGVVTAGLAIYDTMQYIRCPVTTLCIGQAASMGSLLLAAGAPGERRALPNARVM 195
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K++ RLN+IY K+ + +++E+ ++RD M EA
Sbjct: 196 IHQPSGGAQGQATDIAIQAKEILKMRDRLNKIYQKHTRQPIDKIEQCMERDLFMDPEEAR 255
Query: 197 DWGVVDKVLMSRI 209
DWG++D+V+ +R
Sbjct: 256 DWGLIDEVIENRP 268
>gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 224
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 144/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RGER++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I
Sbjct: 24 GILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQ 83
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LL G KG R ALPNARI+
Sbjct: 84 IYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIM 143
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ ++ + DRDH +S ++A
Sbjct: 144 IHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAV 203
Query: 197 DWGVVDKVLMS 207
++G++D+V+ S
Sbjct: 204 EYGLIDRVVDS 214
>gi|209523050|ref|ZP_03271607.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|209496637|gb|EDZ96935.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
Length = 200
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 146/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RIVF+ Q+ +A LI AQLLFL+AE+P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRDRIVFLGTQVNSDVANLIVAQLLFLDAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R++LP++RI++
Sbjct: 61 YINSPGGGVNAGLGIFDTMNHIRPDVCTVCLGLAASMGAFLLSAGAKGKRYSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +KR+LNE K+ + +E+ +RD MSA +A +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYLKRQLNENLAKHTEQPLSRIEEDTERDFFMSAEDAVN 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDQVISRRP 192
>gi|257870013|ref|ZP_05649666.1| peptidase S14 [Enterococcus gallinarum EG2]
gi|257804177|gb|EEV32999.1| peptidase S14 [Enterococcus gallinarum EG2]
Length = 196
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 150/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++GQ+ D +A I AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AI+DTM FIK + T MG AASMGS LL+AGEKG RFALPNA I
Sbjct: 61 YLYINSPGGSVTAGLAIFDTMNFIKADVQTIVMGMAASMGSFLLTAGEKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + RLN+I + G+ E +EK DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILQTRERLNKILSERTGQPIEVIEKDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+++ S
Sbjct: 181 KDYGLIDEIMESNS 194
>gi|15596998|ref|NP_250492.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PAO1]
gi|116049751|ref|YP_791442.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218892245|ref|YP_002441112.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa LESB58]
gi|254234895|ref|ZP_04928218.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa C3719]
gi|254240194|ref|ZP_04933516.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa 2192]
gi|296389808|ref|ZP_06879283.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PAb1]
gi|18203012|sp|Q9I2U1|CLPP1_PSEAE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|9947784|gb|AAG05190.1|AE004606_4 ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PAO1]
gi|115584972|gb|ABJ10987.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|126166826|gb|EAZ52337.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa C3719]
gi|126193572|gb|EAZ57635.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa 2192]
gi|218772471|emb|CAW28253.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa LESB58]
Length = 213
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 122/193 (63%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKERI+F+ GQ+ED+MA L+ AQLLFLEAENP+K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPEKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ IK RLN+I + G+ + + + DRD MS EA
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIKERLNQILAHHTGQPLDVIARDTDRDRFMSGDEAV 197
Query: 197 DWGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 198 KYGLIDKVMTQRD 210
>gi|219872047|ref|YP_002476422.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
parasuis SH0165]
gi|254763791|sp|B8F822|CLPP_HAEPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219692251|gb|ACL33474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
parasuis SH0165]
Length = 193
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQ+++GER+YDIYSRLLKERI+F+ G +ED MA LI AQ+LFLEAE+P+K+I
Sbjct: 1 MAVIPMVVEQSSKGERAYDIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP +ST CMGQA SMG+ LLSAG KG RFALPN+R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSAGAKGKRFALPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DI+ HAQ+I+K+K L ++C + +E+V + +RD+ MSA EA
Sbjct: 121 MIHQPLGGYRGQATDIQIHAQEILKLKEMLTRKMAEHCSQPFEKVAQDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ R
Sbjct: 181 KAYGLIDDVVTKR 193
>gi|78186273|ref|YP_374316.1| peptidase S14, ClpP [Chlorobium luteolum DSM 273]
gi|115311788|sp|Q3B5V8|CLPP_PELLD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78166175|gb|ABB23273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
luteolum DSM 273]
Length = 225
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 105/204 (51%), Positives = 154/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 QGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +Y+NSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G KG R +LP
Sbjct: 82 ERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ SDI A++I KI+R L EI + GK ++V + +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEILASHTGKDVQQVREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA D+G++D+V R E+K
Sbjct: 202 AEEALDYGIIDQVFAKRPAPEKKD 225
>gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|67460519|sp|Q7V992|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 224
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 101/191 (52%), Positives = 144/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RGER++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I
Sbjct: 24 GILPTVVEQSGRGERAFDIYSRLLRERIIFLGTGVDDQVADALVAQMLFLEAEDPEKDIQ 83
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LL G KG R ALPNARI+
Sbjct: 84 IYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLCGGTKGKRLALPNARIM 143
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ ++ + DRDH +S ++A
Sbjct: 144 IHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNKIAEDTDRDHFLSPAKAV 203
Query: 197 DWGVVDKVLMS 207
++G++D+V+ S
Sbjct: 204 EYGLIDRVVDS 214
>gi|307204646|gb|EFN83268.1| Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Harpegnathos saltator]
Length = 237
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 159/198 (80%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ +L VP+VVEQ+ RGER+YDIYSRLLKERI+ + G I D++++++ AQLLFL++E
Sbjct: 19 KTSKRYLNFVPVVVEQSGRGERAYDIYSRLLKERIICLMGPITDNVSSVVIAQLLFLQSE 78
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + I +YINSPGG VTAG+ IYDTMQ++ PP++T+C+GQA SM SLLL+AG KGMR +
Sbjct: 79 SSKNPIHMYINSPGGSVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAKGMRHS 138
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI+ HQPSGG GQA+DI+ A +I+K+K+++NE+YVK+ G+ E++E +++RD+
Sbjct: 139 LPNARIMTHQPSGGVQGQATDIQIQALEILKLKKQINELYVKHTGQELEKIESSMERDNF 198
Query: 190 MSASEACDWGVVDKVLMS 207
MS +A ++G++DKVL
Sbjct: 199 MSPIQAKEFGLIDKVLAH 216
>gi|224419236|ref|ZP_03657242.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|253826954|ref|ZP_04869839.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313142738|ref|ZP_07804931.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|253510360|gb|EES89019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
gi|313131769|gb|EFR49386.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
canadensis MIT 98-5491]
Length = 196
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 151/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+V+E+T RGERSYDIYSRLLK+RI+ ++GQI+D +A I +QLLFLEAE+PQK+
Sbjct: 1 MSYYVPIVIEKTGRGERSYDIYSRLLKDRIIMLSGQIDDGVAASIVSQLLFLEAEDPQKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+G++IYDTM +IKP I T C+GQAASMG+ LLS G KG R++LPN+R
Sbjct: 61 IYLYINSPGGVVTSGLSIYDTMNYIKPDICTICIGQAASMGAFLLSCGTKGKRYSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LNEI N ++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAKEILRLKATLNEILADNTNQSLEKIAKDTDRDFFMSAKE 180
Query: 195 ACDWGVVDKVLMS 207
A D+G++D +L
Sbjct: 181 AKDYGLIDNILTK 193
>gi|319941575|ref|ZP_08015901.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
gi|319804945|gb|EFW01787.1| ATP-dependent Clp protease proteolytic subunit [Sutterella
wadsworthensis 3_1_45B]
Length = 196
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 112/196 (57%), Positives = 160/196 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVE + R ERS+DIYSRLL++RI+F+T ++ D A+LI AQLLFLE+E+P K+I
Sbjct: 1 MSLVPIVVESSGRSERSFDIYSRLLRDRIIFLTTEVNDQTASLIVAQLLFLESEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AGM+I+DTM+FI+P ++T C+G AASMG+ LL+AGEKG R+ALP++RI
Sbjct: 61 SLYINSPGGSVSAGMSIFDTMRFIRPKVNTICLGMAASMGAFLLAAGEKGKRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASD+E A+ ++ IKR++NE+ G++Y+E+ + DRD+ MSA EA
Sbjct: 121 MIHQPLGGAEGQASDVEIRARQLLLIKRQMNELMAGFTGRSYDELVRDTDRDNFMSAQEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
++G++D+VL SR D+
Sbjct: 181 LEYGLIDRVLTSRADL 196
>gi|114674891|ref|XP_512312.2| PREDICTED: endopeptidase Clp [Pan troglodytes]
Length = 277
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 116/203 (57%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 53 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 112
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 113 KPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 172
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 173 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSP 232
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 233 MEAQEFGILDKVLVHPPQDGEDE 255
>gi|188527362|ref|YP_001910049.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|217034159|ref|ZP_03439579.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|308182950|ref|YP_003927077.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|226706455|sp|B2UT37|CLPP_HELPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|188143602|gb|ACD48019.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Shi470]
gi|216943443|gb|EEC22899.1| hypothetical protein HP9810_868g52 [Helicobacter pylori 98-10]
gi|261839391|gb|ACX99156.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
52]
gi|297379992|gb|ADI34879.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Helicobacter
pylori v225d]
gi|308062114|gb|ADO04002.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Cuz20]
gi|308063422|gb|ADO05309.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Sat464]
gi|308065135|gb|ADO07027.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
PeCan4]
gi|315586542|gb|ADU40923.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
35A]
gi|317177376|dbj|BAJ55165.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F16]
gi|317180557|dbj|BAJ58343.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F32]
gi|317182104|dbj|BAJ59888.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F57]
Length = 195
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 155/195 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 181 KEYGLIDKVLEKNVK 195
>gi|73987256|ref|XP_854538.1| PREDICTED: similar to Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial precursor
(Endopeptidase Clp) [Canis familiaris]
Length = 273
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 114/203 (56%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG+VT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLQVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 229 MEAQEFGILDKVLVHPPQDGEDE 251
>gi|326203841|ref|ZP_08193703.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
papyrosolvens DSM 2782]
gi|325985939|gb|EGD46773.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
papyrosolvens DSM 2782]
Length = 194
Score = 232 bits (592), Expect = 2e-59, Method: Composition-based stats.
Identities = 104/194 (53%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDI+SRLL +RI+ ++ ++ D A+L+ AQ+L+LEA++P K+I
Sbjct: 1 MSLVPMVVEQTNRGERSYDIFSRLLNDRIIVLSDEVNDATASLVVAQMLYLEAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V +G AIYDTMQ++K +ST CMG AASMG+ LL+AGEKG RFALPN+ I
Sbjct: 61 QFYINSPGGSVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA++I++ + +LN+I + G+ +++E+ +RD MSA +A
Sbjct: 121 MIHQPLGGAKGQATDIKIHAENILRTRDKLNKILSERTGQPLDKIERDTERDFFMSADDA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D +++ R
Sbjct: 181 KAYGIIDDIMVRRK 194
>gi|5174419|ref|NP_006003.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Homo sapiens]
gi|3023512|sp|Q16740|CLPP_HUMAN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|62738031|pdb|1TG6|A Chain A, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738032|pdb|1TG6|B Chain B, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738033|pdb|1TG6|C Chain C, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738034|pdb|1TG6|D Chain D, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738035|pdb|1TG6|E Chain E, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738036|pdb|1TG6|F Chain F, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|62738037|pdb|1TG6|G Chain G, Crystallography And Mutagenesis Point To An Essential Role
For The N-Terminus Of Human Mitochondrial Clpp
gi|963048|emb|CAA90705.1| CLPP [Homo sapiens]
gi|12804197|gb|AAH02956.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|119589509|gb|EAW69103.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Homo sapiens]
gi|123998295|gb|ABM86749.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
gi|157929068|gb|ABW03819.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [synthetic construct]
Length = 277
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 116/203 (57%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 53 TRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 112
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 113 KPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 172
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 173 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSP 232
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 233 MEAQEFGILDKVLVHPPQDGEDE 255
>gi|47216266|emb|CAG05962.1| unnamed protein product [Tetraodon nigroviridis]
Length = 249
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 118/197 (59%), Positives = 156/197 (79%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +A+LI AQLLFL++E+ K
Sbjct: 26 WRSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLIIAQLLFLQSESNNK 85
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
I +YINSPGGVVTAG+AIYDTMQ+I PIST+C+GQAASMGSLLL+AG GMR +LPNA
Sbjct: 86 PIHMYINSPGGVVTAGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHSLPNA 145
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
R+++HQPSGG GQA+DI A++I+K+KR++N IY K+ G+ E +E ++RD MS
Sbjct: 146 RVMIHQPSGGARGQATDIAIQAEEILKLKRQINTIYAKHTGQPLETIESIMERDRYMSPM 205
Query: 194 EACDWGVVDKVLMSRID 210
EA D+G++D+VL+
Sbjct: 206 EAQDFGLIDRVLVHPPQ 222
>gi|15615680|ref|NP_243984.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|18203165|sp|Q9K888|CLPP2_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|10175740|dbj|BAB06837.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 143/193 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
G VP V+EQ+ ERSYDIYSRLLK+RIVF+ I+D +A I AQLLFLEAENP+K+
Sbjct: 1 MNGYVPYVIEQSGLSERSYDIYSRLLKDRIVFLGAAIDDQIANSIVAQLLFLEAENPKKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +AG AIYDTMQF+KP I T C G AAS ++LL AG KG RFALPN+
Sbjct: 61 IYLYINSPGGSTSAGFAIYDTMQFVKPSIHTICTGMAASFAAILLLAGTKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG GQASD+ A+ I+ I+ +L + + G++ E+V K +DRD+ MSA E
Sbjct: 121 IMIHQPSGGAQGQASDLAITAKRILGIREKLVTVTSERTGQSPEKVAKDMDRDYFMSAEE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G+VD+++ S
Sbjct: 181 ALEYGIVDQIITS 193
>gi|218510664|ref|ZP_03508542.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
Brasil 5]
gi|327192437|gb|EGE59394.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
CNPAF512]
Length = 203
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 120/200 (60%), Positives = 160/200 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I+LYINSPGGVVT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 NKPINLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGGRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFEHGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDI 211
A EA +WG++D++L R D
Sbjct: 181 AEEALEWGLIDRILKVREDT 200
>gi|18420643|ref|NP_568427.1| NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase
[Arabidopsis thaliana]
gi|75309225|sp|Q9FN42|CLPP2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 2,
mitochondrial; AltName: Full=Endopeptidase ClpP2;
AltName: Full=nClpP7; Flags: Precursor
gi|9759372|dbj|BAB09831.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Arabidopsis thaliana]
gi|26452073|dbj|BAC43126.1| putative ATP-dependent protease proteolytic subunit ClpP
[Arabidopsis thaliana]
gi|28950803|gb|AAO63325.1| At5g23140 [Arabidopsis thaliana]
gi|332005743|gb|AED93126.1| ATP-dependent Clp protease proteolytic subunit 2 [Arabidopsis
thaliana]
Length = 241
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 149/193 (77%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERI+ + G I D + ++ AQLL+LE+ENP K I
Sbjct: 31 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPINDDTSHVVVAQLLYLESENPSKPIH 90
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ+I+ PIST C+GQAASM SLLL+AG KG R +LPNA ++
Sbjct: 91 MYLNSPGGHVTAGLAIYDTMQYIRSPISTICLGQAASMASLLLAAGAKGQRRSLPNATVM 150
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA DI H + IV++ LNE+YVK+ G+ + V +DRDH M+ EA
Sbjct: 151 IHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPLDVVANNMDRDHFMTPEEAK 210
Query: 197 DWGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 211 AFGIIDEVIDERP 223
>gi|315453779|ref|YP_004074049.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis
ATCC 49179]
gi|315132831|emb|CBY83459.1| ATP-dependent clp protease proteolytic subunit [Helicobacter felis
ATCC 49179]
Length = 197
Score = 232 bits (592), Expect = 3e-59, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 151/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MNHIPFVIEKTGRGERSYDIYSRLLKDRIVLLSGEINDAVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VT+G +IYDTM +I P I T C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 NLYINSPGGSVTSGFSIYDTMNYIHPDICTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQAS++ + ++I+++K LN+I N G+ +++E+ DRD MSA EA
Sbjct: 121 MIHQPLGGTQGQASNLAIYTKEILRLKDLLNQIMATNTGQPLDKIEQDTDRDFFMSALEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G+VD+VL+
Sbjct: 181 KEYGLVDEVLVKSSK 195
>gi|85373054|ref|YP_457116.1| ATP-dependent Clp protease proteolytic subunit [Erythrobacter
litoralis HTCC2594]
gi|84786137|gb|ABC62319.1| ATP-dependent Clp protease [Erythrobacter litoralis HTCC2594]
Length = 234
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 135/213 (63%), Positives = 170/213 (79%), Gaps = 2/213 (0%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+G +D LVP+VVEQT+RGERS+DI+SRLL+ERIVFVTGQ+ED MA+LI AQL
Sbjct: 15 QGQFTRDPLTG--ALVPVVVEQTSRGERSFDIFSRLLRERIVFVTGQVEDGMASLITAQL 72
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ENP K IS+YINSPGGVVTAGMAI+DTMQ+IKP +ST CMGQAASMGS LL+AGE
Sbjct: 73 LFLESENPSKPISMYINSPGGVVTAGMAIHDTMQYIKPKVSTVCMGQAASMGSFLLAAGE 132
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
GMR ALPNARI++HQPSGG G ASDIE A++I++I++R+N++YVK G+ ++EK
Sbjct: 133 PGMRVALPNARIMVHQPSGGARGMASDIEIQAREILRIRKRMNDLYVKYTGQKLADIEKA 192
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+DRD + A EA +G+VDKV +R + E K
Sbjct: 193 MDRDTFLEAEEAMKFGLVDKVFETRPENEGGDK 225
>gi|282898110|ref|ZP_06306105.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281197254|gb|EFA72155.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 236
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 143/192 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D++A I AQLLFL+AE+P+K++
Sbjct: 31 SSIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTAIDDNVANSIVAQLLFLDAEDPEKDV 90
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V AGMAIYDT+Q I+P + T C G AASMG+ LL+AG G R +LP++RI
Sbjct: 91 QLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTAGTAGKRMSLPDSRI 150
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A++I+ IK LN++ K+ G+ E +E +RD MS EA
Sbjct: 151 MIHQPLGGAQGQAIDIEIQAREILYIKANLNQLMSKHTGQPLERIEADTERDFFMSPQEA 210
Query: 196 CDWGVVDKVLMS 207
D+G++D+V+
Sbjct: 211 KDYGLIDQVISR 222
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 145/192 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I +Y
Sbjct: 9 LPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIY 68
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 69 VNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIH 128
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE A++I+ +K LN + ++ G+ +++ + DRD+ +S +EA ++
Sbjct: 129 QPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYFLSPAEAVEY 188
Query: 199 GVVDKVLMSRID 210
G++D+V+ S D
Sbjct: 189 GLIDRVVDSSGD 200
>gi|189065189|dbj|BAG34912.1| unnamed protein product [Homo sapiens]
Length = 277
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 116/203 (57%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 53 TRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESSK 112
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 113 KPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 172
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 173 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSP 232
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 233 MEAQEFGILDKVLVHPPQDGEDE 255
>gi|114051824|ref|NP_001039879.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Bos taurus]
gi|118572228|sp|Q2KHU4|CLPP_BOVIN RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|86826474|gb|AAI12881.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Bos taurus]
gi|296485755|gb|DAA27870.1| caseinolytic peptidase, ATP-dependent, proteolytic subunit
precursor [Bos taurus]
Length = 272
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 115/203 (56%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 229 MEAQEFGILDKVLVHPPQDGEDE 251
>gi|157273309|gb|ABV27208.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Chloracidobacterium thermophilum]
Length = 199
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 117/192 (60%), Positives = 159/192 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+EQT RGER+YDIYSRLLK+ I+F++ I+D +A+L+ AQLLFLE+E+P+++IS
Sbjct: 7 ALIPMVIEQTGRGERAYDIYSRLLKDNIIFISTPIDDTVASLVVAQLLFLESEDPERDIS 66
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAGMAIYDTMQF+KP I TFC+GQ ASMG+LLL+AG KG R+ALP++RIL
Sbjct: 67 IYINSPGGSVTAGMAIYDTMQFVKPDIVTFCVGQCASMGALLLAAGTKGKRYALPHSRIL 126
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I +I+ + I K+ GK +E +E ++RD IMSA++A
Sbjct: 127 IHQPSGGAQGQATDILIQAEEIKRIRELTSTILAKHTGKPFEVIEADVERDRIMSATQAM 186
Query: 197 DWGVVDKVLMSR 208
++G+VD+VL SR
Sbjct: 187 EYGIVDQVLTSR 198
>gi|222824462|ref|YP_002576036.1| ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP
[Campylobacter lari RM2100]
gi|254763785|sp|B9KDZ6|CLPP_CAMLR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222539683|gb|ACM64784.1| ATP-dependent ClpAP/ClpXP protease, proteolytic subunit ClpP
[Campylobacter lari RM2100]
Length = 196
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 149/193 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P VVE+T+RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLFLEAE+PQK+
Sbjct: 1 MSSYIPYVVEKTSRGERSYDIYSRLLKDRIIMLSGEINDDLAASIVAQLLFLEAEDPQKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+G +IYDTM +IK +ST C+GQAASMG+ LLS G G RFALPN+R
Sbjct: 61 IYLYINSPGGVVTSGFSIYDTMNYIKADVSTICIGQAASMGAFLLSCGAPGKRFALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LN+I KN + ++EK DRD MSA E
Sbjct: 121 IMIHQPLGGARGQATDIEIQAKEILRLKAILNDILAKNTKQKLSKIEKDTDRDFFMSAIE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++DKVL
Sbjct: 181 AKEYGLIDKVLEK 193
>gi|257791675|ref|YP_003182281.1| Endopeptidase Clp [Eggerthella lenta DSM 2243]
gi|317487860|ref|ZP_07946452.1| Clp protease [Eggerthella sp. 1_3_56FAA]
gi|325830649|ref|ZP_08164070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eggerthella sp. HGA1]
gi|257475572|gb|ACV55892.1| Endopeptidase Clp [Eggerthella lenta DSM 2243]
gi|316912986|gb|EFV34503.1| Clp protease [Eggerthella sp. 1_3_56FAA]
gi|325487395|gb|EGC89837.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Eggerthella sp. HGA1]
Length = 207
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 104/206 (50%), Positives = 144/206 (69%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
S D L+P V+EQ+ RGERSYDIYSRLL +R++F+ QI+D++A + AQLL LE+ +
Sbjct: 2 SFDPKSALIPYVIEQSPRGERSYDIYSRLLNDRVIFLGEQIDDNVANSVVAQLLHLESAD 61
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+ISLYINSPGG VTAG+AI DTM FIK +ST C+G+ ASM ++LLS G KG R L
Sbjct: 62 PDKDISLYINSPGGSVTAGLAILDTMDFIKCDVSTICLGECASMAAVLLSNGAKGKRLCL 121
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+ +L+HQPSGG GQ ++I A ++K + RLN+I N G+T E ++ +RD+ M
Sbjct: 122 PNSMVLIHQPSGGAQGQQTEIAIVADFMLKTRNRLNKILADNTGQTLETIQNDTERDNYM 181
Query: 191 SASEACDWGVVDKVLMSRIDIEEKSK 216
+A EA +G+VD++ SR +
Sbjct: 182 TAEEAVAYGLVDRITTSRAVAPSTDE 207
>gi|114800297|ref|YP_760784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hyphomonas
neptunium ATCC 15444]
gi|114740471|gb|ABI78596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hyphomonas
neptunium ATCC 15444]
Length = 207
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 134/207 (64%), Positives = 177/207 (85%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
S L LVPMVVEQT+RGER++DI+SRLLKERI+FVTG I+D +A+LI AQLLFLE
Sbjct: 1 MSTSLQTALNLVPMVVEQTSRGERAFDIFSRLLKERIIFVTGGIDDGIASLITAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP++EI++YINSPGG V++G+AIYDTMQ+++ PIST C+GQAASMGSLLL+AGEKG+R
Sbjct: 61 SENPKREIAMYINSPGGYVSSGLAIYDTMQYVRCPISTVCIGQAASMGSLLLAAGEKGLR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNAR++LHQPSGG+SG A+DIERHA++I+++KRRLN+IYV++ G+ Y+ VE+ LDRD
Sbjct: 121 IALPNARVMLHQPSGGYSGVATDIERHAEEIIELKRRLNDIYVRHTGQEYDVVERKLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
++A EA ++G+VDKV R +EK
Sbjct: 181 TFLTAEEAMEFGIVDKVYERRTAEDEK 207
>gi|311031871|ref|ZP_07709961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. m3-13]
Length = 195
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 107/194 (55%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL AE+P K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL+AGEKG RFALPN+ +
Sbjct: 61 SLYINSPGGSITAGMAIYDTMNFIKPNVSTICVGMAASMGAFLLAAGEKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I + G+ E + + DRD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILFLREKLNTILSEQTGQPIEVISRDTDRDNFMTAERA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKV+
Sbjct: 181 LEYGLIDKVMNKNN 194
>gi|296232651|ref|XP_002761668.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Callithrix jacchus]
Length = 273
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 116/203 (57%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKVL+ E
Sbjct: 229 MEAQEFGILDKVLVHPPQDGEDE 251
>gi|212696598|ref|ZP_03304726.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325847156|ref|ZP_08169955.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|212676329|gb|EEB35936.1| hypothetical protein ANHYDRO_01138 [Anaerococcus hydrogenalis DSM
7454]
gi|325480936|gb|EGC83982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 195
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 120/189 (63%), Positives = 157/189 (83%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQTNRGER+YDIYSRLLK+RI+F+TG +ED ++ +I AQLLFLE+++P K+I
Sbjct: 7 LVPTVIEQTNRGERAYDIYSRLLKDRIIFLTGPVEDGVSDIIIAQLLFLESQDPNKDIQF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTM +IKP +ST C+GQAASMG++LLS+G KG RF+LPN+ IL+
Sbjct: 67 YINSPGGVVTAGLAIYDTMNYIKPDVSTICIGQAASMGAVLLSSGAKGKRFSLPNSNILI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI+ A+ I+KIK+RLN+I N G+T E+++K DRD M A EA +
Sbjct: 127 HQPSGGAQGQASDIQIQAEQILKIKKRLNKILSDNTGQTIEKIQKDTDRDFSMDAYEAKE 186
Query: 198 WGVVDKVLM 206
+G++DKV+
Sbjct: 187 YGLIDKVIE 195
>gi|15645413|ref|NP_207587.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
26695]
gi|108563204|ref|YP_627520.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPAG1]
gi|207108488|ref|ZP_03242650.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPKX_438_CA4C1]
gi|2493736|sp|P56156|CLPP_HELPY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|185177747|pdb|2ZL0|A Chain A, Crystal Structure Of H.Pylori Clpp
gi|185177748|pdb|2ZL0|B Chain B, Crystal Structure Of H.Pylori Clpp
gi|185177749|pdb|2ZL0|C Chain C, Crystal Structure Of H.Pylori Clpp
gi|185177750|pdb|2ZL0|D Chain D, Crystal Structure Of H.Pylori Clpp
gi|185177751|pdb|2ZL0|E Chain E, Crystal Structure Of H.Pylori Clpp
gi|185177752|pdb|2ZL0|F Chain F, Crystal Structure Of H.Pylori Clpp
gi|185177753|pdb|2ZL0|G Chain G, Crystal Structure Of H.Pylori Clpp
gi|185177754|pdb|2ZL0|H Chain H, Crystal Structure Of H.Pylori Clpp
gi|185177755|pdb|2ZL0|I Chain I, Crystal Structure Of H.Pylori Clpp
gi|185177756|pdb|2ZL0|J Chain J, Crystal Structure Of H.Pylori Clpp
gi|185177757|pdb|2ZL0|K Chain K, Crystal Structure Of H.Pylori Clpp
gi|185177758|pdb|2ZL0|L Chain L, Crystal Structure Of H.Pylori Clpp
gi|185177759|pdb|2ZL0|M Chain M, Crystal Structure Of H.Pylori Clpp
gi|185177760|pdb|2ZL0|N Chain N, Crystal Structure Of H.Pylori Clpp
gi|185177761|pdb|2ZL2|A Chain A, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177762|pdb|2ZL2|B Chain B, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177763|pdb|2ZL2|C Chain C, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177764|pdb|2ZL2|D Chain D, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177765|pdb|2ZL2|E Chain E, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177766|pdb|2ZL2|F Chain F, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177767|pdb|2ZL2|G Chain G, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177768|pdb|2ZL2|H Chain H, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177769|pdb|2ZL2|I Chain I, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177770|pdb|2ZL2|J Chain J, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177771|pdb|2ZL2|K Chain K, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177772|pdb|2ZL2|L Chain L, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177773|pdb|2ZL2|M Chain M, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|185177774|pdb|2ZL2|N Chain N, Crystal Structure Of H.Pylori Clpp In Complex With The
Peptide Nvlgftq
gi|2313923|gb|AAD07842.1| ATP-dependent clp protease proteolytic component (clpP)
[Helicobacter pylori 26695]
gi|107836977|gb|ABF84846.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori HPAG1]
Length = 196
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 113/196 (57%), Positives = 155/196 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+
Sbjct: 1 MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++R
Sbjct: 61 IGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKE 180
Query: 195 ACDWGVVDKVLMSRID 210
A ++G++DKVL +
Sbjct: 181 AKEYGLIDKVLQKNVK 196
>gi|251794211|ref|YP_003008942.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247541837|gb|ACS98855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VPMV+EQ+NRGER+YDIYSRLLK+RI+F+ + D +A I AQ+LFL AE+P+K+I
Sbjct: 3 MNFVPMVIEQSNRGERAYDIYSRLLKDRIIFLGSGVNDVVANSIIAQMLFLAAEDPEKDI 62
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMG+ LL+AG G R+ALPN+ +
Sbjct: 63 SLYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEV 122
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A+ I+K++ +LN I + G+ E +EK DRD+ MSA EA
Sbjct: 123 MIHQPLGGAEGQASDIEIRARRIIKMRDKLNGILAERSGQPLERIEKDTDRDYFMSAEEA 182
Query: 196 CDWGVVDKVLMS 207
+G+VDKV+
Sbjct: 183 RQYGLVDKVIER 194
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 114/190 (60%), Positives = 159/190 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQT++GERSYDIYSRLLK+RI+FVTG+IEDHMA LI AQLLFLE+E+P K++
Sbjct: 1 MSYVPIVVEQTSKGERSYDIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDV 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+I+P +ST C+G AASM S+LL+AG KG R+ALP++R+
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA++I++I+ +N+I + G+T E++ +RDH M+A EA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEA 180
Query: 196 CDWGVVDKVL 205
++G++D+V+
Sbjct: 181 ANYGLIDQVV 190
>gi|298529124|ref|ZP_07016527.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
gi|298510560|gb|EFI34463.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
Length = 202
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 112/198 (56%), Positives = 157/198 (79%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PMV+E T RGER+YD+YSRLLK+RI+ + I+DH+A LICAQLLFLE+E+ ++EI+ Y
Sbjct: 5 IPMVIESTGRGERAYDLYSRLLKDRIILLGTPIDDHVANLICAQLLFLESESQEREINFY 64
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ+I P++T C+GQAASMG+LLL+AG+ GMR+ALP++RIL+H
Sbjct: 65 INSPGGSVTAGLAIYDTMQYISAPVATLCLGQAASMGALLLAAGQSGMRYALPHSRILIH 124
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GGF GQA+DI+ A++I+++K +LN I + ++E DRD+ + A EA D+
Sbjct: 125 QPMGGFKGQATDIDIQAKEIIRLKSKLNNILAHHTKVDLAKIEHDTDRDYYLEAQEAQDY 184
Query: 199 GVVDKVLMSRIDIEEKSK 216
G++D VL SR +I++ K
Sbjct: 185 GLIDSVLTSRSEIDKTGK 202
>gi|224147635|ref|XP_002336515.1| predicted protein [Populus trichocarpa]
gi|222835812|gb|EEE74247.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 155/197 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQ+ RGERS+DIYSRLL++R++F+ G++ D ++ L+CAQLLFLEAENP K I
Sbjct: 5 MMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDVVSALVCAQLLFLEAENPDKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE G R ALPNA +
Sbjct: 65 HLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQASDI HA+++++ K R+ +Y ++CG++YEEVE+ LDRD M+A EA
Sbjct: 125 HVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYEEVERDLDRDRFMTAEEA 184
Query: 196 CDWGVVDKVLMSRIDIE 212
+WG++DKVL R
Sbjct: 185 REWGLIDKVLDRRTATP 201
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
Length = 199
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 115/192 (59%), Positives = 158/192 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVEQT++GERSYDIYSRLLK+RI+FVTG+IEDHMA LI AQLLFLE+E+P K+I
Sbjct: 4 VSYVPIVVEQTSKGERSYDIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLESEDPDKDI 63
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ+I+P +ST C+G AASM S+LL+AG KG RFALP++R+
Sbjct: 64 HLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRFALPHSRV 123
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE HA++I++++ +N+I + GK E ++ +RDH ++A EA
Sbjct: 124 MIHQPLGGAQGQATDIEIHAREILRVREEMNQILAAHTGKDPETIKLDTERDHYLTADEA 183
Query: 196 CDWGVVDKVLMS 207
+G++D+V+ S
Sbjct: 184 LSYGLIDQVVAS 195
>gi|212704616|ref|ZP_03312744.1| hypothetical protein DESPIG_02679 [Desulfovibrio piger ATCC 29098]
gi|212672015|gb|EEB32498.1| hypothetical protein DESPIG_02679 [Desulfovibrio piger ATCC 29098]
Length = 200
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 114/200 (57%), Positives = 170/200 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+E T R ER+YDIYSRLLK+RI+ ++ ++ D +A+L+CAQLLFLE+++P+KEI
Sbjct: 1 MSLVPMVIETTGRSERAYDIYSRLLKDRIILLSSEVNDTVASLVCAQLLFLESQDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAG+AIYDTM++I P+ST CMG+AASMG+ LL+AG+KGMR+ALPN++I
Sbjct: 61 NLYINSPGGSVTAGLAIYDTMRYITAPVSTVCMGRAASMGAFLLAAGQKGMRYALPNSQI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+D++ HA+++++IK RLN + +N GK+Y+EV + +RD+ ++ +A
Sbjct: 121 MIHQPLGGFQGQATDVDIHAREMLRIKERLNTMLAENTGKSYDEVVRATERDNFLTPEQA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G++D+VL+SR D+ EK+
Sbjct: 181 LEFGIIDRVLVSRSDMTEKN 200
>gi|163746712|ref|ZP_02154069.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45]
gi|161379826|gb|EDQ04238.1| Endopeptidase Clp [Oceanibulbus indolifex HEL-45]
Length = 218
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 119/209 (56%), Positives = 155/209 (74%), Gaps = 1/209 (0%)
Query: 8 KKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + ++ LVPMVVEQT+RGERSYDI+SRLLKERI+FV G I M+ L+ AQLL L
Sbjct: 1 MNDPINTYMNTLVPMVVEQTSRGERSYDIFSRLLKERIIFVNGPIHSGMSHLVVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGG VTAG++IYDTMQ+IKP +ST G AASMGS++ GEKGM
Sbjct: 61 EAENPTKEISMYINSPGGEVTAGLSIYDTMQYIKPKVSTLICGMAASMGSVIAIGGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNA +++HQPSGG G A DI A+ I + + R+ ++YVK+ G+ + V+K LDR
Sbjct: 121 RFALPNAEVMIHQPSGGSQGMAEDILISARHIERTRERMYQLYVKHSGQPLDVVQKALDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D M+ EA +WG +D+++ SR E+ +
Sbjct: 181 DLWMTPEEAKEWGHLDEIVESRGKAEDAA 209
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 144/198 (72%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+S + +P VVEQ+ RGER++DIYSRLL+ERI+F+ I D + + AQLLFLEAE
Sbjct: 5 ESVNNTKSAIPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAE 64
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P K+I +YINSPGG VTAG+AIYDTMQ I P + T C G AASMG+ LLS G KG R A
Sbjct: 65 DPDKDIQIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLA 124
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQP GG GQA +IE A++I+ +K+ LN + ++ G++ E++ + +RD+
Sbjct: 125 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYF 184
Query: 190 MSASEACDWGVVDKVLMS 207
+S EA +G++DKV+ +
Sbjct: 185 LSPEEAVQYGLIDKVIKN 202
>gi|220903965|ref|YP_002479277.1| Endopeptidase Clp [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
gi|259585948|sp|B8IYM2|CLPP_DESDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219868264|gb|ACL48599.1| Endopeptidase Clp [Desulfovibrio desulfuricans subsp. desulfuricans
str. ATCC 27774]
Length = 202
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 116/202 (57%), Positives = 168/202 (83%), Gaps = 1/202 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMV+E T R ER+YDIYSRLLK+RIV + ++ D +A+LICAQLLFLE+++P+KEI
Sbjct: 1 MSLIPMVIETTGRSERAYDIYSRLLKDRIVLLGSEVNDTVASLICAQLLFLESQDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAG+AIYDT++FI P+ST CMG+AASMG+ LL+AG+ G+R+ALPN++I
Sbjct: 61 SLYINSPGGSVTAGLAIYDTLRFISAPVSTVCMGRAASMGAFLLAAGKPGLRYALPNSQI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPS G+ GQA+DIE HA++++++K RLN I +N G+ Y+++ K +RD+ ++ EA
Sbjct: 121 MIHQPSAGYQGQATDIEIHAKEVLRLKERLNRILAENTGRPYKDIVKATERDNFLTPEEA 180
Query: 196 CDWGVVDKVLMSRIDI-EEKSK 216
D G++D+VL+SR D+ +EKS+
Sbjct: 181 KDLGIIDRVLVSRQDMAQEKSE 202
>gi|190892539|ref|YP_001979081.1| endopeptidase Clp protein, subunit 1 [Rhizobium etli CIAT 652]
gi|218516193|ref|ZP_03513033.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
8C-3]
gi|190697818|gb|ACE91903.1| endopeptidase Clp protein, subunit 1 [Rhizobium etli CIAT 652]
Length = 203
Score = 232 bits (591), Expect = 3e-59, Method: Composition-based stats.
Identities = 119/200 (59%), Positives = 159/200 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I+LYINSPGG VT+G+A+YDTM+FI P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 NKPINLYINSPGGAVTSGLAMYDTMRFIHAPVHTLCMGTARSMGSFLLMAGEPGERAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDI 211
A EA +WG++D++L R D
Sbjct: 181 AEEALEWGLIDRILKVREDT 200
>gi|304440714|ref|ZP_07400598.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304370901|gb|EFM24523.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 194
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E TNRGER+YDIYSRLLKERI+F++G+I + A L+ AQLLFLE+E+P K+I
Sbjct: 1 MALVPTVIEMTNRGERAYDIYSRLLKERIIFISGEINNVTADLVVAQLLFLESEDPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG AI+DTM +IKP +ST C+G AASMG+ LL+AG+KG RFALPN+ I
Sbjct: 61 QIYINSPGGSVSAGFAIFDTMNYIKPDVSTICIGMAASMGAFLLAAGKKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI HA+ I++I++R+N+I + G+ E++E DRD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQASDIMIHAEKIIEIRQRINKILAEETGQPLEKIEHDTDRDYFLSADEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D V+ R
Sbjct: 181 KEYGLIDNVIRERD 194
>gi|145219256|ref|YP_001129965.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris vibrioformis DSM 265]
gi|189082462|sp|A4SDA4|CLPP_PROVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145205420|gb|ABP36463.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeovibrioides DSM 265]
Length = 225
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 106/204 (51%), Positives = 153/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 EGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++I +Y+NSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G KG R +LP
Sbjct: 82 DRDIFIYVNSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ SDI A++I KI+R L EI K+ GK ++V + +RD M
Sbjct: 142 HSRIMIHQPSGGAQGQESDIIIQAREIEKIRRLLEEIMAKHTGKDVQQVREDSERDRWMD 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA ++G++D+V R E+K
Sbjct: 202 AGEALEYGIIDQVFEKRPAPEKKD 225
>gi|281339765|gb|EFB15349.1| hypothetical protein PANDA_017639 [Ailuropoda melanoleuca]
Length = 272
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 116/205 (56%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG+VT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRI-DIEEKSK 216
EA ++G++DKVL+ D E++ K
Sbjct: 229 MEAQEFGILDKVLVHPPQDGEDEPK 253
>gi|116256435|sp|Q3ANI8|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 145/192 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I +Y
Sbjct: 9 LPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIY 68
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 69 INSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIH 128
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE A++I+ +K LN + ++ G+ +++ + DRD+ +S +EA ++
Sbjct: 129 QPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEY 188
Query: 199 GVVDKVLMSRID 210
G++D+V+ S D
Sbjct: 189 GLIDRVVDSSGD 200
>gi|15611797|ref|NP_223448.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
J99]
gi|308184578|ref|YP_003928711.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|6685330|sp|Q9ZL50|CLPP_HELPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4155294|gb|AAD06311.1| ATP-DEPENDENT PROTEASE, PROTEOLYTIC SUBUNIT [Helicobacter pylori
J99]
gi|308060498|gb|ADO02394.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SJM180]
gi|317014204|gb|ADU81640.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Gambia94/24]
gi|325996073|gb|ADZ51478.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2018]
gi|325997669|gb|ADZ49877.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
2017]
Length = 195
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTERGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 181 KEYGLIDKVLQKNVK 195
>gi|328950943|ref|YP_004368278.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451267|gb|AEB12168.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 194
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 100/193 (51%), Positives = 145/193 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP V+EQT RGER YDIYSRLLK+RI+F+ I+ +A + AQ+LFLEA+NP +EI L
Sbjct: 2 VVPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDTQVANTVVAQILFLEAQNPNQEIKL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQ+++ P+ST C+G AASM +++L+AGE G R+ALP++R+++
Sbjct: 62 YINSPGGEVDAGLAIYDTMQYVRAPVSTICVGLAASMAAVILAAGEPGRRYALPHSRVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DI A+ I+K++ LN+I ++ G+ E+V + DR+ M A A +
Sbjct: 122 HQPWGGARGQAADIAIEAEQILKMRENLNKILSQHTGQPLEKVTRDTDRNFWMDAQMAKE 181
Query: 198 WGVVDKVLMSRID 210
+G+VD+V+ +
Sbjct: 182 YGIVDQVVSREAE 194
>gi|319787636|ref|YP_004147111.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Pseudoxanthomonas suwonensis 11-1]
gi|317466148|gb|ADV27880.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudoxanthomonas suwonensis 11-1]
Length = 209
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 123/198 (62%), Positives = 165/198 (83%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L LVPMVVEQT+RGER+YDIYSRLLKER++F+ G +EDH+A +I AQ+LFLEAENP+
Sbjct: 6 TKALNLVPMVVEQTSRGERAYDIYSRLLKERVIFLVGPVEDHVANVIIAQMLFLEAENPE 65
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ISLYINSPGG+VTAGMAIYDTMQ+IKP +ST C+GQAASMG++LL+AG G R+ALPN
Sbjct: 66 KDISLYINSPGGLVTAGMAIYDTMQYIKPDVSTICVGQAASMGAVLLAAGAAGKRYALPN 125
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GGF GQA+DI+ HA++I+ ++ RLNEI ++ G++ E + + +RD+ SA
Sbjct: 126 SRVMIHQPLGGFQGQATDIDIHAREILSMRARLNEILAQHTGQSIETIARDTERDNFKSA 185
Query: 193 SEACDWGVVDKVLMSRID 210
+EA +G+VD+VL R D
Sbjct: 186 AEAKAYGLVDEVLERRPD 203
>gi|224373739|ref|YP_002608111.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
gi|223589486|gb|ACM93222.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nautilia
profundicola AmH]
Length = 196
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 118/195 (60%), Positives = 158/195 (81%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+E+T RGER+YDIYSRLLK+RI+ + G+I DH++++I AQ+LFLEAENP+K+
Sbjct: 1 MSILVPTVIEKTGRGERAYDIYSRLLKDRIIMLQGEINDHVSSIIVAQMLFLEAENPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+GMAIYDTM +IKP + T CMGQAASMG+ LLS+G KG RFALP+AR
Sbjct: 61 IYLYINSPGGVVTSGMAIYDTMNYIKPDVVTICMGQAASMGAFLLSSGAKGKRFALPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE HA++I+++K+ LN+I +N G++ ++E+ +RD MSA E
Sbjct: 121 IMIHQPLGGAQGQATDIEIHAKEILRMKKELNKILAENTGQSVRKIERDTERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++DKVL R
Sbjct: 181 AMKYGLIDKVLKKRD 195
>gi|237753395|ref|ZP_04583875.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
gi|229375662|gb|EEO25753.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
winghamensis ATCC BAA-430]
Length = 196
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 111/190 (58%), Positives = 151/190 (79%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP V+E+T RGER+YDIYSRLLK+RI+ ++GQI+D +A+ I AQLLFLEAE+P+K+I L
Sbjct: 4 YVPTVIEKTGRGERAYDIYSRLLKDRIILLSGQIDDGLASSIVAQLLFLEAEDPEKDIYL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G++IYDTM ++KP IST C+GQAASMG+ LLS G KG R++LPN+RI++
Sbjct: 64 YINSPGGVVTSGLSIYDTMNYVKPDISTICIGQAASMGAFLLSCGTKGKRYSLPNSRIMI 123
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++IE A++I+++K LNEI N + E++ K DRD +SA EA +
Sbjct: 124 HQPLGGAQGQATEIEIQAKEILRLKSSLNEILASNTNQPLEKIAKDTDRDFYLSAKEAQE 183
Query: 198 WGVVDKVLMS 207
+G++D VL
Sbjct: 184 YGLIDSVLEK 193
>gi|257865163|ref|ZP_05644816.1| peptidase S14 [Enterococcus casseliflavus EC30]
gi|257871487|ref|ZP_05651140.1| peptidase S14 [Enterococcus casseliflavus EC10]
gi|257874785|ref|ZP_05654438.1| peptidase S14 [Enterococcus casseliflavus EC20]
gi|325571575|ref|ZP_08147075.1| ATP-dependent Clp protease, protease subunit [Enterococcus
casseliflavus ATCC 12755]
gi|257799097|gb|EEV28149.1| peptidase S14 [Enterococcus casseliflavus EC30]
gi|257805651|gb|EEV34473.1| peptidase S14 [Enterococcus casseliflavus EC10]
gi|257808951|gb|EEV37771.1| peptidase S14 [Enterococcus casseliflavus EC20]
gi|325156051|gb|EGC68247.1| ATP-dependent Clp protease, protease subunit [Enterococcus
casseliflavus ATCC 12755]
Length = 196
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 108/194 (55%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++GQ+ D +A I AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGQVTDDLANSIIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AI+DTM FIK + T MG AASMGS LL+AGEKG RFALPNA I
Sbjct: 61 YLYINSPGGSVTAGLAIFDTMNFIKADVQTIVMGMAASMGSFLLTAGEKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ + RLN+I + G+ E +E+ DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILATRERLNKILSERTGQPIEVIERDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+++ S
Sbjct: 181 KDYGLIDEIMESNK 194
>gi|262373455|ref|ZP_06066733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
junii SH205]
gi|262311208|gb|EEY92294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acinetobacter
junii SH205]
Length = 201
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP+VVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP+K+I
Sbjct: 8 NALVPVVVEQSSRGERSFDIYSRLLRERVIFLTGEVEDNMANLIVAQMLFLEAENPEKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL+AG KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNAGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAQHSGQDYETVARDTDRDNFMTAEAA 187
Query: 196 CDWGVVDKVLMSRI 209
+G+VD+VL R
Sbjct: 188 KQYGLVDQVLSKRP 201
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 154/191 (80%)
Query: 22 VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
V+E T RGER YDIYSRLLK+RIV + I+DH+A ICAQLLFLE+ENP+K+I +YINS
Sbjct: 8 VIENTGRGERMYDIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINS 67
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG VTAGMAIYDTMQ+I P++T C+GQAASM ++LL+AGEKGMR+ LP++RI++HQP
Sbjct: 68 PGGAVTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQPM 127
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GGF GQA+DI A++I++++ LN I + G+T E+VE+ +RD+ MS EAC +G++
Sbjct: 128 GGFQGQATDIAIQAKEIIRLRGELNGILANHTGQTLEKVEQDTERDYFMSGEEACAYGLI 187
Query: 202 DKVLMSRIDIE 212
D+VL SR ++E
Sbjct: 188 DQVLASRKELE 198
>gi|218672149|ref|ZP_03521818.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
GR56]
Length = 203
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 120/202 (59%), Positives = 163/202 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGVVT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPINLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGERAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A EA +WG++D++L R D +
Sbjct: 181 AEEALEWGLIDRILKVREDTDS 202
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 113/200 (56%), Positives = 155/200 (77%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
++ + + VP+V+E T R ER+YDIYSRLLK+RI+F+ I+DH+A L+ AQLLFL
Sbjct: 3 MDRELKKILDQYVPIVIESTGRYERAYDIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFL 62
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP K+I LYINSPGG+VTAG+AIYDTMQ++K ++T C+GQAASMG++LL+AG KG
Sbjct: 63 EAENPDKDIQLYINSPGGLVTAGLAIYDTMQYVKCDVATICVGQAASMGAVLLAAGAKGK 122
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPN+RI++HQP GG G A D+E +++++IKR +NEI K+ G+ E +EK DR
Sbjct: 123 RFALPNSRIMIHQPLGGAEGSAKDVEILTKELLRIKRIINEILSKHTGQDIERIEKDTDR 182
Query: 187 DHIMSASEACDWGVVDKVLM 206
D MSA EA ++G++DKV+
Sbjct: 183 DFFMSAQEAMEYGIIDKVIK 202
>gi|119510658|ref|ZP_01629787.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119464709|gb|EAW45617.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 210
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 147/200 (73%), Gaps = 1/200 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ I+D +A I AQLLFL+AE+ +K+I
Sbjct: 6 NIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPIDDTVANSIVAQLLFLDAEDSEKDIQ 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AGMAIYDTMQ I+P + T C G AASMG+ LL+AG G R +LP++RI+
Sbjct: 66 IYINSPGGSVYAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLAAGSAGKRMSLPDSRIM 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K +LN++ + G+ E +E +RD MSA EA
Sbjct: 126 IHQPLGGAQGQAIDIEIQAREILYVKAKLNQLLGHHTGQPLERLEADTERDFFMSAEEAK 185
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
++G++D+V+ SR +I +
Sbjct: 186 NYGLIDQVI-SRQNIPTAGE 204
>gi|194334636|ref|YP_002016496.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
gi|194312454|gb|ACF46849.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prosthecochloris aestuarii DSM 271]
Length = 226
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 155/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A+L+ AQL+FLE+E+P
Sbjct: 22 QGIQNSLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDEHVASLLMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +YINSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G K R +LP
Sbjct: 82 ERDIYIYINSPGGSVSAGLGIYDTMQYIRPEVSTVCVGMAASMGAFLLASGAKDKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI++ L+EI ++ G+ +++ +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQETDILIQAREIEKIRKLLDEILAQHTGQDVQKIRSDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA +G++D++ R +++K
Sbjct: 202 AEEAKAYGIIDQIFDRRPALDKKD 225
>gi|255019392|ref|ZP_05291501.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
caldus ATCC 51756]
gi|254971164|gb|EET28617.1| ATP-dependent Clp protease proteolytic subunit [Acidithiobacillus
caldus ATCC 51756]
Length = 214
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 129/207 (62%), Positives = 167/207 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E LG VPMV+EQT RGER++DIYSRLLKER++F+ G +ED MA L+ AQLLFLE
Sbjct: 8 SRAPEIHNLGYVPMVIEQTGRGERAFDIYSRLLKERVIFLVGPVEDLMANLVVAQLLFLE 67
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP K+I+LYINSPGG VTAG+AIYDTMQFI+P +ST C+GQAASMG++LL+AG G R
Sbjct: 68 AENPDKDIALYINSPGGSVTAGLAIYDTMQFIRPAVSTVCIGQAASMGAVLLAAGAAGKR 127
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ALPNARI+LHQPSGG+ G A DIE HA++I++I++RLNEI V++ G++ + +E+ LDRD
Sbjct: 128 YALPNARIMLHQPSGGYQGVAHDIEIHAKEILRIRQRLNEILVEHTGQSQQRIEQDLDRD 187
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEK 214
MSA EA D+ +VD V+ R D E+
Sbjct: 188 FFMSAQEAKDYHLVDSVITHRGDNEDA 214
>gi|156541196|ref|XP_001599209.1| PREDICTED: hypothetical protein [Nasonia vitripennis]
Length = 234
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 114/199 (57%), Positives = 154/199 (77%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
K S L LVP+VVEQT RGER+YDIYSRLLKERI+ + G I D +++L+ AQLLFL++
Sbjct: 16 KKSCTRSLNLVPIVVEQTGRGERAYDIYSRLLKERIICLMGPITDDISSLVVAQLLFLQS 75
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+ +K I LYINSPGGVVTAG+ IYDTMQ++ PP++T+C+GQA SM SLLL+AG GMR
Sbjct: 76 ESSKKPIHLYINSPGGVVTAGLGIYDTMQYVLPPVATWCVGQACSMASLLLAAGAPGMRH 135
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPNARI++HQPSGG GQA+DI A++I+K+K ++N +Y K+ G + +E ++RD
Sbjct: 136 ALPNARIMIHQPSGGVQGQATDIRIQAEEILKLKGQINALYAKHTGLDIQRIENNMERDK 195
Query: 189 IMSASEACDWGVVDKVLMS 207
M+ EA ++G++DKVL
Sbjct: 196 FMTPIEAKEFGIIDKVLEH 214
>gi|167855227|ref|ZP_02477997.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
gi|167853680|gb|EDS24924.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
Length = 193
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 157/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++PMVVEQ+++GER+YDIYSRLLKERI+F+ G +ED MA LI AQ+LFLEAE+P+K+I
Sbjct: 1 MAVIPMVVEQSSKGERAYDIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIKP +ST CMGQA SMG+ LLS+G KG RFALPN+R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSSGAKGKRFALPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DI+ HAQ+I+K+K L ++C + +E+V + +RD+ MSA EA
Sbjct: 121 MIHQPLGGYRGQATDIQIHAQEILKLKEMLTRKMAEHCSQPFEKVAQDTERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ R
Sbjct: 181 KAYGLIDDVVTKR 193
>gi|301784789|ref|XP_002927807.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Ailuropoda melanoleuca]
Length = 273
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 116/205 (56%), Positives = 160/205 (78%), Gaps = 1/205 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG+VT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGMVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQSLRVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRI-DIEEKSK 216
EA ++G++DKVL+ D E++ K
Sbjct: 229 MEAQEFGILDKVLVHPPQDGEDEPK 253
>gi|300865787|ref|ZP_07110541.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
gi|300336200|emb|CBN55696.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
sp. PCC 6506]
Length = 203
Score = 231 bits (590), Expect = 4e-59, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 145/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RIVF+ Q+ +A LI AQLLFL+AE+P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRDRIVFLGQQVTSDLANLIVAQLLFLDAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM I+DTM I+P +ST C+G AASMG+ LLSAG KG R LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIFDTMNHIRPEVSTICLGLAASMGAFLLSAGAKGKRMTLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ KRRLNE + G+ +E+ +RD MSA+EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKRRLNEHLAAHTGQPLSRIEEDTERDFFMSAAEATE 180
Query: 198 WGVVDKVLMSRI 209
+G+VD V+ R
Sbjct: 181 YGLVDLVIDRRP 192
>gi|329922862|ref|ZP_08278378.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|328941635|gb|EGG37920.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 193
Score = 231 bits (590), Expect = 5e-59, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 142/192 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP VVEQTNRGERSYDIYSRLLK+RIVFV I+D +A I AQLLFL AE+P+K+I
Sbjct: 1 MNFVPYVVEQTNRGERSYDIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG IYDTMQ IKP ++T C G AAS G++LL AG KG R ALPN+ I
Sbjct: 61 HMYINSPGGSVSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A+ I+K + +L I + G++ E VEK ++RD+ MSA EA
Sbjct: 121 MIHQPLGGVQGQATDIAITAKRILKTREKLAHIISERTGQSVERVEKDMERDYFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D ++
Sbjct: 181 KEYGIIDDIVTK 192
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 104/189 (55%), Positives = 146/189 (77%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V+EQ+ RGER++DIYSRLL+ERIVF+ Q++ ++A LI AQLLFL+AE+P+K+I LY
Sbjct: 3 IPIVIEQSGRGERAFDIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++H
Sbjct: 63 INSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+ KRRLN+ ++ G+ E + + +RD MS EA D+
Sbjct: 123 QPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAKDY 182
Query: 199 GVVDKVLMS 207
G++D+V+
Sbjct: 183 GLIDQVIDR 191
>gi|225164221|ref|ZP_03726495.1| Endopeptidase Clp [Opitutaceae bacterium TAV2]
gi|224801160|gb|EEG19482.1| Endopeptidase Clp [Opitutaceae bacterium TAV2]
Length = 222
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 152/193 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+V+E T RGERS DIYSRLLK+RI+F+ I+D +A ++ AQLLFL+ E+P+K+I L
Sbjct: 20 YVPIVLENTGRGERSMDIYSRLLKDRIIFIGTPIDDGVANVVIAQLLFLQMEDPKKDIHL 79
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT GMAIYDT+ F++ + T+C+GQAASM ++LLSAG KG RFALPN+R+++
Sbjct: 80 YINSPGGVVTGGMAIYDTINFLQCDVVTYCVGQAASMATVLLSAGTKGKRFALPNSRVMI 139
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQA+DI A++I++ +R L+E ++ GKT E+V+K DRD+ +SA EA D
Sbjct: 140 HQPSGGAGGQAADITIAAKEILRWRRTLSETIARHTGKTPEQVDKDSDRDYYLSAQEAKD 199
Query: 198 WGVVDKVLMSRID 210
+G+VD V+ S D
Sbjct: 200 YGLVDHVVTSTRD 212
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 100/190 (52%), Positives = 145/190 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQ+ RGER++DIYSRLL+ERI+F+ Q++ +A LI AQLLFL+AE+P+K+I +
Sbjct: 1 MIPIVIEQSGRGERAFDIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ KR+LN ++ G+ E + + +RD MS EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYHKRKLNGYLAQHTGQPLERIAEDTERDFFMSPEEAQE 180
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 181 YGLIDQVIDR 190
>gi|291277236|ref|YP_003517008.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
gi|290964430|emb|CBG40280.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
mustelae 12198]
Length = 195
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 108/192 (56%), Positives = 149/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T +GERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+ QK+I
Sbjct: 1 MNYIPYVIERTGKGERSYDIYSRLLKDRIVLLSGEINDMVASSIVAQLLFLEAEDAQKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VT+ +IYDTM +I+P ++T C+GQAAS G+LLLS+G KG R++LPN+RI
Sbjct: 61 YFYINSPGGAVTSAFSIYDTMHYIRPDVATICVGQAASAGALLLSSGAKGKRYSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A +I+++K+ LNEI N G++ ++V + +RD MSA EA
Sbjct: 121 MIHQPLGGAQGQATDIEIQANEILRLKKILNEILASNTGQSLKKVSQDTERDFFMSAMEA 180
Query: 196 CDWGVVDKVLMS 207
+G+VDKVL
Sbjct: 181 QKYGLVDKVLEK 192
>gi|261408153|ref|YP_003244394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|261284616|gb|ACX66587.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
Length = 198
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 111/196 (56%), Positives = 145/196 (73%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
ED + +VP VVEQTNRGERSYDIYSRLLK+RIVFV I+D +A I AQLLFL AE+P
Sbjct: 2 EDETMNIVPYVVEQTNRGERSYDIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I +YINSPGG V+AG IYDTMQ IKP ++T C G AAS G++LL AG KG R ALP
Sbjct: 62 EKDIHMYINSPGGSVSAGFGIYDTMQIIKPQVNTICTGFAASYGAILLLAGAKGKRLALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA+DI A+ I+K + +L I + G++ E VEK ++RD+ MS
Sbjct: 122 NSEIMIHQPLGGVQGQATDIAITAKRILKTREKLAHIISERTGQSVERVEKDMERDYFMS 181
Query: 192 ASEACDWGVVDKVLMS 207
A EA ++G++D ++
Sbjct: 182 AEEAKEYGIIDDIVTK 197
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 101/204 (49%), Positives = 155/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 QGITNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +YINSPGG V+AG+ IYDTMQ+I+P +ST C+G AASMG+ LL++G KG R +LP
Sbjct: 82 ERDIYIYINSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI++ L+E+ ++ GK +++ + +RD M+
Sbjct: 142 HSRIMIHQPSGGAHGQETDIIIQAREIEKIRKLLDELLARHTGKDVKQIREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA ++G++D V R E+K
Sbjct: 202 AEEALEYGIIDSVFEKRPMPEKKD 225
>gi|284047279|ref|YP_003397619.1| endopeptidase Clp [Conexibacter woesei DSM 14684]
gi|283951500|gb|ADB54244.1| Endopeptidase Clp [Conexibacter woesei DSM 14684]
Length = 194
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 101/194 (52%), Positives = 140/194 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQ+ RGERS+DIYSRLL ER++F+ ++ D +A L+ AQLL LE+ + K+
Sbjct: 1 MSPLVPMVVEQSPRGERSFDIYSRLLNERVIFLGQEVNDDIANLVVAQLLHLESVDADKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG V+AG AIYDTMQ I+P ++T C+G A SMGS LL G G R +LPN+R
Sbjct: 61 INLYINSPGGSVSAGFAIYDTMQLIRPDVATICVGIAMSMGSFLLCGGASGKRMSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL HQPSGGF GQA+DI+ HA++ + +RRL E+Y + G+ E + ++RD + +
Sbjct: 121 ILNHQPSGGFQGQATDIQIHAEEALAARRRLEELYALHTGQPIERIHDDMERDRYFTPEQ 180
Query: 195 ACDWGVVDKVLMSR 208
A ++G++DK+ R
Sbjct: 181 AVEYGLIDKIYERR 194
>gi|208434705|ref|YP_002266371.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori G27]
gi|210134994|ref|YP_002301433.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
P12]
gi|217032887|ref|ZP_03438364.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298736497|ref|YP_003729023.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|116243140|sp|Q1CT76|CLPP_HELPH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706454|sp|B5Z7F6|CLPP_HELPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|208432634|gb|ACI27505.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori G27]
gi|210132962|gb|ACJ07953.1| ATP-dependent clp protease proteolytic component [Helicobacter
pylori P12]
gi|216945381|gb|EEC24049.1| hypothetical protein HPB128_152g4 [Helicobacter pylori B128]
gi|298355687|emb|CBI66559.1| ATP-dependent Clp protease, protease subunit [Helicobacter pylori
B8]
gi|317009196|gb|ADU79776.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
India7]
gi|317011009|gb|ADU84756.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
SouthAfrica7]
gi|317012604|gb|ADU83212.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
Lithuania75]
gi|317178846|dbj|BAJ56634.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
F30]
Length = 195
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 155/195 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 181 KEYGLIDKVLQKNVK 195
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
Length = 195
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 104/190 (54%), Positives = 144/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E TNRGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIETTNRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDT+Q IKP + T C+G AASMGS LL+AG KG RFALPNA +
Sbjct: 61 YLYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A I+K + +LN I + G+ E ++K DRD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEA 180
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 181 KEYGLIDHVM 190
>gi|152986423|ref|YP_001348854.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PA7]
gi|150961581|gb|ABR83606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
aeruginosa PA7]
Length = 213
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 121/194 (62%), Positives = 155/194 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKERI+F+ GQ+ED+MA L+ AQLLFLEAENP+K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPEKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ IK RLN++ + G+ + + + DRD MS EA
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIKERLNQVLAHHTGQPLDVIARDTDRDRFMSGDEAV 197
Query: 197 DWGVVDKVLMSRID 210
+G++DKV+ R
Sbjct: 198 KYGLIDKVMTQRDQ 211
>gi|299821953|ref|ZP_07053841.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM
20601]
gi|299817618|gb|EFI84854.1| ATP-dependent Clp protease proteolytic subunit [Listeria grayi DSM
20601]
Length = 203
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 103/200 (51%), Positives = 149/200 (74%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
++ + L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL++++P
Sbjct: 4 NITMNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLDSQDPD 63
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG ++AGMAIYDTM +K + T MG AASMGS LL+AG G RFALPN
Sbjct: 64 KDIYLYINSPGGSISAGMAIYDTMNLVKADVQTIGMGMAASMGSFLLAAGADGKRFALPN 123
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+ I++HQP GG GQA++IE A+ I+KIK R+N I + G+ E + + DRD+ M+A
Sbjct: 124 SEIMIHQPLGGAQGQATEIEIAARHILKIKERMNRILSEKTGQPIEVIARDTDRDNFMTA 183
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA ++G++D ++ S+ ++
Sbjct: 184 DEAKEYGLIDDIISSKNALK 203
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 107/189 (56%), Positives = 150/189 (79%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E T+RGER+YD+YSRLLK+RI+ + + D +A +I AQLLFLE+E+P K I+LY
Sbjct: 3 VPFVIETTHRGERAYDLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG+LLL AG KG R+ALPN+RI++H
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DI+ A++I++++ +N + VK+ G T E +EK +RD+ MSA +A +
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQY 182
Query: 199 GVVDKVLMS 207
G++D+V+
Sbjct: 183 GLIDEVVEK 191
>gi|18203597|sp|Q9X5N0|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus
xanthus]
Length = 206
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 118/205 (57%), Positives = 163/205 (79%), Gaps = 4/205 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
F+ VP V+EQT+RGERSYDI SRLLK+RIV + +I+D +A +I AQLLFLE+E+P K+
Sbjct: 3 FMP-VPYVIEQTHRGERSYDIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDPDKD 61
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG++LL AG KG R+ALP++R
Sbjct: 62 INLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALPSSR 121
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K +LNE+ VK+ G++ E VEK DRD+ M ASE
Sbjct: 122 IMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMGASE 181
Query: 195 ACDWGVVDKVLMSRIDI---EEKSK 216
A +G++D++ R + +E+ K
Sbjct: 182 AKAYGIIDEIQNPRKVVGLGKEEKK 206
>gi|317153552|ref|YP_004121600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
gi|316943803|gb|ADU62854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
aespoeensis Aspo-2]
Length = 202
Score = 231 bits (589), Expect = 5e-59, Method: Composition-based stats.
Identities = 115/201 (57%), Positives = 161/201 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMV+E T R ER+YDIYSRLLK+RI+ ++ I+DH+A+LICAQLLFLE+E+P+KEI
Sbjct: 1 MVAIPMVIETTGRTERAYDIYSRLLKDRIILLSSAIDDHVASLICAQLLFLESEDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVV+AGMAIYDTMQ+I P+ST C+GQAASMG+LLL+AG +GMR+ALP++RI
Sbjct: 61 YMYINSPGGVVSAGMAIYDTMQYISAPVSTLCLGQAASMGALLLAAGAQGMRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI HA++I++++ LN I + G+ +++ +RD+ MS+ EA
Sbjct: 121 MIHQPLGGTQGQASDIHIHAKEILRLRDELNGILAGHTGQKLDKIRDDTERDYFMSSEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G++DKV+ SR D +E K
Sbjct: 181 VKYGLIDKVMHSRADAQEGRK 201
>gi|311248480|ref|XP_003123161.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Sus scrofa]
Length = 259
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 114/198 (57%), Positives = 156/198 (78%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 49 SRALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 108
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGGVVT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 109 KPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGTPGMRHSLPN 168
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS
Sbjct: 169 SRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIYAKHTKQSLQVIESAMERDRYMSP 228
Query: 193 SEACDWGVVDKVLMSRID 210
EA ++G++DKVL+
Sbjct: 229 MEAQEFGILDKVLVHPPQ 246
>gi|289435727|ref|YP_003465599.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
gi|289171971|emb|CBH28517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri serovar 1/2b str. SLCC3954]
Length = 198
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMADKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D++++++ ++
Sbjct: 181 KDYGLIDEIIVNKAGLK 197
>gi|222087754|ref|YP_002546291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
gi|221725202|gb|ACM28358.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
Length = 214
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 157/201 (78%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAE
Sbjct: 6 SPMSEAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAE 65
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N +K ISLYINSPGGVVT+G+A+YDTM++I+ P+ T CMG A SMGS LL AG+ G R A
Sbjct: 66 NSRKPISLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGQAGERSA 125
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+ I +HQP GGF GQASD+ HA ++ + K R+ +Y ++CG+TYEE E+ +DRDH
Sbjct: 126 LPNSSIHIHQPLGGFQGQASDMLIHAAEMERTKHRMTRLYAEHCGRTYEEFERAMDRDHF 185
Query: 190 MSASEACDWGVVDKVLMSRID 210
M+A +A +WG++D++L R +
Sbjct: 186 MTAEQALEWGLIDRILQVREE 206
>gi|56551844|ref|YP_162683.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis ZM4]
gi|241761834|ref|ZP_04759920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|260752594|ref|YP_003225487.1| ATP-dependent Clp protease proteolytic subunit [Zymomonas mobilis
subsp. mobilis NCIMB 11163]
gi|67460187|sp|Q5NNY8|CLPP_ZYMMO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56543418|gb|AAV89572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ZM4]
gi|241373748|gb|EER63308.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|258551957|gb|ACV74903.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
Length = 210
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 167/210 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D D+ L+PMVVEQ+NRGERS+DIYSRLL+ERI+FVTGQ+EDHMA++ICAQLLFL
Sbjct: 1 MSHDHADIVNALIPMVVEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASVICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP+K+I LYINSPGGVVTAG+AI+DTMQ+I+P + T C+GQAASMGS LL+AGE GM
Sbjct: 61 EAENPKKDIFLYINSPGGVVTAGLAIHDTMQYIRPKVGTLCIGQAASMGSFLLAAGEPGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R A N+RI++HQPSGG G A+DIE A++I+++++RLN +Y K + EE+EK +DR
Sbjct: 121 RVATTNSRIMIHQPSGGAQGMAADIEIQAREILRMRKRLNALYAKYTNQPIEEIEKAMDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D+ + A EA +G++DKV R E+ +
Sbjct: 181 DNFLEADEAKAFGLIDKVFDKRPVASEEKE 210
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 102/191 (53%), Positives = 142/191 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP VVEQ+ RGER++DIYSRLL+ERI+F+ I D ++ + AQLLFLEAE+P K+I
Sbjct: 23 SAVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDIQ 82
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ I P + T C G AASMG+ LLS G KG R ALPN+RI+
Sbjct: 83 IYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIM 142
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +IE A++I+ +K+ LN + K+ ++ E++ + +RD+ +S EA
Sbjct: 143 IHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEAV 202
Query: 197 DWGVVDKVLMS 207
++G++DKV+ +
Sbjct: 203 EYGLIDKVIKN 213
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
Length = 201
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 107/194 (55%), Positives = 148/194 (76%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
++ VPMVVE + ER+YDIYSRLLK+RIVF+ I+DH+A L+ AQLLFLEAE+P
Sbjct: 3 EIINQYVPMVVESNGKYERAYDIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPD 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V+AG+AIYDTMQ+IK ++T C+GQAASMG++LL+ G KG RF+LPN
Sbjct: 63 KDIQLYINSPGGSVSAGLAIYDTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPN 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG G A D+E +++++IK ++NEI + G+ E +EK DRD M+
Sbjct: 123 SRIMIHQPLGGAEGPAKDVEIMTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTP 182
Query: 193 SEACDWGVVDKVLM 206
EA ++G++DKV+
Sbjct: 183 EEALEYGLIDKVIK 196
>gi|282856773|ref|ZP_06266034.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
gi|282585396|gb|EFB90703.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pyramidobacter piscolens W5455]
Length = 192
Score = 231 bits (589), Expect = 6e-59, Method: Composition-based stats.
Identities = 112/191 (58%), Positives = 147/191 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+EQT RGERSYDIYSRLLK+RIVF+ +I D +A + AQLLFLE+E+P+++IS+
Sbjct: 2 YIPFVIEQTGRGERSYDIYSRLLKDRIVFLGDEINDDVANAVVAQLLFLESESPERDISI 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AIYDTMQF+K +ST +G AASM ++LLSAG G R ALPN+RI++
Sbjct: 62 YINSPGGSVSAGLAIYDTMQFVKCDVSTIVVGMAASMAAVLLSAGSAGKRIALPNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K LN I VK+ G++ +V+ DRD M+A EA
Sbjct: 122 HQPLGGAQGQASDIEIQAREIIKTKETLNNILVKHTGQSMRKVKGDTDRDFYMTAQEALA 181
Query: 198 WGVVDKVLMSR 208
+G+VDKV+ R
Sbjct: 182 YGIVDKVIDKR 192
>gi|163847092|ref|YP_001635136.1| endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222524926|ref|YP_002569397.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl]
gi|163668381|gb|ABY34747.1| Endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222448805|gb|ACM53071.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl]
Length = 221
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 94/196 (47%), Positives = 143/196 (72%), Gaps = 1/196 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMVVE T+RGER++DIYSRLLKERIV + I+D +A LI AQLLFLE+E+P ++I L
Sbjct: 27 LIPMVVESTSRGERAFDIYSRLLKERIVILGTPIDDQIANLIVAQLLFLESEDPDRDIWL 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTM I+P ++T C+G A SM + +L+ G KG R++LP++ I +
Sbjct: 87 YINSPGGSVTAGLGIYDTMHHIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIHM 146
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
H GG G A D+E A++++++++ + E+ K+ G+ E + K DRD M+ +A +
Sbjct: 147 HPAGGGARGYAPDVEIMARELLRLQQLVRELLAKDTGQPIERIAKDFDRDLFMTPEQAKE 206
Query: 198 WGVVDKVLMSRIDIEE 213
+G++D++L R D+++
Sbjct: 207 YGIIDEILT-REDVKK 221
>gi|193212075|ref|YP_001998028.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
gi|193085552|gb|ACF10828.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobaculum
parvum NCIB 8327]
Length = 225
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 150/201 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 NSINNQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLIMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +Y+NSPGG V+AG+ IYDTMQ+I+P IST C+G AASMG+ LL++G G R +LP
Sbjct: 82 ERDIYIYVNSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTAGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI+ L ++ K+ G+ + + + +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQETDILIQAREIEKIRHLLEDLLAKHTGQNVKTIREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIE 212
A+EA ++G++D++ R E
Sbjct: 202 ATEAKEYGLIDQIFEKRPAPE 222
>gi|163940539|ref|YP_001645423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|163862736|gb|ABY43795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
Length = 193
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 141/193 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MSVIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I + G+ E+V +RD+ M+A EA
Sbjct: 121 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIAERTGQPVEKVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDAVIEKK 193
>gi|298369365|ref|ZP_06980683.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria sp.
oral taxon 014 str. F0314]
gi|298283368|gb|EFI24855.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neisseria sp.
oral taxon 014 str. F0314]
Length = 206
Score = 231 bits (588), Expect = 6e-59, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 158/197 (80%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERIVF+ G ++D A L+ AQLLFLE+ENP K+I
Sbjct: 9 LVPTVIEQSGRGERAFDIYSRLLKERIVFLVGPVDDQSANLVVAQLLFLESENPDKDIFF 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGM+IYDTM FIKP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++
Sbjct: 69 YINSPGGSVSAGMSIYDTMNFIKPNVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMI 128
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP SGQASDIE HA++++K+K +LN + K+CG+ ++E+ DRD+ MSA EA
Sbjct: 129 HQPLISGGLSGQASDIEIHAKELLKLKEKLNRLLAKHCGRDLADLERDTDRDNYMSAEEA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
++G+VD+VL +R ++
Sbjct: 189 KEYGLVDQVLENRASMQ 205
>gi|262369923|ref|ZP_06063250.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
johnsonii SH046]
gi|262314962|gb|EEY96002.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
johnsonii SH046]
Length = 201
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 159/194 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVPMVVEQ++RGERS+DIYSRLL+ER++F+TG++ED+MA LI AQ+LFLEAENP K+I
Sbjct: 8 NALVPMVVEQSSRGERSFDIYSRLLRERVIFMTGEVEDNMANLIVAQMLFLEAENPDKDI 67
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASMG+ LL++G KG R+ L NAR+
Sbjct: 68 HLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASMGAFLLNSGAKGKRYCLENARV 127
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQASDIE HA++I+ IK RLN + ++ G+ YE V + DRD+ M+A A
Sbjct: 128 MIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSGQDYETVARDTDRDNFMTAQAA 187
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 188 KEYGLVDEVLSKRP 201
>gi|260821306|ref|XP_002605974.1| hypothetical protein BRAFLDRAFT_92198 [Branchiostoma floridae]
gi|229291311|gb|EEN61984.1| hypothetical protein BRAFLDRAFT_92198 [Branchiostoma floridae]
Length = 236
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 110/201 (54%), Positives = 153/201 (76%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ S +VP+VVEQT RGER+YDIYSRLLKERI+ V G I D M++L+ AQLLFL++
Sbjct: 25 QSSAQTLRPMVPIVVEQTGRGERAYDIYSRLLKERIICVMGPISDEMSSLVVAQLLFLQS 84
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+ +K + +YINSPGG VTAG+ IYDTMQ+I PP++T+C+GQA SM SLLL+AG G R
Sbjct: 85 ESNKKPVHMYINSPGGSVTAGLGIYDTMQYILPPVNTWCVGQACSMASLLLAAGTPGCRH 144
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPN+RI++HQP G +GQASDI A++I K+K+++N++YVK+ G+ +E+++DRD
Sbjct: 145 SLPNSRIMVHQPHGQAAGQASDILIQAEEISKLKQQMNKLYVKHTGQELSVIEESMDRDR 204
Query: 189 IMSASEACDWGVVDKVLMSRI 209
MS EA +G++DKVL
Sbjct: 205 FMSPVEAEAFGLIDKVLEHPP 225
>gi|254423153|ref|ZP_05036871.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196190642|gb|EDX85606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 201
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 144/190 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL+ERI+F+ GQ+ LI AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRERIIFLHGQVTADSMNLIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ +YDTM I+P ++T CMG AASMG+ LLSAG KG R LPN R+++
Sbjct: 61 YINSPGGSVSAGLGLYDTMNHIRPDVATICMGLAASMGAFLLSAGAKGKRMILPNGRVMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQA+DIE A++I+ +K LNE K+ G+ E++++ +RD MS EA +
Sbjct: 121 HQPSGGAQGQATDIEIQAKEILYLKTMLNEALAKHTGQPLEKIKEDTERDFFMSPQEAME 180
Query: 198 WGVVDKVLMS 207
+G+VD+V+
Sbjct: 181 YGLVDQVIDR 190
>gi|293349601|ref|XP_001055676.2| PREDICTED: caseinolytic peptidase, ATP-dependent, proteolytic
subunit-like [Rattus norvegicus]
gi|293362033|ref|XP_217313.4| PREDICTED: caseinolytic peptidase, ATP-dependent, proteolytic
subunit-like [Rattus norvegicus]
gi|149028159|gb|EDL83597.1| similar to Putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor (Endopeptidase Clp) [Rattus
norvegicus]
Length = 333
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 116/199 (58%), Positives = 156/199 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +K I
Sbjct: 114 PLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIH 173
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN+RI+
Sbjct: 174 MYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIM 233
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K+KR+L IY K+ ++ + +E ++RD MS EA
Sbjct: 234 IHQPSGGARGQATDIAIQAEEIMKLKRQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQ 293
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++DKVL+ E
Sbjct: 294 EFGILDKVLVHPPQDGEDE 312
>gi|74188717|dbj|BAE28093.1| unnamed protein product [Mus musculus]
Length = 269
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 115/199 (57%), Positives = 156/199 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +K I
Sbjct: 50 PLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIH 109
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN+RI+
Sbjct: 110 MYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIM 169
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS EA
Sbjct: 170 IHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQ 229
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++DKVL+ E
Sbjct: 230 EFGILDKVLVHPPQDGEDE 248
>gi|8393156|ref|NP_059089.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial precursor [Mus musculus]
gi|5921799|sp|O88696|CLPP_MOUSE RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit, mitochondrial; AltName: Full=Endopeptidase Clp;
Flags: Precursor
gi|3559935|emb|CAA06443.1| ClpP protease [Mus musculus]
gi|4454289|emb|CAA09966.1| ClpP protease [Mus musculus]
gi|12805083|gb|AAH01998.1| Caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
gi|12835038|dbj|BAB23132.1| unnamed protein product [Mus musculus]
gi|74207567|dbj|BAE40033.1| unnamed protein product [Mus musculus]
gi|74217075|dbj|BAE26636.1| unnamed protein product [Mus musculus]
gi|148706268|gb|EDL38215.1| caseinolytic peptidase, ATP-dependent, proteolytic subunit homolog
(E. coli) [Mus musculus]
Length = 272
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 115/199 (57%), Positives = 156/199 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +K I
Sbjct: 53 PLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNKKPIH 112
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN+RI+
Sbjct: 113 MYINSPGGVVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIM 172
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI A++I+K+K++L IY K+ ++ + +E ++RD MS EA
Sbjct: 173 IHQPSGGARGQATDIAIQAEEIMKLKKQLYNIYAKHTKQSLQVIESAMERDRYMSPMEAQ 232
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++DKVL+ E
Sbjct: 233 EFGILDKVLVHPPQDGEDE 251
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 107/189 (56%), Positives = 147/189 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VPMVVE T R ER+YDIYSRLLK+RIVF+ I+DH+A LI AQLLFLEAE+P K+I L
Sbjct: 8 YVPMVVENTGRYERAYDIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQL 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AIYDTMQ++K ++T C+GQAASMG++LL+ G KG RF+LPN+RI++
Sbjct: 68 YINSPGGSVSAGLAIYDTMQYVKCDVTTICIGQAASMGAVLLAGGTKGKRFSLPNSRIMI 127
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G A D+E +++++IK ++NEI + G+ E +E+ DRD M+ +A +
Sbjct: 128 HQPLGGAEGPAKDVEIMTKELLRIKNKINEILSLHTGQPIERIERDTDRDFFMTPEDALE 187
Query: 198 WGVVDKVLM 206
+G++DKV+
Sbjct: 188 YGLIDKVIK 196
>gi|13470920|ref|NP_102489.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Mesorhizobium loti MAFF303099]
gi|18202652|sp|Q98M38|CLPP1_RHILO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|14021663|dbj|BAB48275.1| ATP-dependent protease proteolytic subunit ClpP-like protein
[Mesorhizobium loti MAFF303099]
Length = 201
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 127/199 (63%), Positives = 159/199 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
LVPMV+EQ++RGER++DI+SRLL+ERI+F+ G+I D ++ L+CAQLL LE++NP
Sbjct: 1 MSGLASLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDDVSALVCAQLLSLESDNP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
KEISLYINSPGGVVT+G AIYDTMQ++ P+ST CMG AASMGS LL AG G R ALP
Sbjct: 61 DKEISLYINSPGGVVTSGFAIYDTMQYVSCPVSTVCMGFAASMGSFLLMAGTPGRRIALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA ILLHQP GGF GQASDI+RHA+ I K K+R+ E+Y ++CG++YEEVE+TLDRDH M+
Sbjct: 121 NATILLHQPLGGFQGQASDIQRHAERIGKTKQRMAELYAQHCGRSYEEVERTLDRDHFMT 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA WG+VD V +R
Sbjct: 181 AREAQTWGIVDHVFDTRKK 199
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 200
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 97/190 (51%), Positives = 140/190 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ ++ D + LI AQLLFLEAE+P+++I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V++G+ I+DTM I+P + T C G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSSGLGIFDTMNKIQPDVCTVCTGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN + G+ ++ + +RD MSA EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKSLLNNHLADHTGQPLSKIAEDTERDFFMSAEEAKN 180
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 181 YGLIDQVISR 190
>gi|147797194|emb|CAN64666.1| hypothetical protein VITISV_024612 [Vitis vinifera]
Length = 221
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 152/193 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERIV + G I D A ++ AQLLFLE+ENP K I
Sbjct: 9 ALIPMVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIH 68
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V+AG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG KG R ALPNA I+
Sbjct: 69 MYLNSPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIM 128
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG+SGQA D+ H + I+++ LN +Y K+ G++ + ++K +DRD+ M+ EA
Sbjct: 129 IHQPSGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAK 188
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 189 EFGIIDEVIDQRP 201
>gi|148238406|ref|YP_001223793.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
gi|147846945|emb|CAK22496.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 229
Score = 231 bits (588), Expect = 7e-59, Method: Composition-based stats.
Identities = 102/191 (53%), Positives = 146/191 (76%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I
Sbjct: 29 GVLPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQ 88
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI+
Sbjct: 89 VYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIM 148
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ +++ + DRD+ MS ++A
Sbjct: 149 IHQPMGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLDKIAEDTDRDNFMSPAQAV 208
Query: 197 DWGVVDKVLMS 207
D+G++D+V+ S
Sbjct: 209 DYGLIDRVVDS 219
>gi|254421271|ref|ZP_05034989.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
gi|196188760|gb|EDX83724.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. PCC 7335]
Length = 269
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 107/191 (56%), Positives = 146/191 (76%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++PMVVEQ+ RGER++DIYSRLL+ERIVF+ + D +A I AQLLFL+AE+P+K++
Sbjct: 67 SMLPMVVEQSGRGERAFDIYSRLLRERIVFLGTPVMDDIADSIVAQLLFLDAEDPEKDVQ 126
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ I+P + T C G AASMG+ LLS G KG R +LP+ARI+
Sbjct: 127 LYINSPGGSVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMSLPSARIM 186
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ++DIE A++I+ +K+RLNE+ + G+ +E +RD MSA EA
Sbjct: 187 IHQPSGGAQGQSADIEIQAREILYLKKRLNEMLADHTGQDISRIEADTERDFFMSAEEAK 246
Query: 197 DWGVVDKVLMS 207
++G++D+V+
Sbjct: 247 EYGLIDQVVSR 257
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 145/192 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RGERS+DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+KEI +Y
Sbjct: 1 MPTVVEQSGRGERSFDIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQIY 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALP+ARI++H
Sbjct: 61 INSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMIH 120
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE AQ+I+ +K LN + ++ G+ E++ + DRD+ +S +EA ++
Sbjct: 121 QPLGGAQGQAVDIEIQAQEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVEY 180
Query: 199 GVVDKVLMSRID 210
G++D+V+ S D
Sbjct: 181 GLIDRVVDSSGD 192
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 104/200 (52%), Positives = 148/200 (74%), Gaps = 2/200 (1%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ +GER++DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+K+I
Sbjct: 36 GVLPTVVEQSGKGERAFDIYSRLLRERIIFLGTGIDDAVADALVAQLLFLEAEDPEKDIQ 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALP+ARI+
Sbjct: 96 IYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ E++ + DRD+ +S +EA
Sbjct: 156 IHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAV 215
Query: 197 DWGVVDKVL--MSRIDIEEK 214
D+G++D+V+ +R +
Sbjct: 216 DYGLIDRVVNETTRTAVASS 235
>gi|185177785|pdb|2ZL3|A Chain A, Crystal Structure Of H.Pylori Clpp S99a
gi|185177786|pdb|2ZL3|B Chain B, Crystal Structure Of H.Pylori Clpp S99a
gi|185177787|pdb|2ZL3|C Chain C, Crystal Structure Of H.Pylori Clpp S99a
gi|185177788|pdb|2ZL3|D Chain D, Crystal Structure Of H.Pylori Clpp S99a
gi|185177789|pdb|2ZL3|E Chain E, Crystal Structure Of H.Pylori Clpp S99a
gi|185177790|pdb|2ZL3|F Chain F, Crystal Structure Of H.Pylori Clpp S99a
gi|185177791|pdb|2ZL3|G Chain G, Crystal Structure Of H.Pylori Clpp S99a
gi|185177792|pdb|2ZL3|H Chain H, Crystal Structure Of H.Pylori Clpp S99a
gi|185177793|pdb|2ZL3|I Chain I, Crystal Structure Of H.Pylori Clpp S99a
gi|185177794|pdb|2ZL3|J Chain J, Crystal Structure Of H.Pylori Clpp S99a
gi|185177795|pdb|2ZL3|K Chain K, Crystal Structure Of H.Pylori Clpp S99a
gi|185177796|pdb|2ZL3|L Chain L, Crystal Structure Of H.Pylori Clpp S99a
gi|185177797|pdb|2ZL3|M Chain M, Crystal Structure Of H.Pylori Clpp S99a
gi|185177798|pdb|2ZL3|N Chain N, Crystal Structure Of H.Pylori Clpp S99a
gi|185177799|pdb|2ZL4|A Chain A, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177801|pdb|2ZL4|B Chain B, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177803|pdb|2ZL4|C Chain C, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177805|pdb|2ZL4|D Chain D, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177807|pdb|2ZL4|E Chain E, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177809|pdb|2ZL4|F Chain F, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177811|pdb|2ZL4|G Chain G, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177813|pdb|2ZL4|H Chain H, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177815|pdb|2ZL4|I Chain I, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177817|pdb|2ZL4|J Chain J, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177819|pdb|2ZL4|K Chain K, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177821|pdb|2ZL4|L Chain L, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177823|pdb|2ZL4|M Chain M, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
gi|185177825|pdb|2ZL4|N Chain N, Crystal Structure Of H.Pylori Clpp S99a In Complex With
The Peptide Aaaa
Length = 196
Score = 231 bits (588), Expect = 8e-59, Method: Composition-based stats.
Identities = 112/196 (57%), Positives = 155/196 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+
Sbjct: 1 MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAA+MG+ LLS G KG RF+LP++R
Sbjct: 61 IGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAAAMGAFLLSCGAKGKRFSLPHSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKE 180
Query: 195 ACDWGVVDKVLMSRID 210
A ++G++DKVL +
Sbjct: 181 AKEYGLIDKVLQKNVK 196
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
Length = 193
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 151/193 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVE R ERSYDIYSRLLK+RI+F++G+I D +A L+ A++LFLE++N +K+I
Sbjct: 1 MPLIPMVVENEGRAERSYDIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM +IK +ST C+G AASMG+ LL+ GEKG R ALP++ I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMNYIKCDVSTICIGMAASMGAFLLACGEKGKRIALPSSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQ+SD+E HA+ ++K + +N+I K GKT + +EK DRD+ MSA EA
Sbjct: 121 MIHQPLGGFQGQSSDVEIHAKRLLKTREDINKILSKRTGKTLKTIEKDTDRDNFMSAKEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DKV+ R
Sbjct: 181 MEYGLIDKVIEKR 193
>gi|327438808|dbj|BAK15173.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
Length = 196
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 148/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A I AQLLFLEAE+P K+I
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIILLGSGIDDNVANSIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GMAIYDTM FIKP +ST C+G AASMG+ LLSAG KG R +LPNA +
Sbjct: 61 YLYINSPGGSITSGMAIYDTMNFIKPDVSTICIGMAASMGAFLLSAGAKGKRVSLPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++ +LN I +N G+ YE + + DRD+ MSA +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKRILHLREKLNRIMAENSGQDYETLARDTDRDNFMSAEQA 180
Query: 196 CDWGVVDKVLMS 207
++G++DK+
Sbjct: 181 LEYGLIDKIYER 192
>gi|153007825|ref|YP_001369040.1| ATP-dependent Clp protease proteolytic subunit [Ochrobactrum
anthropi ATCC 49188]
gi|151559713|gb|ABS13211.1| Endopeptidase Clp [Ochrobactrum anthropi ATCC 49188]
Length = 202
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 118/198 (59%), Positives = 157/198 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ LICAQLLFLEAEN
Sbjct: 1 MRETMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALICAQLLFLEAENS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++ I+LYINSPGGVVT+G+AIYDTM++++ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KQPINLYINSPGGVVTSGLAIYDTMRYVRAPVHTLCMGTARSMGSFLLMAGEPGHRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA +L+HQPSGGF GQASDI HA++ + KR + +Y ++CG+TYEEVE+ LDRD+ M+
Sbjct: 121 NANLLVHQPSGGFQGQASDIFIHAEEAQRTKRLMTRLYAEHCGRTYEEVERALDRDNFMT 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A +WG++D++L R
Sbjct: 181 AEAGLEWGLIDRILERRE 198
>gi|119476204|ref|ZP_01616556.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2143]
gi|119450831|gb|EAW32065.1| ATP-dependent Clp protease, proteolytic subunit ClpP [marine gamma
proteobacterium HTCC2143]
Length = 206
Score = 230 bits (587), Expect = 8e-59, Method: Composition-based stats.
Identities = 121/205 (59%), Positives = 160/205 (78%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E LGLVPMVVEQT +GERSYDIYSRLLKER++F+ GQ+ED+MA LI AQLLFLE
Sbjct: 1 MNNQEINNLGLVPMVVEQTAKGERSYDIYSRLLKERVIFMVGQVEDNMANLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP K+I LYINSPGG VTAG++IYDTMQFI+P +ST C+GQAASMG+ LL+ G KG R
Sbjct: 61 SENPDKDIHLYINSPGGSVTAGLSIYDTMQFIRPDVSTMCIGQAASMGAFLLAGGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPNAR ++HQPSGG GQA+DI+ A++I+ I+ RLN++ ++ G E + + +RD
Sbjct: 121 FILPNARTMIHQPSGGAQGQATDIDIQAREILIIRERLNQLMAEHTGNDVETIRRDTERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
+ M+A ++ +G+VD+VL R +E
Sbjct: 181 NFMNADDSKTYGLVDEVLRGRNSVE 205
>gi|307244056|ref|ZP_07526175.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
gi|306492580|gb|EFM64614.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Peptostreptococcus stomatis DSM 17678]
Length = 194
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 107/194 (55%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQ RGERSYDIYSRLLK+RI+F+ ++ D A+L+ AQLLFLEA++P K+I
Sbjct: 1 MALVPYVVEQDGRGERSYDIYSRLLKDRIIFLGDEVNDATASLVVAQLLFLEADDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYDTMQ+IKP +ST C+G AASMG+ LL+AG KG R+ALPN+ I
Sbjct: 61 HLYINSPGGSVTAGLAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRYALPNSTI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D+E H + ++ K +LN I + G+ Y+ V++ +RD+ M+A +
Sbjct: 121 MIHQPLGGSRGQATDVEIHTKFLLNTKEKLNTILSQRTGQPYDVVKENTERDNFMTADQG 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D V+ +R
Sbjct: 181 QAFGIIDHVIENRE 194
>gi|148244363|ref|YP_001219057.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Vesicomyosocius okutanii HA]
gi|166214721|sp|A5CXJ8|CLPP_VESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146326190|dbj|BAF61333.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Vesicomyosocius okutanii HA]
Length = 198
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 123/193 (63%), Positives = 158/193 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L +P+VVEQ+ RGER+YDIYSRLLKERI+F+ G IED+MA ++ AQLLFLE+ENP K+I
Sbjct: 6 LNQIPIVVEQSARGERAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESENPDKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQFIK IST C+GQAASMG+LLL+AG KG RFALPN R
Sbjct: 66 HLYINSPGGSVSAGLAIYDTMQFIKSDISTLCIGQAASMGALLLTAGTKGKRFALPNVRC 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGFSGQASD++ HAQ+I+K++ LN+I+ + G+ + ++K DRD+ MSA EA
Sbjct: 126 MIHQPLGGFSGQASDVDIHAQEILKVRANLNQIFKLHTGQVIKTIQKDTDRDNFMSADEA 185
Query: 196 CDWGVVDKVLMSR 208
+G++DKVL R
Sbjct: 186 TKYGLIDKVLAKR 198
>gi|66472380|ref|NP_001018520.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Danio rerio]
gi|63102525|gb|AAH95769.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog (E. coli) [Danio rerio]
Length = 266
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 119/201 (59%), Positives = 156/201 (77%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +A+L+ AQLLFL++E
Sbjct: 21 QSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSE 80
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K I +YINSPGGVVT+G AIYDTMQ+I PIST+C+GQAASMGSLLL+AG GMR +
Sbjct: 81 SNNKPIHMYINSPGGVVTSGPAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHS 140
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGG GQA+DI A++I+K+KR++N IY K+ G+ E +E ++RD
Sbjct: 141 LPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHTGQLLETIESVMERDRY 200
Query: 190 MSASEACDWGVVDKVLMSRID 210
MS EA D+G++DKVL+
Sbjct: 201 MSPMEAQDFGIIDKVLVHPPQ 221
>gi|254294162|ref|YP_003060185.1| endopeptidase Clp [Hirschia baltica ATCC 49814]
gi|254042693|gb|ACT59488.1| Endopeptidase Clp [Hirschia baltica ATCC 49814]
Length = 206
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 133/202 (65%), Positives = 171/202 (84%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + + LVPMVVEQ++RGER+YDI+SRLLKERI+FVTG IED MATLI AQLLFLE
Sbjct: 1 MHDPIETAMNLVPMVVEQSSRGERAYDIFSRLLKERIIFVTGPIEDGMATLITAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+KEIS+YINSPGGVV++G+AIYDTMQ+I P+ST C+G AASMGSLLL+AGEK MR
Sbjct: 61 SENPKKEISMYINSPGGVVSSGLAIYDTMQYISAPVSTACIGMAASMGSLLLAAGEKDMR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA PNARI++HQPSGG+ G ASDIERHA++I++IKR LN IYV + G++YE +E+ LDRD
Sbjct: 121 FATPNARIMVHQPSGGYRGVASDIERHAEEILEIKRNLNNIYVNHTGQSYEAIEQKLDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
M++++A ++G++D+V R
Sbjct: 181 SFMTSAQAVEFGIIDRVFEKRA 202
>gi|254779232|ref|YP_003057337.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
B38]
gi|254001143|emb|CAX29101.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Helicobacter pylori B38]
Length = 196
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 154/193 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+
Sbjct: 1 MMGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++R
Sbjct: 61 IGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA E
Sbjct: 121 IMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++DKVL
Sbjct: 181 AKEYGLIDKVLQK 193
>gi|112823618|gb|ABI25707.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
somnus 129PT]
Length = 188
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 122/188 (64%), Positives = 156/188 (82%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGERSYDIYSRLLKER++F+TG++ED MA LI AQLLFLEAE+P K+I++YIN
Sbjct: 1 MVVEQTSRGERSYDIYSRLLKERVIFLTGEVEDRMANLIVAQLLFLEAEDPAKDINIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+++HQP
Sbjct: 61 SPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPHARVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDI+ HAQ+I+KIK+ LNE + G++ E++E+ DRD+ MSA +A +G+
Sbjct: 121 LGGFRGQASDIQIHAQEILKIKQTLNERLAFHTGQSIEQIEQDTDRDNFMSAEQAKLYGL 180
Query: 201 VDKVLMSR 208
VD+VL+ R
Sbjct: 181 VDEVLIKR 188
>gi|113953857|ref|YP_729303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9311]
gi|113881208|gb|ABI46166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 229
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 102/189 (53%), Positives = 141/189 (74%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP VVEQ+ RGERS+DIYSRLL+ERI+F+ + D +A + AQLLFLEAE+P+K+I +Y
Sbjct: 31 VPTVVEQSGRGERSFDIYSRLLRERIIFLGTDVNDQVADALVAQLLFLEAEDPEKDIQVY 90
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 91 INSPGGSITAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIH 150
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE AQ+I+ +K LN + + G+ ++ + +RD+ +S +EA ++
Sbjct: 151 QPLGGAQGQAVDIEIMAQEILFLKETLNGLMADHTGQPLAKITEDTERDYFLSPAEAVEY 210
Query: 199 GVVDKVLMS 207
G++D+V+ +
Sbjct: 211 GLIDRVVDN 219
>gi|297566268|ref|YP_003685240.1| endopeptidase Clp [Meiothermus silvanus DSM 9946]
gi|296850717|gb|ADH63732.1| Endopeptidase Clp [Meiothermus silvanus DSM 9946]
Length = 196
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 103/195 (52%), Positives = 143/195 (73%), Gaps = 2/195 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP V+EQT RGER YDIYSRLLK+RI+F+ I+ +A I AQ+LFL+A+N Q++I L
Sbjct: 2 VVPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDAAVANTIVAQMLFLDAQNSQQDIRL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN PGG VTAG+AIYDTMQF++ P+ST C+G AAS G++LL+AG G R+ALP+A I++
Sbjct: 62 YINCPGGEVTAGLAIYDTMQFVRSPVSTICVGMAASFGAVLLAAGAPGKRYALPHANIMI 121
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQ SDI +++ K KR LNEI K+ G+ E+VE+ DRD+ MSA +A
Sbjct: 122 HQPWVSGGLGGQVSDIMIRVEELAKNKRLLNEILAKHTGQRVEKVERDTDRDYFMSAPQA 181
Query: 196 CDWGVVDKVLMSRID 210
++G++D+V+ +
Sbjct: 182 KEYGLIDQVVTHEAE 196
>gi|42520204|ref|NP_966119.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|60389690|sp|Q73I59|CLPP_WOLPM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|42409942|gb|AAS14053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila melanogaster]
Length = 208
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 122/197 (61%), Positives = 167/197 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQT+RGER+YDIYSRL+KERI+FVTG IED+MA++I AQLLFLE+ENP K+I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPNKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+I P +ST C+GQAASMGSLLL+AG KG R++LP++RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA +I+++K++LN+IY K+ G + +++E ++RD M EA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
G++D+V+ R DIE
Sbjct: 181 RKIGLIDRVIAERTDIE 197
>gi|325479715|gb|EGC82805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 197
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 117/191 (61%), Positives = 158/191 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQTNRGER+YDIYSRLLK+RI+F++G++ D ++ +I AQLLFLE+E+P K+I
Sbjct: 7 LVPTVVEQTNRGERAYDIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G+AIYDTM +IKP +ST C+GQAASM ++LLS+G KG RF+LP++ I++
Sbjct: 67 YINSPGGVVTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFSLPSSNIMI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI A+ I+KIK RLN+I N G++ +++EK DRD MSA+EA +
Sbjct: 127 HQPSGGAQGQASDIVIQAEQIIKIKERLNKILSDNTGQSLKKIEKDTDRDFAMSAAEALE 186
Query: 198 WGVVDKVLMSR 208
+G++DKV+ S+
Sbjct: 187 YGLIDKVIESK 197
>gi|269138347|ref|YP_003295047.1| protease subunit of ATP-dependent Clp protease [Edwardsiella tarda
EIB202]
gi|267984007|gb|ACY83836.1| protease subunit of ATP-dependent Clp protease [Edwardsiella tarda
EIB202]
gi|304558379|gb|ADM41043.1| ATP-dependent Clp protease proteolytic subunit [Edwardsiella tarda
FL6-60]
Length = 189
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 125/189 (66%), Positives = 157/189 (83%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAENP+K+I LYIN
Sbjct: 1 MVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAENPEKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMGS LL+AG +G RF LPN+R+++HQP
Sbjct: 61 SPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGSFLLAAGAQGKRFCLPNSRVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQA+DIE HA++I+ IK R+N + K+ G+ E +E+ +RD MSA +A ++G+
Sbjct: 121 LGGFQGQATDIEIHAKEILSIKARMNTLMAKHSGQPIEVIERDTERDRFMSAQDAVEYGL 180
Query: 201 VDKVLMSRI 209
VD VL R
Sbjct: 181 VDAVLTQRA 189
>gi|242015536|ref|XP_002428409.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
gi|212513021|gb|EEB15671.1| ATP-dependent Clp protease proteolytic subunit, putative [Pediculus
humanus corporis]
Length = 252
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 165/201 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+V+EQT RGER+YDIYSRLLKERI+ V GQI D +++++ AQLLFL++EN +K +
Sbjct: 39 VPLIPVVIEQTGRGERAYDIYSRLLKERIICVMGQIHDELSSVVIAQLLFLQSENSKKPV 98
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+ IYDTMQ+I PP++T+C+GQA SM SLLL+AG GMR ALPNARI
Sbjct: 99 HMYINSPGGSVTAGLGIYDTMQYILPPVATWCVGQACSMASLLLAAGASGMRHALPNARI 158
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+DI+ A++I+K+K+++N +YVK+ G + E++E++++RD M+ S+A
Sbjct: 159 MIHQPSGGVQGQATDIQIQAEEILKLKKQINHLYVKHTGLSIEKIEQSMERDKFMNPSDA 218
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++DK+L + EK++
Sbjct: 219 KEFGIIDKILNHPPKLGEKAE 239
>gi|67459164|ref|YP_246788.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
gi|75536404|sp|Q4ULF0|CLPP_RICFE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67004697|gb|AAY61623.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia felis
URRWXCal2]
Length = 201
Score = 230 bits (587), Expect = 9e-59, Method: Composition-based stats.
Identities = 125/201 (62%), Positives = 167/201 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHMA L+ AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLVVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ G+ + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYRGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G++D ++ SR + +K
Sbjct: 181 KKFGIIDNIISSRDAMTMSAK 201
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 142/189 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++PMVVEQ+ GER++D+YSRLL++RI+F+ I+D +A + AQ+LFLE+E+P+K+I
Sbjct: 33 GVIPMVVEQSGMGERAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM IYDTMQ I+P + T C G AASMG+ LL++G G R +LP++RI+
Sbjct: 93 LYINSPGGSVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ K LN + ++ G+ E + +RD MSA+EA
Sbjct: 153 IHQPLGGAQGQAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQ 212
Query: 197 DWGVVDKVL 205
++G++D+V+
Sbjct: 213 EYGLIDQVI 221
>gi|32266066|ref|NP_860098.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
hepaticus ATCC 51449]
gi|60389734|sp|Q7VIN7|CLPP_HELHP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|32262115|gb|AAP77164.1| endopeptidase ClpP [Helicobacter hepaticus ATCC 51449]
Length = 196
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 107/193 (55%), Positives = 148/193 (76%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P V+E+T RGERSYDIYSRLLK+RI+ ++G+I DH+A+ I AQLLFLEAE+P+K+
Sbjct: 1 MSSYIPYVIERTGRGERSYDIYSRLLKDRIILLSGEINDHIASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+ YINSPGGV+T+ +IYDTM +I IST C+GQAAS G+ LLS+G KG RF+LPN+R
Sbjct: 61 INFYINSPGGVITSAFSIYDTMNYIHSDISTICIGQAASAGAFLLSSGTKGKRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K+ LNEI N G+ E++ + +RD MS E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAREILRLKKILNEIMAHNTGQKIEKITQDTERDFFMSGEE 180
Query: 195 ACDWGVVDKVLMS 207
A +G+VD++L
Sbjct: 181 AKKYGLVDEILTK 193
>gi|220932330|ref|YP_002509238.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothermothrix orenii H 168]
gi|259585957|sp|B8CY74|CLPP_HALOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219993640|gb|ACL70243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Halothermothrix orenii H 168]
Length = 198
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 111/199 (55%), Positives = 164/199 (82%), Gaps = 1/199 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQTNRGERSYDIYSRLLK+RIVF+ I D ++ LI AQLLFLEAE+P K+I
Sbjct: 1 MSLIPVVVEQTNRGERSYDIYSRLLKDRIVFLGHPINDELSNLIIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTA +A+YDT+Q+IKP ++T CMGQAAS G+LLL++G KG R+ALPNAR+
Sbjct: 61 HLYINSPGGSVTAALAMYDTIQYIKPDVATICMGQAASAGALLLASGTKGKRYALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP+GG G+A++ E H +++++++ RLNEI K+ GK+ E++ K +++D+ M+A EA
Sbjct: 121 MIHQPAGGVQGKATEAEIHIKELLRLRERLNEILSKHTGKSVEQISKDVEQDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++D+V+ + ++++K
Sbjct: 181 LEYGIIDEVIT-KNELKDK 198
>gi|301622698|ref|XP_002940664.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Xenopus (Silurana) tropicalis]
Length = 247
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 115/203 (56%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
V LVP+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +++L+ AQLLFL++E+ +
Sbjct: 29 PVLSPLVPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSLVVAQLLFLQSESNK 88
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 89 KPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPN 148
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K+++NEIY K+ + +E ++RD MS
Sbjct: 149 SRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSP 208
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
+EA ++G++DKVL+ E
Sbjct: 209 TEAQEFGILDKVLVHPPQDGEDE 231
>gi|307293097|ref|ZP_07572943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingobium
chlorophenolicum L-1]
gi|306881163|gb|EFN12379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sphingobium
chlorophenolicum L-1]
Length = 211
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 127/210 (60%), Positives = 165/210 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVP+V+EQ+NRGERS+DIYSRLL+ERI+FVTGQ+EDHMA+LI AQLLFL
Sbjct: 1 MTDIMSDPMAALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+K+I +YINSPGGVVT+GMAI+DTM++I+P + T C+GQAASMGS LL+AGE G
Sbjct: 61 ESENPKKDIWMYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R AL NARI++HQPSGG G ASDIE A++I++I+ RLN +YV+ G+T EEVE+ +DR
Sbjct: 121 RIALSNARIMVHQPSGGAQGMASDIEIQAKEILRIRSRLNNLYVQYTGRTLEEVERAMDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D + A EA +G+VD+V R E ++
Sbjct: 181 DTFLEAEEAKAFGLVDEVFDRRPAAAETAE 210
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
fibrisolvens 16/4]
Length = 194
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 108/194 (55%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ +RGERSYDIYSRLLK+RIVF+ ++ + A+L AQLLFLE+E+P K+I
Sbjct: 1 MATIPYVIEQNSRGERSYDIYSRLLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G+KG RFALPNA +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGQKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A++I+K + +LN + N GK YE+V +RDH + A EA
Sbjct: 121 MIHQPLGGAKGQATEIEIAAKNILKTREKLNRMLAANTGKDYEQVCLDTERDHWLDAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+++ +
Sbjct: 181 LDYGLIDEIITKKN 194
>gi|227500202|ref|ZP_03930271.1| endopeptidase Clp [Anaerococcus tetradius ATCC 35098]
gi|227217724|gb|EEI83028.1| endopeptidase Clp [Anaerococcus tetradius ATCC 35098]
Length = 197
Score = 230 bits (587), Expect = 1e-58, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 156/191 (81%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQTNRGER+YDIYSRLLK+RI+F++G++ D ++ +I AQLLFLE+E+P K+I
Sbjct: 7 LVPTVVEQTNRGERAYDIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G+AIYDTM +IKP +ST C+GQAASM ++LLS+G KG R++LP++ I++
Sbjct: 67 YINSPGGVVTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRYSLPSSNIMI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI A+ I+KIK +LN+I N G++ +++EK DRD M+A EA
Sbjct: 127 HQPSGGAQGQASDIVIQAEQIIKIKEKLNKILSDNTGQSLKKIEKDTDRDFAMTAEEALK 186
Query: 198 WGVVDKVLMSR 208
+G++DKV+ S+
Sbjct: 187 YGLIDKVIESK 197
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 145/192 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I +Y
Sbjct: 26 LPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 86 INSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE A++I+ +K LN + ++ G+ +++ + DRD+ +S +EA ++
Sbjct: 146 QPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYFLSPAEAVEY 205
Query: 199 GVVDKVLMSRID 210
G++D+V+ S D
Sbjct: 206 GLIDRVVDSSGD 217
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 147/190 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQ+ RGER++DIYSRLL+ERI+F+ Q+++++A LI AQLL+L+AE+P+K+I +
Sbjct: 1 MIPIVIEQSGRGERAFDIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ K+RLN+ + G+ E + + +RD MS EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEARE 180
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 181 YGLIDQVIDR 190
>gi|315283588|ref|ZP_07871740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
gi|313612769|gb|EFR86759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
marthii FSL S4-120]
Length = 198
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIVNKSGLK 197
>gi|224438107|ref|ZP_03659042.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi CCUG 18818]
gi|313144547|ref|ZP_07806740.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi CCUG 18818]
gi|313129578|gb|EFR47195.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
cinaedi CCUG 18818]
Length = 196
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 151/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
G +P V+E+T RGERSYDIYSRLLK+RI+ ++G+I DH+A+ I AQLLFLEAE+P K+
Sbjct: 1 MSGYIPFVIERTGRGERSYDIYSRLLKDRIILLSGEINDHIASSIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+ YINSPGGV+T+ +IYDTM +I+ IST C+GQAAS G+ LLS+G KG RF+LPN+R
Sbjct: 61 INFYINSPGGVITSAFSIYDTMNYIRSDISTICIGQAASAGAFLLSSGTKGKRFSLPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K+ LNEI +N G++ E + + +RD MS E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAKEILRLKKILNEIMAENTGQSVENITQDTERDFFMSGEE 180
Query: 195 ACDWGVVDKVLMS 207
A D+G+VDK+L
Sbjct: 181 AKDYGLVDKILTK 193
>gi|56269518|gb|AAH87510.1| LOC496087 protein [Xenopus laevis]
Length = 243
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +++++ AQLLFL++E+ +
Sbjct: 25 PILSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESNK 84
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 85 KPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPN 144
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K+++NEIY K+ + +E ++RD MS
Sbjct: 145 SRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSP 204
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
+EA ++G++DKVL+ E
Sbjct: 205 TEAQEFGILDKVLVHPPQDGEDE 227
>gi|16801674|ref|NP_471942.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|20137847|sp|Q928C4|CLPP_LISIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16415149|emb|CAC97839.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|313622455|gb|EFR92900.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL J1-023]
Length = 198
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIVNKSGLK 197
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 112/197 (56%), Positives = 147/197 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T R ER+YDIYSRLLK+RIVF+ I+DH+A L+ AQLLFLEAE+P
Sbjct: 1 MKITDQLIPTVIESTGRYERAYDIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAG+AIYDTMQ+IK + T C+GQAASM ++LL++G KG RFALP
Sbjct: 61 DKDIQLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI+LHQP GG G D+E +++++IK +N I + G+ + +EK DRD MS
Sbjct: 121 NARIMLHQPLGGAEGPVKDVEIITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMS 180
Query: 192 ASEACDWGVVDKVLMSR 208
A EA D+G+VDKV+ S+
Sbjct: 181 AYEALDYGLVDKVIESK 197
>gi|254456794|ref|ZP_05070222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Campylobacterales bacterium GD 1]
gi|207085586|gb|EDZ62870.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Campylobacterales bacterium GD 1]
Length = 196
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 116/195 (59%), Positives = 159/195 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVE+T RGERSYDIYSRLLK+RI+ ++G++ D +A+ I AQ+LFLEAE+P+K+I
Sbjct: 1 MSYIPYVVEKTGRGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGVVTAGMAI+DTM +I+P I+T C+GQAASMG+ LLS+GEKG R+ALP+ARI
Sbjct: 61 YFYINSPGGVVTAGMAIFDTMNYIRPHITTICIGQAASMGAFLLSSGEKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A++I+++K LNEI KN G++ ++VEK DRD+ MSASEA
Sbjct: 121 MIHQPLGGAQGQATDIAIQAKEILRMKAELNEILAKNTGQSVKKVEKDTDRDNFMSASEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL+
Sbjct: 181 QEYGMIDEVLVKNDK 195
>gi|283955378|ref|ZP_06372877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 414]
gi|283793138|gb|EFC31908.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 414]
Length = 194
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 109/189 (57%), Positives = 149/189 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A+ I AQLLFLEAE+P K+I LY
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELASSIVAQLLFLEAEDPAKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G RFALPN+RI++H
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPNVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+++K LN+I KN + ++ K +RD MSA EA ++
Sbjct: 123 QPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|157164595|ref|YP_001465991.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
concisus 13826]
gi|112801723|gb|EAT99067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
concisus 13826]
Length = 196
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 114/193 (59%), Positives = 150/193 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+VVE+T+RGERSYDIYSRLLK+RIV ++G+IED MA I AQLLFLEAE+P K+
Sbjct: 1 MSYYVPVVVERTSRGERSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G G R+ALPN+R
Sbjct: 61 IYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LN I KN G+ ++ K +RD MS++E
Sbjct: 121 IMIHQPLGGARGQATDIEIQAREILRLKEILNGILAKNTGQKLSKIVKDTERDFFMSSAE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G+VDK+L
Sbjct: 181 AKEYGLVDKILEK 193
>gi|295105822|emb|CBL03365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gordonibacter
pamelaeae 7-10-1-b]
Length = 211
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 144/200 (72%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P V+EQ+ RGERSYDIYSRLL +R++F+ QI+D++A + AQLL LE+ +P+K+IS
Sbjct: 8 ALIPYVIEQSPRGERSYDIYSRLLNDRVIFLGEQIDDNVANSVVAQLLHLESADPEKDIS 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAG+AI DTM FIK +ST C+G+ ASM ++LLS G KG R LPN+ +L
Sbjct: 68 LYINSPGGSVTAGLAILDTMDFIKCDVSTICLGECASMAAVLLSNGAKGKRMCLPNSMVL 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ ++I A ++K + RLN+I N G+T E ++ +RD+ M+A EA
Sbjct: 128 IHQPSGGAQGQQTEIAIVADFMLKTRNRLNKILADNTGQTLETIQADTERDNYMTAEEAL 187
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
+G+VD++ SR + +
Sbjct: 188 AYGLVDRITTSRAAAADTEE 207
>gi|206896158|ref|YP_002247153.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
gi|206738775|gb|ACI17853.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 112/199 (56%), Positives = 155/199 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+EQT RGER YDIYSRLL++RIVF+ G+IE MA ++ AQLLFLEAE+P+++
Sbjct: 1 MSPLIPYVIEQTPRGERGYDIYSRLLRDRIVFINGEIEPEMAGVVIAQLLFLEAEDPKRD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG+VT G+AIYDTMQ+I+P + T C+GQAASM ++LL+AG KG RFALPN+R
Sbjct: 61 IYVYINSPGGIVTDGLAIYDTMQYIEPDVVTMCIGQAASMAAILLAAGTKGKRFALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
ILLHQP GG GQ +D+E A+++V+IK+R+NEI + G+ + + + DRD I++ E
Sbjct: 121 ILLHQPMGGVQGQVTDVEIQAKELVRIKQRINEILSVHTGQPIDRILQDTDRDFILTPDE 180
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A +GV+D+V+ RI E+
Sbjct: 181 AVQYGVIDQVITKRIRKED 199
>gi|326386907|ref|ZP_08208521.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208587|gb|EGD59390.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Novosphingobium nitrogenifigens DSM 19370]
Length = 231
Score = 230 bits (586), Expect = 1e-58, Method: Composition-based stats.
Identities = 127/200 (63%), Positives = 167/200 (83%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P+VVEQ++RGERS+DIYSRLL+ERI+FVTG+IEDHMA++I AQLLFLE+ENP K+IS
Sbjct: 22 ALIPVVVEQSSRGERSFDIYSRLLRERIIFVTGEIEDHMASVIVAQLLFLESENPSKDIS 81
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAGMAI+DTM++I+P +ST C+GQA SMGS LL+AGE G+R ALPNARI+
Sbjct: 82 MYINSPGGVVTAGMAIHDTMKYIRPRVSTVCIGQACSMGSFLLAAGEPGLRVALPNARIM 141
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASDIE A++I++I+ R+N++YVK G+ EE+E+ LDRD + A EA
Sbjct: 142 IHQPSGGARGMASDIEIQAREILRIRTRMNDLYVKYTGRQLEEIERALDRDTFLEADEAL 201
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
+G+VDKV SR ++ +
Sbjct: 202 AFGLVDKVFESRPASDQTGE 221
>gi|302382854|ref|YP_003818677.1| endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264]
gi|302193482|gb|ADL01054.1| Endopeptidase Clp [Brevundimonas subvibrioides ATCC 15264]
Length = 213
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 138/206 (66%), Positives = 164/206 (79%), Gaps = 1/206 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D D LVPMVVEQ++RGER++DI+SRLL+ERI+F+TG ED MA+LICAQLLFL
Sbjct: 1 MRDPIDYLQSNLVPMVVEQSSRGERAFDIFSRLLRERIIFLTGPFEDGMASLICAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGG VT+ +AIYDTMQ+IK P+ST MG AAS GSL+L+AG G
Sbjct: 61 ESENPKKEISMYINSPGGQVTSALAIYDTMQYIKSPVSTVVMGMAASAGSLILTAGAAGQ 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNARI++HQPSGGF GQASDIE HA DI KRRLNEIYV + G+TYEEVEKTLDR
Sbjct: 121 RIALPNARIMVHQPSGGFRGQASDIELHAADIRYTKRRLNEIYVHHTGRTYEEVEKTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
DH M A A +WG+VD V R +
Sbjct: 181 DHFMDAEAAKEWGIVDHVYDKRDQAD 206
>gi|257065888|ref|YP_003152144.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
gi|256797768|gb|ACV28423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerococcus
prevotii DSM 20548]
Length = 197
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 115/191 (60%), Positives = 158/191 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQTNRGER+YDIYSRLLK+RI+F++G++ D ++ +I AQLLFLE+E+P K+I
Sbjct: 7 LVPTVVEQTNRGERAYDIYSRLLKDRIIFLSGEVRDEISDIIIAQLLFLESEDPDKDIQF 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G+AIYDTM +IKP +ST C+GQAASM ++LLS+G KG R++LP++ I++
Sbjct: 67 YINSPGGVVTSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRYSLPSSNIMI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI A+ I+KIK RLN+I N G++ +++EK DRD M+A+EA +
Sbjct: 127 HQPSGGAQGQASDIVIQAEQIIKIKERLNKILSDNTGQSLKKIEKDTDRDFAMTAAEALE 186
Query: 198 WGVVDKVLMSR 208
+G++DKV+ S+
Sbjct: 187 YGLIDKVIESK 197
>gi|58696873|ref|ZP_00372388.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila simulans]
gi|58699505|ref|ZP_00374232.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila ananassae]
gi|225630255|ref|YP_002727046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia sp.
wRi]
gi|254763810|sp|C0R2W3|CLPP_WOLWR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58533978|gb|EAL58250.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58536916|gb|EAL60096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Drosophila simulans]
gi|225592236|gb|ACN95255.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia sp.
wRi]
Length = 208
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 122/197 (61%), Positives = 167/197 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQT+RGER+YDIYSRL+KERI+FVTG IED+MA++I AQLLFLE+ENP K+I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+I P +ST C+GQAASMGSLLL+AG KG R++LP++RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA +I+++K++LN+IY K+ G + +++E ++RD M EA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
G++D+V+ R DIE
Sbjct: 181 RKIGLIDRVIAERTDIE 197
>gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 196
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 137/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K++LN+ G+ +E DRD MS +EA +
Sbjct: 121 HQPLGGAQGQASDIRIQADEILYLKKKLNQELSDRTGQPLNRIEDDTDRDFFMSPAEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 YGLIDKVIDKRP 192
>gi|304407273|ref|ZP_07388926.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304343714|gb|EFM09555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 195
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 147/192 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VPMV+EQ NRGER+YDIYSRLLK+RI+F+ + D +A I AQLLFL A++P+K+I
Sbjct: 3 MNFVPMVIEQNNRGERAYDIYSRLLKDRIIFLGTGVNDIVANSIIAQLLFLAADDPEKDI 62
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +TAGMAIYDTMQFIKP +ST C+G AASMG+ LL+AG G R+ALPN+ +
Sbjct: 63 SLYINSPGGSITAGMAIYDTMQFIKPDVSTICVGMAASMGAFLLTAGAIGKRYALPNSEV 122
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A+ I+K++ +LN I + + E +EK DRD+ MSA EA
Sbjct: 123 MIHQPLGGAEGQASDIEIRAKRILKMRDKLNGILAERSNQPLERIEKDTDRDYFMSAEEA 182
Query: 196 CDWGVVDKVLMS 207
+G++DKV+
Sbjct: 183 RQYGLIDKVIDK 194
>gi|296273946|ref|YP_003656577.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arcobacter
nitrofigilis DSM 7299]
gi|296098120|gb|ADG94070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arcobacter
nitrofigilis DSM 7299]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 107/192 (55%), Positives = 154/192 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVE++ RGERSYDIYSRLLK+RI+ ++G+I D +A+ I AQLLFLEAE+P K+I
Sbjct: 1 MSYIPYVVEKSGRGERSYDIYSRLLKDRIIMLSGEINDPVASTIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+GM+IYDTM +IKP + T C+GQAASMG+ LLS+G KG R++LPN+R+
Sbjct: 61 YLYINSPGGVITSGMSIYDTMNYIKPDVCTICIGQAASMGAFLLSSGVKGKRYSLPNSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ++DI+ A++I ++K LN++ + G+ + +EK DRD+ MSA EA
Sbjct: 121 MIHQPSGGAQGQSTDIQIQAKEIQRMKDTLNKMIAEQTGQPIKVIEKDTDRDNFMSAEEA 180
Query: 196 CDWGVVDKVLMS 207
C +G++D+V+ +
Sbjct: 181 CKYGLIDEVITN 192
>gi|297621812|ref|YP_003709949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
gi|297377113|gb|ADI38943.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Waddlia
chondrophila WSU 86-1044]
Length = 215
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 98/199 (49%), Positives = 151/199 (75%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
L P V+E T RGERS DI+SRLLK+RIVF+ I+DH+A ++ AQLLFL E+
Sbjct: 12 PFPELSSLTPYVIEDTGRGERSMDIFSRLLKDRIVFIGQDIDDHVANIVVAQLLFLRMED 71
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+K++++Y+NS GG +T+G+AIYD ++++ P+ST+C+GQA+SMG+LLL+AG+KG R+AL
Sbjct: 72 PKKDVNIYVNSRGGYITSGLAIYDVLKWLPCPVSTYCIGQASSMGALLLTAGDKGKRYAL 131
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+RI++HQPSGG G ++DI A++I+ +K+R+NEI + G+T E++ K L+RD M
Sbjct: 132 PNSRIMIHQPSGGVGGTSADIALQAKEILFLKKRMNEILAECTGQTEEKIAKDLERDLFM 191
Query: 191 SASEACDWGVVDKVLMSRI 209
S EA ++G++D ++ +
Sbjct: 192 SPEEAKEYGLIDNIIEKKT 210
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 111/206 (53%), Positives = 162/206 (78%), Gaps = 5/206 (2%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
F+ +P V+EQT+RGERSYDIYSRLLK+RIV + +I+D ++ I +QLLFLE+E+P K+
Sbjct: 3 FMP-IPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKD 61
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG++LL AG KG R++LP++R
Sbjct: 62 INLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSR 121
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I++++ +LN++ VK+ G+ E VEK DRD+ M A+E
Sbjct: 122 IMIHQPLGGVRGQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATE 181
Query: 195 ACDWGVVDKVLMSRIDI----EEKSK 216
+ +G++D++ R + +EK +
Sbjct: 182 SKAYGIIDEIQNPRKPVAAPKDEKKQ 207
>gi|304405398|ref|ZP_07387057.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
gi|304345437|gb|EFM11272.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
curdlanolyticus YK9]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 139/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+VP VVEQTNRGERSYDIYSRLLK+RIVF+ I+D +A +I AQLLFL AE+P K+
Sbjct: 1 MSSIVPYVVEQTNRGERSYDIYSRLLKDRIVFLGSAIDDQVANVITAQLLFLAAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG +AG AI DTM +IKP + T C G AAS ++LL +G KG R+ALPN+
Sbjct: 61 IHFYINSPGGSTSAGFAILDTMHYIKPDVQTICAGMAASFAAILLLSGTKGKRYALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQASDI A+ I+ I+ +LN I V+ G+ E VE+ +DRD MSA E
Sbjct: 121 VMIHQPHGGAQGQASDIAITAKRIIGIREKLNRITVERTGQPLERVEQDMDRDTYMSAEE 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D+++
Sbjct: 181 ALQYGIIDQIIKK 193
>gi|303328063|ref|ZP_07358502.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. 3_1_syn3]
gi|302861889|gb|EFL84824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. 3_1_syn3]
Length = 202
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 118/202 (58%), Positives = 167/202 (82%), Gaps = 1/202 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+E T R ER+YDIYSRLLK+RIV + ++ D +A+LICAQLLFLE+++P+KEI
Sbjct: 1 MSLVPMVIETTGRSERAYDIYSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAG+AIYDTM++I P++T CMG+AASMG+ LL+AGE GMRFALPN++I
Sbjct: 61 NLYINSPGGSVTAGLAIYDTMRYITSPVTTVCMGRAASMGAFLLAAGEPGMRFALPNSQI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++++++K RLN + +N + YE+V K +RD+ ++ EA
Sbjct: 121 MIHQPSGGFQGQATDIEIHAREVLRLKERLNRMLAENTKRPYEDVVKATERDNFLTPEEA 180
Query: 196 CDWGVVDKVLMSRIDI-EEKSK 216
+ G++D+VL SR ++ +EKS+
Sbjct: 181 KELGIIDRVLASRREMAQEKSE 202
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
Length = 194
Score = 229 bits (585), Expect = 1e-58, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 141/193 (73%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP VVEQT +GERSYDIYSRLLK+RIVFV I+D +A I AQLLFL AE+P+K+
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG +AG AIYDTMQ+IKP + T C G AAS G++LL AG KG R ALPN+
Sbjct: 61 IYMYINSPGGSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGKRSALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDI A+ I+ + + I + G+++E+VEK +DRD MSA E
Sbjct: 121 IMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMSAQE 180
Query: 195 ACDWGVVDKVLMS 207
A ++GV+D+V+ S
Sbjct: 181 ALEYGVIDQVITS 193
>gi|318041532|ref|ZP_07973488.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 196
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 138/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTSESANRIVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K++LN+ G+ +E+ DRD MS +EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKKKLNQELADRTGQPLSRIEEDTDRDFFMSPAEAAE 180
Query: 198 WGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 YGLIDKVIDKRP 192
>gi|49078976|gb|AAT49840.1| PA1801 [synthetic construct]
Length = 214
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 154/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKERI+F+ GQ+ED+MA L+ AQ LFLEAENP+K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQWLFLEAENPEKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ IK RLN+I + G+ + + + DRD MS EA
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIKERLNQILAHHTGQPLDVIARDTDRDRFMSGDEAV 197
Query: 197 DWGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 198 KYGLIDKVMTQRD 210
>gi|237751093|ref|ZP_04581573.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
gi|229373538|gb|EEO23929.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter bilis
ATCC 43879]
Length = 196
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 106/195 (54%), Positives = 150/195 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T RGERSYDIYSRLLK+RI+ ++G+I+D +++ I AQLLFLEAE+PQK++
Sbjct: 1 MNYIPYVIEKTGRGERSYDIYSRLLKDRIIMLSGEIDDSVSSSIVAQLLFLEAEDPQKDV 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VT+G +IYDTM +IKP I T C+GQAASMG+ LLS G KG R+ALP+ARI
Sbjct: 61 FLYINSPGGSVTSGFSIYDTMNYIKPDICTICVGQAASMGAFLLSCGTKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I+++K +N+I N G++ +++ + +RD MSA EA
Sbjct: 121 MIHQPLGGARGQATDIEIQAKEILRLKTIINDILAANTGQSVKKITQDCERDFYMSADEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D V+
Sbjct: 181 QKYGLIDSVMTRSSK 195
>gi|56207353|emb|CAI20832.1| novel protein similar to human and mouse ClpP caseinolytic
protease, ATP-dependent, proteolytic subunit homolog (E.
coli) (CLPP) [Danio rerio]
Length = 266
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 119/201 (59%), Positives = 157/201 (78%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +A+L+ AQLLFL++E
Sbjct: 21 QSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSE 80
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K I +YINSPGGVVT+G+AIYDTMQ+I PIST+C+GQAASMGSLLL+AG GMR +
Sbjct: 81 SNNKPIHMYINSPGGVVTSGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHS 140
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNARI++HQPSGG GQA+DI A++I+K+KR++N IY K+ G+ E +E ++RD
Sbjct: 141 LPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHTGQLLETIESVMERDRY 200
Query: 190 MSASEACDWGVVDKVLMSRID 210
MS EA D+G++DKVL+
Sbjct: 201 MSPMEAQDFGIIDKVLVHPPQ 221
>gi|298707749|emb|CBJ26066.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ectocarpus
siliculosus]
Length = 243
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 118/200 (59%), Positives = 156/200 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMV+E T RGER+YDIYSRLL+ERI+ + G + + M +L+ AQLLFLE+ENP K I
Sbjct: 40 MNYLPMVLESTPRGERAYDIYSRLLRERIICMHGPVTEQMTSLVTAQLLFLESENPDKPI 99
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGGVVTAG+AIYDTMQ+++P I T CMGQAASMGSLLL+AG MRF LPNA++
Sbjct: 100 NMYINSPGGVVTAGLAIYDTMQYVRPEICTICMGQAASMGSLLLTAGSPEMRFILPNAKV 159
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQPSGG +G A+DI A++I+K + RLN+IY ++ G+ E+EK +DRD M+A EA
Sbjct: 160 MLHQPSGGANGMAADIAIMAEEIIKTRARLNDIYAEHTGREVGEIEKVMDRDFYMTAQEA 219
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++GVVDK+L R E S
Sbjct: 220 IEFGVVDKILKKRPKEGEGS 239
>gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 201
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 107/193 (55%), Positives = 148/193 (76%), Gaps = 1/193 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQ+ GER++DIYSRLL+ERIVF+ ++D +A I AQLLFL+AE+P+K+I +YIN
Sbjct: 1 MVVEQSGVGERAFDIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS G KG R ALP++RI++HQP
Sbjct: 61 SPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQA +IE A++I+ IK+RLN++ ++ G+ Y+++ +RD MSA EA D+G+
Sbjct: 121 LGGAQGQAVEIEIQAKEILYIKKRLNDMLAEHTGQPYDKIATDTERDFFMSAQEAVDYGL 180
Query: 201 VDKVLMSRIDIEE 213
+DKV+ SR D+ +
Sbjct: 181 IDKVI-SRPDLSD 192
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
Length = 200
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 103/192 (53%), Positives = 144/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E T RGER++DIYSRLL+ERIVF+ ++ +A LI AQLLFLEAE+P+K+I L
Sbjct: 1 MIPTVIETTGRGERAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P +ST C+G AASMG+ LLSAG+ G R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K+ LNE + GK + + + +RD MSA EA D
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNEHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 181 YGLIDQVIDRSP 192
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 117/194 (60%), Positives = 152/194 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP VVEQT RGER YDIYSRLLK+RI+F+ I+D++A ++ AQ+LFLEAE+P K+
Sbjct: 1 MSFYVPYVVEQTGRGERVYDIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G+AIYDTM +IKP +ST C+GQAASM ++LLS+G KG RFALPNAR
Sbjct: 61 IYLYINSPGGVITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFALPNAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GGF GQA DIE HA +I+++K+ LNEI KN G+ E++E DRD MSA E
Sbjct: 121 IMIHQPLGGFQGQAKDIEIHANEILRMKKMLNEILSKNTGQPIEKIEMDSDRDFFMSAME 180
Query: 195 ACDWGVVDKVLMSR 208
A ++G++D + R
Sbjct: 181 AKEYGLIDDCIEKR 194
>gi|260459137|ref|ZP_05807392.1| Endopeptidase Clp [Mesorhizobium opportunistum WSM2075]
gi|259034691|gb|EEW35947.1| Endopeptidase Clp [Mesorhizobium opportunistum WSM2075]
Length = 201
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 128/194 (65%), Positives = 159/194 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQ++RGER++DI+SRLL+ERI+F+ G+I D ++ L+CAQLL LE++NP KEIS
Sbjct: 6 NLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDDISALVCAQLLSLESDNPDKEIS 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVT+G AIYDTMQ+I P+ST CMG AASMGS LL AG G R +LPNA IL
Sbjct: 66 LYINSPGGVVTSGFAIYDTMQYISCPVSTVCMGFAASMGSFLLMAGTPGRRISLPNATIL 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
LHQP GGF GQASDI+RHA+ IVK KR + E+Y ++CG++YEEVE+TLDRDH M+A EA
Sbjct: 126 LHQPLGGFQGQASDIQRHAERIVKTKRHMAELYAQHCGRSYEEVERTLDRDHFMTAREAQ 185
Query: 197 DWGVVDKVLMSRID 210
WG+VD V +R
Sbjct: 186 AWGIVDHVFDTRKK 199
>gi|229916596|ref|YP_002885242.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
gi|229468025|gb|ACQ69797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sp. AT1b]
Length = 191
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 152/190 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+P V+EQT RGER+YDIYSRLLK+RI+ + I+D++A I AQLLFL AE+P+K+ISL
Sbjct: 2 LIPTVIEQTGRGERAYDIYSRLLKDRIILLGSAIDDNVANSIVAQLLFLAAEDPEKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL AGEKG RFALPNA I++
Sbjct: 62 YINSPGGSITAGMAIYDTMNFIKPNVSTICIGMAASMGAFLLQAGEKGKRFALPNAEIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI+ HA+ I+K++ +LN+I +N G+ E +E+ +RD+ M+A +A D
Sbjct: 122 HQPLGGTQGQASDIKIHAERIIKMREKLNQIMAENTGQPLEVIERDTERDYFMAADQAKD 181
Query: 198 WGVVDKVLMS 207
+G++DKV+
Sbjct: 182 YGLIDKVMTR 191
>gi|83815964|ref|YP_446772.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
DSM 13855]
gi|83757358|gb|ABC45471.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
DSM 13855]
Length = 272
Score = 229 bits (585), Expect = 2e-58, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 146/195 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ GLVPMVVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQLL+L +E+
Sbjct: 54 DQPMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESS 113
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGV+ +G+ +YDTMQ+I P+ST C+G AASMGS+LL+AGE R LP
Sbjct: 114 EKPINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLP 173
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RL EI + G+ +++E DR++ MS
Sbjct: 174 NSRVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMS 233
Query: 192 ASEACDWGVVDKVLM 206
A EA ++G+VD VL
Sbjct: 234 AEEAEEYGLVDNVLN 248
>gi|57238933|ref|YP_180069.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58578866|ref|YP_197078.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|67460160|sp|Q5HBX5|CLPP_EHRRW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57161012|emb|CAH57918.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
gi|58417492|emb|CAI26696.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Welgevonden]
Length = 198
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 136/197 (69%), Positives = 173/197 (87%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT+RGER+YDIYSRLLKERI+F+TG IED MA+L+ AQL+FLEAENP+K+I
Sbjct: 1 MTLVPMVVEQTSRGERAYDIYSRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGGVVTAG++IYDTMQ++KP I+T C+GQAASMGSLLL+AGEKGMR ALPN+RI
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I+ IK RLN IYVK+ G+ EV +++RD+ MSA A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++DKV+ R+DI+
Sbjct: 181 QDFGIIDKVIEKRLDID 197
>gi|21674371|ref|NP_662436.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
gi|25008303|sp|Q8KC73|CLPP_CHLTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21647550|gb|AAM72778.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
tepidum TLS]
Length = 225
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 98/204 (48%), Positives = 149/204 (73%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A LI AQL+FLE+E+P
Sbjct: 22 NSINSQLVPMVIETSGRGERAFDIFSRLLRERIIFLGSPIDEHVAGLIIAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +YINSPGG V+AG+ IYDTMQ+I+P IST C+G AASMG+ LL++G G R +LP
Sbjct: 82 ERDIYIYINSPGGSVSAGLGIYDTMQYIRPDISTVCVGMAASMGAFLLASGTSGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI+ L ++ K+ G+ + + +RD MS
Sbjct: 142 HSRIMIHQPSGGAQGQETDILIQAREIEKIRHLLEDLLAKHTGQEVSRIREDSERDRWMS 201
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
A EA ++G++D++ R + +
Sbjct: 202 AVEAKEYGLIDQIFEKRPAPKSEE 225
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 145/196 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RG+R++DIYSRLL+ERIVF+ ++ D A L+ AQLLFLEAE+P+K+I L
Sbjct: 1 MIPTVIETSGRGDRAFDIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K LN+ + GK+ EE+ +RD MSA E+ +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKE 180
Query: 198 WGVVDKVLMSRIDIEE 213
+G++D+V+ R +
Sbjct: 181 YGLIDQVINRRPSASD 196
>gi|157964626|ref|YP_001499450.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae MTU5]
gi|157844402|gb|ABV84903.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
massiliae MTU5]
Length = 216
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 125/202 (61%), Positives = 166/202 (82%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ E + + VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLE
Sbjct: 8 HQFQEKILMSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLE 67
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GE+GMR
Sbjct: 68 AENPKKDIYIYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEQGMR 127
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LP++RI++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ G+ + +EK+++RD
Sbjct: 128 YSLPHSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERD 187
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MS EA +G+VD ++ SR
Sbjct: 188 NFMSPEEAKKFGLVDNIISSRD 209
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 110/202 (54%), Positives = 160/202 (79%), Gaps = 4/202 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQT+RGERSYDIYSRLLK+RIV + +I+D ++ I +QLLFLE+E+P K+I+LY
Sbjct: 3 IPYVIEQTHRGERSYDIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDPDKDINLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG++LL AG KG R++LP++RI++H
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLPSSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I++++ +LN++ VK+ G+ E VEK DRD+ M A+E+ +
Sbjct: 123 QPLGGVRGQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMGATESKAY 182
Query: 199 GVVDKVLMSRIDI----EEKSK 216
G++D++ R + +EK +
Sbjct: 183 GIIDEIQNPRKPVAAPKDEKKQ 204
>gi|330994049|ref|ZP_08317979.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
gi|329758995|gb|EGG75509.1| ATP-dependent Clp protease proteolytic subunit 1 [Gluconacetobacter
sp. SXCC-1]
Length = 213
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 127/212 (59%), Positives = 169/212 (79%), Gaps = 1/212 (0%)
Query: 5 GCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+D ++F LVPMVVEQT+RGER++DIYSRLL+ERI+F+TG + D +A ++ AQL
Sbjct: 2 AMRDRDPVEIFNNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVAAVVSAQL 61
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L+LE+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+ GE
Sbjct: 62 LYLESVNPTKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGE 121
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG RFALPN+R+++HQPSGG GQASDIE AQ+I+ I++RLNEIY ++ G+T EE+E+
Sbjct: 122 KGRRFALPNSRVMVHQPSGGAQGQASDIEIQAQEILTIRKRLNEIYNEHTGRTLEEIERK 181
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
L+RD MSA EA +G+VD+V+ + +
Sbjct: 182 LERDSYMSAEEAQAFGIVDEVVRRNVASKPAE 213
>gi|313632032|gb|EFR99140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL N1-067]
gi|313636395|gb|EFS02167.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
seeligeri FSL S4-171]
Length = 198
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 150/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMADKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIVNKAGLK 197
>gi|260584984|ref|ZP_05852727.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
gi|260157290|gb|EEW92363.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella elegans ATCC 700633]
Length = 197
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 111/197 (56%), Positives = 150/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ V+G I D MA I AQLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMVSGPIHDDMANAIIAQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+AIYDTM FIK + T MG AASMGS LL+AG KG R+ALPNA I
Sbjct: 61 YMYINSPGGSVTAGLAIYDTMNFIKADVQTIAMGLAASMGSFLLTAGTKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQA++IE A+ I+K + RLN I K G+ + +EK DRD+ M+A EA
Sbjct: 121 LIHQPLGGAQGQATEIEIAARQILKTRERLNAILAKQTGQKLKTIEKDTDRDNYMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D ++ + D++
Sbjct: 181 LEYGLIDAIMTNSKDLQ 197
>gi|300023469|ref|YP_003756080.1| endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
gi|299525290|gb|ADJ23759.1| Endopeptidase Clp [Hyphomicrobium denitrificans ATCC 51888]
Length = 217
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 147/206 (71%), Positives = 177/206 (85%), Gaps = 1/206 (0%)
Query: 8 KKDSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+D + PMVVEQT RGER YD+ SRLLKERI+FVTG +EDHMA IC QLLFL
Sbjct: 1 MRDPINTVTNTFWPMVVEQTTRGERGYDLPSRLLKERIIFVTGPVEDHMAASICMQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+KEIS+YINSPGGVVTAGMAIYDTMQF+KPP++T C+GQAASMGSLLL AG K M
Sbjct: 61 ESENPKKEISMYINSPGGVVTAGMAIYDTMQFVKPPVATLCIGQAASMGSLLLCAGAKDM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALPNARI++HQPSGGFSGQASDIERHA+DI+K+KRRLNE YVK+ G++YE +EKTLDR
Sbjct: 121 RFALPNARIMVHQPSGGFSGQASDIERHAEDIIKMKRRLNETYVKHTGQSYEMIEKTLDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
D+ M+A +A D+G++DKVL SR +++
Sbjct: 181 DYFMTADQARDFGIIDKVLESRDEVD 206
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 103/189 (54%), Positives = 146/189 (77%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V+EQ+ RGER++DIYSRLL+ERI+F+ Q++ ++A LI AQLLFL+AE+P+K+I LY
Sbjct: 3 IPIVIEQSGRGERAFDIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++H
Sbjct: 63 INSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+ KRRLN+ ++ G+ E + + +RD MS EA D+
Sbjct: 123 QPLGGAQGQATDIEIQAREILYHKRRLNDYLAEHTGQPIERIAEDTERDFFMSPDEARDY 182
Query: 199 GVVDKVLMS 207
G++D+V+
Sbjct: 183 GLIDQVIDR 191
>gi|126732556|ref|ZP_01748354.1| Protease subunit of ATP-dependent Clp protease [Sagittula stellata
E-37]
gi|126707002|gb|EBA06070.1| Protease subunit of ATP-dependent Clp protease [Sagittula stellata
E-37]
Length = 197
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 127/196 (64%), Positives = 166/196 (84%), Gaps = 1/196 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGER+YDI+SRLLKERIVF+ G + D M++L+ AQLL LEAENP KEIS+YIN
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIVFLNGPVHDGMSSLVVAQLLHLEAENPSKEISMYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVT+G++IYDTMQ+IKP +ST +GQAASMGSLLL+AG GMRF+LPN+RI++HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIKPKVSTLVVGQAASMGSLLLTAGAAGMRFSLPNSRIMVHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG+ GQA+DI HA++ +K+KRRLNEIYV++ G+TYE VE L+RD+ M A +A +WG+
Sbjct: 121 SGGYQGQATDIMIHAEETIKLKRRLNEIYVRHTGQTYEAVEAALERDNFMDAEKAKEWGL 180
Query: 201 VDKVLMSR-IDIEEKS 215
+D+++ SR + EE
Sbjct: 181 IDEIVTSRVPEGEETD 196
>gi|165971139|gb|AAI58370.1| clpp protein [Xenopus (Silurana) tropicalis]
Length = 228
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 115/203 (56%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
V LVP+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +++L+ AQLLFL++E+ +
Sbjct: 10 PVLSPLVPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSLVVAQLLFLQSESNK 69
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 70 KPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPN 129
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K+++NEIY K+ + +E ++RD MS
Sbjct: 130 SRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSP 189
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
+EA ++G++DKVL+ E
Sbjct: 190 TEAQEFGILDKVLVHPPQDGEDE 212
>gi|87306486|ref|ZP_01088633.1| ATP-dependent clp protease proteolytic subunit [Blastopirellula
marina DSM 3645]
gi|87290665|gb|EAQ82552.1| ATP-dependent clp protease proteolytic subunit [Blastopirellula
marina DSM 3645]
Length = 196
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 144/194 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P VVE++ R ER YDIYSRLLK+RI+F+ Q+ D MA I AQ+LFL++E+P +I
Sbjct: 1 MPLIPYVVEKSGREERVYDIYSRLLKDRIIFLGTQVNDEMANCIVAQMLFLQSEDPAADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LY+NSPGG V+AGMAIYDTMQFI ++T+C+GQAASMG++LL+AG G R ALPNAR+
Sbjct: 61 HLYVNSPGGSVSAGMAIYDTMQFITCDVATYCIGQAASMGAVLLTAGAAGKRHALPNARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G G A +I HA + +IK RLNEI +K+ G T + +EK DRD MSA E+
Sbjct: 121 MIHQPLAGMQGTAEEILIHATEFKRIKHRLNEILIKHTGHTIDRIEKDTDRDRFMSAEES 180
Query: 196 CDWGVVDKVLMSRI 209
C++G++D V+
Sbjct: 181 CEYGLIDHVIEKMP 194
>gi|15888940|ref|NP_354621.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens str. C58]
gi|21759065|sp|Q8UEX6|CLPP1_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|15156717|gb|AAK87406.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
tumefaciens str. C58]
Length = 202
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 118/199 (59%), Positives = 157/199 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERI+F+ G+++D ++ L+CAQLLFLEAENP
Sbjct: 1 MRETMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I LYINSPGG+VT+G A+YDTM++I+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPIHLYINSPGGMVTSGFAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGTRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I + K R+ +Y ++CG++YEE E +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCGRSYEEFETAMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRID 210
EA +WG++D++L R D
Sbjct: 181 VQEALEWGLIDRILEVRED 199
>gi|221065471|ref|ZP_03541576.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
gi|220710494|gb|EED65862.1| Endopeptidase Clp [Comamonas testosteroni KF-1]
Length = 201
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 118/196 (60%), Positives = 155/196 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQ+ RGERS+DIYSRLL++R++F+ G++ D ++ L+CAQLLFLEAENP K I
Sbjct: 5 MMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE G R ALPNA +
Sbjct: 65 HLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMALPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQASDI HA+++++ K R+ +Y ++CG++Y+EVE+ LDRD M+A EA
Sbjct: 125 HVHQPLGGVQGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDRFMTAKEA 184
Query: 196 CDWGVVDKVLMSRIDI 211
+WG++DKVL R
Sbjct: 185 REWGLIDKVLDRRTAT 200
>gi|290969192|ref|ZP_06560717.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
gi|290780698|gb|EFD93301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Megasphaera
genomosp. type_1 str. 28L]
Length = 200
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 112/201 (55%), Positives = 159/201 (79%), Gaps = 1/201 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+VVEQT++GERSYD+YSRL+K+RI+F++GQ+ED MA + AQLLFLEAE+P K+
Sbjct: 1 MSMYVPVVVEQTSQGERSYDLYSRLMKDRIIFLSGQVEDTMANSLIAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAGMAIYDTMQ+IKP +ST C+G AASM S+LL+AG KG RFALP+++
Sbjct: 61 IYLYINSPGGVVTAGMAIYDTMQYIKPDVSTICVGSAASMASVLLAAGTKGKRFALPHSQ 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQA+DIE H ++I++++R LN I + G+ + +EK +RD+ ++A +
Sbjct: 121 VMIHQPLGGVQGQATDIEIHTREILRVRRELNGILAAHTGQPLDVIEKDTERDNFLTAED 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A +G++D++L+ R E +
Sbjct: 181 AKHYGLIDEILV-RPQQENRK 200
>gi|308067009|ref|YP_003868614.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305856288|gb|ADM68076.1| ATP-dependent Clp protease proteolytic subunit(Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 193
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 111/187 (59%), Positives = 146/187 (78%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQ+NRGER+YDIYSRLLK+RI+ + + D +A I AQ+LFL AE+P+K+I LYIN
Sbjct: 1 MVVEQSNRGERAYDIYSRLLKDRIILLGSDVNDVVANSIIAQMLFLAAEDPEKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG +TAGMAI+DTMQ+IKP +ST C+G AASMG+ LL+AG KG RFALPN+ I++HQP
Sbjct: 61 SPGGSITAGMAIFDTMQYIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQA+DIE A+ I+K++ +LN I G+ E +EK DRD+ MSA +A ++G+
Sbjct: 121 LGGAQGQATDIEIRARRILKMRDKLNRILADRTGQPLERIEKDTDRDYFMSADDAKEYGI 180
Query: 201 VDKVLMS 207
+DKVL S
Sbjct: 181 IDKVLTS 187
>gi|163789795|ref|ZP_02184232.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
AT7]
gi|159875017|gb|EDP69084.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
AT7]
Length = 197
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 150/196 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++G ++D +A + AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPVDDDLANAVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+AI+DTM FIK + T MG AASMGS LL+AG KG R+ALPNA I
Sbjct: 61 YIYINSPGGSVTAGLAIFDTMNFIKADVQTIAMGMAASMGSFLLTAGTKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++IE A+ I+K + RLN+I + G+ E +++ DRD+ MSA +A
Sbjct: 121 MIHQPSGGSQGQATEIEIAARHILKTRERLNKILSERTGQPIEVIQRDTDRDNYMSAEDA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G++D+++ + +
Sbjct: 181 KAYGLIDEIMENNSSL 196
>gi|118791462|ref|XP_319765.3| AGAP009019-PA [Anopheles gambiae str. PEST]
gi|116117612|gb|EAA14822.3| AGAP009019-PA [Anopheles gambiae str. PEST]
Length = 225
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 114/204 (55%), Positives = 154/204 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
FL LVP+VVEQT RGER+YDI+SRLLKERI+ + G I D +++LI AQLLFL++EN
Sbjct: 21 NKSFLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENG 80
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I +YINSPGG VTAG+AIYDTMQ++KPP++T+C+GQA SMGSLLL+AG GMR +LP
Sbjct: 81 TKPIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLP 140
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NARI++HQPSGG GQA+DI+ A++I+K+K++L EIY K+ + + + ++RD +S
Sbjct: 141 NARIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYGKHTKTSLDVLYSKMERDTFLS 200
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
EA G++D VL E +
Sbjct: 201 PEEAQTLGIIDTVLEHPPSSTEAA 224
>gi|148223587|ref|NP_001088816.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Xenopus laevis]
gi|76779451|gb|AAI06237.1| LOC496087 protein [Xenopus laevis]
Length = 247
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 157/203 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +++++ AQLLFL++E+ +
Sbjct: 29 PILSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLSSVVVAQLLFLQSESNK 88
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VTAG+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN
Sbjct: 89 KPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSSGMRHSLPN 148
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI A++I+K+K+++NEIY K+ + +E ++RD MS
Sbjct: 149 SRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAKHTRQPLSVIESVMERDRYMSP 208
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
+EA ++G++DKVL+ E
Sbjct: 209 TEAQEFGILDKVLVHPPQDGEDE 231
>gi|313499614|gb|ADR60980.1| ClpP [Pseudomonas putida BIRD-1]
Length = 192
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 117/189 (61%), Positives = 151/189 (79%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQLLFLEAENP K+I LYIN
Sbjct: 1 MVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG KG R LPN+R+++HQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAKGKRHCLPNSRVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQA+DIE HAQ+I+ IK RLNE+ + G+ E +++ +RD+ MSAS A ++G+
Sbjct: 121 LGGFQGQATDIEIHAQEILNIKARLNELLAYHTGQDLETIKRDTERDNFMSASRAAEYGL 180
Query: 201 VDKVLMSRI 209
+D V R
Sbjct: 181 IDSVYDKRQ 189
>gi|284044102|ref|YP_003394442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
gi|283948323|gb|ADB51067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
Length = 194
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 151/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER++DIYSRLL ERI+F+ ++D +A LI AQLL LE+E+P K+
Sbjct: 1 MSPLVPMVVEQTSRGERAFDIYSRLLNERIIFLGTPVDDQIANLIVAQLLHLESEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG V AG+AIYDTMQFIKP + T C+G A SMG+LLLS G +G R ALPNA+
Sbjct: 61 ISIYINSPGGSVYAGLAIYDTMQFIKPDVQTICVGIAMSMGALLLSGGARGKRMALPNAK 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL+HQ S F GQA+DIE HA++I+ I+RRL+EI + GK +EV+K +RD+ MS+ E
Sbjct: 121 ILIHQVSSSFQGQATDIEIHAREIIDIRRRLDEIIALHSGKPVDEVKKDTERDYFMSSEE 180
Query: 195 ACDWGVVDKVLMS 207
A D+G++D+V+
Sbjct: 181 AKDYGIIDRVIAK 193
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 99/190 (52%), Positives = 147/190 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQ+ RGER++DIYSRLL+ERIVF+ Q++ +A LI AQLLFL++E+P+K+I +
Sbjct: 1 MIPIVIEQSGRGERAFDIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGM I+DTM+ I+P + T C G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ KR+LNE ++ G+ ++ + + +RD MS E+ +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQESRE 180
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 181 YGLIDQVIDR 190
>gi|116873833|ref|YP_850614.1| ATP-dependent Clp protease proteolytic subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116742711|emb|CAK21835.1| ATP-dependent Clp protease proteolytic subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 198
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMSEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIVNKAGLK 197
>gi|158336585|ref|YP_001517759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acaryochloris
marina MBIC11017]
gi|158306826|gb|ABW28443.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acaryochloris
marina MBIC11017]
Length = 238
Score = 229 bits (584), Expect = 2e-58, Method: Composition-based stats.
Identities = 112/216 (51%), Positives = 148/216 (68%), Gaps = 10/216 (4%)
Query: 2 SFEGCAKKDSEDVFL---GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQ-------I 51
F +S ++ +VPMVVEQ+ RGER++DIYSRLL+ERIVF+ G I
Sbjct: 9 HFYPGLSGESSPTYMPPRNIVPMVVEQSGRGERAFDIYSRLLRERIVFLGGGGSANGGGI 68
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+D +A I AQLLFLE+ENP+++I LYINSPGG +TAGMAIYDT+Q I+P + T C G A
Sbjct: 69 DDAVADAIVAQLLFLESENPEQDIYLYINSPGGSITAGMAIYDTIQHIRPDVCTICFGLA 128
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
ASMG+ LL AG G R ALPNARI++HQP GG GQA DIE A++I+ +K LN +
Sbjct: 129 ASMGAFLLCAGTAGKRMALPNARIMIHQPLGGAQGQAVDIEIRAKEILYLKNNLNHLMAG 188
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ G+ +E +E +RD MSA EA +G++D+VL
Sbjct: 189 HTGQPFERIEADTERDFFMSAEEAQKYGLIDQVLTR 224
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 144/192 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I +Y
Sbjct: 26 LPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 86 VNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE A++I+ +K LN + ++ G+ ++ + DRD+ +S +EA ++
Sbjct: 146 QPLGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQPLAKISEDTDRDYFLSPAEAVEY 205
Query: 199 GVVDKVLMSRID 210
G++D+V+ S D
Sbjct: 206 GLIDRVVDSSGD 217
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 103/194 (53%), Positives = 151/194 (77%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVE T RGERS+D+YSRLLKERI+FV I+D +A + AQLL+L++E+ K+I
Sbjct: 24 GIIPAVVESTPRGERSWDLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQ 83
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGV+ AG+AIYDTMQ+++P +STFCMG A SMG+++L+AG+KG R+ LPN+ +L
Sbjct: 84 MYINSPGGVIYAGLAIYDTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVL 143
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA+DIE A++I++++R L EI K+ G+T E + + DR++ +SA +A
Sbjct: 144 IHQPLGGAEGQAADIEITAREILRLRRNLYEILAKHTGQTIERIMQDSDRNYYLSAQQAV 203
Query: 197 DWGVVDKVLMSRID 210
++G+VD VL +
Sbjct: 204 EYGLVDDVLNPSNE 217
>gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
Length = 199
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 144/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E T RGER++DIYSRLL+ERIVF+ ++ +A LI AQLLFLEAE+P+K+I L
Sbjct: 1 MIPTVIETTGRGERAFDIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P +ST C+G AASMG+ LLSAG+ G R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K+ LN+ + GK + + + +RD MSA EA D
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+
Sbjct: 181 YGLIDQVIDRSP 192
>gi|57237197|ref|YP_178209.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni RM1221]
gi|86149593|ref|ZP_01067823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|86151504|ref|ZP_01069719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|86153638|ref|ZP_01071841.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88597431|ref|ZP_01100666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|148926357|ref|ZP_01810041.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|153951283|ref|YP_001397440.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. doylei 269.97]
gi|157414501|ref|YP_001481757.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205356561|ref|ZP_03223324.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|218561871|ref|YP_002343650.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168]
gi|315123791|ref|YP_004065795.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|9297087|sp|P54413|CLPP_CAMJE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460171|sp|Q5HWX6|CLPP_CAMJR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166201811|sp|A7H1R0|CLPP_CAMJD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172047014|sp|A8FJZ3|CLPP_CAMJ8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57166001|gb|AAW34780.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni RM1221]
gi|85839861|gb|EAQ57120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni CF93-6]
gi|85841851|gb|EAQ59098.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 260.94]
gi|85842599|gb|EAQ59811.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni HB93-13]
gi|88190492|gb|EAQ94466.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 84-25]
gi|112359577|emb|CAL34361.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni NCTC 11168]
gi|145844749|gb|EDK21854.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8486]
gi|152938729|gb|ABS43470.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. doylei 269.97]
gi|157385465|gb|ABV51780.1| ATP-dependent clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81116]
gi|205345566|gb|EDZ32206.1| ATP-dependent CLp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni CG8421]
gi|284925484|gb|ADC27836.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni IA3902]
gi|307747143|gb|ADN90413.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni M1]
gi|315017513|gb|ADT65606.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni ICDCCJ07001]
gi|315057629|gb|ADT71958.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni S3]
gi|315928124|gb|EFV07442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni DFVF1099]
gi|315930200|gb|EFV09315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 305]
gi|315931999|gb|EFV10952.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 327]
Length = 194
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 109/189 (57%), Positives = 148/189 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLFLEAE+P K+I LY
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G RFALPN+RI++H
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+++K LN+I KN + ++ K +RD MSA EA ++
Sbjct: 123 QPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSAQEAKEY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|206973614|ref|ZP_03234532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|206747770|gb|EDZ59159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
Length = 193
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I G+ E++ +RD+ M+A EA
Sbjct: 121 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDGVVEKK 193
>gi|209964556|ref|YP_002297471.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Rhodospirillum centenum SW]
gi|209958022|gb|ACI98658.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Rhodospirillum centenum SW]
Length = 209
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 120/205 (58%), Positives = 163/205 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E LVPMVVEQTNRGER+YDIYSRLLKERI+F+ G + D +A+L+CAQ LFLEAENP
Sbjct: 3 EPQMNALVPMVVEQTNRGERAYDIYSRLLKERIIFLVGGVNDAVASLVCAQFLFLEAENP 62
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
KEIS YINSPGG VT+G+AIYDTMQ+I+ P++T C+GQAASMG+LLL+ G G R++LP
Sbjct: 63 NKEISFYINSPGGYVTSGLAIYDTMQYIRCPVATICVGQAASMGALLLAGGGAGRRYSLP 122
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGG GQA+DIE AQ+I+++++RLNEI+ ++ G+ + +EK ++RD MS
Sbjct: 123 NSRIMIHQPSGGAQGQAADIEIQAQEILRMRQRLNEIFQRHTGQNLDVIEKAVERDKFMS 182
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
EA +G++D+V +R + S+
Sbjct: 183 PEEAKAFGLIDEVFSNRPNSAPNSQ 207
>gi|148543625|ref|YP_001270995.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri DSM 20016]
gi|184153034|ref|YP_001841375.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri JCM 1112]
gi|194468177|ref|ZP_03074163.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
reuteri 100-23]
gi|227363410|ref|ZP_03847534.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri MM2-3]
gi|227545094|ref|ZP_03975143.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri CF48-3A]
gi|300909236|ref|ZP_07126697.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
gi|325681981|ref|ZP_08161499.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri
MM4-1A]
gi|167008650|sp|A5VII4|CLPP_LACRD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706458|sp|B2G613|CLPP_LACRJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148530659|gb|ABQ82658.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
reuteri DSM 20016]
gi|183224378|dbj|BAG24895.1| endopeptidase Clp proteolytic subunit [Lactobacillus reuteri JCM
1112]
gi|194453030|gb|EDX41928.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
reuteri 100-23]
gi|227071510|gb|EEI09809.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri MM2-3]
gi|227184943|gb|EEI65014.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri CF48-3A]
gi|300893101|gb|EFK86460.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
gi|324978625|gb|EGC15574.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri
MM4-1A]
Length = 197
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 150/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDEMANSIVAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GMAIYDTM FIK + T +G AASM S+L+S+G KG RF LP++++
Sbjct: 61 YLYINSPGGVVTSGMAIYDTMNFIKADVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A +I+K ++ LN I KN G+ E+++ +RDH ++A EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIAATEILKTRKMLNGILAKNSGQPIEKIQADTERDHYLTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D V+ + ++
Sbjct: 181 VDYGLLDGVMENNSKLK 197
>gi|84686590|ref|ZP_01014483.1| Protease subunit of ATP-dependent Clp protease [Maritimibacter
alkaliphilus HTCC2654]
gi|84665503|gb|EAQ11980.1| Protease subunit of ATP-dependent Clp protease [Rhodobacterales
bacterium HTCC2654]
Length = 193
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 124/193 (64%), Positives = 160/193 (82%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGER+YDI+SRLLKERI+F+ G + D M++LICAQLLFLEAENP KEI++YIN
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIIFLNGPVHDGMSSLICAQLLFLEAENPSKEIAMYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVT+G++IYDTMQ+I+P +ST +GQAASMGSLLL+AG GMRF+LPN+RI++HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIRPKVSTLVIGQAASMGSLLLTAGAPGMRFSLPNSRIMVHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG+ GQA+DI HAQ+ K+K RLN IYVK+ G+ + V L+RD+ M +A DWG+
Sbjct: 121 SGGYQGQATDIMIHAQETQKLKDRLNSIYVKHTGQKLKAVVDALERDNFMDPEQAKDWGL 180
Query: 201 VDKVLMSRIDIEE 213
+D++L SR D E
Sbjct: 181 IDEILESRGDAPE 193
>gi|91203769|emb|CAJ71422.1| strongly similar to ATP-dependent Clp protease proteolytic subunit
ClpP [Candidatus Kuenenia stuttgartiensis]
Length = 224
Score = 229 bits (583), Expect = 2e-58, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 148/197 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP VVE+T GER YDI+SRLLK+RI+F+ IED + L+ AQ+LFL+ EN ++I++Y
Sbjct: 28 VPYVVEKTGHGERHYDIFSRLLKDRIIFIGSAIEDTLTNLVIAQILFLQNENKNQDINIY 87
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAG+AIYDTMQF++ ++TFC+GQA SM ++LL+ G K RF LP+ RI+LH
Sbjct: 88 INSPGGSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAGGTKNKRFGLPHTRIMLH 147
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG G A+DI A++I+K+K+ LNEI VK+ G+ E +E +DRD MS+ +A ++
Sbjct: 148 QPWGGMRGTATDISIQAEEILKMKKCLNEILVKHTGQPLERIEADVDRDFYMSSHDAKEY 207
Query: 199 GVVDKVLMSRIDIEEKS 215
G++D+V+ S D +EK
Sbjct: 208 GLIDEVIESLRDKKEKE 224
>gi|116250938|ref|YP_766776.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|116243107|sp|Q1MK43|CLPP1_RHIL3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|115255586|emb|CAK06667.1| putative ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. viciae 3841]
Length = 203
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 118/198 (59%), Positives = 160/198 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAEN
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGVVT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPINLYINSPGGVVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEAGGRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMMIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +WG++D++L R
Sbjct: 181 AEEALEWGLIDRILTVRE 198
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 142/193 (73%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP VVEQT +GERSYDIYSRLLK+RIVFV I+DH+A I AQLLFL AE+P+KE
Sbjct: 1 MSVYVPYVVEQTAQGERSYDIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDPEKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG +AG AIYDTMQ+IKP + T C G AAS G++LL AG KG R ALPN+
Sbjct: 61 IYMYINSPGGSTSAGFAIYDTMQYIKPDVHTICTGFAASFGAILLLAGAKGKRSALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDI A+ I+ + + I + G+++E+VEK +DRD MSA E
Sbjct: 121 IMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMSAQE 180
Query: 195 ACDWGVVDKVLMS 207
A ++GV+D+V+ S
Sbjct: 181 ALEYGVIDQVITS 193
>gi|167521860|ref|XP_001745268.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776226|gb|EDQ89846.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 153/191 (80%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVE T GER++DIYSRLL+ERIV + G ++D MA+ I AQLL LE+ENP + +S+YIN
Sbjct: 1 MVVESTPVGERAFDIYSRLLRERIVCLMGPVDDAMASTIVAQLLHLESENPDEPVSVYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAG+AIYDT+Q+I+P I+T C GQA SMGSLLL+AG G R+ALPN+RI++HQP
Sbjct: 61 SPGGSVTAGLAIYDTLQYIRPRITTVCSGQACSMGSLLLTAGSPGHRYALPNSRIMVHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG GQASDI HA++I+K+K +N +Y + G+TY+E+E LDRD MSA EA D+G+
Sbjct: 121 SGGARGQASDIAIHAEEILKLKTTINNLYAHHTGRTYDEIEAALDRDRFMSAQEAKDFGL 180
Query: 201 VDKVLMSRIDI 211
+D++++SR +
Sbjct: 181 IDQIVVSRKQV 191
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 102/194 (52%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVV+Q RGER+YDIYSRLLK+RI+F+ I+D +A LI AQLLFLE+E+P KEI
Sbjct: 1 MNLIPMVVQQDGRGERAYDIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
Y+N+PGG +++GMAIYDTM++IKPP++T C+GQAASMG+LLL+AGE+G R ALP++RI
Sbjct: 61 FFYLNTPGGHISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQA+DI+ A++I+++K L+ I + + ++ +RD+ M++ +A
Sbjct: 121 LIHQPLGGFQGQATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D++++ R
Sbjct: 181 KEYGIIDEIIVKRS 194
>gi|56750021|ref|YP_170722.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81300363|ref|YP_400571.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|1705929|sp|P54415|CLPP1_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460444|sp|Q5N665|CLPP1_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|755165|gb|AAC67306.1| ClpP [Synechococcus elongatus PCC 7942]
gi|56684980|dbj|BAD78202.1| ATP-dependent protease ClpP [Synechococcus elongatus PCC 6301]
gi|81169244|gb|ABB57584.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 197
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 141/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+VVE++ RGER++DIYSRLL+ERI+F+ + +A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVVEESGRGERAFDIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTM I+P +ST C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLAHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA DIE A +I+ IK+ LNE+ + G+ +E DRD MSASEA +
Sbjct: 121 HQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMSASEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 181 YGLIDRVIDRRA 192
>gi|217963429|ref|YP_002349107.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes HCC23]
gi|290893656|ref|ZP_06556637.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|217332699|gb|ACK38493.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes HCC23]
gi|290556729|gb|EFD90262.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|307571996|emb|CAR85175.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
Length = 198
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIINKSGLK 197
>gi|294508705|ref|YP_003572764.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
gi|294345034|emb|CBH25812.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
Length = 273
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 146/195 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ GLVPMVVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQLL+L +E+
Sbjct: 55 DQPMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESS 114
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGV+ +G+ +YDTMQ+I P+ST C+G AASMGS+LL+AGE R LP
Sbjct: 115 EKPINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLP 174
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RL EI + G+ +++E DR++ MS
Sbjct: 175 NSRVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMS 234
Query: 192 ASEACDWGVVDKVLM 206
A EA ++G+VD VL
Sbjct: 235 AEEAEEYGLVDNVLN 249
>gi|108804374|ref|YP_644311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
gi|116243164|sp|Q1AVS9|CLPP_RUBXD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|108765617|gb|ABG04499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
Length = 200
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P V+EQ+ RGER+ DIYSRLLK+RI+F+ ++D +A I AQLL LE+E+P+++I+
Sbjct: 8 GVIPYVIEQSPRGERAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDIN 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V+AG+AIYDTMQF+KP I T +G AASMG+ LL+AG KG RFALPN RIL
Sbjct: 68 LYINSPGGSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRIL 127
Query: 137 LHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
LHQP+ G +GQASD+E HA+++++ KRRLNEI ++ G+ Y+++E+ DRD IM A EA
Sbjct: 128 LHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEA 187
Query: 196 CDWGVVDKVLMS 207
++G++D ++
Sbjct: 188 IEYGLIDDIVRH 199
>gi|16804506|ref|NP_465991.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes EGD-e]
gi|46908640|ref|YP_015029.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes str. 4b F2365]
gi|47092754|ref|ZP_00230539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|47096060|ref|ZP_00233661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|224503291|ref|ZP_03671598.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL R2-561]
gi|226225016|ref|YP_002759123.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes Clip81459]
gi|254825410|ref|ZP_05230411.1| protease ClpP [Listeria monocytogenes FSL J1-194]
gi|254828043|ref|ZP_05232730.1| ATP-dependent Clp protease [Listeria monocytogenes FSL N3-165]
gi|254831109|ref|ZP_05235764.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 10403S]
gi|254853529|ref|ZP_05242877.1| endopeptidase Clp [Listeria monocytogenes FSL R2-503]
gi|254900394|ref|ZP_05260318.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J0161]
gi|254913367|ref|ZP_05263379.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J2818]
gi|254932291|ref|ZP_05265650.1| endopeptidase Clp [Listeria monocytogenes HPB2262]
gi|254937748|ref|ZP_05269445.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|254991680|ref|ZP_05273870.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-064]
gi|255521328|ref|ZP_05388565.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-175]
gi|284802906|ref|YP_003414771.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284996047|ref|YP_003417815.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|300765033|ref|ZP_07075021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|17374630|sp|Q9RQI6|CLPP_LISMO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389670|sp|Q71WV9|CLPP_LISMF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|6166251|gb|AAF04744.1|AF102775_1 protease ClpP [Listeria monocytogenes]
gi|16411956|emb|CAD00546.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes EGD-e]
gi|46881912|gb|AAT05206.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes serotype 4b str. F2365]
gi|47015521|gb|EAL06453.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|47018842|gb|EAL09590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|225877478|emb|CAS06192.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes serotype 4b str. CLIP 80459]
gi|258600427|gb|EEW13752.1| ATP-dependent Clp protease [Listeria monocytogenes FSL N3-165]
gi|258606902|gb|EEW19510.1| endopeptidase Clp [Listeria monocytogenes FSL R2-503]
gi|258610351|gb|EEW22959.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|284058468|gb|ADB69409.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284061514|gb|ADB72453.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|293583848|gb|EFF95880.1| endopeptidase Clp [Listeria monocytogenes HPB2262]
gi|293591373|gb|EFF99707.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J2818]
gi|293594653|gb|EFG02414.1| protease ClpP [Listeria monocytogenes FSL J1-194]
gi|300514333|gb|EFK41392.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|328465333|gb|EGF36590.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 1816]
gi|328471278|gb|EGF42178.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 220]
Length = 198
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 106/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D +++++ ++
Sbjct: 181 KDYGLIDDIIINKSGLK 197
>gi|319783748|ref|YP_004143224.1| endopeptidase Clp [Mesorhizobium ciceri biovar biserrulae WSM1271]
gi|317169636|gb|ADV13174.1| Endopeptidase Clp [Mesorhizobium ciceri biovar biserrulae WSM1271]
Length = 201
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 127/194 (65%), Positives = 158/194 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQ++RGER++DI+SRLL+ERI+F+ G+I D ++ L+CAQLL LE++NP KEIS
Sbjct: 6 SLVPMVIEQSSRGERAFDIFSRLLRERIIFINGEINDDISALVCAQLLSLESDNPDKEIS 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVT+G AIYDTMQ+I P+ST CMG AASMGS LL AG G R +LPNA IL
Sbjct: 66 LYINSPGGVVTSGFAIYDTMQYISCPVSTVCMGFAASMGSFLLMAGTPGRRISLPNATIL 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
LHQP GGF GQASDI+RHA+ I + KR + E+Y ++CG+TYEEVE+TLDRDH M+A EA
Sbjct: 126 LHQPLGGFQGQASDIQRHAERIGRTKRHMTELYAQHCGRTYEEVERTLDRDHFMTAREAQ 185
Query: 197 DWGVVDKVLMSRID 210
WG+VD V +R
Sbjct: 186 AWGIVDHVFDTRKK 199
>gi|229085578|ref|ZP_04217813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228697726|gb|EEL50476.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
Length = 198
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 109/197 (55%), Positives = 141/197 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E F+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ I AQLLFLEAE+
Sbjct: 2 EGFFMNAIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSIVAQLLFLEAEDA 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALP
Sbjct: 62 EKDIFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V + +RD+ M+
Sbjct: 122 NSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIISDRTGQPIEKVAEDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA +G+VD V+ +
Sbjct: 182 AEEAKAYGIVDAVIEKK 198
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
Length = 237
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 141/189 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++PMVVEQ+ GER++D+YSRLL++RI+F+ I+D +A + AQ+LFLE+E+P+K+I
Sbjct: 34 GVIPMVVEQSGMGERAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQ 93
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM IYDTMQ I+P + T C G AASMG+ LL++G G R +LP++RI+
Sbjct: 94 LYINSPGGSVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIM 153
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ K LN + ++ G+ E + +RD MSA+EA
Sbjct: 154 IHQPLGGAQGQAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQ 213
Query: 197 DWGVVDKVL 205
++G++D V+
Sbjct: 214 EYGLIDNVI 222
>gi|294011932|ref|YP_003545392.1| ATP-dependent Clp protease protease subunit [Sphingobium japonicum
UT26S]
gi|292675262|dbj|BAI96780.1| ATP-dependent Clp protease protease subunit [Sphingobium japonicum
UT26S]
Length = 211
Score = 229 bits (583), Expect = 3e-58, Method: Composition-based stats.
Identities = 126/210 (60%), Positives = 165/210 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVP+V+EQ+NRGERS+DIYSRLL+ERI+FVTGQ+EDHMA+LI AQLLFL
Sbjct: 1 MTDIMSDPMAALVPIVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+K+I +YINSPGGVVT+GMAI+DTM++I+P + T C+GQAASMGS LL+AGE G
Sbjct: 61 ESENPKKDIWMYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R AL NARI++HQPSGG G ASDIE A++I++I+ RLN +YV+ G++ EEVE+ +DR
Sbjct: 121 RIALSNARIMVHQPSGGAQGMASDIEIQAKEILRIRSRLNNLYVQYTGRSLEEVERAMDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D + A EA +G+VD+V R + E +
Sbjct: 181 DTFLEAEEAKAFGLVDEVFDRRPAMAETPE 210
>gi|189345948|ref|YP_001942477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
gi|189340095|gb|ACD89498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
limicola DSM 245]
Length = 225
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 100/202 (49%), Positives = 155/202 (76%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + LVPMV+E + RGER++DI+SRLL+ERI+F+ I++H+A L+ AQL+FLE+E+P
Sbjct: 22 EGIRNTLVPMVIETSGRGERAFDIFSRLLRERIIFLGSGIDEHVAGLVMAQLIFLESEDP 81
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++I +YINSPGG V+AG+ IYDTMQ+I+P I+T C+G AASMG+ LL++G KG R +LP
Sbjct: 82 ERDIFIYINSPGGSVSAGLGIYDTMQYIRPDIATVCVGMAASMGAFLLASGTKGKRASLP 141
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQ +DI A++I KI++ L E+ K+ G+ +++ + +RD M+
Sbjct: 142 HSRIMIHQPSGGAQGQETDIIIQAREIEKIRKLLEELLAKHTGRDVQQIREDSERDRWMN 201
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A+EA ++G++D+V R E+
Sbjct: 202 AAEALEYGIIDQVFEKRPAPEK 223
>gi|307107893|gb|EFN56134.1| hypothetical protein CHLNCDRAFT_56121 [Chlorella variabilis]
Length = 209
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 158/192 (82%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP+V+E T+RGER++DIYSRLL+ERIV V G I+DH++ LI AQLL+LE+ENP+K ISL
Sbjct: 1 MVPVVIESTSRGERAFDIYSRLLRERIVCVNGPIDDHLSNLIVAQLLYLESENPEKPISL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTMQ+I+ P+ T +GQAASM SLLL+AGE G R +LP++R+++
Sbjct: 61 YINSPGGVVTAGLAIYDTMQYIRCPVGTLAVGQAASMASLLLAAGEAGQRRSLPHSRVMV 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQA+DI A++I+K++ LN +YVK+ G+T + VE+ L+RD MSA EA +
Sbjct: 121 HQPSGGARGQATDIAIAAKEILKMRELLNGLYVKHTGQTAQRVEEVLERDFFMSAPEARE 180
Query: 198 WGVVDKVLMSRI 209
+G+VD+V+ R
Sbjct: 181 FGIVDEVIEQRP 192
>gi|317407024|gb|EFV87052.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans C54]
Length = 201
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 116/198 (58%), Positives = 157/198 (79%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ+ RGERS+DIYSRLL+ERI+F++G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MSETMQLVPMVVEQSGRGERSFDIYSRLLRERIIFLSGEVNDAVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I +YINSPGGV+T+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE G R AL
Sbjct: 61 GKPIHMYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGKRAALA 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA + +HQP GGF GQASD+ HA+++ + K+R+ +Y ++CG++YE+VE++LDRD M+
Sbjct: 121 NASLHVHQPLGGFQGQASDMLIHAEEMQRTKQRIIRLYAEHCGRSYEDVERSLDRDRYMT 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +WG++D V+ +R
Sbjct: 181 AEEAVEWGLIDHVMDARS 198
>gi|284929120|ref|YP_003421642.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809579|gb|ADB95284.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 214
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 104/194 (53%), Positives = 143/194 (73%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+VPMVVEQ+ GER++DIYSRLL+ERI+F+ ++D MA I AQLL+L++E+P+
Sbjct: 21 AKMENIVPMVVEQSGMGERAFDIYSRLLRERIIFLGTPVDDQMANSIVAQLLYLDSEDPE 80
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V AG+AIYDTM+ I+P I T C G AASMG+ LLS G KG R ALP+
Sbjct: 81 KDIQLYINSPGGSVYAGLAIYDTMKQIRPDIVTICFGLAASMGAFLLSGGTKGKRMALPS 140
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA DI AQ+I+ IK+RLN + ++ GK ++ + +RD MS+
Sbjct: 141 SRIMIHQPLGGAQGQAVDIAIQAQEILYIKKRLNNMLSEHTGKPFDTIAADTERDFFMSS 200
Query: 193 SEACDWGVVDKVLM 206
EA ++G++DKV+
Sbjct: 201 KEAVEYGLIDKVIS 214
>gi|222096291|ref|YP_002530348.1| ATP-dependent clp protease, proteolytic subunit clpp [Bacillus
cereus Q1]
gi|221240349|gb|ACM13059.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus Q1]
Length = 193
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM I+P + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIRPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I G+ E++ +RD+ M+A EA
Sbjct: 121 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDGVVEKK 193
>gi|170740561|ref|YP_001769216.1| endopeptidase Clp [Methylobacterium sp. 4-46]
gi|168194835|gb|ACA16782.1| Endopeptidase Clp [Methylobacterium sp. 4-46]
Length = 211
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 125/204 (61%), Positives = 157/204 (76%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
D + LVPMVVEQ++RGER++DIYSRLL+ERIVF TG ++D A+L AQLLFLE
Sbjct: 1 MPDLVTRYASLVPMVVEQSSRGERAFDIYSRLLRERIVFFTGAVDDQTASLTVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+KEISLYINSPGGVVT+G+AIYDTMQFI+ P+ST C+GQAASMGSLLL+AG G R
Sbjct: 61 AENPKKEISLYINSPGGVVTSGLAIYDTMQFIRCPVSTLCVGQAASMGSLLLAAGAPGQR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FA NARI++HQP GGF GQA+DI HA++ IKRR+ EIY ++ G+ Y VE+ L+RD
Sbjct: 121 FATANARIMVHQPIGGFQGQATDIMIHARETEAIKRRMTEIYARHTGQDYATVERALERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDI 211
+ A +G++D VL R +I
Sbjct: 181 TFLDPEAARAFGLIDGVLTGRPEI 204
>gi|257460311|ref|ZP_05625414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
gi|257442376|gb|EEV17516.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
gracilis RM3268]
Length = 194
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 116/190 (61%), Positives = 152/190 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQT+RGERSYDIYSRLLK+RIV ++G+I+D +A+ I AQLLFLEAE+P K+I L
Sbjct: 2 VIPYVIEQTSRGERSYDIYSRLLKDRIVMLSGEIDDAVASSIVAQLLFLEAEDPDKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G +IYDTM +IKP +ST C+GQAASMG+ LLS G KG R+ALPN+RI++
Sbjct: 62 YINSPGGVVTSGFSIYDTMNYIKPDVSTICIGQAASMGAFLLSCGAKGKRYALPNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+++K LN I +N GK +VEK DRD MSA +A
Sbjct: 122 HQPLGGAQGQATDIEIQAKEILRMKEILNGILSQNSGKDLAQVEKDTDRDFFMSAEDAVQ 181
Query: 198 WGVVDKVLMS 207
+G++D+VL
Sbjct: 182 YGLIDQVLQK 191
>gi|258404644|ref|YP_003197386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfohalobium retbaense DSM 5692]
gi|257796871|gb|ACV67808.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfohalobium retbaense DSM 5692]
Length = 197
Score = 228 bits (582), Expect = 3e-58, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 157/192 (81%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP+V+E T RGER+YDIYSRLLK+RI+ + I+D++A LICAQLLFLE+ENP KEI+ Y
Sbjct: 3 VPIVIESTGRGERAYDIYSRLLKDRIILLGTPIDDNVANLICAQLLFLESENPDKEINFY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VT+G+AIYDTMQ+I P++T C+GQAASMG++LL+AGE GMR+ALP+ RI+LH
Sbjct: 63 INSPGGSVTSGLAIYDTMQYISAPVATLCLGQAASMGAVLLAAGEPGMRYALPHGRIMLH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GGF GQA+DI+ A++I+++K LN I ++ G E++E+ DRD+ M A+EA D+
Sbjct: 123 QPMGGFQGQATDIDIQAREILRLKSSLNSILSRHTGVELEKMERDTDRDYFMGATEAADY 182
Query: 199 GVVDKVLMSRID 210
GV+D+VL SR +
Sbjct: 183 GVIDQVLASRRE 194
>gi|325922708|ref|ZP_08184448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
gi|325546825|gb|EGD17939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Xanthomonas
gardneri ATCC 19865]
Length = 196
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 119/190 (62%), Positives = 160/190 (84%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGER+YDIYSRLLKER++F+ G I+DHMA +I AQLLFLEA+NP+K+IS+YIN
Sbjct: 1 MVVEQTSRGERAYDIYSRLLKERLIFLVGPIDDHMANVIVAQLLFLEADNPEKDISIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAGMAIYDTMQ+IKP +ST C+GQAASMG+LLL++G G R+ALPN+R+++HQP
Sbjct: 61 SPGGVVTAGMAIYDTMQYIKPDVSTICVGQAASMGALLLASGAAGKRYALPNSRVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQA+DI+ HA++I+ ++ RLNEI K+ G++ E + + +RD+ SA +A +G+
Sbjct: 121 LGGFQGQATDIDIHAREILTLRSRLNEILAKHTGQSLETIGRDTERDNFKSAVDAQAYGL 180
Query: 201 VDKVLMSRID 210
VD+VL R +
Sbjct: 181 VDQVLERRPE 190
>gi|193214418|ref|YP_001995617.1| endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
gi|193087895|gb|ACF13170.1| Endopeptidase Clp [Chloroherpeton thalassium ATCC 35110]
Length = 226
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 153/209 (73%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + LVPMV+E + RGER++DI+SRLL+ERI+F+ I+DH A+LI AQL++L
Sbjct: 18 SSRTESSINNMLVPMVIETSGRGERAFDIFSRLLRERIIFLGTPIDDHSASLIMAQLIYL 77
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P+++I +YINSPGG V+AG+ +YDTMQ+I+P +ST C+G AASMG+ LL++G G
Sbjct: 78 ESEDPERDIFMYINSPGGSVSAGLGLYDTMQYIRPDVSTVCVGMAASMGAFLLASGTAGK 137
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LP++RI++HQPSGG GQ +DI A++I KI+R L E++ ++ + +V + +R
Sbjct: 138 RASLPHSRIMIHQPSGGAQGQETDIVIQAREIEKIRRLLEELFAQHTKQDVVKVREDSER 197
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D M+A EA ++G++D++ R EE
Sbjct: 198 DRWMNAQEAKEYGIIDEIFDRRKAPEEAK 226
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 98/196 (50%), Positives = 145/196 (73%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ +VP VVE RGER YDI+++LL ERI+F+ ++D ++ ++ AQLLFLE+++P K
Sbjct: 4 KMMPVVPYVVENKGRGERIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQDPDK 63
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+IS+YINSPGG VT+G+AIYDTMQ+IKP +ST C+G AASM +++L+ G KG RFALP++
Sbjct: 64 DISIYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFALPHS 123
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GG G A DIE ++++ I+ ++NEI + + E++E+ DRD MS +
Sbjct: 124 RIMIHQPWGGAEGTAKDIEIRTRELLFIRDQINEILSHHTNQPKEKIEEDTDRDFYMSPA 183
Query: 194 EACDWGVVDKVLMSRI 209
EA +G+VDKV+ R
Sbjct: 184 EAVKYGLVDKVIEPRK 199
>gi|229815146|ref|ZP_04445483.1| hypothetical protein COLINT_02192 [Collinsella intestinalis DSM
13280]
gi|229809376|gb|EEP45141.1| hypothetical protein COLINT_02192 [Collinsella intestinalis DSM
13280]
Length = 206
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 100/195 (51%), Positives = 146/195 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP V+EQT RGERSYDIYSRLL +RIVF+ ++ A L+ AQLL LE+++ +K+I
Sbjct: 7 SALVPYVIEQTPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDI 66
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V +G+AI DTM +IKP +ST C+G AASM ++LL+AG G RF+LP+++I
Sbjct: 67 SLYINSPGGEVYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAAGAPGKRFSLPHSKI 126
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++IE A++I + + LN+I GK +E+VE+ +RD+ + A +A
Sbjct: 127 MIHQPSGGAQGQQTEIEIAAREIRETRNTLNQILADCTGKPFEQVERDTERDNYLRAEQA 186
Query: 196 CDWGVVDKVLMSRID 210
++G++D+++ SR D
Sbjct: 187 LEYGLIDRIVTSRND 201
>gi|118474160|ref|YP_892812.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter fetus
subsp. fetus 82-40]
gi|118413386|gb|ABK81806.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
fetus subsp. fetus 82-40]
Length = 196
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 112/193 (58%), Positives = 148/193 (76%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P VVE+T++GERSYDIYSRLLK+RI+ ++G+IED MA+ I AQ+LFLEAE+P K+
Sbjct: 1 MSYYIPYVVERTSKGERSYDIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVT+G +IYDTM +IKP + T C+GQAASMG+ LLS G KG R+ALPN+R
Sbjct: 61 IYLYINSPGGVVTSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGTKGKRYALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LN KN G+ ++ K DRD MSA E
Sbjct: 121 IMIHQPLGGARGQATDIEIQAKEILRLKEVLNSTLAKNTGQKLAKIAKDTDRDFFMSAHE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++D VL
Sbjct: 181 AAEYGLIDNVLEK 193
>gi|320164411|gb|EFW41310.1| ATP-dependent Clp protease proteolytic subunit [Capsaspora
owczarzaki ATCC 30864]
Length = 257
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 149/193 (77%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVE T + ER +D++SRLL+ERI+ + G I+D A++I QLLFLE +NP K I
Sbjct: 60 GVIPTVVENTGKSERWFDLFSRLLRERIICLMGPIDDSTASVIVGQLLFLEGDNPLKPIH 119
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAGMAIYDTMQ+++ P+ST CMGQAASMGSL+L+AG KG RF LP+AR++
Sbjct: 120 MYINSPGGVVTAGMAIYDTMQYVQSPVSTICMGQAASMGSLILAAGAKGQRFILPHARVM 179
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDI A++I+K++ LN IYV++ G+ + +E +RD+ M+ EA
Sbjct: 180 IHQPLGGAQGQASDIAIQAREILKMREMLNRIYVEHTGQPLKRIEDATERDYFMNPEEAK 239
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 240 EFGIIDQVIQKRD 252
>gi|307722032|ref|YP_003893172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
gi|306980125|gb|ADN10160.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
autotrophica DSM 16294]
Length = 196
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 154/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVE+T RGERSYDIYSRLLK+RIV ++G++ D +A+ I AQ LFLEAE+P+K+I
Sbjct: 1 MSYIPYVVEKTGRGERSYDIYSRLLKDRIVMLSGEVNDAVASTIVAQFLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGVVTAG+AI+DTM +I+P ++T C+GQAASMG+ LLS GEKG R+ALP+ARI
Sbjct: 61 YFYINSPGGVVTAGLAIFDTMNYIRPHVATICIGQAASMGAFLLSCGEKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A++I+++K+ LN I KN G+ + +E DRD+ MSA+EA
Sbjct: 121 MIHQPLGGAQGQATDIAIQAEEILRMKKELNGILAKNTGQNIKTIEADTDRDNFMSAAEA 180
Query: 196 CDWGVVDKVLMSRID 210
D+G++D+VL+
Sbjct: 181 KDYGMIDEVLVKNDK 195
>gi|283955633|ref|ZP_06373126.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
gi|283792858|gb|EFC31634.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 1336]
Length = 194
Score = 228 bits (582), Expect = 4e-58, Method: Composition-based stats.
Identities = 109/189 (57%), Positives = 148/189 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLFLEAE+P K+I LY
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G RFALPN+RI++H
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+++K LN+I KN + ++ K +RD MSA EA ++
Sbjct: 123 QPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVTKIAKDTERDFFMSAQEAKEY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|317486004|ref|ZP_07944859.1| Clp protease [Bilophila wadsworthia 3_1_6]
gi|316922777|gb|EFV44008.1| Clp protease [Bilophila wadsworthia 3_1_6]
Length = 207
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 116/199 (58%), Positives = 162/199 (81%), Gaps = 1/199 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP+VVE + R ER+YDI+SRLLK+RIV + ++ D +A+LICAQLLFLE+++P+KEI LY
Sbjct: 9 VPIVVETSGRTERAYDIFSRLLKDRIVLLGSEVNDAVASLICAQLLFLESQDPEKEIYLY 68
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDTM +I PPI+T CMG+AASMG+ LLSAG+KGMR+ALPN+++++H
Sbjct: 69 INSPGGSVTAGMAIYDTMNYITPPIATVCMGRAASMGAFLLSAGQKGMRYALPNSQVMIH 128
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GGF GQA+DI+ HA++I++++ LN + K+ G+ E++ + +RD+ M+A A +
Sbjct: 129 QPLGGFQGQATDIDIHAREILRMRETLNGLLAKHTGQPIEKIAQDTERDNFMTAEMAQAY 188
Query: 199 GVVDKVLMSRID-IEEKSK 216
G+VDKVL SR D + EKS+
Sbjct: 189 GLVDKVLASRRDLLAEKSE 207
>gi|291542673|emb|CBL15783.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
bromii L2-63]
Length = 193
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 148/193 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGERS+DIYSRLL++RIV + ++ A+++ AQLL+LE+++P K+I
Sbjct: 1 MALVPYVIEQSSRGERSFDIYSRLLEDRIVMLNEEVNSASASVVVAQLLYLESKDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VT G AI+DTM +IK +ST CMG AASMG+ LL+AG KG R ALPN+ I
Sbjct: 61 SLYINSPGGSVTDGFAIFDTMNYIKCDVSTICMGMAASMGAFLLAAGAKGKRLALPNSDI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+D+E H + I+ +K+RLN+I N G+ + + K +RD+ M+A +A
Sbjct: 121 MIHQPSGGAQGQATDMEIHTRHILDMKKRLNQILADNTGQPIDVIAKDTNRDNFMTAQQA 180
Query: 196 CDWGVVDKVLMSR 208
++G++DKV+ R
Sbjct: 181 LEYGLIDKVIEKR 193
>gi|217979044|ref|YP_002363191.1| Endopeptidase Clp [Methylocella silvestris BL2]
gi|217504420|gb|ACK51829.1| Endopeptidase Clp [Methylocella silvestris BL2]
Length = 215
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 141/202 (69%), Positives = 175/202 (86%), Gaps = 1/202 (0%)
Query: 10 DSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D +V+ L+P V+E T+RGER +DIYSRLL+ERI+F+TG +EDHMA++I AQLLFLEA
Sbjct: 5 DPIEVYNSYLIPQVIENTSRGERGFDIYSRLLRERIIFLTGPVEDHMASVIIAQLLFLEA 64
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
ENP+KEIS+YINSPGGVVTAG+AIYDTMQFI+P +ST C+GQAASMGSLLL AGE G RF
Sbjct: 65 ENPKKEISMYINSPGGVVTAGLAIYDTMQFIRPKVSTLCVGQAASMGSLLLCAGEAGQRF 124
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALPNARI++HQPSGGF GQASDI RHA+DI+K+KRRLN+IYVK+ G+ Y+ +EKTLDRDH
Sbjct: 125 ALPNARIMVHQPSGGFQGQASDILRHAEDIMKVKRRLNDIYVKHTGRDYDTIEKTLDRDH 184
Query: 189 IMSASEACDWGVVDKVLMSRID 210
MS+ +A ++G+VD V+ R D
Sbjct: 185 FMSSDDAREFGIVDSVISQRPD 206
>gi|145341425|ref|XP_001415810.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576033|gb|ABO94102.1| mitochondrial Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 232
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 112/203 (55%), Positives = 159/203 (78%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + LVPMV+EQTNRGER +DIYSRLLKERIVFV G I+D++++L AQLLFL
Sbjct: 21 PSRIAHPRTYALVPMVLEQTNRGERVFDIYSRLLKERIVFVNGPIDDNVSSLTVAQLLFL 80
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P + I +YINSPGG VTAG+ IYDTMQ++ PPI T C+GQA+SMGSLLL+AGE G
Sbjct: 81 ESVSPTQPIWMYINSPGGSVTAGLGIYDTMQYVSPPIHTLCVGQASSMGSLLLAAGEPGQ 140
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R +LP++R++LHQPSGG SGQASDI HAQ+I+ ++++L +IY+K+ + ++ + TL+R
Sbjct: 141 RRSLPHSRVMLHQPSGGASGQASDIAIHAQEILNVRQKLVQIYMKHTKQNFDSIGVTLER 200
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D M+ +A ++G++D+V+ +R
Sbjct: 201 DTFMTPEDAKEFGLIDEVIETRP 223
>gi|57168633|ref|ZP_00367765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|305432739|ref|ZP_07401899.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
gi|57019914|gb|EAL56594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
coli RM2228]
gi|304444248|gb|EFM36901.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter coli
JV20]
Length = 194
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 109/189 (57%), Positives = 148/189 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLFLEAE+P K+I LY
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G RFALPN+RI++H
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+++K LN+I KN + ++ K +RD MSA EA ++
Sbjct: 123 QPLGGARGQATDIEIQAKEILRLKAILNDILAKNTKQKVAKIVKDTERDFFMSAQEAKEY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|328956747|ref|YP_004374133.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
17-4]
gi|328673071|gb|AEB29117.1| ATP-dependent Clp protease proteolytic subunit [Carnobacterium sp.
17-4]
Length = 197
Score = 228 bits (581), Expect = 4e-58, Method: Composition-based stats.
Identities = 102/196 (52%), Positives = 148/196 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G ++D +A + AQLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPVDDDLANAVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+AI+DTM FIK + T MG AASMGS LL+AG KG R+ALPNA I
Sbjct: 61 YIYINSPGGSVTAGLAIFDTMNFIKADVQTIAMGMAASMGSFLLTAGTKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA++IE A+ I+ + RLN+I G+ E +++ DRD+ MSA +A
Sbjct: 121 MIHQPSGGSQGQATEIEIAARHILNTRERLNKILSDRTGQPIEVIKRDTDRDNYMSAEDA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G++D+++ + +
Sbjct: 181 KAYGLIDEIMENSSAL 196
>gi|313110498|ref|ZP_07796383.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa 39016]
gi|310882885|gb|EFQ41479.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa 39016]
Length = 213
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 121/193 (62%), Positives = 154/193 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ+ RGER+YDIYSRLLKERI+F+ GQ+ED+MA L+ AQLLFLEAENP+K+I
Sbjct: 18 GLVPMVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPEKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ IK RLN+I + + + + + DRD MS EA
Sbjct: 138 IHQPLGGFQGQASDIEIHAKEILFIKERLNQILAHHTRQPLDVIARDTDRDRFMSGDEAV 197
Query: 197 DWGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 198 KYGLIDKVMTQRD 210
>gi|162148815|ref|YP_001603276.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209545437|ref|YP_002277666.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161787392|emb|CAP56987.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Gluconacetobacter diazotrophicus PAl 5]
gi|209533114|gb|ACI53051.1| Endopeptidase Clp [Gluconacetobacter diazotrophicus PAl 5]
Length = 212
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 126/203 (62%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+D ++F LVPMVVEQT+RGER++DIYSRLL+ERI+F+TG + D +A ++ AQLL
Sbjct: 1 MRDRDPVEIFSSALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVAAVVSAQLL 60
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
+LE+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+ GEK
Sbjct: 61 YLESVNPTKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEK 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RFALPNAR+++HQPSGG GQASDIE A++I+ I++RLNEIY + G+T E++E+ L
Sbjct: 121 GRRFALPNARVMVHQPSGGAQGQASDIEIQAREILTIRQRLNEIYETHTGQTLEDIERRL 180
Query: 185 DRDHIMSASEACDWGVVDKVLMS 207
+RD MSA EA +G+VD+V+ +
Sbjct: 181 ERDSYMSAEEAQAFGIVDEVVRN 203
>gi|89100779|ref|ZP_01173633.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89084537|gb|EAR63684.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 193
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 141/190 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ++RGERSYDIYSRLLK+RI+ + +I DH+A + AQLLFL A+ P K+I
Sbjct: 1 MTAIPYVIEQSSRGERSYDIYSRLLKDRIIMIGEEINDHVANSVIAQLLFLAADAPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG TAG AIYDTMQ+IKP + T C G AAS G++LL AG KG R +LPN+ I
Sbjct: 61 SLYINSPGGSTTAGFAIYDTMQYIKPDVRTICTGMAASFGAMLLLAGTKGKRCSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K++ +N I + G+ E+V + DRD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATEIEISAKRILKLREHINGIISEKTGQPVEKVARDTDRDYFMSAEEA 180
Query: 196 CDWGVVDKVL 205
++G++D ++
Sbjct: 181 KEYGIIDTII 190
>gi|259047276|ref|ZP_05737677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
gi|259036052|gb|EEW37307.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Granulicatella adiacens ATCC 49175]
Length = 197
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 111/197 (56%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ V+G I+D MA I AQLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMVSGPIQDDMANAIIAQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG+AIYDTM FIK + T MG AASMGS LL+AG KG R+ALPNA I
Sbjct: 61 YMYINSPGGSVTAGLAIYDTMNFIKADVQTIAMGLAASMGSFLLTAGAKGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQA++IE A+ I+K + RLN+I K G+ +EK DRD+ M+A EA
Sbjct: 121 LIHQPLGGAQGQATEIEIAARQILKTRERLNKILAKQTGQKLSRIEKDTDRDNYMTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D ++ S +++
Sbjct: 181 LEYGLIDAIMESSKEMK 197
>gi|146337660|ref|YP_001202708.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium sp.
ORS278]
gi|146190466|emb|CAL74465.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bradyrhizobium sp. ORS278]
Length = 205
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 122/194 (62%), Positives = 160/194 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQ++RGERS+DIYSRLL+ERIVF+ G++ D ++ L+CAQLLFLEAENP++ I
Sbjct: 5 MQLVPMVIEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENPKRPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+G+A+YDTMQF+K P+ T CMG A SMGS LL AGE G R ALPNA +
Sbjct: 65 HLYINSPGGVVTSGLAMYDTMQFVKAPVHTLCMGTARSMGSFLLMAGEPGERTALPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GGF GQASDI HA+++ + KRR+ +Y ++CG++YE+VE+TLDRDH M+A EA
Sbjct: 125 HVHQPLGGFQGQASDIMIHAREMEQTKRRMIRLYAEHCGRSYEDVERTLDRDHFMTADEA 184
Query: 196 CDWGVVDKVLMSRI 209
DWG++D+V+ R
Sbjct: 185 QDWGLIDRVVKQRD 198
>gi|154175235|ref|YP_001407437.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
curvus 525.92]
gi|112803266|gb|EAU00610.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
curvus 525.92]
Length = 196
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 113/193 (58%), Positives = 150/193 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+VVE+T+RGERSYDIYSRLLK+RIV ++G+IED MA I AQLLFLEAE+P+K+
Sbjct: 1 MSYYVPVVVERTSRGERSYDIYSRLLKDRIVMLSGEIEDGMAASIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G +I+DTM +IKP + T C+GQAASMG+ LLS G G R+ALPN+R
Sbjct: 61 IYLYINSPGGVITSGFSIFDTMNYIKPDVCTICIGQAASMGAFLLSCGAPGKRYALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE A++I+++K LN I KN G+ ++ K +RD MS+ E
Sbjct: 121 IMIHQPLGGARGQASDIEIQAREILRLKEILNGILAKNTGQKLNKIVKDTERDFFMSSHE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++DK+L
Sbjct: 181 AKEYGLIDKILEK 193
>gi|326790230|ref|YP_004308051.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
lentocellum DSM 5427]
gi|326540994|gb|ADZ82853.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
lentocellum DSM 5427]
Length = 193
Score = 228 bits (581), Expect = 5e-58, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 145/193 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQTNRGERSYDIYSRLLK+RI+ + ++ + A LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPMVIEQTNRGERSYDIYSRLLKDRIIILGDEVNNVTANLIVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +T GMAIYDTMQ+IK +ST CMG AASMG+ LL+ G KG RFALPNA +
Sbjct: 61 MFYINSPGGSITDGMAIYDTMQYIKCDVSTICMGMAASMGAFLLAGGTKGKRFALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ AQ I+K K R+N + + G+ E + ++RD+ +A EA
Sbjct: 121 MIHQPLGGAKGQATDIQITAQHIIKTKERMNRMLSEFTGQPIERINNDVERDNWKTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G++D ++ S+
Sbjct: 181 KEYGLIDDIITSK 193
>gi|304311290|ref|YP_003810888.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium HdN1]
gi|301797023|emb|CBL45236.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium HdN1]
Length = 189
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 124/188 (65%), Positives = 156/188 (82%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+EQT RGERS+DIYSRLLKER++F+ GQ+EDHMA LI AQLLFLE+ENP K+I LYIN
Sbjct: 1 MVIEQTARGERSFDIYSRLLKERLIFMVGQVEDHMANLIVAQLLFLESENPDKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGM+IYDTMQFIK +ST C+GQA SMG+ LL+AG G R+ALPN+R+++HQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKADVSTICVGQACSMGAFLLAAGAPGKRYALPNSRVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDIE HA++I+ +KRRLNE+ K+ G+ E+VE DRD+ MSA +A ++G+
Sbjct: 121 LGGFQGQASDIEIHAREIITMKRRLNEMLAKHSGQPIEKVEGDTDRDNFMSAFDAKEYGL 180
Query: 201 VDKVLMSR 208
VD+VL R
Sbjct: 181 VDQVLEKR 188
>gi|87301613|ref|ZP_01084453.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
gi|87283830|gb|EAQ75784.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
Length = 213
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 142/190 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P VVEQ+ RGER++DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+K+I
Sbjct: 19 GVLPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDQVADSLVAQLLFLEAEDPEKDIQ 78
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALP+ARI+
Sbjct: 79 IYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRMALPSARIM 138
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA DIE A++I+ +K LN + ++ G+ ++ + DRD+ +S EA
Sbjct: 139 IHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMAEHTGQPLAKIAEDTDRDYFLSPPEAV 198
Query: 197 DWGVVDKVLM 206
+G++D+V+
Sbjct: 199 SYGLIDRVVD 208
>gi|307299175|ref|ZP_07578976.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotogales
bacterium mesG1.Ag.4.2]
gi|306914971|gb|EFN45357.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotogales
bacterium mesG1.Ag.4.2]
Length = 205
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 104/202 (51%), Positives = 153/202 (75%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
VP VVE RGER +DIY++LL ERIVF+ I+D ++ ++ AQLLFLE+++P+K
Sbjct: 4 NMAPFVPYVVEDRGRGERIFDIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEK 63
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+LYINSPGG +T+G+AIYDTMQ+IKP IST C+G AASMG++LL+ G KG RFALPN+
Sbjct: 64 DINLYINSPGGSITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRFALPNS 123
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
R+++HQP GG G A DIE A++I+ ++ LN+I K+ G++ +++EK DRD MS++
Sbjct: 124 RVMIHQPFGGAEGVAKDIEIRAREILYLRDELNKILAKHTGQSIKKIEKDADRDFFMSST 183
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
EA ++G++DKV+ + ++ K
Sbjct: 184 EAVEYGMIDKVIEQKAKVKTKE 205
>gi|229173439|ref|ZP_04300983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
gi|228610133|gb|EEK67411.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
MM3]
Length = 198
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLAGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I G+ E++ +RD+ M+A EA
Sbjct: 126 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDGVVEKK 198
>gi|209546440|ref|YP_002278330.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209539297|gb|ACI59230.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 203
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 118/203 (58%), Positives = 163/203 (80%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERIVF+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVVEQSSRGERSFDIYSRLLRERIVFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I LYINSPGGVVT+G+A+YDTM++I+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPIYLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGERAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQA+D++ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQATDMQIHAEEILKTKQRMTRLYAEHCGRSYEDFERAMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDIEEK 214
+ EA +WG++DK++ R ++
Sbjct: 181 SQEALEWGLIDKIMQLREVPADQ 203
>gi|229018102|ref|ZP_04174977.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
gi|229024283|ref|ZP_04180742.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228737058|gb|EEL87594.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228743193|gb|EEL93318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
Length = 198
Score = 227 bits (580), Expect = 5e-58, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 140/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I + G+ E+V +RD+ M+A EA
Sbjct: 126 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIAERTGQPVEKVAHDTERDYFMTAVEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDAVIEKK 198
>gi|326803696|ref|YP_004321514.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Aerococcus urinae ACS-120-V-Col10a]
gi|326651369|gb|AEA01552.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Aerococcus urinae ACS-120-V-Col10a]
Length = 200
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 103/200 (51%), Positives = 149/200 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ+ RGER+YDIYSRLLK+RI+ ++G++ D MA + AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSPRGERAYDIYSRLLKDRIIMLSGEVNDDMANSVIAQLLFLDAQDNDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAGMAIYDTMQF+ + T G AASMGS+LL G KG R+ALP++ +
Sbjct: 61 YIYINSPGGSVTAGMAIYDTMQFVNADVVTIVTGLAASMGSILLIGGTKGKRYALPHSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GG GQA++IE A+ I++ K+ L EI + G+ ++VEK +DRD+ M+A EA
Sbjct: 121 LIHQPLGGVQGQATEIEISARHILQTKQTLKEIIAERSGQDIDKVEKDMDRDYWMTAKEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
D+G++D+++ S ++ +
Sbjct: 181 KDYGIIDEIMASNQGLKGQE 200
>gi|157124223|ref|XP_001660372.1| endopeptidase clp, putative [Aedes aegypti]
gi|108882807|gb|EAT47032.1| endopeptidase clp, putative [Aedes aegypti]
Length = 225
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 113/202 (55%), Positives = 153/202 (75%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L LVP+VVEQT RGER+YDI+SRLLKERI+ + G I D +++LI AQLLFL++EN K
Sbjct: 23 RLLNLVPIVVEQTGRGERAYDIFSRLLKERIICLMGPIHDDLSSLIVAQLLFLQSENGTK 82
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
I +YINSPGG VTAG+AIYDTMQ++KPP++T+C+GQA SMGSLLL+AG GMR +LPNA
Sbjct: 83 PIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCVGQACSMGSLLLAAGAPGMRHSLPNA 142
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQPSGG GQA+DI+ A++I+K+K++L EIY K+ + + + ++RD ++
Sbjct: 143 RIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEIYGKHTKTSVDVLYSKMERDTFLNPE 202
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
EA G++D VL E S
Sbjct: 203 EAQALGIIDTVLEHPPSSTEGS 224
>gi|257063882|ref|YP_003143554.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
gi|256791535|gb|ACV22205.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
Length = 206
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 138/198 (69%), Gaps = 2/198 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQ+ RGER+YDIYSRLL +RI+F+ I+D++A L+ AQLL LE+ +P+K+ISLY
Sbjct: 9 IPYVIEQSPRGERTYDIYSRLLNDRIIFLGDAIDDNVANLVVAQLLHLESSDPEKDISLY 68
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AGMAIYD MQFI+ +ST C+G AASM S+L +AG G RF PN++I++H
Sbjct: 69 INSPGGSVSAGMAIYDAMQFIRCDVSTVCIGMAASMASVLTAAGTPGKRFITPNSQIMIH 128
Query: 139 QPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
QP GG + D E A ++ K + RL I + G+T E + +RDH ++A EA
Sbjct: 129 QPMGGAESRTQQTDFEIAATEMRKTRERLEGILAAHTGQTIETIHADSERDHWLTAEEAK 188
Query: 197 DWGVVDKVLMSRIDIEEK 214
+G+VD+++ SR K
Sbjct: 189 AYGLVDEIITSRGTNASK 206
>gi|219849052|ref|YP_002463485.1| Endopeptidase Clp [Chloroflexus aggregans DSM 9485]
gi|219543311|gb|ACL25049.1| Endopeptidase Clp [Chloroflexus aggregans DSM 9485]
Length = 221
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 94/196 (47%), Positives = 144/196 (73%), Gaps = 1/196 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMVVE T+RGER++DIYSRLLKERIV + I+D +A LI AQLLFLE+E+P ++I L
Sbjct: 27 LIPMVVESTSRGERAFDIYSRLLKERIVILGTPIDDQIANLIVAQLLFLESEDPDRDIWL 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTM I+P ++T C+G A SM + +L+ G KG R++LP++ I +
Sbjct: 87 YINSPGGSVTAGLGIYDTMHHIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIHM 146
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
H GG G A D+E A++++++++ + E+ K+ G+ E + K DRD M+ +A +
Sbjct: 147 HPAGGGARGYAPDVEIMARELLRLQQLVRELLAKDTGQPIERIAKDFDRDLFMTPEQAKE 206
Query: 198 WGVVDKVLMSRIDIEE 213
+G++D++L+ R D+++
Sbjct: 207 YGIIDEILI-REDVKK 221
>gi|53802553|ref|YP_112777.1| ATP-dependent Clp protease proteolytic subunit [Methylococcus
capsulatus str. Bath]
gi|67460462|sp|Q60C68|CLPP1_METCA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|53756314|gb|AAU90605.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylococcus
capsulatus str. Bath]
Length = 206
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 117/193 (60%), Positives = 161/193 (83%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVP+V+EQ+ RGER++DIYSRLLKER++F+ GQ+ED+MA L+ AQLLFLE+ENP K+I
Sbjct: 10 GLVPVVIEQSARGERAFDIYSRLLKERVIFLVGQVEDYMANLVIAQLLFLESENPDKDIH 69
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG+VTAG+AIYDTMQFIKP +ST C+GQAASMG+LLL+ G G R+ LP++RI+
Sbjct: 70 LYINSPGGLVTAGLAIYDTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIM 129
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDI+ HA++I+ ++ RLN+I + G+ E+++ DRD+ M ++A
Sbjct: 130 IHQPLGGFQGQASDIDIHAREILAVRDRLNKILAHHTGQPIEKIQIDTDRDNFMGGNDAV 189
Query: 197 DWGVVDKVLMSRI 209
++G++DKVL+SR
Sbjct: 190 EYGLIDKVLVSRA 202
>gi|322383234|ref|ZP_08057045.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321152503|gb|EFX45289.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 191
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 113/192 (58%), Positives = 154/192 (80%), Gaps = 1/192 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQ RGERSYDIYSRLLK+RI+F+ I+D + L+ AQLLFL A++ K+I LYIN
Sbjct: 1 MVVEQEARGERSYDIYSRLLKDRIIFIGSAIDDDVVNLVIAQLLFLSAQDADKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAG+ IYDTMQ+IKP +ST C+G AASMGSLLL+AG KG RFALPN+ +++HQP
Sbjct: 61 SPGGSVTAGLGIYDTMQYIKPDVSTICVGMAASMGSLLLTAGAKGKRFALPNSEVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG GQA+DI+ HA I+K +++LNEIYV + G+TY++++K DRD+ +SA +A ++G+
Sbjct: 121 LGGVRGQAADIKIHADWILKTRKKLNEIYVHHTGQTYDKIDKDTDRDNFLSALDAKEYGL 180
Query: 201 VDKVLMSRIDIE 212
+D+V+ R D++
Sbjct: 181 IDEVIT-RSDLK 191
>gi|258592920|emb|CBE69229.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[NC10 bacterium 'Dutch sediment']
Length = 205
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 115/194 (59%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQT+RGER+YDI+SRLLK+RI+F+ I+D + LI AQLLFLEAE+P K+I
Sbjct: 1 MQLIPMVVEQTSRGERAYDIFSRLLKDRILFIGTPIDDAESNLIIAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LY+NSPGG VTA +AIYDTMQ+IKP I T CMGQAAS +LLL+AG KG R+ALP+ARI
Sbjct: 61 HLYVNSPGGSVTASLAIYDTMQYIKPAIETICMGQAASGAALLLAAGAKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDI+ A++I+++++ L+ I + G+ E +EK DRD MS SEA
Sbjct: 121 MIHQPYGGAQGQASDIQIQAKEILRMRQELDRIIADHTGQPLERIEKDSDRDFFMSPSEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D+V+ SR
Sbjct: 181 KDYGLIDEVIYSRD 194
>gi|325293013|ref|YP_004278877.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
gi|325060866|gb|ADY64557.1| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium sp.
H13-3]
Length = 203
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 118/200 (59%), Positives = 156/200 (78%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ+ RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVVEQSARGERSFDIYSRLLRERIIFLNGEVNDAVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I LYINSPGGVVT+G+A+YDTM++I+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 61 KKPIHLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCMGTARSMGSFLLMAGEPGARAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I + K R+ +Y ++C ++Y+E E +DRD M+
Sbjct: 121 NASILIHQPSGGFQGQASDMLIHAEEIRQTKHRMTRLYAEHCKRSYDEFEAAMDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSRIDI 211
EA +WG++D+VL R D+
Sbjct: 181 VEEALEWGLIDRVLDVREDV 200
>gi|319652198|ref|ZP_08006317.1| ATP-dependent Clp protease [Bacillus sp. 2_A_57_CT2]
gi|317396187|gb|EFV76906.1| ATP-dependent Clp protease [Bacillus sp. 2_A_57_CT2]
Length = 193
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 144/192 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ+++GERSYDIYSRLLK+RI+ + +I D + + AQLLFL AE+P+K+I
Sbjct: 1 MTAIPYVIEQSSKGERSYDIYSRLLKDRIIMIGEEINDVVTNSVIAQLLFLAAESPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG TAG AI+DT+Q+IKP + T C G AAS G++LL AG+KG R++LPN+ I
Sbjct: 61 SLYINSPGGSTTAGFAIFDTIQYIKPDVRTICTGMAASFGAMLLLAGKKGKRYSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K++ +N I + G+ E+V + DRD+ M+A EA
Sbjct: 121 MIHQPLGGARGQATEIEISAKRIIKLREHINGIIAERTGQPIEKVARDTDRDYFMTAEEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+++
Sbjct: 181 KEYGIIDEIIYK 192
>gi|315639062|ref|ZP_07894230.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
gi|315480838|gb|EFU71474.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
upsaliensis JV21]
Length = 194
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 112/190 (58%), Positives = 149/190 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+E+T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+PQK+I L
Sbjct: 2 YIPYVIEKTSRGERSYDIYSRLLKDRIVMLSGEINDDVASSIVAQLLFLEAEDPQKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G K RFALPN+RI++
Sbjct: 62 YINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAKQKRFALPNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+++K LNEI +N + ++ K +RD MSA EA +
Sbjct: 122 HQPLGGARGQATDIEIQAKEILRLKTILNEILAQNTNQKIAKITKDTERDFFMSAVEAKE 181
Query: 198 WGVVDKVLMS 207
+G++DKVL
Sbjct: 182 YGLIDKVLEK 191
>gi|319778293|ref|YP_004129206.1| ATP-dependent Clp protease proteolytic subunit [Taylorella
equigenitalis MCE9]
gi|317108317|gb|ADU91063.1| ATP-dependent Clp protease proteolytic subunit [Taylorella
equigenitalis MCE9]
Length = 227
Score = 227 bits (580), Expect = 6e-58, Method: Composition-based stats.
Identities = 113/200 (56%), Positives = 155/200 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LG +P V+EQ+ RGER+YDIYSRLLKERI+F+ G++ + A L+ AQLLFLE+ENP+K+I
Sbjct: 28 LGYIPHVIEQSGRGERAYDIYSRLLKERIIFMVGEVNEQTANLVVAQLLFLESENPEKDI 87
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V AG+AIYDTMQF+ P +ST C G AASMG+LLL+AG +G R++LPN+RI
Sbjct: 88 SLYINSPGGGVYAGLAIYDTMQFVTPDVSTMCTGLAASMGALLLTAGAEGKRYSLPNSRI 147
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I+ ++ RLN I K+C K E + K +RD+ MS EA
Sbjct: 148 MIHQPLGGAKGQATDIEIQAREILDLRERLNRILSKHCDKDIEIIRKHTERDYYMSPEEA 207
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G++D V +R D+ ++
Sbjct: 208 LEFGLIDTVFTNRSDLNKEK 227
>gi|317968359|ref|ZP_07969749.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0205]
Length = 194
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 143/189 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VVEQ+ RG+R++DIYSRLL+ERI+F+ I+D +A + AQLLFLEAE+P+K+I +
Sbjct: 1 MLPTVVEQSGRGDRAFDIYSRLLRERIIFLGSGIDDQVADAMVAQLLFLEAEDPEKDIQI 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++
Sbjct: 61 YVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA DIE A++I+ +K LN + ++ G+ E++ + DRD+ +S +EA
Sbjct: 121 HQPLGGAQGQAVDIEIQAKEILYLKETLNGLMSEHTGQPLEKIAEDTDRDYFLSPAEAVQ 180
Query: 198 WGVVDKVLM 206
+G++D+V+
Sbjct: 181 YGLIDRVVT 189
>gi|259502747|ref|ZP_05745649.1| ATP-dependent Clp protease [Lactobacillus antri DSM 16041]
gi|312870316|ref|ZP_07730444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus oris PB013-T2-3]
gi|259169392|gb|EEW53887.1| ATP-dependent Clp protease [Lactobacillus antri DSM 16041]
gi|311094200|gb|EFQ52516.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus oris PB013-T2-3]
Length = 197
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 105/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDEMANSIVAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GMAIYDTM FIK + T +G AASM S+L+S+G KG RF LP++++
Sbjct: 61 YLYINSPGGVVTSGMAIYDTMNFIKSDVQTIVIGMAASMASVLVSSGTKGKRFGLPHSQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A +I+K ++ +NEI KN G+ E++ + +RDH ++A EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIAATEILKTRKMINEILAKNSGQPIEKINRDTERDHYLTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ + ++
Sbjct: 181 VDYGLLDGIMENNSSLK 197
>gi|160939893|ref|ZP_02087240.1| hypothetical protein CLOBOL_04784 [Clostridium bolteae ATCC
BAA-613]
gi|158437327|gb|EDP15092.1| hypothetical protein CLOBOL_04784 [Clostridium bolteae ATCC
BAA-613]
Length = 196
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQT RGERSYDIYSRLL +RI+F+ ++ D A+LI AQLLFLE+ +P K+I
Sbjct: 1 MSTIPYVIEQTGRGERSYDIYSRLLSDRIIFLGEEVSDTSASLIIAQLLFLESTDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG A+YDTMQ+IK +ST C+G AAS G+ LL+ G G R ALPN+ I
Sbjct: 61 QLYINSPGGSVTAGWAVYDTMQYIKCDVSTICLGLAASFGAFLLAGGAHGKRMALPNSEI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP+ G ASDI+ + + K ++RLN + N G++ EE+ + +RD+ MSA
Sbjct: 121 MIHQPAIHGNGIQGPASDIKIMSDYMQKSRQRLNRVLAVNTGRSEEEIARDTERDNFMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++D +L R
Sbjct: 181 EEALEYGLIDSILTRR 196
>gi|225025229|ref|ZP_03714421.1| hypothetical protein EIKCOROL_02126 [Eikenella corrodens ATCC
23834]
gi|224941987|gb|EEG23196.1| hypothetical protein EIKCOROL_02126 [Eikenella corrodens ATCC
23834]
Length = 206
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 159/197 (80%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ+ RGER++DIYSRLLKERI+F+ G + D A L+ AQLLFLE+ENP K+I L
Sbjct: 10 LVPTVIEQSGRGERAFDIYSRLLKERIIFLVGPVNDQTANLVVAQLLFLESENPDKDIFL 69
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGM+IYDTM FIKP +ST C+GQAASMG+ LLSAG +G RFALPN+R+++
Sbjct: 70 YINSPGGSVSAGMSIYDTMNFIKPDVSTLCLGQAASMGAFLLSAGAEGKRFALPNSRVMI 129
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQASDIE HA++++K+K +LN++ ++CG+T +E+E+ DRD+ MSA EA
Sbjct: 130 HQPLISGGLGGQASDIEIHAKELLKLKVKLNQLLAEHCGRTLDELERDTDRDNFMSAEEA 189
Query: 196 CDWGVVDKVLMSRIDIE 212
+G++D+VL SR DI+
Sbjct: 190 QAYGLIDQVLSSRSDIK 206
>gi|302342888|ref|YP_003807417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfarculus
baarsii DSM 2075]
gi|301639501|gb|ADK84823.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfarculus
baarsii DSM 2075]
Length = 198
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 119/195 (61%), Positives = 155/195 (79%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+EQT+RGERSYDIYSRLLK+RI+ + I+D++A ++ AQLLFLEAE+P K+
Sbjct: 1 MSSLIPFVIEQTSRGERSYDIYSRLLKDRIIILGQAIDDNVANVVTAQLLFLEAEDPNKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGVVTAGMAIYDTMQFIK P+ST CMGQAASM +LLL+AGE G R++LP AR
Sbjct: 61 IHLYINSPGGVVTAGMAIYDTMQFIKAPVSTLCMGQAASMAALLLAAGEPGKRYSLPKAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL+HQPSGG GQASDIE HA++I++++ LN I ++ G++ E++ +RD+ MS E
Sbjct: 121 ILIHQPSGGAQGQASDIEIHAREILRMREDLNNILAQHTGQSLEKIAADTERDYFMSGDE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +GV+DKV+ R
Sbjct: 181 AVAYGVIDKVISRRA 195
>gi|270290690|ref|ZP_06196914.1| Clp protease [Pediococcus acidilactici 7_4]
gi|304386215|ref|ZP_07368548.1| ATP-dependent Clp protease proteolytic subunit [Pediococcus
acidilactici DSM 20284]
gi|270280750|gb|EFA26584.1| Clp protease [Pediococcus acidilactici 7_4]
gi|304327572|gb|EFL94799.1| ATP-dependent Clp protease proteolytic subunit [Pediococcus
acidilactici DSM 20284]
Length = 197
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 101/197 (51%), Positives = 149/197 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D +A I +QLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDDLANSIISQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIK + T MG AASM S+L S+G KG RFALP++ +
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKADVQTIVMGMAASMASVLASSGTKGKRFALPHSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++IE A+ I+K ++ LN+I +N G+ E++ +RD+ +SA +A
Sbjct: 121 MIHQPSGGAQGQQTEIEIAAEQILKTRKELNKILAENSGQPLEKINLDTERDNYLSAQDA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ ++
Sbjct: 181 VDYGLIDGIMEKNASLK 197
>gi|227529566|ref|ZP_03959615.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
vaginalis ATCC 49540]
gi|227350525|gb|EEJ40816.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
vaginalis ATCC 49540]
Length = 197
Score = 227 bits (579), Expect = 7e-58, Method: Composition-based stats.
Identities = 105/197 (53%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDDMANSIVAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GMAIYDTM FIK + T +G AASM S+L+S+G KG RF LP++++
Sbjct: 61 YLYINSPGGVVTSGMAIYDTMNFIKSDVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A +I+K ++ +NEI KN G+ E++ + +RDH ++A EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIAATEILKTRKMINEILAKNSGQPIEKINRDTERDHYLTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ + ++
Sbjct: 181 VDYGLLDGIMENNSKLK 197
>gi|299529913|ref|ZP_07043341.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
gi|298722085|gb|EFI63014.1| ATP-dependent Clp protease proteolytic subunit [Comamonas
testosteroni S44]
Length = 201
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 117/196 (59%), Positives = 155/196 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQ+ RGERS+DIYSRLL++R++F+ G++ D ++ L+CAQLLFLEAENP K I
Sbjct: 5 MMLVPMVVEQSARGERSFDIYSRLLRDRVIFLNGEVNDAVSALVCAQLLFLEAENPDKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE G R A+PNA +
Sbjct: 65 HLYINSPGGVITSGLAMYDTMQFIKSPVHTLCMGTARSMGSFLLMAGEPGHRMAMPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQASDI HA+++++ K R+ +Y ++CG++Y+EVE+ LDRD M+A EA
Sbjct: 125 HVHQPLGGVRGQASDIRIHAEEMLRTKDRVTRLYAQHCGRSYQEVERDLDRDRFMTAKEA 184
Query: 196 CDWGVVDKVLMSRIDI 211
+WG++DKVL R
Sbjct: 185 REWGLIDKVLDRRTAT 200
>gi|326427885|gb|EGD73455.1| ATP-dependent Clp protease proteolytic subunit [Salpingoeca sp.
ATCC 50818]
Length = 267
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 158/193 (81%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+V+EQT+RGER+YDI+SRLL+ERIV + G + D +++LI AQLL+LE+ENP++ I
Sbjct: 58 SLVPIVIEQTHRGERAYDIFSRLLRERIVCLMGPVNDELSSLITAQLLYLESENPEETIH 117
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+ IYDTMQ++KP I+T C+GQA SMGSLLL+AG KG R+ALP++RI+
Sbjct: 118 MYINSPGGSVTAGLGIYDTMQYVKPKIATLCVGQACSMGSLLLTAGAKGHRYALPHSRIM 177
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI+ A++I+K+K + +IYV++ G+ + + +L+RD +SA EA
Sbjct: 178 VHQPSGGAYGQATDIQIQAEEILKLKNTICDIYVQHTGQPHSVIYDSLERDKFLSAGEAS 237
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ +R
Sbjct: 238 EFGLIDEVVATRK 250
>gi|103488219|ref|YP_617780.1| ATP-dependent Clp protease proteolytic subunit [Sphingopyxis
alaskensis RB2256]
gi|116243167|sp|Q1GPH5|CLPP_SPHAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|98978296|gb|ABF54447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sphingopyxis
alaskensis RB2256]
Length = 216
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 125/203 (61%), Positives = 166/203 (81%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
D LVP+VVEQT+RGERS+DI+SRLL+ERIVFVTG++ED+MA+LI AQLLFLE+ENP+
Sbjct: 3 DPLAALVPVVVEQTSRGERSFDIFSRLLRERIVFVTGEVEDNMASLIVAQLLFLESENPK 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGGVVTAGMAI+DTMQ+I+P + T C+GQAASMGS LL+AGE GMR AL N
Sbjct: 63 KDIYMYINSPGGVVTAGMAIHDTMQYIRPRVGTVCIGQAASMGSFLLAAGEPGMRVALTN 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR+++HQPSGG G ASDIE A++I++I++R+N++YVK GK+ +++EK +DRD + A
Sbjct: 123 ARVMVHQPSGGARGMASDIEIQAKEILRIRKRMNDLYVKYTGKSLKDIEKAMDRDTFLEA 182
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA ++G+VD V R +
Sbjct: 183 DEAKEFGIVDHVYDRRPALPGDD 205
>gi|269215646|ref|ZP_06159500.1| Clp protease [Slackia exigua ATCC 700122]
gi|269131133|gb|EEZ62208.1| Clp protease [Slackia exigua ATCC 700122]
Length = 255
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 136/193 (70%), Gaps = 2/193 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQ+ RGERSYDIYSRLL +RIVF+ I+D +A ++ AQLL LE+ +P+K+ISLY
Sbjct: 57 IPYVIEQSPRGERSYDIYSRLLNDRIVFLGDAIDDGVANIVVAQLLHLESSDPEKDISLY 116
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AG+AIYD MQFI+ +ST C+G AASM S+L +AG G RF PN++I++H
Sbjct: 117 INSPGGSVSAGLAIYDAMQFIRCDVSTVCLGMAASMASVLTAAGAPGKRFVTPNSQIMIH 176
Query: 139 QPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
QP GG + D + A ++ K + RL + + GKT E++ +RDH ++A EA
Sbjct: 177 QPMGGSGERTQQTDFDILANEMRKTRDRLEGLLATHTGKTVEQIHADSERDHWLTAEEAK 236
Query: 197 DWGVVDKVLMSRI 209
+G+VD ++ SR
Sbjct: 237 AYGLVDDIITSRA 249
>gi|119485223|ref|ZP_01619608.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
gi|119457451|gb|EAW38576.1| Peptidase S14, ClpP [Lyngbya sp. PCC 8106]
Length = 238
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 104/207 (50%), Positives = 152/207 (73%), Gaps = 2/207 (0%)
Query: 3 FEGCAKKD--SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
F+ ++K+ S + ++PMVVEQ+ GER++D+YSRLL++RI+F+ I+D +A +
Sbjct: 19 FQSVSQKEIHSTNPANVMIPMVVEQSGMGERAFDLYSRLLRDRIIFLGTAIDDEIANAVS 78
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFL+AE+P+K+I LYINSPGG VTAGM IYDT+Q ++P + T C G AASMG+ LLS
Sbjct: 79 AQMLFLDAEDPEKDIQLYINSPGGSVTAGMGIYDTIQQVRPDVVTICYGLAASMGAFLLS 138
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G KG R +LPN+R+++HQP GG GQA DIE A++I+ KR LNEI +N G+ E +
Sbjct: 139 SGTKGKRMSLPNSRVMIHQPLGGTQGQAVDIEIQAREILYHKRILNEILAQNTGQPIERI 198
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMS 207
E +RD MSA E+ ++G++D+V+
Sbjct: 199 EVDTERDFFMSAEESKEYGLIDQVISK 225
>gi|229828304|ref|ZP_04454373.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
gi|229792898|gb|EEP29012.1| hypothetical protein GCWU000342_00362 [Shuttleworthia satelles DSM
14600]
Length = 190
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 113/190 (59%), Positives = 149/190 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQ +RGERSYDIYSRLLK+RI+F+ + + A+LI AQLLFLE+E+P K+I LY
Sbjct: 1 MPYVIEQNSRGERSYDIYSRLLKDRIIFLGEDVNETTASLIVAQLLFLESEDPNKDIHLY 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGVVT GMAIYDTM +IKP +ST C+G AASMG+ LL+ G KG R+ALPNA I++H
Sbjct: 61 INSPGGVVTCGMAIYDTMNYIKPDVSTICIGMAASMGAFLLAGGAKGKRYALPNAEIMIH 120
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG GQA++IE A+ I+K KR++N+I N GKTYE+V +RDH + A EA ++
Sbjct: 121 QPSGGAKGQATEIEIAAESILKTKRKMNQILADNTGKTYEQVAADTERDHYLDAKEALEY 180
Query: 199 GVVDKVLMSR 208
G+VD+++ R
Sbjct: 181 GIVDQIIDHR 190
>gi|156741459|ref|YP_001431588.1| endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
gi|156232787|gb|ABU57570.1| Endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
Length = 219
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 96/200 (48%), Positives = 142/200 (71%), Gaps = 1/200 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMVVE TNRGER+YDIYSRLLKER++ + IED +A LI AQLLFLE E+P ++I
Sbjct: 19 SLIPMVVESTNRGERAYDIYSRLLKERVILLGTPIEDQIANLIVAQLLFLEHEDPDRDIW 78
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG +TAG+AIYDTMQ I+P ++T C+G A SM + +L+ G KG R++LP++ I
Sbjct: 79 LYINSPGGSITAGLAIYDTMQVIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIH 138
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H GG G A D+E A+++++ ++ + E+ K+ G+ E + + DRD M +A
Sbjct: 139 MHPAGGGARGYAPDVEIMARELLREQQLIRELLAKDTGQPLERIARDFDRDLFMDPQQAK 198
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
++G++D++L R D+ S+
Sbjct: 199 EYGIIDEILT-REDLPAASE 217
>gi|260654935|ref|ZP_05860423.1| Clp protease [Jonquetella anthropi E3_33 E1]
gi|260630250|gb|EEX48444.1| Clp protease [Jonquetella anthropi E3_33 E1]
Length = 195
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 105/190 (55%), Positives = 145/190 (76%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+EQT RGERSYDIYSRLLK+RI+F+ +I +A I AQ+LFLE++ P ++I LY
Sbjct: 6 IPYVIEQTGRGERSYDIYSRLLKDRIIFLGSEINSLVANSIVAQILFLESDQPDRDICLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VT+G+AIYDTM+++K IST +G AASM S+LL+AG G R ALPN+++++H
Sbjct: 66 INSPGGEVTSGLAIYDTMRYVKCDISTIVVGMAASMASILLAAGTPGKRIALPNSQVMIH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQASD+E HA++I+K ++RLNEI + G+ +E DRDH +SA+EA +
Sbjct: 126 QPMGGAYGQASDVEIHAREILKTRQRLNEILALHTGQPLSRIEVDTDRDHFLSAAEAQSY 185
Query: 199 GVVDKVLMSR 208
G+VD+V+ R
Sbjct: 186 GLVDRVIEKR 195
>gi|255523909|ref|ZP_05390872.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296185149|ref|ZP_06853559.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|255512340|gb|EET88617.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
gi|296049983|gb|EFG89407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
carboxidivorans P7]
Length = 194
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 112/194 (57%), Positives = 150/194 (77%), Gaps = 2/194 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+E TN GERSYDIYSRLLK+RI+ + G++ D A++I AQLLFLEA NP ++I
Sbjct: 1 MSYVPVVIEHTNSGERSYDIYSRLLKDRIIMLNGEVTDASASVIVAQLLFLEANNPDEDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +TAGMAIYDTMQ+IK +ST C+G AASMGS LL+AGE G R+ALPN+ I
Sbjct: 61 HFYINSPGGSITAGMAIYDTMQYIKSDVSTICVGMAASMGSFLLAAGEPGKRYALPNSEI 120
Query: 136 LLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
L+HQPS F GQA+DI+ H ++K K+++N+IY + GK E++EK ++RD+ MSA
Sbjct: 121 LIHQPSVYGGFQGQATDIKIHTDWLLKTKKKMNKIYSEKTGKPIEQIEKDMERDYFMSAK 180
Query: 194 EACDWGVVDKVLMS 207
EA ++G+VDK+L
Sbjct: 181 EAVEYGLVDKILSK 194
>gi|255323211|ref|ZP_05364346.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
gi|255299734|gb|EET79016.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
showae RM3277]
Length = 196
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 110/193 (56%), Positives = 152/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P V+E+T++GERSYDIYSRLLK+RI+ ++G+IED MA+ I AQ+LFLEAE+P K+
Sbjct: 1 MSYYIPYVIERTSKGERSYDIYSRLLKDRIIMLSGEIEDGMASAIVAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G R+ALPN+R
Sbjct: 61 IYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LN I KN G+ +++K DRD MS++E
Sbjct: 121 IMIHQPLGGARGQATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++DKVL
Sbjct: 181 AKEYGLIDKVLEK 193
>gi|196043546|ref|ZP_03110784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225864765|ref|YP_002750143.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|196025855|gb|EDX64524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|225789001|gb|ACO29218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
Length = 193
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNVIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|182679147|ref|YP_001833293.1| endopeptidase Clp [Beijerinckia indica subsp. indica ATCC 9039]
gi|182635030|gb|ACB95804.1| Endopeptidase Clp [Beijerinckia indica subsp. indica ATCC 9039]
Length = 217
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 139/207 (67%), Positives = 176/207 (85%), Gaps = 1/207 (0%)
Query: 5 GCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+D +++ L+P V+E T+RGER +DIYSRLL+ERI+F+TGQ+ED+MA++I AQL
Sbjct: 2 AMRDRDPIEIYDNYLIPQVIENTSRGERGFDIYSRLLRERIIFLTGQVEDNMASVIIAQL 61
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLEAENP+KEIS+YINSPGGVVTAG+AIYDTMQFI+P +ST C+GQAASMGSLLL AGE
Sbjct: 62 LFLEAENPKKEISMYINSPGGVVTAGLAIYDTMQFIRPKVSTLCVGQAASMGSLLLCAGE 121
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
GMR+A PN+RI++HQPSGGFSGQASDI RHA+DI+K+KRRLNEIYVK+ G+ Y+ +E T
Sbjct: 122 AGMRYATPNSRIMVHQPSGGFSGQASDILRHAEDIMKVKRRLNEIYVKHTGRDYDTIETT 181
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRID 210
LDRDH MSA E ++G++D V+ R D
Sbjct: 182 LDRDHFMSAQETKEFGIIDNVIDKRPD 208
>gi|172058408|ref|YP_001814868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sibiricum 255-15]
gi|171990929|gb|ACB61851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Exiguobacterium sibiricum 255-15]
Length = 192
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 115/190 (60%), Positives = 149/190 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+P V+EQTNRGER+YDIYSRLLK+RI+ + I+D++A + AQLLFL AE+P KEISL
Sbjct: 2 LIPTVIEQTNRGERAYDIYSRLLKDRIILLGSAIDDNVANSVVAQLLFLAAEDPDKEISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TAGMAIYDTM FIKP +ST C+G AASMG+ LL AG KG RFALPNA I++
Sbjct: 62 YINSPGGSITAGMAIYDTMNFIKPQVSTICIGMAASMGAFLLQAGAKGKRFALPNAEIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI+ HA+ I+K++ LN+I +N G+ E +E+ +RD+ MSA A D
Sbjct: 122 HQPLGGTQGQASDIKIHAERIIKMREHLNKIMAENTGQPLEVIERDTERDNFMSAQAAAD 181
Query: 198 WGVVDKVLMS 207
+G++D+V+
Sbjct: 182 YGLIDRVMER 191
>gi|225019943|ref|ZP_03709135.1| hypothetical protein CLOSTMETH_03897 [Clostridium methylpentosum
DSM 5476]
gi|224947307|gb|EEG28516.1| hypothetical protein CLOSTMETH_03897 [Clostridium methylpentosum
DSM 5476]
Length = 188
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 109/188 (57%), Positives = 150/188 (79%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGERSYDIYSRLL +RI+ ++ ++ D A+L+ AQLL+LEA++P+K+I LYIN
Sbjct: 1 MVVEQTSRGERSYDIYSRLLNDRIIMLSDEVNDATASLVVAQLLYLEAQDPEKDIQLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG +T+GMAIYDTM +IK +ST C+G AASMG+ LLSAG KG R ALPN+ I++HQP
Sbjct: 61 SPGGSITSGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSAGAKGKRLALPNSEIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG GQA+DI A+ I+K+K++LN++ G+ E++E+ +RD+ MSA EAC++G+
Sbjct: 121 SGGAQGQATDINIQAERIIKMKKQLNQMLADATGQPLEKIERDTERDNFMSAQEACEYGL 180
Query: 201 VDKVLMSR 208
VDKV+ R
Sbjct: 181 VDKVIEKR 188
>gi|297748837|gb|ADI51383.1| hypothetical protein CTDEC_0706 [Chlamydia trachomatis D-EC]
gi|297749717|gb|ADI52395.1| hypothetical protein CTDLC_0706 [Chlamydia trachomatis D-LC]
Length = 209
Score = 227 bits (579), Expect = 8e-58, Method: Composition-based stats.
Identities = 100/203 (49%), Positives = 151/203 (74%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P
Sbjct: 4 STHMTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPT 63
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I ++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP+
Sbjct: 64 KDIQIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPH 123
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQPSGG G ++DI+ A +I+ +K+ L+ I + G++ E++ + +RD M A
Sbjct: 124 SRMMIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGA 183
Query: 193 SEACDWGVVDKVLMSRIDIEEKS 215
EA +G++DKV+ S + ++KS
Sbjct: 184 EEAIAYGLIDKVISSAKETKDKS 206
>gi|256848088|ref|ZP_05553532.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
coleohominis 101-4-CHN]
gi|256715148|gb|EEU30125.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
coleohominis 101-4-CHN]
Length = 197
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 151/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDDMANSIVAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GMAIYDTM FIK + T +G AASM S+L+S+G KG RF LP++++
Sbjct: 61 YLYINSPGGVVTSGMAIYDTMNFIKADVQTIVIGMAASMASVLVSSGAKGKRFGLPHSQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A +I+K ++ +NEI +N G+ E++ + +RDH ++A EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIAATEILKTRKMINEILAENSGQPIEKINQDTERDHYLTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ ++ +
Sbjct: 181 VDYGLLDGIMENKPKAD 197
>gi|190570982|ref|YP_001975340.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213019499|ref|ZP_03335305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|226706556|sp|B3CLB1|CLPP_WOLPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|190357254|emb|CAQ54678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212994921|gb|EEB55563.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 208
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 119/197 (60%), Positives = 168/197 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQT+RGER+YDIYSRL+KERI+FVTG IED+MA++I AQLLFLE+ENP K+I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+I P +ST C+GQAASMGSLLL+AG +G R++LP++RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLTAGAEGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA +I+++K++LN+IY K+ G + +++E+ ++RD M EA
Sbjct: 121 MIHQPSGGYHGQATDIEIHANEILRVKKKLNQIYEKHTGNSLKKIEEMMERDKFMDPEEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
G++D+V+ R D++
Sbjct: 181 MKTGLIDRVIAERKDMK 197
>gi|228901328|ref|ZP_04065521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228858306|gb|EEN02773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
Length = 198
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 YLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDDVVTKK 198
>gi|261415786|ref|YP_003249469.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372242|gb|ACX74987.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326653|gb|ADL25854.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 196
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 147/193 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E T RGER+YDIYSRLLKERI+F+ I D +A + AQL+FLE ENP+K+I+L
Sbjct: 2 IIPTVIETTGRGERAYDIYSRLLKERIIFLGTPINDEVANNVMAQLIFLEYENPEKDITL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AIYDTMQ ++P I+T C+G ASM ++LL+AG KG R+ALP++RI+L
Sbjct: 62 YINSPGGYVSAGLAIYDTMQHVRPNIATICIGSCASMAAVLLAAGTKGKRYALPHSRIML 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSG +GQ++DI+ A++I++ K L EI K+ GK +EV + DRD MS EA
Sbjct: 122 HQPSGAATGQSTDIQITAKEIIRTKDTLTEIVAKHTGKPVDEVREKTDRDFYMSPEEAKA 181
Query: 198 WGVVDKVLMSRID 210
+GV+D++ + R +
Sbjct: 182 FGVIDEIFVPRKE 194
>gi|229070268|ref|ZP_04203518.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228712832|gb|EEL64757.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
Length = 198
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 103/194 (53%), Positives = 137/194 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKYDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V+
Sbjct: 181 KAYGIVDNVVTKNK 194
>gi|118602249|ref|YP_903464.1| ATP-dependent Clp protease proteolytic subunit [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
gi|166214707|sp|A1AVN6|CLPP_RUTMC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118567188|gb|ABL01993.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)]
Length = 198
Score = 227 bits (578), Expect = 9e-58, Method: Composition-based stats.
Identities = 122/193 (63%), Positives = 161/193 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L +P+VVEQ+ RGER+YDIYSRLLKERI+F+ G IED+MA ++ AQLLFLE+ENP ++I
Sbjct: 6 LNQIPIVVEQSARGERAYDIYSRLLKERIIFLVGPIEDYMANVVVAQLLFLESENPDQDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG+V+AG+AIYDTMQFIKP +ST C+GQAASMG+LLL+AG K RFALPN R
Sbjct: 66 HLYINSPGGLVSAGLAIYDTMQFIKPDVSTLCIGQAASMGALLLTAGAKDKRFALPNVRC 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGFSGQASDI+ HAQ+I+K++ +LN+I+ + +T + ++K DRD+ MSA+EA
Sbjct: 126 MIHQPLGGFSGQASDIDIHAQEILKVREKLNQIFKLHTSQTIKTIQKDTDRDNFMSANEA 185
Query: 196 CDWGVVDKVLMSR 208
+G++DKVL R
Sbjct: 186 TKYGLIDKVLAKR 198
>gi|17981474|gb|AAL51031.1|AF454758_1 ClpP2 [Bacillus thuringiensis]
gi|326940559|gb|AEA16455.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 193
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDDVVTKK 193
>gi|58584810|ref|YP_198383.1| protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont strain TRS of Brugia malayi]
gi|67460156|sp|Q5GS83|CLPP_WOLTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58419126|gb|AAW71141.1| Protease subunit of ATP-dependent Clp protease [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 208
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 120/197 (60%), Positives = 168/197 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+V+EQT+RGER+YDIYSRL+KERI+FVTG +ED+MA++I AQLLFLE+ENP K+I
Sbjct: 1 MTLIPIVIEQTSRGERAYDIYSRLVKERIIFVTGPVEDNMASVIVAQLLFLESENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAASMGSLLL+AG +G R++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLSIYDTMQYIKPDVSTLCIGQAASMGSLLLAAGTEGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA +I+++KR+LN+IY K+ G + +++E ++RD M EA
Sbjct: 121 MIHQPSGGYQGQATDIEIHANEILRVKRKLNQIYEKHTGNSLKKIEGMMERDKFMDPEEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
G++D+V+ R DI+
Sbjct: 181 RRIGLIDRVIAERKDIK 197
>gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 147/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+P V E+T+ GER YDIYS+LL +RI+F+ I + +A L+ AQ+LFLEA++P ++I L
Sbjct: 8 LIPTVTERTSHGERVYDIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNRDIYL 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG+VTAG+AIYDTMQ++K P++T C GQAASM +++L+AGE+G R+ LPN+R+L+
Sbjct: 68 YINSPGGIVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRYCLPNSRVLI 127
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DI A++I+K+K LN+I K+ GK +++ +RD M A +A +
Sbjct: 128 HQPLGGAEGQATDIAIQAKEILKVKDTLNQILAKHTGKNITKIKNDTERDFYMDAKQAKE 187
Query: 198 WGVVDKVLMSRI 209
+G+VD++L R
Sbjct: 188 YGIVDEILEKRE 199
>gi|327264015|ref|XP_003216812.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Anolis carolinensis]
Length = 266
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 115/209 (55%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+S C + + L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+
Sbjct: 32 LSVSRCLHQSPRNHI-PLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDGVASLVI 90
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++E+ +K I +YINSPGG VT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+
Sbjct: 91 AQLLFLQSESNKKPIHMYINSPGGTVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLA 150
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG GMR +LPN+RI++HQPSGG GQA+DI A++I+K+K+++N IY K+ + E +
Sbjct: 151 AGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQINGIYAKHTKQNLEVI 210
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E ++RD MS EA ++G++DKVL+
Sbjct: 211 EAAMERDRYMSPVEAQEFGILDKVLVHPP 239
>gi|159903385|ref|YP_001550729.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159888561|gb|ABX08775.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9211]
Length = 196
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTNDSANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DT++ +KP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTIEHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLKHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + G+ E + + DRD MS EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKDRLNNELAERTGQPIERISQDTDRDFYMSPDEALE 180
Query: 198 WGVVDKVLMSRI 209
+G++D + R
Sbjct: 181 YGIIDNIFNKRP 192
>gi|229079979|ref|ZP_04212510.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229179074|ref|ZP_04306431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228604442|gb|EEK61906.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228703358|gb|EEL55813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
Length = 193
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDNVVTKK 193
>gi|153209299|ref|ZP_01947334.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coxiella
burnetii 'MSU Goat Q177']
gi|154706302|ref|YP_001424146.1| ATP-dependent Clp protease proteolytic subunit [Coxiella burnetii
Dugway 5J108-111]
gi|165924012|ref|ZP_02219844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coxiella
burnetii RSA 334]
gi|212212797|ref|YP_002303733.1| ATP-dependent Clp protease proteolytic subunit [Coxiella burnetii
CbuG_Q212]
gi|212219038|ref|YP_002305825.1| ATP-dependent Clp protease proteolytic subunit [Coxiella burnetii
CbuK_Q154]
gi|189082453|sp|A9KDS6|CLPP_COXBN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706447|sp|B6J8W4|CLPP_COXB1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706448|sp|B6J0W0|CLPP_COXB2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120575415|gb|EAX32039.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coxiella
burnetii 'MSU Goat Q177']
gi|154355588|gb|ABS77050.1| ATP-dependent endopeptidase clp proteolytic subunit [Coxiella
burnetii Dugway 5J108-111]
gi|165916535|gb|EDR35139.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coxiella
burnetii RSA 334]
gi|212011207|gb|ACJ18588.1| ATP-dependent endopeptidase clp proteolytic subunit [Coxiella
burnetii CbuG_Q212]
gi|212013300|gb|ACJ20680.1| ATP-dependent endopeptidase clp proteolytic subunit [Coxiella
burnetii CbuK_Q154]
Length = 195
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 148/195 (75%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDIYSRLLK+R++F+ GQ+EDHMA L AQ+LFLE+ENP K+
Sbjct: 1 MSVLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VT+ MAIYDTMQF+KP + T C+GQAAS G+LLL+ G KG R LP++
Sbjct: 61 INLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSS 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQ GG+ GQ +DI+ HA+ ++ +LN+I K+ GK E VEK +RD+ ++ E
Sbjct: 121 VMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D + R
Sbjct: 181 AVEYGLIDSIFTERP 195
>gi|302337810|ref|YP_003803016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
gi|301634995|gb|ADK80422.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Spirochaeta
smaragdinae DSM 11293]
Length = 205
Score = 227 bits (578), Expect = 1e-57, Method: Composition-based stats.
Identities = 114/204 (55%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP VVEQT GERSYDI+SRLLK+RIVF+ G+I D A L+ AQLLFLE+ +P+
Sbjct: 3 EQMNNLVPYVVEQTGVGERSYDIFSRLLKDRIVFLDGEINDATADLVVAQLLFLESLDPE 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ISLYINSPGG VTAG+AIYDT+Q+IKP + T CMGQAASM +L+L+ G G RFALP+
Sbjct: 63 RDISLYINSPGGSVTAGLAIYDTIQYIKPDVQTICMGQAASMAALMLTCGSTGKRFALPS 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RIL+HQP GG GQA DI A++IV++K+ + ++ GK E + + L+RD+ +SA
Sbjct: 123 SRILIHQPWGGAQGQAVDIGIQAKEIVRLKQLTIRYFSQHTGKGEEVIARDLERDYFLSA 182
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
EA +G++DKVL+ R EK K
Sbjct: 183 EEAVAYGIIDKVLV-REKNGEKQK 205
>gi|294500553|ref|YP_003564253.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294350490|gb|ADE70819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
Length = 193
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 144/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ+NRGERSYDIYSRLLK+RI+ + +I DH+A + AQLLFL A++P+K+I
Sbjct: 1 MSTIPYVIEQSNRGERSYDIYSRLLKDRIILIGDEINDHIANSVVAQLLFLAADDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +AG AIYDTMQ+I+P + T C G AAS G+LLL AG KG R+ALPN+ I
Sbjct: 61 SLYINSPGGSTSAGFAIYDTMQYIEPDVQTICTGMAASFGALLLLAGAKGKRYALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K+ +NEI G+ E+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATEIEISARRILKLKQHINEIISTRTGQPVEKVANDTERDYFMSAEEA 180
Query: 196 CDWGVVDKVL 205
++GV+D +L
Sbjct: 181 KEYGVIDGIL 190
>gi|124013820|sp|Q2RZ59|CLPP2_SALRD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 233
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 146/195 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ GLVPMVVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQLL+L +E+
Sbjct: 15 DQPMSGLVPMVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQLLYLASESS 74
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGGV+ +G+ +YDTMQ+I P+ST C+G AASMGS+LL+AGE R LP
Sbjct: 75 EKPINLYINSPGGVIYSGLGVYDTMQYIGAPVSTICVGLAASMGSVLLAAGEDDSRACLP 134
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+R+++HQP GG GQASDIE A++I+ +K RL EI + G+ +++E DR++ MS
Sbjct: 135 NSRVMIHQPMGGAEGQASDIEIQAEEIMWLKERLYEILALHTGQDIDQIEADADRNYWMS 194
Query: 192 ASEACDWGVVDKVLM 206
A EA ++G+VD VL
Sbjct: 195 AEEAEEYGLVDNVLN 209
>gi|152975675|ref|YP_001375192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus subsp. cytotoxis NVH 391-98]
gi|152024427|gb|ABS22197.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 194
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 139/194 (71%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+
Sbjct: 1 MMNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+
Sbjct: 61 IFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGLAASFGALLLLSGTKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA++IE A+ I+K+K+ +N I G+ E+V + +RD+ M+A E
Sbjct: 121 IMIHQPLGGAKGQATEIEITAKRILKLKQDINNIISDRTGQPIEKVARDTERDYFMTAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G+VD V+ +
Sbjct: 181 AKTYGIVDAVITKK 194
>gi|228908533|ref|ZP_04072373.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228965727|ref|ZP_04126807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|229097304|ref|ZP_04228266.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229103392|ref|ZP_04234074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229116300|ref|ZP_04245690.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228667132|gb|EEL22584.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228679888|gb|EEL34083.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228686115|gb|EEL40031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228793986|gb|EEM41509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228851086|gb|EEM95900.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
Length = 193
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 YLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDDVVTKK 193
>gi|283779543|ref|YP_003370298.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pirellula
staleyi DSM 6068]
gi|283437996|gb|ADB16438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pirellula
staleyi DSM 6068]
Length = 205
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 105/194 (54%), Positives = 148/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P VVE++ R ER YDIYSRLLK+RI+F+ Q+ D MA I AQ+LFL++++P+ +I
Sbjct: 1 MPLIPYVVEKSGREERVYDIYSRLLKDRIIFLGTQVNDEMANAIVAQMLFLQSDDPKADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTMQF+ ++T+C+GQAASMG++LL+AG G RFALPNARI
Sbjct: 61 HLYINSPGGSISAGMAIYDTMQFVTCDVATYCIGQAASMGAVLLTAGAPGKRFALPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G G A +I HA++ +IK+R+NEI +K+ G+ E++E DRD MSA+EA
Sbjct: 121 MIHQPLAGMQGTAEEIMIHAKEFRRIKQRMNEIMLKHTGQPMEKIESDTDRDRFMSAAEA 180
Query: 196 CDWGVVDKVLMSRI 209
++ +VDKV+
Sbjct: 181 AEYRIVDKVIERMP 194
>gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 218
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 97/191 (50%), Positives = 144/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++P V+EQ+ +G+R++DIYSRLL+ERI+F+ + D +A + AQ+LFLEA++P+K+I
Sbjct: 24 GVLPTVIEQSGQGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQ 83
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LY+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPN+RI+
Sbjct: 84 LYVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIM 143
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +IE A++I+ +K LN + ++ G+ +++ + DRDH +S EA
Sbjct: 144 IHQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAV 203
Query: 197 DWGVVDKVLMS 207
++G++DKV+ +
Sbjct: 204 EYGLIDKVVSN 214
>gi|118478148|ref|YP_895299.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|118417373|gb|ABK85792.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
Length = 198
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNVIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|291460376|ref|ZP_06599766.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oribacterium
sp. oral taxon 078 str. F0262]
gi|291416943|gb|EFE90662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Oribacterium
sp. oral taxon 078 str. F0262]
Length = 209
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 107/209 (51%), Positives = 156/209 (74%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ S+ + +P V++ T+RGERSYDI+SRLL ERIVF+ ++ + A+L+ AQLL+L
Sbjct: 1 MRDFSDPRGIATIPYVIQSTSRGERSYDIFSRLLNERIVFLGDEVNNDTASLVVAQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+E+P K++SLYINSPGGV+TAGMAIYDTMQ+IK +ST C+G AASMG+ LL+ G KG
Sbjct: 61 ESEDPDKDVSLYINSPGGVITAGMAIYDTMQYIKCDVSTICVGMAASMGAFLLAGGTKGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R LPNA +++HQPSGG GQA++I+ A+ I++ K+ + EI +NCG++ E+V + +R
Sbjct: 121 RMILPNAEVMIHQPSGGAQGQATEIQITAEWILRTKKHMAEILAENCGQSLEKVLEDTER 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKS 215
DH M A +A +G+VD++ SR + E K+
Sbjct: 181 DHWMDAEQALSYGLVDRIFRSRGESEGKA 209
>gi|157370220|ref|YP_001478209.1| ATP-dependent Clp protease proteolytic subunit [Serratia
proteamaculans 568]
gi|157321984|gb|ABV41081.1| Endopeptidase Clp [Serratia proteamaculans 568]
Length = 197
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 122/193 (63%), Positives = 153/193 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQT++GERS+DIYSRLL++RIVF+ G++ D +A ++CAQLLFLEAENP+K I
Sbjct: 5 MLLVPMVVEQTSQGERSFDIYSRLLRDRIVFLNGEVNDQIAEVLCAQLLFLEAENPEKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G AIYDTM +I P+ T CMG A SMGS LL AGE G R LPNA +
Sbjct: 65 HLYINSPGGVITSGFAIYDTMNYINAPVHTLCMGTARSMGSFLLMAGEAGHRMVLPNASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GGF GQASDI HA+++ + K + +Y K+CG++YEEVE+ LDRDH MSA EA
Sbjct: 125 HVHQPLGGFQGQASDILIHAEEMKRTKHSVITLYAKHCGRSYEEVERALDRDHFMSADEA 184
Query: 196 CDWGVVDKVLMSR 208
+WG+VDKVL R
Sbjct: 185 VEWGLVDKVLRGR 197
>gi|115374393|ref|ZP_01461676.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|310824399|ref|YP_003956757.1| ATP-dependent CLP protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
gi|115368595|gb|EAU67547.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|309397471|gb|ADO74930.1| ATP-dependent Clp protease proteolytic subunit 2 [Stigmatella
aurantiaca DW4/3-1]
Length = 200
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 107/189 (56%), Positives = 152/189 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E ++RGER+YD+YSRLLK+RI+ + I D +A ++ AQ+LFLE+E+P+K I++Y
Sbjct: 3 IPFVIETSHRGERAYDLYSRLLKDRIIMLGVPINDEVANVVVAQMLFLESEDPEKGINIY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ++K P+ST C+GQAASMG+LLL AG KG R+ALPNARI++H
Sbjct: 63 INSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGALLLLAGSKGKRYALPNARIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DI+ A++I+++K LN I VK+ G T E +EK +RD+ MSA +A +
Sbjct: 123 QPLGGAQGQATDIDIQAKEILRLKAYLNGIIVKHTGHTIERIEKDTERDYFMSADDARQY 182
Query: 199 GVVDKVLMS 207
G++D+V++
Sbjct: 183 GIIDEVVVK 191
>gi|15834704|ref|NP_296463.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Nigg]
gi|270284870|ref|ZP_06194264.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Nigg]
gi|270288897|ref|ZP_06195199.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Weiss]
gi|301336249|ref|ZP_07224451.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
MopnTet14]
gi|14194531|sp|Q9PLM0|CLPP2_CHLMU RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7190114|gb|AAF38961.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydia
muridarum Nigg]
Length = 203
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 99/200 (49%), Positives = 150/200 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+
Sbjct: 61 QIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L+ I + G+ E++ + +RD M A EA
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQPVEKIIEDSERDFFMGAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S + ++K+
Sbjct: 181 IAYGLIDKVVSSAKETKDKN 200
>gi|228939909|ref|ZP_04102486.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228972800|ref|ZP_04133399.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228979383|ref|ZP_04139719.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228780387|gb|EEM28618.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228787015|gb|EEM34995.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228819840|gb|EEM65888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 198
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDDVVTKK 198
>gi|229091793|ref|ZP_04222992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228691575|gb|EEL45329.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
Length = 193
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DT+ IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTINLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|229586800|ref|YP_002845301.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
gi|228021850|gb|ACP53558.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia africae
ESF-5]
Length = 216
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 126/199 (63%), Positives = 164/199 (82%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAEN
Sbjct: 11 QEKILMSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAEN 70
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++L
Sbjct: 71 PKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSL 130
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ M
Sbjct: 131 PHSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFM 190
Query: 191 SASEACDWGVVDKVLMSRI 209
S EA +G+VD +L SR
Sbjct: 191 SPEEAKKFGLVDNILSSRD 209
>gi|116492258|ref|YP_803993.1| ATP-dependent Clp protease proteolytic subunit [Pediococcus
pentosaceus ATCC 25745]
gi|122266278|sp|Q03GX1|CLPP_PEDPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116102408|gb|ABJ67551.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pediococcus
pentosaceus ATCC 25745]
Length = 197
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 149/197 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D +A I +QLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDDLANSIISQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIK + T MG AASM S+L S+G KG RFALP++ +
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPHSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++IE A+ I+K ++ LN I +N G+ E++ +RD+ +SA +A
Sbjct: 121 MIHQPSGGAQGQQTEIEIAAEQILKTRKELNTILAENSGQPLEKINIDTERDNYLSAQDA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
++G++D ++ +++
Sbjct: 181 VEYGLIDGIMEKNANLK 197
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 114/202 (56%), Positives = 153/202 (75%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ L+PMVVEQT R ER+YDIYSRLLKERIVF+ I+D +++LI AQ LFLE
Sbjct: 1 MAKHQNEIAQLIPMVVEQTGRTERAYDIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE+P K+I LYINSPGG +TAGMAI+DTM +IKP ++T CMGQA+SMG+ LL+ G+KG R
Sbjct: 61 AEDPDKDIYLYINSPGGYITAGMAIFDTMNYIKPDVATICMGQASSMGAFLLAGGKKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+RI++HQP GG GQASDI+ A +I++++ +LN++ K G+ +VEK DR+
Sbjct: 121 SALPNSRIMIHQPMGGAEGQASDIKIQADEIIRLRGKLNKLLAKQTGQKISKVEKDSDRN 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA EA +G++D VL SR
Sbjct: 181 YFMSAVEAKKYGIIDTVLESRK 202
>gi|94498801|ref|ZP_01305347.1| ATP-dependent Clp protease [Sphingomonas sp. SKA58]
gi|94421730|gb|EAT06785.1| ATP-dependent Clp protease [Sphingomonas sp. SKA58]
Length = 211
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 125/210 (59%), Positives = 167/210 (79%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D LVP+V+EQ+NRGERS+DI+SRLL+ERI+FVTGQ+EDHMA+LI AQLLFL
Sbjct: 1 MTDIMSDPMAALVPIVIEQSNRGERSFDIFSRLLRERIIFVTGQVEDHMASLIVAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ENP+K+I +YINSPGGVVT+GMAI+DTM++I+P + T C+GQAASMGS LL+AGE G
Sbjct: 61 ESENPKKDIWMYINSPGGVVTSGMAIHDTMKYIRPQVGTVCIGQAASMGSFLLAAGEPGK 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R AL NARI++HQPSGG G ASDIE A++I++I+RRLN++YV+ G+T E VE+ +DR
Sbjct: 121 RIALSNARIMVHQPSGGAQGMASDIEIQAKEILRIRRRLNDLYVQYTGQTLEAVERAMDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D + A EA +G+VD+V R + + ++
Sbjct: 181 DTFLEADEAKAFGLVDEVFDRRPQMADPNE 210
>gi|42781876|ref|NP_979123.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
gi|67460501|sp|Q736T1|CLPP1_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|42737800|gb|AAS41731.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
Length = 193
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 101/193 (52%), Positives = 136/193 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG AG AI D M I P + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTXAGFAILDXMNLIXPEVQTLCMGLAASFGALLLLAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I G+ E++ +RD+ M+A EA
Sbjct: 121 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIIADRTGQPIEKIAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDGVVEKK 193
>gi|241116836|ref|XP_002401631.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
gi|215493175|gb|EEC02816.1| ATP-dependent Clp protease, proteolytic subunit, putative [Ixodes
scapularis]
Length = 205
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 124/205 (60%), Positives = 167/205 (81%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + + VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHM LI AQLLFLEAENP
Sbjct: 1 EKILMSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I +YINSPGGV+TAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP
Sbjct: 61 KKDIYMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ MS
Sbjct: 121 HSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQELKHIEKSMERDNFMS 180
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
EA +G++D ++ SR + +K
Sbjct: 181 PEEAKKFGIIDNIISSRDAMTMSAK 205
>gi|168701667|ref|ZP_02733944.1| ATP-dependent clp protease proteolytic subunit [Gemmata
obscuriglobus UQM 2246]
Length = 205
Score = 226 bits (577), Expect = 1e-57, Method: Composition-based stats.
Identities = 108/194 (55%), Positives = 151/194 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+VVE R ER+YDIYSRLLK+RI+F+ G ++D MA LI AQ+L+L+ E+P+++I
Sbjct: 1 MPLVPIVVESRGREERAYDIYSRLLKDRIIFMQGVVQDDMANLIVAQMLYLQFEDPKRDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG VTAGMAIYDTMQFI ++T+C+GQAASMG++LL+AG KG R+ALP+AR+
Sbjct: 61 SLYINSPGGSVTAGMAIYDTMQFITCDVATYCIGQAASMGAMLLTAGTKGKRYALPHARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPS G G A +I HA++ ++ K LN++ +CG+ E++ K DRD+ MSA EA
Sbjct: 121 MIHQPSAGSEGTAEEILIHAKEFLRTKETLNKLMADHCGQPVEKILKGTDRDNFMSAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++DKVL
Sbjct: 181 REFGLIDKVLERMP 194
>gi|15604378|ref|NP_220894.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii str. Madrid E]
gi|6225160|sp|Q9ZD29|CLPP_RICPR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|3861070|emb|CAA14970.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT (clpP) [Rickettsia
prowazekii]
gi|292572133|gb|ADE30048.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
prowazekii Rp22]
Length = 201
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 125/196 (63%), Positives = 164/196 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPVVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQFIKP ++T C+GQA SMGSLLL GE GMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA++ +KIKR LNE+Y K+ + + +EK+++RD+ MS+ EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHARETLKIKRLLNELYSKHTKQELKYIEKSMERDNFMSSEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G+VD ++ SR I
Sbjct: 181 KKFGLVDNIISSRDTI 196
>gi|94676878|ref|YP_588715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
gi|116243128|sp|Q1LTJ9|CLPP_BAUCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94220028|gb|ABF14187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Baumannia
cicadellinicola str. Hc (Homalodisca coagulata)]
Length = 205
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 125/193 (64%), Positives = 165/193 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVE+T RGERSYDI+SRLLKERI+F+TG++ED+MA +I AQ++FLEAENP+K+I
Sbjct: 12 MALVPMVVERTLRGERSYDIFSRLLKERIIFMTGKVEDYMANIIVAQMIFLEAENPEKDI 71
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +T+GM+IYDTMQFIKP +STFCMGQAASMG+ LL+AG KG RF LPNAR+
Sbjct: 72 YLYINSPGGNITSGMSIYDTMQFIKPNVSTFCMGQAASMGAFLLAAGTKGKRFCLPNARM 131
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GGF GQA+DI+ HA++I+K+K R+NE+ K+ GKT + +E+ +RD +SA+EA
Sbjct: 132 MIHQPMGGFQGQATDIQIHAKEILKVKNRMNELMAKHIGKTLQVIEQDTERDRFLSANEA 191
Query: 196 CDWGVVDKVLMSR 208
D+G+VD +L R
Sbjct: 192 VDYGLVDAILSHR 204
>gi|223040072|ref|ZP_03610353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
gi|222878658|gb|EEF13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
rectus RM3267]
Length = 196
Score = 226 bits (576), Expect = 1e-57, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 152/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P V+E+T++GERSYDIYSRLLK+RI+ ++G+IED +A+ I AQ+LFLEAE+P K+
Sbjct: 1 MSYYIPYVIERTSKGERSYDIYSRLLKDRIIMLSGEIEDGIASAIVAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G R+ALPN+R
Sbjct: 61 IYLYINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAQGKRYALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K LN I KN G+ +++K DRD MS++E
Sbjct: 121 IMIHQPLGGARGQATDIEIQAKEILRMKEILNAILAKNTGQKLAKIQKDTDRDFFMSSAE 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++DKVL
Sbjct: 181 AKEYGLIDKVLEK 193
>gi|210634106|ref|ZP_03297994.1| hypothetical protein COLSTE_01912 [Collinsella stercoris DSM 13279]
gi|210158957|gb|EEA89928.1| hypothetical protein COLSTE_01912 [Collinsella stercoris DSM 13279]
Length = 206
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 146/195 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
LVP V+EQT RGERSYDIYSRLL +RIVF+ ++ A L+ AQLL LE+++ +K+I
Sbjct: 7 SALVPYVIEQTPRGERSYDIYSRLLNDRIVFLGEEVNSVTANLVIAQLLHLESQDAEKDI 66
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V +G+AI DTM +IKP +ST C+G AASM ++LL+ G KG RF+LP+++I
Sbjct: 67 SLYINSPGGEVYSGLAILDTMNYIKPDVSTICVGMAASMAAVLLAGGAKGKRFSLPHSKI 126
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++IE A++I + + LN+I GK +++VE+ +RD+ + A +A
Sbjct: 127 MIHQPSGGAQGQQTEIEIAAREIRETRTTLNQILADATGKPFDQVERDTERDNYLRAEQA 186
Query: 196 CDWGVVDKVLMSRID 210
++G++D+++ SR D
Sbjct: 187 LEYGLIDRIVSSRSD 201
>gi|207091734|ref|ZP_03239521.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
HPKX_438_AG0C1]
Length = 194
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 113/195 (57%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I N G++ E++ K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEILRLKGLMNSILA-NSGQSLEQIAKDTDRDFYMSAKEA 179
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 180 KEYGLIDKVLQKNVK 194
>gi|148553517|ref|YP_001261099.1| ATP-dependent Clp protease proteolytic subunit [Sphingomonas
wittichii RW1]
gi|148498707|gb|ABQ66961.1| Endopeptidase Clp [Sphingomonas wittichii RW1]
Length = 218
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 119/199 (59%), Positives = 160/199 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+V+EQ+NRGERS+DIYSRLL+ERI+FVTGQ+EDHMA+LI AQLLFLE+ENP+K+I
Sbjct: 17 ALVPVVIEQSNRGERSFDIYSRLLRERIIFVTGQVEDHMASLITAQLLFLESENPKKDIF 76
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGGVVTAG+AI+DTMQ+I+P + T C+GQAASMGS LL+AGE GMR AL N+RI+
Sbjct: 77 MYINSPGGVVTAGLAIHDTMQYIRPRVGTVCIGQAASMGSFLLAAGEPGMRVALTNSRIM 136
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+DIE A++I++++ RLN +Y K + E +E +DRD + A EA
Sbjct: 137 VHQPSGGAQGMAADIEIQAREILRMRHRLNSLYAKYTKQPIEAIEAAMDRDKFLEADEAK 196
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G++D+V R +++
Sbjct: 197 AFGLIDEVFDKRPSPADEA 215
>gi|308798991|ref|XP_003074276.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
gi|116000447|emb|CAL50127.1| COG0515: Serine/threonine protein kinase (ISS) [Ostreococcus tauri]
Length = 742
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 154/199 (77%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQTNRGER +DIYSRLLKERIVF+ G I+D ++L AQLLFLE+ +P I
Sbjct: 544 ALVPMVLEQTNRGERVFDIYSRLLKERIVFINGPIDDTASSLAVAQLLFLESASPTAPIW 603
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG VTAG+ IYDTMQ++ PPI T C+GQA+SM SLLL+AG KG R +LPN+R++
Sbjct: 604 MYVNSPGGSVTAGLGIYDTMQYVSPPIHTLCVGQASSMASLLLAAGAKGERRSLPNSRVM 663
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
LHQPSGG SGQASDI HAQ+I+ ++ +L IY+K+ + Y+++ TL+RD MS S+A
Sbjct: 664 LHQPSGGASGQASDIAIHAQEILNVREKLIHIYMKHTNQEYDKIGMTLERDTFMSPSDAL 723
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++D+V+ R ++
Sbjct: 724 EFGLIDEVIEHRAAATKEE 742
>gi|164687878|ref|ZP_02211906.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM
16795]
gi|164603153|gb|EDQ96618.1| hypothetical protein CLOBAR_01523 [Clostridium bartlettii DSM
16795]
Length = 217
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/200 (54%), Positives = 147/200 (73%), Gaps = 3/200 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP VV+QT GERSYDI+SRLL +RI+F+ ++ D A+++ AQLLFLEAE+P K+I
Sbjct: 18 MSVVPYVVQQTGNGERSYDIFSRLLCDRIIFLGEEVTDASASVVIAQLLFLEAEDPDKDI 77
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDTMQ +K +ST C+G AAS GS LL+ G KG RFALPN++I
Sbjct: 78 YLYINSPGGSVTAGFAIYDTMQHVKCDVSTICIGLAASFGSFLLAGGAKGKRFALPNSQI 137
Query: 136 LLHQP---SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP G GQA+DI+ A++++K K RLN I +N GK+ EE+ + DRD+ MSA
Sbjct: 138 MIHQPLIGGNGIQGQATDIKIVAENLLKTKERLNRILAENTGKSIEEIYRDTDRDNFMSA 197
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA D+G++D ++ I+
Sbjct: 198 QEALDYGLIDSIITRSDSIK 217
>gi|157825907|ref|YP_001493627.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
gi|166214704|sp|A8GNZ4|CLPP_RICAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157799865|gb|ABV75119.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia akari
str. Hartford]
Length = 201
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 122/194 (62%), Positives = 163/194 (84%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K++
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDV 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL G +GMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGTQGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ G+ + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTGQELKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++D ++ SR
Sbjct: 181 KKFGIIDNIISSRD 194
>gi|269837422|ref|YP_003319650.1| Endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
gi|269786685|gb|ACZ38828.1| Endopeptidase Clp [Sphaerobacter thermophilus DSM 20745]
Length = 209
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 145/190 (76%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMVVE TNRGER+YDIYSRLL++RI+F+ ++D +A I AQ++FLE ENP+++I
Sbjct: 11 ALIPMVVETTNRGERAYDIYSRLLRDRIIFLGTPVDDQIANAIIAQMIFLEYENPEQDIK 70
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG+V AG+AIYDTMQ I+ ++T+C+G ASM ++LL+AG KG RFALPN+RIL
Sbjct: 71 LYINSPGGLVYAGLAIYDTMQMIRCDVATYCIGLGASMAAVLLAAGTKGKRFALPNSRIL 130
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ S GF G DIE A++ + + ++ EI + G+++E V++ +RD+ MSA EA
Sbjct: 131 IHQGSSGFRGSVPDIEIQARETINLTTKMTEIMAYHTGQSFERVKRDTERDYFMSAQEAK 190
Query: 197 DWGVVDKVLM 206
++G+VD VL
Sbjct: 191 EYGIVDHVLE 200
>gi|229151000|ref|ZP_04279211.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228632560|gb|EEK89178.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
Length = 198
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDNVVTKK 198
>gi|15605439|ref|NP_220225.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/UW-3/CX]
gi|76789446|ref|YP_328532.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|166154048|ref|YP_001654166.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 434/Bu]
gi|166154923|ref|YP_001653178.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|237803136|ref|YP_002888330.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/Jali20/OT]
gi|237805057|ref|YP_002889211.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255311535|ref|ZP_05354105.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276]
gi|255317836|ref|ZP_05359082.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276s]
gi|255349098|ref|ZP_05381105.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70]
gi|255503635|ref|ZP_05382025.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70s]
gi|255507314|ref|ZP_05382953.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D(s)2923]
gi|301335249|ref|ZP_07223493.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2tet1]
gi|6831513|sp|O84712|CLPP2_CHLTR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|92087003|sp|Q3KKY8|CLPP2_CHLTA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|3329161|gb|AAC68301.1| CLP Protease [Chlamydia trachomatis D/UW-3/CX]
gi|76167976|gb|AAX50984.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|165930036|emb|CAP03519.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis 434/Bu]
gi|165930911|emb|CAP06473.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|231273357|emb|CAX10272.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231274370|emb|CAX11165.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis B/Jali20/OT]
gi|289525750|emb|CBJ15231.1| ATP-dependent Clp protease proteolytic component [Chlamydia
trachomatis Sweden2]
gi|296435322|gb|ADH17500.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/150]
gi|296436250|gb|ADH18424.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9768]
gi|296437179|gb|ADH19349.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11222]
gi|296438110|gb|ADH20271.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11074]
gi|296439039|gb|ADH21192.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/11023]
gi|297140611|gb|ADH97369.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9301]
Length = 203
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/200 (50%), Positives = 151/200 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+
Sbjct: 61 QIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L+ I + G++ E++ + +RD M A EA
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLSNILAECTGQSVEKIIEDSERDFFMGAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S + ++KS
Sbjct: 181 IAYGLIDKVISSAKETKDKS 200
>gi|148657762|ref|YP_001277967.1| endopeptidase Clp [Roseiflexus sp. RS-1]
gi|148569872|gb|ABQ92017.1| Endopeptidase Clp [Roseiflexus sp. RS-1]
Length = 219
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 94/200 (47%), Positives = 141/200 (70%), Gaps = 1/200 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMVVE TNRGER+YDIYSRLLKER++ + I+D +A LI AQLLFLE E+P ++I
Sbjct: 19 ALIPMVVESTNRGERAYDIYSRLLKERVILLGTPIDDQIANLIVAQLLFLEHEDPDRDIW 78
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG +TAG+AIYDTMQ I+P ++T C+G A SM + +L+ G KG R++LP++ I
Sbjct: 79 LYINSPGGSITAGLAIYDTMQVIRPDVATVCVGMAGSMATPILAGGAKGKRYSLPHSTIH 138
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H GG G A D+E A+++++ ++ + E+ K+ G+ E + + DRD M +A
Sbjct: 139 MHPAGGGARGYAPDVEIMARELLREQQLIRELLAKDTGQPLERIARDFDRDLFMDPQQAK 198
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
++G++D++L R D+ +
Sbjct: 199 EYGIIDEILT-REDLPAAGE 217
>gi|184154836|ref|YP_001843176.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
fermentum IFO 3956]
gi|227514403|ref|ZP_03944452.1| endopeptidase Clp [Lactobacillus fermentum ATCC 14931]
gi|260663135|ref|ZP_05864027.1| Clp protease [Lactobacillus fermentum 28-3-CHN]
gi|226706457|sp|B2GAL4|CLPP_LACF3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|183226180|dbj|BAG26696.1| endopeptidase Clp proteolytic subunit [Lactobacillus fermentum IFO
3956]
gi|227087269|gb|EEI22581.1| endopeptidase Clp [Lactobacillus fermentum ATCC 14931]
gi|260552327|gb|EEX25378.1| Clp protease [Lactobacillus fermentum 28-3-CHN]
Length = 196
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/194 (55%), Positives = 153/194 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED+MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDNMANSIVAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GMAIYDTM FIK + T +G AASM S+L+S+G KG RF LP++ +
Sbjct: 61 YLYINSPGGVVTSGMAIYDTMNFIKSDVQTIVIGMAASMASVLVSSGTKGKRFGLPHSTV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++I+ A++I+K ++ +NEI KN G+++E+VE+ +RDH ++A EA
Sbjct: 121 MIHQPSGGAQGQQTEIQIAAEEILKTRKMINEILAKNSGQSFEQVEQDTERDHYLTAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D V+ S
Sbjct: 181 VDYGLLDGVMDSNN 194
>gi|154497945|ref|ZP_02036323.1| hypothetical protein BACCAP_01925 [Bacteroides capillosus ATCC
29799]
gi|150272935|gb|EDN00092.1| hypothetical protein BACCAP_01925 [Bacteroides capillosus ATCC
29799]
Length = 193
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 144/193 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQTNRGERSYDI+SRLL +RI+F+ ++ A+L+ AQ+L+LEA++P K+I
Sbjct: 1 MSLVPYVVEQTNRGERSYDIFSRLLNDRIIFLGEEVNATTASLVVAQMLYLEAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VT GMAIYDTMQ+IK +ST C+G AASMG+ LLS+G KG R ALPNA I
Sbjct: 61 QFYINSPGGSVTDGMAIYDTMQYIKCDVSTICIGMAASMGAFLLSSGTKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPS G GQ +D+ H + + IK+R+N+I N GK E V +RD+ MSA EA
Sbjct: 121 MIHQPSAGTQGQITDMAIHLKRLEVIKKRMNKILADNTGKPVEVVTADCERDNFMSAEEA 180
Query: 196 CDWGVVDKVLMSR 208
C++G++DKV+ R
Sbjct: 181 CEYGLIDKVIYQR 193
>gi|206971861|ref|ZP_03232810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|206733246|gb|EDZ50419.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
Length = 193
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|104781013|ref|YP_607511.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
entomophila L48]
gi|122403881|sp|Q1ICA8|CLPP_PSEE4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|95110000|emb|CAK14705.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
entomophila L48]
Length = 213
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQLLFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFLVGPVEDYMANLVVAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+AG G R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAAGAAGKRHCLPNSRVM 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQA+DIE HAQ+I+ IK RLNE+ + G++ E +++ +RD+ MSA+ A
Sbjct: 138 IHQPLGGFQGQATDIEIHAQEILNIKARLNELLAHHTGQSLETIKRDTERDNFMSAARAA 197
Query: 197 DWGVVDKVLMSRI 209
++G++D V R
Sbjct: 198 EYGLIDSVYDKRQ 210
>gi|30262760|ref|NP_845137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47528081|ref|YP_019430.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49185606|ref|YP_028858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|49479126|ref|YP_036877.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|165868336|ref|ZP_02212996.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167632654|ref|ZP_02390981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|167637842|ref|ZP_02396121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|170685514|ref|ZP_02876738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|170704851|ref|ZP_02895317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|177649633|ref|ZP_02932635.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190565733|ref|ZP_03018653.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis Tsiankovskii-I]
gi|196032272|ref|ZP_03099686.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196041667|ref|ZP_03108958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218903911|ref|YP_002451745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227814400|ref|YP_002814409.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228927840|ref|ZP_04090888.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228946399|ref|ZP_04108720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|229122335|ref|ZP_04251549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229600104|ref|YP_002867067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|254685352|ref|ZP_05149212.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CNEVA-9066]
gi|254737808|ref|ZP_05195511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Western North America USA6153]
gi|254743018|ref|ZP_05200703.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Kruger B]
gi|254752122|ref|ZP_05204159.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Vollum]
gi|254760643|ref|ZP_05212667.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Australia 94]
gi|300118751|ref|ZP_07056477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|301054310|ref|YP_003792521.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
CI]
gi|67460478|sp|Q6HHU9|CLPP1_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460529|sp|Q81PL4|CLPP1_BACAN RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|30257392|gb|AAP26623.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Ames]
gi|47503229|gb|AAT31905.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. 'Ames Ancestor']
gi|49179533|gb|AAT54909.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. Sterne]
gi|49330682|gb|AAT61328.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|164715062|gb|EDR20579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0488]
gi|167514391|gb|EDR89758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0193]
gi|167532952|gb|EDR95588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0442]
gi|170130652|gb|EDS99513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0389]
gi|170670874|gb|EDT21613.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0465]
gi|172084707|gb|EDT69765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0174]
gi|190563760|gb|EDV17725.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis Tsiankovskii-I]
gi|195995023|gb|EDX58977.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196027436|gb|EDX66052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|218536563|gb|ACK88961.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|227007231|gb|ACP16974.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. CDC 684]
gi|228661184|gb|EEL16810.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228813262|gb|EEM59562.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228831903|gb|EEM77492.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|229264512|gb|ACQ46149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A0248]
gi|298723908|gb|EFI64624.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus SJ1]
gi|300376479|gb|ADK05383.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324326757|gb|ADY22017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
thuringiensis serovar finitimus YBT-020]
Length = 193
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|229012047|ref|ZP_04169226.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|228749135|gb|EEL98981.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
Length = 198
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + ++P V+EQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+
Sbjct: 2 EGFIMSVIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDA 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALP
Sbjct: 62 EKDIFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V +RD+ M+
Sbjct: 122 NSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIISNRTGQPVEKVAHDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA ++G+VD V+ +
Sbjct: 182 AVEAKEYGIVDAVIEKK 198
>gi|256074339|ref|XP_002573483.1| peptidase Clp (S14 family) [Schistosoma mansoni]
gi|238658663|emb|CAZ29715.1| peptidase Clp (S14 family) [Schistosoma mansoni]
Length = 632
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/201 (51%), Positives = 151/201 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
++ L+PMV++++ ER YDIYSRLLK+RI+ + G + D MA + AQLLFL++E+
Sbjct: 38 SQNYIPLIPMVLDKSTNVERYYDIYSRLLKDRIICLMGAVTDEMAGSVIAQLLFLQSEDK 97
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+ I LYINSPGG VTAG+AIYDTMQFI+PP++TFC+GQA+SMGSLLL+AG G RFALP
Sbjct: 98 RTPIHLYINSPGGSVTAGLAIYDTMQFIRPPVATFCIGQASSMGSLLLAAGSHGCRFALP 157
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++ I++HQPSG GQASDI+ A+++++ + +N IY ++ ++ E +EK +DRD+ M+
Sbjct: 158 HSSIMVHQPSGSAHGQASDIKIRAEELIRTRSVINTIYERHTKQSQEVIEKWMDRDYFMT 217
Query: 192 ASEACDWGVVDKVLMSRIDIE 212
A EA +G+VD+VL +
Sbjct: 218 AEEAVSYGIVDRVLHKTPAEK 238
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/191 (52%), Positives = 146/191 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RI+F+ Q+ +A LI AQ+LFL+A++P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ IYDTM I+P +ST C+G AASMG+ LLSAG KG R +LP++RI++
Sbjct: 61 YINSPGGSVSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K+RLN+ + G+ +E+ +RD MSA EA D
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKRLNQSLADHTGQPMSRIEQDTERDFFMSAQEAVD 180
Query: 198 WGVVDKVLMSR 208
+G++D+V +
Sbjct: 181 YGLIDQVYDRK 191
>gi|325474230|gb|EGC77418.1| ATP-dependent Clp protease proteolytic subunit 1 [Treponema
denticola F0402]
Length = 197
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 147/196 (75%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+EQT GERSYDI+SRLLK+RI+FV G+I D A L+ AQLLFLEA+NP K+
Sbjct: 1 MSTLVPYVIEQTGNGERSYDIFSRLLKDRIIFVDGEINDMSADLVVAQLLFLEAQNPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG VTAG+AIYDTMQ I+P + T C+GQ ASMG++LL+ G K R+ALP++R
Sbjct: 61 ISLYINSPGGSVTAGLAIYDTMQHIRPDVQTICLGQCASMGAVLLAGGAKNKRYALPSSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQA DI A++IV++K+ + + +N GKT ++V ++RD MSA E
Sbjct: 121 VMIHQPWGGVQGQAVDINIQAKEIVRLKKLTIKYFAENTGKTEKQVAADMERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRID 210
A +G++D V+ R D
Sbjct: 181 ALAYGIIDTVMNRRKD 196
>gi|170086161|ref|XP_001874304.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651856|gb|EDR16096.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 121/210 (57%), Positives = 155/210 (73%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F +K S LVP+V+EQT RGERSYDI+SRLL+ER++ + G I D +TLI AQ
Sbjct: 29 FSQIQEKWSSPPSANLVPIVIEQTGRGERSYDIFSRLLRERVIMLHGTIRDSDSTLIVAQ 88
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLEAE+ K I LYINSPGG VTAG+AIYDTMQ++ PI T+ +G AASMGSLLL+AG
Sbjct: 89 LLFLEAEDSTKPIHLYINSPGGSVTAGLAIYDTMQYVSSPIHTYSLGLAASMGSLLLAAG 148
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
EKG R LPNA I++HQPSGG SGQASDI HA++I++I++ L IY ++CGK E +
Sbjct: 149 EKGKRHCLPNASIMIHQPSGGASGQASDIAIHAKEILRIRQVLTGIYQRHCGKDGESQAE 208
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
L+RD+ M+A EA ++G+VD +L R E
Sbjct: 209 ALERDYYMTAQEAMEFGIVDGILEKRPSTE 238
>gi|78778230|ref|YP_394545.1| ATP-dependent Clp protease proteolytic subunit [Sulfurimonas
denitrificans DSM 1251]
gi|124015202|sp|Q30NX1|CLPP_SULDN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78498770|gb|ABB45310.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfurimonas
denitrificans DSM 1251]
Length = 196
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 157/195 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVE+T RGERSYDIYSRLLK+RI+ ++G++ D +A+ I AQ+LFLEAE+P+K+I
Sbjct: 1 MSYIPYVVEKTARGERSYDIYSRLLKDRIIMLSGEVNDAVASSIVAQMLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGGVVTAGMAIYDTM +I+P ++T C+GQAASMG+ LLS+G KG R+ALP+ARI
Sbjct: 61 YFYINSPGGVVTAGMAIYDTMNYIRPDVATICVGQAASMGAFLLSSGAKGKRYALPHARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A++I+++K LN I KNC ++ ++VEK DRD+ MSA E+
Sbjct: 121 MIHQPLGGAQGQATDIAIQAKEILRMKEELNAILAKNCSQSIKKVEKDTDRDNFMSAEES 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D+VL+ +
Sbjct: 181 KEYGMIDEVLLKKSK 195
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
gi|67460511|sp|Q7UA36|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
Length = 224
Score = 226 bits (576), Expect = 2e-57, Method: Composition-based stats.
Identities = 100/189 (52%), Positives = 142/189 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVEQ+ RG+R++DIYSRLL+ERI+F+ ++D +A + AQ+LFLEAE+P+K+I +Y
Sbjct: 26 LPTVVEQSGRGDRAFDIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAEDPEKDIQIY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPNARI++H
Sbjct: 86 INSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGCKGKRLALPNARIMIH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA DIE A++I+ +K LN + + G+ +++ + DRD+ +S +EA +
Sbjct: 146 QPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQPLDKIAEDTDRDYFLSPAEAVQY 205
Query: 199 GVVDKVLMS 207
G++D+V+ S
Sbjct: 206 GLIDRVVDS 214
>gi|116333303|ref|YP_794830.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
brevis ATCC 367]
gi|122270009|sp|Q03SM3|CLPP_LACBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116098650|gb|ABJ63799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
brevis ATCC 367]
Length = 198
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 152/198 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ K+I
Sbjct: 1 MNLVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFLDAQDSTKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGGVV++G+AIYDTM FI+ + T +G AASM S+L S+G KG RFALP+A++
Sbjct: 61 SLYINSPGGVVSSGLAIYDTMNFIQSDVQTITLGMAASMASVLASSGTKGKRFALPHAQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++IE A++I+K + +N+I +N G+ E + + +RD+ +SA EA
Sbjct: 121 MIHQPSGGAQGQQTEIEIAAREILKTRELINKILAENSGQPIERLNQDTERDNYLSAQEA 180
Query: 196 CDWGVVDKVLMSRIDIEE 213
D+G++D ++ + + ++
Sbjct: 181 VDYGLIDHIMTNSSEQKK 198
>gi|330443929|ref|YP_004376915.1| Clp protease [Chlamydophila pecorum E58]
gi|328807039|gb|AEB41212.1| Clp protease [Chlamydophila pecorum E58]
Length = 204
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/200 (49%), Positives = 148/200 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG G R+ALP++R+
Sbjct: 61 QIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTPGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A EA
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S + ++K
Sbjct: 181 ISYGLIDKVVTSAKETKDKD 200
>gi|47569052|ref|ZP_00239742.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|52142722|ref|YP_084107.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217960230|ref|YP_002338790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228985882|ref|ZP_04146030.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|67460465|sp|Q63AG0|CLPP1_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|47554321|gb|EAL12682.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|51976191|gb|AAU17741.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus
E33L]
gi|217063351|gb|ACJ77601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|228773811|gb|EEM22229.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 193
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|229046487|ref|ZP_04192142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
gi|228724849|gb|EEL76151.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH676]
Length = 198
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDDVVTKK 198
>gi|146282418|ref|YP_001172571.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri A1501]
gi|145570623|gb|ABP79729.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri A1501]
Length = 206
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ GQ+ED+MA LI AQLLFLEAENP+K+I
Sbjct: 11 GLVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLIVAQLLFLEAENPEKDIH 70
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 71 LYINSPGGSVTAGMSIYDTMQFIKPNVSTICIGQACSMGALLLAGGAAGKRYCLPHSRMM 130
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN++ + G+ + + + DRD+ MS EA
Sbjct: 131 IHQPLGGFQGQASDIEIHAREILTIRERLNKVLAHHTGQPMDVIARDTDRDNFMSGEEAV 190
Query: 197 DWGVVDKVLMSRI 209
+G++D+VL R
Sbjct: 191 KYGLIDQVLTQRQ 203
>gi|291295952|ref|YP_003507350.1| Endopeptidase Clp [Meiothermus ruber DSM 1279]
gi|290470911|gb|ADD28330.1| Endopeptidase Clp [Meiothermus ruber DSM 1279]
Length = 195
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/191 (51%), Positives = 142/191 (74%), Gaps = 1/191 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP V+EQT RGER YDIYSRLLK+RI+F+ I+ +A + AQ+LFL A+NP +EI +
Sbjct: 2 IVPYVIEQTARGERVYDIYSRLLKDRIIFLGTPIDAQVANTVVAQILFLAAQNPNQEIRM 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQF+ P+ST C+G AASMG++LL+AGE G R+ALP++++++
Sbjct: 62 YINSPGGDVDAGLAIYDTMQFVTAPVSTICVGLAASMGAVLLAAGEPGKRYALPHSKVMI 121
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQA+DI A+ I+K ++ LN I ++ + E+VE+ +RD+ ++A EA
Sbjct: 122 HQPWARGLGGQATDIAIQAEQILKTRKVLNTILARHTNQPLEKVERDTERDYYLTAEEAA 181
Query: 197 DWGVVDKVLMS 207
+G+VD+V+
Sbjct: 182 AYGLVDQVVSR 192
>gi|315304656|ref|ZP_07874875.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
ivanovii FSL F6-596]
gi|313626974|gb|EFR95888.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
ivanovii FSL F6-596]
Length = 191
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 106/190 (55%), Positives = 146/190 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDWGVVDKVL 205
D+G++D ++
Sbjct: 181 KDYGLIDDII 190
>gi|325107893|ref|YP_004268961.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968161|gb|ADY58939.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 202
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 151/193 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP VVE+ R ER+ DIYSRLLK+RI+F+ Q+ D ++ I AQLL+L+ ++P+ +
Sbjct: 1 MTTLVPYVVEKNGREERAMDIYSRLLKDRIIFLGTQVNDTISNSIVAQLLYLQFDDPKSD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG +TAGMAIYDTMQFI ++T+C+GQAASMG++LL+AG +G R ALPN+R
Sbjct: 61 IHMYINSPGGSITAGMAIYDTMQFISCDVATYCLGQAASMGAVLLAAGAEGKRAALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP G G A+D+E HA++++K+K+R+NEI K+ G++ EE+E+ DRD+ M+A E
Sbjct: 121 IMIHQPLAGMEGTATDLEIHAREVLKVKKRMNEILQKHTGRSLEELERDTDRDNFMTAEE 180
Query: 195 ACDWGVVDKVLMS 207
A D+G+VDKVL
Sbjct: 181 ARDYGLVDKVLEH 193
>gi|57242492|ref|ZP_00370430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
upsaliensis RM3195]
gi|57016777|gb|EAL53560.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
upsaliensis RM3195]
Length = 194
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 112/190 (58%), Positives = 148/190 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+E+T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+PQK+I L
Sbjct: 2 YIPYVIEKTSRGERSYDIYSRLLKDRIVMLSGEINDDVASSIVAQLLFLEAEDPQKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G K RFALPN+RI++
Sbjct: 62 YINSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAKQKRFALPNSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+++K LNEI +N + + K +RD MSA EA +
Sbjct: 122 HQPLGGARGQATDIEIQAKEILRLKTILNEILAQNTNQKIARITKDTERDFFMSAIEAKE 181
Query: 198 WGVVDKVLMS 207
+G++DKVL
Sbjct: 182 YGLIDKVLEK 191
>gi|294507446|ref|YP_003571504.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
gi|294343774|emb|CBH24552.1| ATP-dependent Clp protease proteolytic subunit [Salinibacter ruber
M8]
Length = 261
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 107/204 (52%), Positives = 150/204 (73%), Gaps = 3/204 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+G + GLVP VVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQ
Sbjct: 37 FQGGLGDQPQS---GLVPKVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQ 93
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL+LE+E + I++YINSPGGV+ +G+ +YDTMQ+++ PIST C+G AASMGS+LL+ G
Sbjct: 94 LLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAASMGSVLLAGG 153
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
E G R LPN+R+++HQP GG GQASDIE A+++ +K+RL +I + GK +++E+
Sbjct: 154 EDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHTGKDIDQIEE 213
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
DR+H +SA EA ++G+VD+V+
Sbjct: 214 DADRNHWLSAEEAQEYGLVDQVMN 237
>gi|261868693|ref|YP_003256615.1| ATP-dependent Clp protease proteolytic subunit [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|293391572|ref|ZP_06635906.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans D7S-1]
gi|261414025|gb|ACX83396.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans D11S-1]
gi|290952106|gb|EFE02225.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans D7S-1]
Length = 188
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 118/188 (62%), Positives = 153/188 (81%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVV+QT+RGER+YDIYSRLLK+R++F++G++ED+MA LI AQLLFLE+E+P K+I+LYIN
Sbjct: 1 MVVDQTSRGERAYDIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGMAIYDTMQFIKP + T C+GQA SMG+ LL+ G G R ALP+AR+++HQP
Sbjct: 61 SPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGAAGKRGALPHARVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDI+ HAQ+I+KIK LNE + G+ E +EK DRD+ MSA EA ++G+
Sbjct: 121 LGGFRGQASDIQIHAQEILKIKSTLNERLAFHTGQPIETIEKDTDRDNFMSAQEAKNYGL 180
Query: 201 VDKVLMSR 208
+D+V R
Sbjct: 181 IDEVFSKR 188
>gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 196
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 138/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN+ + + E++++ DRD MS +EA D
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKNRLNQELSERTSQPLEKIQEDTDRDFFMSPNEAVD 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|229133677|ref|ZP_04262503.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229167385|ref|ZP_04295123.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228615947|gb|EEK73034.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228649712|gb|EEL05721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
Length = 198
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/197 (53%), Positives = 141/197 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E + ++P V+EQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+
Sbjct: 2 EGFIMSVIPYVIEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDA 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALP
Sbjct: 62 EKDIFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V +RD+ M+
Sbjct: 122 NSEIMIHQPLGGVKGQATEIEITAKRILKLKHDINKIISDRTGQPVEKVAHDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA ++G+VD V+ +
Sbjct: 182 AVEAKEYGIVDAVIEKK 198
>gi|87124411|ref|ZP_01080260.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
gi|86167983|gb|EAQ69241.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
Length = 196
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEAE+P K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEAEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K +LN + G+ E+++ DRD MS +A
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKDKLNRELAERSGQPLEKIQVDTDRDFFMSPQDAVS 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDRRP 192
>gi|270261418|ref|ZP_06189691.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
gi|270044902|gb|EFA17993.1| ATP-dependent Clp protease proteolytic subunit 1 [Serratia
odorifera 4Rx13]
Length = 197
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 114/197 (57%), Positives = 150/197 (76%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP VVEQ+++GER++DIYSRLL++RI+F+ G++ D +A L+CAQLLFLEAENP
Sbjct: 1 MREAMLLVPTVVEQSSQGERAFDIYSRLLRDRIIFLNGEVNDAIAELVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I LYINSPGG +T+G AIYDTM+FI + T CMG A SMGS LL AGE G R ALP
Sbjct: 61 EKPIHLYINSPGGAITSGFAIYDTMRFINAQVHTLCMGTARSMGSFLLMAGEPGHRAALP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA + +HQP GGF GQASDI HA+++ + K + +Y ++CG + EEVE+ LDRD M+
Sbjct: 121 NASLHVHQPLGGFQGQASDIFIHAEEMRRTKDLVIRLYAEHCGHSAEEVEQVLDRDRFMT 180
Query: 192 ASEACDWGVVDKVLMSR 208
A EA +WG+VD+VL+ R
Sbjct: 181 ADEAVEWGLVDRVLVRR 197
>gi|228915390|ref|ZP_04078983.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228844333|gb|EEM89391.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 198
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGTKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 196
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 137/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLTHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K++LN+ G+ +E+ DRD MS +EA
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKQKLNQELADRTGQPMTRIEEDTDRDFFMSPAEAMA 180
Query: 198 WGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 YGLIDKVIEKRA 192
>gi|29654072|ref|NP_819764.1| ATP-dependent endopeptidase clp proteolytic subunit [Coxiella
burnetii RSA 493]
gi|161830533|ref|YP_001596950.1| ATP-dependent Clp protease proteolytic subunit [Coxiella burnetii
RSA 331]
gi|60389768|sp|Q83DJ2|CLPP_COXBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082454|sp|A9NDG0|CLPP_COXBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29541338|gb|AAO90278.1| ATP-dependent endopeptidase clp proteolytic subunit [Coxiella
burnetii RSA 493]
gi|161762400|gb|ABX78042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Coxiella
burnetii RSA 331]
Length = 195
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 108/195 (55%), Positives = 148/195 (75%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMVVEQT+RGER+YDIYSRLLK+R++F+ GQ+EDHMA L AQ+LFLE+ENP K+
Sbjct: 1 MSVLVPMVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHMANLAIAQMLFLESENPNKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VT+ MAIYDTMQF+KP + T C+GQAAS G+LLL+ G KG R LP++
Sbjct: 61 INLYINSPGGAVTSAMAIYDTMQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSS 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQ GG+ GQ +DI+ HA+ ++ +LN+I K+ GK E VEK +RD+ ++ E
Sbjct: 121 VMIHQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEE 180
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D + R
Sbjct: 181 AVEYGLIDSIFKERP 195
>gi|165933331|ref|YP_001650120.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. Iowa]
gi|165908418|gb|ABY72714.1| ATP-dependent endopeptidase clp proteolytic subunit [Rickettsia
rickettsii str. Iowa]
Length = 216
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 125/199 (62%), Positives = 164/199 (82%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAEN
Sbjct: 11 QEKILMSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAEN 70
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++L
Sbjct: 71 PKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSL 130
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ M
Sbjct: 131 PHSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFM 190
Query: 191 SASEACDWGVVDKVLMSRI 209
S EA +G+VD ++ SR
Sbjct: 191 SPEEAKKFGLVDNIISSRD 209
>gi|295705906|ref|YP_003598981.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|294803565|gb|ADF40631.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
Length = 193
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/190 (54%), Positives = 143/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ+NRGERSYDIYSRLLK+RI+ + +I DH+A + AQLLFL A++P+K+I
Sbjct: 1 MSTIPYVIEQSNRGERSYDIYSRLLKDRIILIGDEINDHIANSVVAQLLFLAADDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG +AG AIYDTMQ+I+P + T C G AAS G+LLL AG KG R+ALPN+ +
Sbjct: 61 SLYINSPGGSTSAGFAIYDTMQYIEPDVQTICTGMAASFGALLLLAGAKGKRYALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K+ +NEI G+ E+V +RD+ MSA EA
Sbjct: 121 MIHQPLGGARGQATEIEISARRILKLKQHINEIISTRTGQPVEKVANDTERDYFMSAEEA 180
Query: 196 CDWGVVDKVL 205
+G++D +L
Sbjct: 181 KTYGIIDGIL 190
>gi|226489631|emb|CAX74966.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 249
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 161/201 (80%), Gaps = 2/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+V+++T GER+YDIYSRLLK+RI+ + G I D +A L+ AQLL+L++E+ + I
Sbjct: 42 MSLVPIVLDKTTHGERAYDIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPI 101
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQFIKPP++T+C+GQA+SMGSLLL+AG G+RFALP++RI
Sbjct: 102 HIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRI 161
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSG GQASDI+ HA++I+K++ +N IY ++ ++ E +EK +DRD+ M+A EA
Sbjct: 162 MVHQPSGSAHGQASDIKIHAEEIIKMRNIINTIYERHTKQSQEVIEKWMDRDYFMTAEEA 221
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G+VD VL R +KSK
Sbjct: 222 VSFGIVDMVL--REAPADKSK 240
>gi|148241165|ref|YP_001226322.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
gi|147849475|emb|CAK26969.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 207
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 140/195 (71%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
LVP VVEQ+ RGER++DIYSRLL+ERI+F+ I+D +A + AQLL+LEAE+
Sbjct: 11 HSSWQNTLVPTVVEQSGRGERAFDIYSRLLRERIIFLGTGIDDAIADAVVAQLLYLEAED 70
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+KEI +Y+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R AL
Sbjct: 71 PEKEIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLAL 130
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNARI++HQP GG GQA DIE A++I+ +K LN + + G+ +V + DRD+ +
Sbjct: 131 PNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMASHTGQDLAKVSEDTDRDYFL 190
Query: 191 SASEACDWGVVDKVL 205
S EA +G++D+V+
Sbjct: 191 SPDEAVAYGLIDRVV 205
>gi|229060463|ref|ZP_04197826.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228718846|gb|EEL70467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
Length = 198
Score = 226 bits (575), Expect = 2e-57, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V +RD+ M+A EA
Sbjct: 126 MIHQPLGGVKGQATEIEITAKRILKLKHDINKIISDRTGQPVEKVAHDTERDYFMTAVEA 185
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 186 KEYGIVDAVIEKK 198
>gi|229196961|ref|ZP_04323701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
gi|228586518|gb|EEK44596.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
Length = 198
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|221633185|ref|YP_002522410.1| Clp protease [Thermomicrobium roseum DSM 5159]
gi|221155739|gb|ACM04866.1| Clp protease [Thermomicrobium roseum DSM 5159]
Length = 205
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 98/189 (51%), Positives = 142/189 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++PMV+E T+RGER+YDIYSRLL++RI+F+ I+D +A + AQ+LFL ENP+ +I L
Sbjct: 10 VIPMVIETTSRGERAYDIYSRLLRDRIIFLGTPIDDQVANAVIAQMLFLAHENPEADIKL 69
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG+V AG+AIYDTMQ I+P ++T+C+G ASM ++LL+AG KG RFALP++R+L+
Sbjct: 70 YINSPGGLVYAGLAIYDTMQMIEPDVATYCVGLGASMAAVLLAAGTKGKRFALPHSRVLI 129
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQ + GF G DIE A++ + + L E+ + G+ +E V++ +RD+ MSA EA D
Sbjct: 130 HQGTSGFRGSVPDIEIQARETLNLTTMLTELLAFHTGQPFERVKRDTERDYFMSAYEAKD 189
Query: 198 WGVVDKVLM 206
+G+VD VL
Sbjct: 190 YGIVDHVLE 198
>gi|109947464|ref|YP_664692.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
acinonychis str. Sheeba]
gi|123066220|sp|Q17XD3|CLPP_HELAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109714685|emb|CAJ99693.1| ATP-dependent clp protease proteolytic subunit [Helicobacter
acinonychis str. Sheeba]
Length = 195
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T+RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTDRGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I +N ++ E + K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEIIRLKGLMNSILAQNSKQSLERIAKDTDRDFYMSALEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DKVL +
Sbjct: 181 KEYGLIDKVLEKNVK 195
>gi|228953123|ref|ZP_04115182.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229190887|ref|ZP_04317878.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228592555|gb|EEK50383.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228806538|gb|EEM53098.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 198
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|329770311|ref|ZP_08261696.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
gi|328836764|gb|EGF86416.1| ATP-dependent Clp protease proteolytic subunit [Gemella sanguinis
M325]
Length = 215
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 145/190 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT++GER+YDIYSRLLK+RI+ + ++ D +A I +QLLFLEA++ +K+I
Sbjct: 1 MNLIPTVIEQTSQGERAYDIYSRLLKDRIIILGSEVNDQVANSITSQLLFLEAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG AIYDTMQ IK + T CMG AASMG+ LL+AG G R+ALPNA +
Sbjct: 61 YFYINSPGGSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + +LN+I G+T + +E+ +RD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLSAEEA 180
Query: 196 CDWGVVDKVL 205
C++G+VDKV+
Sbjct: 181 CEYGLVDKVM 190
>gi|58616924|ref|YP_196123.1| ATP-dependent Clp protease proteolytic subunit [Ehrlichia
ruminantium str. Gardel]
gi|67460150|sp|Q5FFG7|CLPP_EHRRG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58416536|emb|CAI27649.1| ATP-dependent CLP protease proteolytic subunit [Ehrlichia
ruminantium str. Gardel]
Length = 198
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 135/197 (68%), Positives = 172/197 (87%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVE T+RGER+YDIY+RLLKERI+F+TG IED MA+L+ AQL+FLEAENP+K+I
Sbjct: 1 MTLVPMVVEPTSRGERAYDIYTRLLKERIIFITGPIEDQMASLVVAQLIFLEAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGGVVTAG++IYDTMQ++KP I+T C+GQAASMGSLLL+AGEKGMR ALPN+RI
Sbjct: 61 SMYINSPGGVVTAGLSIYDTMQYVKPRIATLCLGQAASMGSLLLAAGEKGMRCALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGGF GQA+DIE HA++I+ IK RLN IYVK+ G+ EV +++RD+ MSA A
Sbjct: 121 MIHQPSGGFQGQATDIEIHAKEILNIKSRLNYIYVKHTGRELSEVVASMERDNFMSADSA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++DKV+ R+DIE
Sbjct: 181 QDFGIIDKVIEKRLDIE 197
>gi|121612255|ref|YP_999911.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81-176]
gi|167004871|ref|ZP_02270629.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
jejuni subsp. jejuni 81-176]
gi|166201812|sp|A1VXS0|CLPP_CAMJJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|87250345|gb|EAQ73303.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Campylobacter
jejuni subsp. jejuni 81-176]
Length = 194
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 108/189 (57%), Positives = 147/189 (77%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLFLEAE+P K+I LY
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLFLEAEDPTKDIYLY 62
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G +IYDTM +IKP + T C+GQAASMG+ LLS G +G RFALPN+RI++H
Sbjct: 63 INSPGGVITSGFSIYDTMNYIKPDVCTICIGQAASMGAFLLSCGAEGKRFALPNSRIMIH 122
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+++K LN+I KN + ++ K +RD MS EA ++
Sbjct: 123 QPLGGARGQATDIEIQAKEILRLKTILNDILAKNTKQKVAKIAKDTERDFFMSTQEAKEY 182
Query: 199 GVVDKVLMS 207
G++DKVL
Sbjct: 183 GLIDKVLEK 191
>gi|291543930|emb|CBL17039.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
sp. 18P13]
Length = 196
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 107/196 (54%), Positives = 151/196 (77%), Gaps = 3/196 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGERSYDI+SRLL +RI+ ++ + D A+L+ AQLL+LE+++P K+I
Sbjct: 1 MSLVPYVVEQTSRGERSYDIFSRLLNDRIIMLSEDVNDTTASLVVAQLLYLESQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG V+AG AIYDTMQ+IK +ST C+G AASMG+ LLS+G KG RFALPN+ I
Sbjct: 61 SLYINSPGGSVSAGFAIYDTMQYIKCDVSTICIGLAASMGAFLLSSGAKGKRFALPNSEI 120
Query: 136 LLHQPSG---GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP G SGQA+DI+ +++++ K LN I +N GK+ E++ + DRD+ M+A
Sbjct: 121 MIHQPLIGGGGLSGQATDIQIRTENLLRTKENLNRILSENTGKSIEDIRRDTDRDNFMTA 180
Query: 193 SEACDWGVVDKVLMSR 208
+EA ++G++DKV+ R
Sbjct: 181 NEAMEYGLIDKVIAKR 196
>gi|124013817|sp|Q2S2L8|CLPP1_SALRD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 233
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 107/204 (52%), Positives = 150/204 (73%), Gaps = 3/204 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+G + GLVP VVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQ
Sbjct: 9 FQGGLGDQPQS---GLVPKVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQ 65
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL+LE+E + I++YINSPGGV+ +G+ +YDTMQ+++ PIST C+G AASMGS+LL+ G
Sbjct: 66 LLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAASMGSVLLAGG 125
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
E G R LPN+R+++HQP GG GQASDIE A+++ +K+RL +I + GK +++E+
Sbjct: 126 EDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHTGKDIDQIEE 185
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
DR+H +SA EA ++G+VD+V+
Sbjct: 186 DADRNHWLSAEEAQEYGLVDQVMN 209
>gi|297622838|ref|YP_003704272.1| endopeptidase Clp [Truepera radiovictrix DSM 17093]
gi|297164018|gb|ADI13729.1| Endopeptidase Clp [Truepera radiovictrix DSM 17093]
Length = 209
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 89/195 (45%), Positives = 140/195 (71%), Gaps = 1/195 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT RGER YD+YSRLLKERI+F+ I+ +A ++ AQLL L++++ ++EI
Sbjct: 1 MPLVPYVIEQTGRGERMYDVYSRLLKERIIFLGTPIDSEVANVVVAQLLLLDSQSSEQEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+L+IN PGG V AG+AIYDTMQFI P++T C+G A SMGS++L AG +G R ALPN+R+
Sbjct: 61 NLFINCPGGEVYAGLAIYDTMQFISAPVATTCVGIAMSMGSIILMAGAEGKRAALPNSRV 120
Query: 136 LLHQPSGGFSGQA-SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++HQ S GF + D+E A++ + ++ + +Y ++ G+ E++ + ++RD MS +
Sbjct: 121 MIHQGSAGFPRSSLPDLEVQAREFMFVRDTILGLYERHTGQEREKILRDMERDFFMSPEQ 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D+V+ R
Sbjct: 181 AKAYGLIDRVIEPRS 195
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 105/197 (53%), Positives = 150/197 (76%), Gaps = 1/197 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VP+V+EQ+ GER++DIYSRLL+ERIVF+ I+D++A I AQLL+L+AE+P+K+I
Sbjct: 25 NIVPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQ 84
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS G KG R ALP+ARI+
Sbjct: 85 LYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSARIM 144
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +I+ A++I+ IK+RLN + ++ G+ YE + + +RD MS +A
Sbjct: 145 IHQPIGGAQGQAVEIDIQAKEILYIKQRLNSLLAEHTGQPYERIAEDTERDFYMSVHDAK 204
Query: 197 DWGVVDKVLMSRIDIEE 213
D+G++D+V+ SR ++ +
Sbjct: 205 DYGLIDQVI-SRSELPD 220
>gi|30020914|ref|NP_832545.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218233818|ref|YP_002367506.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296503329|ref|YP_003665029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|67460526|sp|Q81CH1|CLPP1_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|29896467|gb|AAP09746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|218161775|gb|ACK61767.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|296324381|gb|ADH07309.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
Length = 193
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 YLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|299755201|ref|XP_001828495.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea
okayama7#130]
gi|298411115|gb|EAU93328.2| ATP-dependent Clp protease proteolytic subunit [Coprinopsis cinerea
okayama7#130]
Length = 254
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 118/210 (56%), Positives = 153/210 (72%), Gaps = 7/210 (3%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE LVPMV+EQT RGERSYDI+SRLL+ER++ + G I D +TL+ AQLLFLEAE+
Sbjct: 39 SEPTQSNLVPMVIEQTGRGERSYDIFSRLLRERVIMLHGPIRDTDSTLVVAQLLFLEAED 98
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K I LYINSPGG VTAG+AIYDTMQ++ PI T+ +G AASMGSLLL+AG KG R L
Sbjct: 99 STKPIHLYINSPGGSVTAGLAIYDTMQYVSAPIHTYGLGLAASMGSLLLAAGAKGRRHCL 158
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT-------YEEVEKT 183
PNA I++HQPSGG SGQA+DI HA++I++I++ L IY ++C K + E
Sbjct: 159 PNASIMIHQPSGGASGQATDIAIHAKEILRIRQLLTGIYQRHCAKEGETEAAGLKRFETA 218
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
L+RD+ M+A EA ++G+VD +L R +EE
Sbjct: 219 LERDYYMTAQEALEFGIVDGILEKRPPLEE 248
>gi|124023248|ref|YP_001017555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963534|gb|ABM78290.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9303]
Length = 197
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP + T C+G AASMG+ LL AG G R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + G+ E +++ DRD MS +EA
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPTEAVG 180
Query: 198 WGVVDKVLMSRI 209
+G+VD V+ R
Sbjct: 181 YGLVDSVIDKRP 192
>gi|94987236|ref|YP_595169.1| protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
gi|116243147|sp|Q1MQ79|CLPP_LAWIP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94731485|emb|CAJ54848.1| Protease subunit of ATP-dependent Clp proteases [Lawsonia
intracellularis PHE/MN1-00]
Length = 209
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 167/201 (83%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+D+F VP+VVE R ER+YDIYSRLLK+RIV + ++ D +A+LICAQLLFLE+++P
Sbjct: 2 DDIFNMTVPIVVENNGRNERAYDIYSRLLKDRIVLLGTEVNDQVASLICAQLLFLESQDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+KEI LYINSPGG VTAG+AIYDTM +I P ++T CMG+AASMG+LLL+AGEK MR+ALP
Sbjct: 62 EKEIYLYINSPGGSVTAGLAIYDTMNYITPNVATVCMGRAASMGALLLAAGEKNMRYALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+++++HQP GG+ GQA+DI+ HA++I+++++RLNEI ++ G++ E+V + +RD+ M+
Sbjct: 122 NSQVMIHQPLGGYQGQATDIDIHAREILRMRQRLNEILMEQTGQSLEKVAQDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSRIDIE 212
A +A +G++DKVL+SR D++
Sbjct: 182 AEDAKAYGLIDKVLVSRKDLD 202
>gi|33862948|ref|NP_894508.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460517|sp|Q7V7R2|CLPP3_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634865|emb|CAE20851.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 197
Score = 225 bits (574), Expect = 3e-57, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP + T C+G AASMG+ LL AG G R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + G+ E +++ DRD MS +EA
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPAEAVG 180
Query: 198 WGVVDKVLMSRI 209
+G+VD V+ R
Sbjct: 181 YGLVDSVIDKRP 192
>gi|218897812|ref|YP_002446223.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|218542547|gb|ACK94941.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
Length = 193
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKIGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 YLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
++G+VD V+ +
Sbjct: 181 KEYGIVDDVVTKK 193
>gi|291288695|ref|YP_003505511.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
gi|290885855|gb|ADD69555.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Denitrovibrio
acetiphilus DSM 12809]
Length = 195
Score = 225 bits (573), Expect = 3e-57, Method: Composition-based stats.
Identities = 110/195 (56%), Positives = 152/195 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP V+EQT RGERSYDIYSRLLK+RI+F+ Q+E +A I AQ+LFLE+++P K+
Sbjct: 1 MSYYVPYVIEQTGRGERSYDIYSRLLKDRIIFLGSQVESGIANSIVAQMLFLESDDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG V+ G+AI+DTM++IKP +ST C+GQAASM ++LL+AG KG R+A+PNAR
Sbjct: 61 IHLYINSPGGSVSDGLAIFDTMKYIKPDVSTICIGQAASMAAVLLAAGTKGKRYAVPNAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQ GG GQA+DIE A++I++IK+ LN+I GK+YE++EK DRD+ MSA E
Sbjct: 121 VMIHQVMGGAQGQAADIEIQAKEILRIKKILNDILTDATGKSYEKIEKDSDRDYFMSAPE 180
Query: 195 ACDWGVVDKVLMSRI 209
A +G++D V+ +R
Sbjct: 181 AKAYGIIDDVITNRA 195
>gi|83814886|ref|YP_445563.1| Clp protease [Salinibacter ruber DSM 13855]
gi|83756280|gb|ABC44393.1| Clp protease [Salinibacter ruber DSM 13855]
Length = 246
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 107/204 (52%), Positives = 150/204 (73%), Gaps = 3/204 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+G + GLVP VVEQT RGER+YDI+SRLLKERIVF+ I D +A L AQ
Sbjct: 22 FQGGLGDQPQS---GLVPKVVEQTTRGERAYDIFSRLLKERIVFIGTPINDQIANLTVAQ 78
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL+LE+E + I++YINSPGGV+ +G+ +YDTMQ+++ PIST C+G AASMGS+LL+ G
Sbjct: 79 LLYLESEGSSQPINIYINSPGGVIYSGLGVYDTMQYVEAPISTTCVGLAASMGSVLLAGG 138
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
E G R LPN+R+++HQP GG GQASDIE A+++ +K+RL +I + GK +++E+
Sbjct: 139 EDGQRACLPNSRVMMHQPMGGTEGQASDIEIQAKEMAWLKKRLYQILSFHTGKDIDQIEE 198
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
DR+H +SA EA ++G+VD+V+
Sbjct: 199 DADRNHWLSAEEAQEYGLVDQVMN 222
>gi|329767857|ref|ZP_08259372.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
gi|328838776|gb|EGF88373.1| ATP-dependent Clp protease proteolytic subunit [Gemella haemolysans
M341]
Length = 215
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 144/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT++GER+YDIYSRLLK+RI+ + + D +A I +QLLFLEA++ +K+I
Sbjct: 1 MNLIPTVIEQTSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG AIYDTMQ IK + T CMG AASMG+ LL+AG G R+ALPNA +
Sbjct: 61 YFYINSPGGSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + +LN+I G+T + +E+ +RD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLTAEEA 180
Query: 196 CDWGVVDKVL 205
C++G+VDKV+
Sbjct: 181 CEYGLVDKVM 190
>gi|241888864|ref|ZP_04776170.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
gi|241864540|gb|EER68916.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gemella
haemolysans ATCC 10379]
Length = 215
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 144/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT++GER+YDIYSRLLK+RI+ + + D +A I +QLLFLEA++ +K+I
Sbjct: 1 MNLIPTVIEQTSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG AIYDTMQ IK + T CMG AASMG+ LL+AG G R+ALPNA +
Sbjct: 61 YFYINSPGGSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + +LN+I G+T + +E+ +RD+ ++A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILRTREKLNKILADRTGQTIKTIERDTERDNYLTAEEA 180
Query: 196 CDWGVVDKVL 205
C++G+VDKV+
Sbjct: 181 CEYGLVDKVM 190
>gi|228921458|ref|ZP_04084781.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228838231|gb|EEM83549.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 198
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|139437042|ref|ZP_01771202.1| Hypothetical protein COLAER_00176 [Collinsella aerofaciens ATCC
25986]
gi|133776689|gb|EBA40509.1| Hypothetical protein COLAER_00176 [Collinsella aerofaciens ATCC
25986]
Length = 210
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 103/204 (50%), Positives = 146/204 (71%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ LVP V+EQT RGERSYDIYSRLL +RI+F+ +I A L+ AQLL
Sbjct: 1 MEMRMIAKFDSALVPYVIEQTPRGERSYDIYSRLLNDRIIFLGEEINSVSANLVVAQLLH 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+++ +K+ISLYINSPGG V +G+AI DTM FIKP +ST C+G AASM ++LLSAG KG
Sbjct: 61 LESQDAEKDISLYINSPGGEVYSGLAILDTMNFIKPQVSTICVGMAASMAAVLLSAGAKG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF LP++++++HQPSGG GQ ++IE A++I K +R LN+I G+ E+V+ +
Sbjct: 121 KRFCLPHSKVMIHQPSGGAQGQQTEIEIVAEEIKKTRRELNQILSDASGQPIEKVQADTE 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD+ ++A EA D+G++D+++ SR
Sbjct: 181 RDNYLTAVEALDYGLIDRIVTSRD 204
>gi|323340198|ref|ZP_08080462.1| ATP-dependent Clp protease, protease subunit [Lactobacillus ruminis
ATCC 25644]
gi|323092389|gb|EFZ34997.1| ATP-dependent Clp protease, protease subunit [Lactobacillus ruminis
ATCC 25644]
Length = 197
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 95/197 (48%), Positives = 147/197 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ+ +GER+YDIYSRLLK+RI+ V+G++ D MA + AQLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSAQGERAYDIYSRLLKDRIIMVSGEVTDDMANAVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYDTM F+ + T MG AASM S+L +AG KG RFALPN+ I
Sbjct: 61 YMYINSPGGSVSAGLAIYDTMNFVNADVQTIVMGMAASMASVLSTAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQ+++I+ A+ I+K ++ +N+I + G+ E + K +RD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQSTEIQIAAEHILKTRKLINQILADHSGQDIETINKDTERDNFMTAQQA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ ++ ++
Sbjct: 181 VDYGLIDGIMKNKKKLK 197
>gi|15806970|ref|NP_295695.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus
radiodurans R1]
gi|18203425|sp|Q9RSZ7|CLPP_DEIRA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|6459760|gb|AAF11524.1|AE002035_7 ATP-dependent Clp protease, proteolytic subunit ClpP [Deinococcus
radiodurans R1]
Length = 204
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 100/195 (51%), Positives = 144/195 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT RGERSYDIYSRLLK+RI+FV +E MA I AQLL L+++NP++EI
Sbjct: 4 MSVIPYVIEQTGRGERSYDIYSRLLKDRIIFVGTPVESQMANSIVAQLLLLDSQNPEQEI 63
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YIN PGG V AG+AIYDTM++IK P+ST C+G A SMGS+LL AG+KG R ALPN+RI
Sbjct: 64 QMYINCPGGEVYAGLAIYDTMRYIKAPVSTICVGMAMSMGSVLLMAGDKGKRMALPNSRI 123
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ S GF G D+E A++++K++ L +IY K+ E++ + ++RD+ MS EA
Sbjct: 124 MIHQGSAGFRGNTPDLEVQAKEVLKLRDTLVDIYHKHTDLPQEKLLRDMERDYFMSPEEA 183
Query: 196 CDWGVVDKVLMSRID 210
+G++D+V+ +
Sbjct: 184 LKYGLIDQVIDQTRE 198
>gi|229030470|ref|ZP_04186509.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
gi|228730841|gb|EEL81782.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
Length = 198
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G++ E + +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQSIERIAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|148242503|ref|YP_001227660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850813|emb|CAK28307.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 196
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 139/192 (72%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQLLFLEAE+P K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFMGEPVTAESANRIVAQLLFLEAEDPDKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP + T C+G AASMG+ LL+AG G R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLAAGAPGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K+RLNE + G+ + ++K DRD MS +EA +
Sbjct: 121 HQPLGGAQGQASDIRIQADEILFLKKRLNEELAQRTGQPLDRIQKDTDRDFFMSPAEAAE 180
Query: 198 WGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 YGLIDKVIDQRP 192
>gi|302673690|ref|XP_003026531.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8]
gi|300100214|gb|EFI91628.1| hypothetical protein SCHCODRAFT_86223 [Schizophyllum commune H4-8]
Length = 245
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 118/200 (59%), Positives = 148/200 (74%), Gaps = 7/200 (3%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQT RGERSYDI+SRLL+ER+V + G I D + LI +QLLFLEAE K I
Sbjct: 42 NLVPMVIEQTGRGERSYDIFSRLLRERVVMLYGPIRDTDSALIVSQLLFLEAEETSKPIH 101
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAG+AIYDTMQ++ PI T+C+G AASMGSLLL+AGEKG R LPNA I+
Sbjct: 102 LYINSPGGSVTAGLAIYDTMQYVSSPIHTYCIGCAASMGSLLLAAGEKGKRHCLPNASIM 161
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE-------EVEKTLDRDHI 189
+HQPSGG SGQASD+ HA++I++++ L IY K+C K E E+ L+RD+
Sbjct: 162 IHQPSGGASGQASDVAIHAKEILRVREALTGIYQKHCAKPDESEAEGLARFERALERDYF 221
Query: 190 MSASEACDWGVVDKVLMSRI 209
M+A EA D+G+VD +L R
Sbjct: 222 MTAKEAIDFGIVDGILEKRP 241
>gi|260435297|ref|ZP_05789267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|260413171|gb|EEX06467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 205
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 98/202 (48%), Positives = 140/202 (69%), Gaps = 2/202 (0%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D D + +P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLE
Sbjct: 1 MRDPADAQM--IPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLE 58
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE+P+K+I LYINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R
Sbjct: 59 AEDPEKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKR 118
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+L ++RI++HQP GG GQASDI A +I+ +K RLN+ G+ + +++ DRD
Sbjct: 119 SSLQHSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQPLDRIQQDTDRD 178
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
MS +EA ++G++D V+ R
Sbjct: 179 FFMSPTEAVNYGLIDSVIDKRP 200
>gi|221194696|ref|ZP_03567753.1| Clp protease [Atopobium rimae ATCC 49626]
gi|221185600|gb|EEE17990.1| Clp protease [Atopobium rimae ATCC 49626]
Length = 206
Score = 225 bits (573), Expect = 4e-57, Method: Composition-based stats.
Identities = 103/199 (51%), Positives = 141/199 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P V+EQT RGERSYDIYSRLL +RIVF+ + A L+ AQLL LE+++P+K+IS
Sbjct: 8 PLIPYVIEQTPRGERSYDIYSRLLNDRIVFLGEPVTRDSANLVIAQLLHLESQDPEKDIS 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGG V AG+ I DTM FIKP +ST C+G AASM ++LL+AG KG R ALPN+ +L
Sbjct: 68 LYIDSPGGDVYAGLGILDTMNFIKPDVSTICVGMAASMAAVLLAAGAKGKRLALPNSMVL 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPS G GQ +DI+ A + +++ LNE+ + G+ E+V +RD+ M A EA
Sbjct: 128 IHQPSSGVQGQQTDIQIVADETKWLRQHLNELLSEYTGQPLEKVNVDTERDNYMRAQEAA 187
Query: 197 DWGVVDKVLMSRIDIEEKS 215
D+G+VD+V+ SR D +
Sbjct: 188 DYGLVDRVISSRNDQSKAE 206
>gi|171915864|ref|ZP_02931334.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Verrucomicrobium spinosum DSM 4136]
Length = 237
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E R ER+YDIYSRLLK+RI+F+ I+D +A ++ AQLLFL+ ++P+K+I++
Sbjct: 18 IIPTVIEAEGRMERAYDIYSRLLKDRIIFIGTPIDDQVANIVIAQLLFLQMQDPKKDINI 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTMQF+ ++T+C+G AASMG++LL+AG KG R+ALPN+ I++
Sbjct: 78 YINSPGGSVTAGLAIYDTMQFVTCDVNTYCIGIAASMGAVLLTAGTKGKRYALPNSHIMI 137
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQ SGG G ASD+ER + + ++KRRLN+I + GKT E VE+ DRD+ MS EA
Sbjct: 138 HQVSGGAQGTASDVERTVEFMYRLKRRLNKIISHHTGKTVEAVERDADRDYYMSGEEAAA 197
Query: 198 WGVVDKVLMSRID 210
+G+VDKVL ++ +
Sbjct: 198 YGIVDKVLDNKKE 210
>gi|229156366|ref|ZP_04284461.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228627089|gb|EEK83821.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
Length = 198
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVTKK 198
>gi|320106219|ref|YP_004181809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Terriglobus
saanensis SP1PR4]
gi|319924740|gb|ADV81815.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Terriglobus
saanensis SP1PR4]
Length = 198
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 158/195 (81%), Gaps = 3/195 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+GLVPMV+EQT+RGER+YDIYSRLL++ I+F+ I+D++A +I AQLLFL E+P+K+I
Sbjct: 1 MGLVPMVIEQTSRGERAYDIYSRLLRDNIIFLGTPIDDNIANVIIAQLLFLSGEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IK +ST C+GQAASMG+ LL AG+KG RFALPN+RI
Sbjct: 61 QLYINSPGGSITAGMAIYDTMQYIKNDVSTLCIGQAASMGAFLLMAGKKGKRFALPNSRI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
L+HQP SGQA++I+ HA++I++I+ +N+I ++ G+T E++E+ DRD IM++
Sbjct: 121 LIHQPLIMGGGISGQATEIDIHAREILRIRELMNKIQAEHTGQTLEQIERDTDRDFIMNS 180
Query: 193 SEACDWGVVDKVLMS 207
++A ++G++D ++
Sbjct: 181 AQAKEYGLIDDIITR 195
>gi|296116539|ref|ZP_06835149.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976751|gb|EFG83519.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 211
Score = 224 bits (572), Expect = 4e-57, Method: Composition-based stats.
Identities = 125/203 (61%), Positives = 167/203 (82%), Gaps = 1/203 (0%)
Query: 6 CAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
++ ++F LVPMVVEQT+RGER++DIYSRLL+ERI+F+TG + D ++ ++ AQLL
Sbjct: 1 MRDRNPVEIFNNALVPMVVEQTSRGERAFDIYSRLLQERIIFLTGPVYDQVSAVVSAQLL 60
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
+LE+ NP KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+ GEK
Sbjct: 61 YLESVNPTKEISFYINSPGGVVSAGLAIYDTMQYIRSPVSTVCIGQAASMGSLLLAGGEK 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RFALPN+R+++HQPSGG GQASDIE A +I+ I++RLNEIY + G+T EE+E+ L
Sbjct: 121 GRRFALPNSRVMVHQPSGGAQGQASDIEIQATEILTIRKRLNEIYENHTGRTLEEIERKL 180
Query: 185 DRDHIMSASEACDWGVVDKVLMS 207
+RD MSA EAC +G+VD+V+ +
Sbjct: 181 ERDSYMSAEEACAFGIVDEVVRN 203
>gi|315648325|ref|ZP_07901425.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315276260|gb|EFU39604.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 193
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 142/192 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP VVEQTNRGERSYDIYSRLLK+RIVFV I+D +A I AQLLFL AE+P+K+I
Sbjct: 1 MNIVPYVVEQTNRGERSYDIYSRLLKDRIVFVGAAIDDAIANSIIAQLLFLAAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG IYDTMQ IKP +ST C G AAS G++LL AG G R ALPN+ I
Sbjct: 61 HMYINSPGGSVSAGFGIYDTMQIIKPQVSTICTGFAASYGAILLLAGATGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI A+ I+K + +L I + G++ E VE ++RD+ MSA EA
Sbjct: 121 MIHQPHGGVQGQATDIAITAKRIIKTREKLAHIISERTGQSVERVEMDMERDYFMSAQEA 180
Query: 196 CDWGVVDKVLMS 207
D+G++D ++ +
Sbjct: 181 KDYGIIDDIVTN 192
>gi|284046814|ref|YP_003397154.1| ATP-dependent Clp protease proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
gi|283951035|gb|ADB53779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Conexibacter
woesei DSM 14684]
Length = 193
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 105/192 (54%), Positives = 144/192 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+E+T RGER +DIYSRLL ERI+F+ ++D +A LI AQLL LE+ +P K+I
Sbjct: 1 MPLVPMVIERTARGEREFDIYSRLLNERIIFLGTAVDDQVANLIVAQLLHLESSDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG + AG+AIYDTMQFIKP + T C G A SMGSLLL G +G R +LPN+RI
Sbjct: 61 SIYINSPGGSIYAGLAIYDTMQFIKPDVQTICCGIAMSMGSLLLMGGARGKRMSLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS GF GQ++DIE HA++I+K ++R++EIY + G+ E V ++RD EA
Sbjct: 121 LIHQPSAGFEGQSTDIEIHAREIIKTRKRIDEIYAFHTGQPEERVNHDMERDRFFKPDEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 181 VEYGLIDRVITK 192
>gi|168031792|ref|XP_001768404.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680329|gb|EDQ66766.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 117/190 (61%), Positives = 156/190 (82%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLL+LE+E+P K I LYIN
Sbjct: 1 MVIEHTSRGERAYDIFSRLLKERIVCIHGPISDDTASLVVAQLLYLESEHPDKPIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL+AG+ G R +LPNAR+++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIRSPVSTLCVGQAASMGSLLLAAGQPGERRSLPNARVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG SGQASDI A++I+ ++ RL+ +YVK+ G TYE++E +++RDH MS EA +G+
Sbjct: 121 SGGASGQASDIAIQAREILDMRARLSRLYVKHTGHTYEKIESSMERDHFMSPEEAKQFGL 180
Query: 201 VDKVLMSRID 210
VD+V+ R +
Sbjct: 181 VDEVIERRPE 190
>gi|42527179|ref|NP_972277.1| ATP-dependent Clp protease proteolytic subunit [Treponema denticola
ATCC 35405]
gi|67460504|sp|Q73M38|CLPP1_TREDE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|41817603|gb|AAS12188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
denticola ATCC 35405]
Length = 197
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 147/196 (75%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+EQT GERSYDI+SRLLK+RI+FV G+I D A L+ AQLLFLEA+NP K+
Sbjct: 1 MSTLVPYVIEQTGNGERSYDIFSRLLKDRIIFVDGEINDMSADLVVAQLLFLEAQNPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG VTAG+AIYDTMQ I+P + T C+GQ ASMG++LL+ G K R+ALP++R
Sbjct: 61 ISLYINSPGGSVTAGLAIYDTMQHIRPDVQTICLGQCASMGAVLLAGGAKNKRYALPSSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQA DI A++IV++K+ + + +N GKT ++V ++RD MSA E
Sbjct: 121 VMIHQPWGGVQGQAVDINIQAKEIVRLKKLTIKYFAENTGKTEKQVAADMERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRID 210
A +G++D V+ R D
Sbjct: 181 ALTYGIIDTVMNRRKD 196
>gi|15892669|ref|NP_360383.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
gi|15619841|gb|AAL03284.1| ATP-dependent clp protease proteolytic subunit [Rickettsia conorii
str. Malish 7]
Length = 216
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 125/199 (62%), Positives = 164/199 (82%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAEN
Sbjct: 11 QEKILMSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAEN 70
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+K+I +YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++L
Sbjct: 71 PKKDIYMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSL 130
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ M
Sbjct: 131 PHSRIMIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFM 190
Query: 191 SASEACDWGVVDKVLMSRI 209
S EA +G+VD ++ SR
Sbjct: 191 SPEEAKKFGLVDNIMSSRD 209
>gi|317495864|ref|ZP_07954227.1| Clp protease [Gemella moribillum M424]
gi|316914041|gb|EFV35524.1| Clp protease [Gemella moribillum M424]
Length = 212
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 143/190 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT++GER+YDIYSRLLK+RI+ + + D +A I +QLLFLEA++ +K+I
Sbjct: 1 MNLIPTVIEQTSQGERAYDIYSRLLKDRIIILGSDVNDQVANSITSQLLFLEAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG AIYDTMQ IK + T CMG AASMG+ LL+AG G R+ALPNA +
Sbjct: 61 YFYINSPGGSVTAGFAIYDTMQHIKCDVVTICMGMAASMGAFLLAAGTIGKRYALPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I++ + +LN+I G+T + +E+ +RD+ +SA EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKHILRTREKLNKILADRTGQTIKAIERDTERDNYLSAEEA 180
Query: 196 CDWGVVDKVL 205
C +G+VDKV+
Sbjct: 181 CAYGLVDKVM 190
>gi|115311786|sp|Q2GD19|CLPP_NEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 201
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 119/201 (59%), Positives = 163/201 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVV+QT RGER+YDI+SRLLKER+VF+TG IED MA+LI AQLLFLEAENP K+I
Sbjct: 1 MNLVPMVVDQTPRGERAYDIFSRLLKERVVFLTGPIEDGMASLIVAQLLFLEAENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAAS SL+L++G +G RFALP++R+
Sbjct: 61 FMYINSPGGVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEGKRFALPHSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQA+D+E H ++I+++KR +NEIY K+ G+T +++E L+RD +S EA
Sbjct: 121 MVHQPSGGVRGQATDMEIHVKEILQLKRMINEIYQKHTGETIKKIETLLERDTFLSPEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
G++D ++ R + K +
Sbjct: 181 KKVGIIDDIITQRKENSGKQE 201
>gi|157828616|ref|YP_001494858.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
gi|166214706|sp|A8GSH5|CLPP_RICRS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157801097|gb|ABV76350.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
rickettsii str. 'Sheila Smith']
Length = 201
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELQHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD ++ SR
Sbjct: 181 KKFGLVDNIISSRD 194
>gi|229161662|ref|ZP_04289642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228621907|gb|EEK78753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 140/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNTIPYVVEQTKLGERSYDIYSRLLKDRIIMIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G++ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKTGQSLERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
D+G+VD V+ +
Sbjct: 181 KDYGIVDDVVAKK 193
>gi|110633884|ref|YP_674092.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mesorhizobium
sp. BNC1]
gi|116243115|sp|Q11I48|CLPP2_MESSB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|110284868|gb|ABG62927.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chelativorans
sp. BNC1]
Length = 208
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQ+ RGERS+DI+SRLL+ERI+F+ GQ++D+ A L+CAQ+L LEAENP+KEI
Sbjct: 5 MNLIPMVVEQSARGERSFDIFSRLLRERIIFLNGQVDDNSAALVCAQMLHLEAENPKKEI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGGVV++G AIYDTMQFIK P++T C+G AASMGS LL AGE+GMR ALPNA I
Sbjct: 65 AFYINSPGGVVSSGFAIYDTMQFIKCPVATLCLGTAASMGSFLLMAGERGMRVALPNASI 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQP GGF GQASDIERHAQ++++ KRR+ +Y ++CG+ E+VE+TLDRD M+A +A
Sbjct: 125 ILHQPLGGFQGQASDIERHAQNVMRHKRRMIRLYAEHCGRAEEDVERTLDRDFFMTAEDA 184
Query: 196 CDWGVVDKVLMSRI 209
+WG+VD V R
Sbjct: 185 REWGLVDHVYRRRA 198
>gi|148284741|ref|YP_001248831.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189183283|ref|YP_001937068.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
gi|146740180|emb|CAM80416.1| ATP-dependent protease proteolytic subunit [Orientia tsutsugamushi
str. Boryong]
gi|189180054|dbj|BAG39834.1| ATP-dependent Clp protease proteolytic subunit [Orientia
tsutsugamushi str. Ikeda]
Length = 206
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 123/198 (62%), Positives = 160/198 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VPMVVEQTNRGER+YDIYSRLLKERIVFV G+IEDHMA L+ AQLLFLEAE+P K+I +
Sbjct: 9 YVPMVVEQTNRGERAYDIYSRLLKERIVFVCGEIEDHMANLVVAQLLFLEAESPDKKIFM 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGMAIYDTMQ+IK P+ T C+GQA SMGSLLL+AG+K MR LPN+RI++
Sbjct: 69 YINSPGGAVTAGMAIYDTMQYIKSPVLTLCLGQACSMGSLLLAAGQKSMRHCLPNSRIMI 128
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGGF GQA+DI+ HAQ+I+K+K+ +N +YV + + + +E++++RD+ M A +
Sbjct: 129 HQPSGGFRGQATDIQIHAQEILKMKKIINNLYVHHTNQPLQVIEESMERDNFMDPVAAKE 188
Query: 198 WGVVDKVLMSRIDIEEKS 215
+G+VD + R + E+
Sbjct: 189 FGLVDHITTERAQVAERK 206
>gi|269123536|ref|YP_003306113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptobacillus moniliformis DSM 12112]
gi|268314862|gb|ACZ01236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptobacillus moniliformis DSM 12112]
Length = 192
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 103/192 (53%), Positives = 143/192 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP ++E GER+YDIYSRLLK+RI+F++G+I MA I AQLLFL A++ +K+I
Sbjct: 1 MSLVPYIIENEGSGERTYDIYSRLLKDRIIFLSGEINTEMANAIIAQLLFLNAQDKEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++YINSPGG+VTAG IYDTM I + T C+G AASMG+ LLS+G KG RFALPN+ +
Sbjct: 61 TMYINSPGGMVTAGFGIYDTMNHISCDVVTVCIGMAASMGAFLLSSGTKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ A++I+K K +L EI KN G+++E++ +RD+ +SA EA
Sbjct: 121 MIHQPLGGARGQATDIQIVAENILKTKHKLAEILSKNTGQSFEKIISDTERDNYLSAEEA 180
Query: 196 CDWGVVDKVLMS 207
+G+VDKVL
Sbjct: 181 VAYGLVDKVLEK 192
>gi|33240370|ref|NP_875312.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460522|sp|Q7VC22|CLPP1_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33237897|gb|AAP99964.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 196
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+VVE+T RGER++DIYSRLL+ERIVF+ Q+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVVEETGRGERAFDIYSRLLRERIVFLGEQVTNDSANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G I+DT+Q IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGFGIFDTIQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DI A +I+ +K++LN G+ ++ + DRD MS SEA
Sbjct: 121 HQPLGGARGQATDIRIQADEILFLKQKLNTELSNRTGQPLSKIAEDTDRDFYMSPSEAIS 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGIIDNVLNKKP 192
>gi|297737943|emb|CBI27144.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 106/189 (56%), Positives = 149/189 (78%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+E ++RGER+YDI+SRLLKERIV + G I D A ++ AQLLFLE+ENP K I +Y+N
Sbjct: 1 MVIEHSSRGERAYDIFSRLLKERIVCINGPISDDTAHVVVAQLLFLESENPSKPIHMYLN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG V+AG+AIYDTMQ+I+ P++T C+GQAASMGSLLL+AG KG R ALPNA I++HQP
Sbjct: 61 SPGGAVSAGLAIYDTMQYIRSPVNTICLGQAASMGSLLLAAGAKGERRALPNATIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG+SGQA D+ H + I+++ LN +Y K+ G++ + ++K +DRD+ M+ EA ++G+
Sbjct: 121 SGGYSGQAKDMTIHTKQIIRVWDSLNALYAKHTGQSLDIIQKNMDRDYFMTPEEAKEFGI 180
Query: 201 VDKVLMSRI 209
+D+V+ R
Sbjct: 181 IDEVIDQRP 189
>gi|226489629|emb|CAX74965.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 253
Score = 224 bits (572), Expect = 5e-57, Method: Composition-based stats.
Identities = 114/201 (56%), Positives = 161/201 (80%), Gaps = 2/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+V+++T GER+YDIYSRLLK+RI+ + G I D +A L+ AQLL+L++E+ + I
Sbjct: 46 MSLVPIVLDKTTHGERAYDIYSRLLKDRIICLMGSISDEVAGLVVAQLLYLQSEDKKIPI 105
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQFIKPP++T+C+GQA+SMGSLLL+AG G+RFALP++RI
Sbjct: 106 HIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRI 165
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSG GQASDI+ HA++I+K++ +N IY ++ ++ E +EK +DRD+ M+A EA
Sbjct: 166 MVHQPSGSAHGQASDIKIHAEEIIKMRNIINTIYERHTKQSQEVIEKWMDRDYFMTAEEA 225
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G+VD VL R +KSK
Sbjct: 226 VSFGIVDMVL--REAPADKSK 244
>gi|113953920|ref|YP_730624.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113881271|gb|ABI46229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 196
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQLLFLEAE+P+KEI L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YVNSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQASDI A +I+ +K RLN G+ ++++ DRD MS +A +
Sbjct: 121 HQPLGGASGQASDIRIQADEILFLKDRLNHELADRTGQPLDKIQADTDRDFFMSPQQAME 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+
Sbjct: 181 YGLIDNVIDKSP 192
>gi|228934064|ref|ZP_04096905.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228825578|gb|EEM71370.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
Length = 198
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGTKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KAYGIVDDVVAKK 198
>gi|239948026|ref|ZP_04699779.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
gi|239922302|gb|EER22326.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsia
endosymbiont of Ixodes scapularis]
Length = 201
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 123/201 (61%), Positives = 165/201 (82%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQT+RGER+YDIYSRLLKERI+FV +EDHM LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMTNLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGV+TAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVITAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTRQELKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G++D ++ SR + +K
Sbjct: 181 KKFGIIDNIISSRDAMTMSAK 201
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 106/188 (56%), Positives = 142/188 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VPMVVEQ+ GER++DIYSRLL+ERIVF+ I+D +A + AQLLFL+AE+ K+I L
Sbjct: 5 VVPMVVEQSGMGERAFDIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQL 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AGMAIYDTMQ I+P + T C G AASMG+ LLS G KG R ALP++RI++
Sbjct: 65 YINSPGGSVYAGMAIYDTMQQIRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMI 124
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA DIE A++I+ IK +LN + + G+ +++V + +RD MSA EAC
Sbjct: 125 HQPLGGAQGQAVDIEIQAKEILYIKDKLNTLIADHTGQPFDKVAEDTERDFYMSAEEACQ 184
Query: 198 WGVVDKVL 205
+G++D+V+
Sbjct: 185 YGLIDQVI 192
>gi|195384926|ref|XP_002051163.1| GJ13731 [Drosophila virilis]
gi|194147620|gb|EDW63318.1| GJ13731 [Drosophila virilis]
Length = 254
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 119/208 (57%), Positives = 158/208 (75%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
C+ + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQL
Sbjct: 15 AACSTQAPHVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFL++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG
Sbjct: 75 LFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGA 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
GMR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ Y+E+
Sbjct: 135 PGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNNYDEMCAR 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDI 211
++RDH M+ EA G++D VL +
Sbjct: 195 MERDHFMTPEEAKTLGIIDHVLEHPPET 222
>gi|146329429|ref|YP_001209154.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dichelobacter
nodosus VCS1703A]
gi|166201820|sp|A5EWF5|CLPP_DICNV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146232899|gb|ABQ13877.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dichelobacter
nodosus VCS1703A]
Length = 203
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 117/201 (58%), Positives = 156/201 (77%), Gaps = 1/201 (0%)
Query: 12 EDVFLGL-VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
D+ L +PMVVEQT RGER++DIYSRLLKER+VF+ G++ D A L+ AQLLFLEAEN
Sbjct: 1 MDIMNNLPIPMVVEQTGRGERAFDIYSRLLKERVVFLVGEVNDASANLVVAQLLFLEAEN 60
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I YINSPGG VTAGM+IYDTMQFIKP +ST +GQAASMG++LL+AG G R+AL
Sbjct: 61 PDQDIHFYINSPGGSVTAGMSIYDTMQFIKPDVSTMVLGQAASMGAVLLAAGAAGKRYAL 120
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+R+++HQP GGF GQASDI+ HA++I+ I+ RLN+I K+ G+ E + + +RD+ M
Sbjct: 121 PNSRVMIHQPLGGFRGQASDIDIHAREILFIRERLNQILAKHSGQDLETISRDTERDNFM 180
Query: 191 SASEACDWGVVDKVLMSRIDI 211
SA A ++G+VD +L R +
Sbjct: 181 SAERAQEYGLVDAILTHRESV 201
>gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 196
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 137/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN+ + + E++++ DRD MS EA D
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKNRLNQELAERTSQPLEKIQEDTDRDFFMSPHEAAD 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|87302740|ref|ZP_01085551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282623|gb|EAQ74581.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 196
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E + RGER++DIYSRLL+ERI+F+ + A + AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEDSGRGERAFDIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLTAGAKGKRSSLHHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K +LN G+ + ++ DRD MS +EA
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKDKLNRELSDRTGQPLDRIQIDTDRDFFMSPAEAVS 180
Query: 198 WGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 YGLIDKVIEKRP 192
>gi|229110239|ref|ZP_04239813.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229128131|ref|ZP_04257113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228655406|gb|EEL11262.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228673225|gb|EEL28495.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
Length = 198
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E+ + +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+
Sbjct: 2 EEFKMNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDA 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALP
Sbjct: 62 EKDIYLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+
Sbjct: 122 NSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA +G+VD V+ +
Sbjct: 182 AEEAKAYGIVDDVVTKK 198
>gi|160871940|ref|ZP_02062072.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsiella
grylli]
gi|159120739|gb|EDP46077.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rickettsiella
grylli]
Length = 220
Score = 224 bits (571), Expect = 6e-57, Method: Composition-based stats.
Identities = 121/206 (58%), Positives = 156/206 (75%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
E LVPMVVEQT RGER+YDIYSRLLK+RI+FV G IEDHMA LI AQ+LFLE+E
Sbjct: 7 SKEKTNSLLVPMVVEQTGRGERAYDIYSRLLKDRIIFVVGPIEDHMANLIIAQMLFLESE 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
NP K+ISLYINSPGGVVT+G+AIYDTMQFIKP +ST C+GQAAS +LLL G KG R
Sbjct: 67 NPDKDISLYINSPGGVVTSGLAIYDTMQFIKPDVSTMCIGQAASAAALLLCGGTKGKRHC 126
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LP+AR+++HQP GG+ GQA+DIE H ++++ ++ R+N I K+ GK E++ + DRD+
Sbjct: 127 LPHARMMIHQPLGGYQGQATDIEIHTREMLLVRERINSIMSKHTGKNTEQILRDTDRDNF 186
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKS 215
M A +A D+G++D VL R + +
Sbjct: 187 MGAQQAIDYGLIDAVLTMRSEERARE 212
>gi|320535322|ref|ZP_08035441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
phagedenis F0421]
gi|320147822|gb|EFW39319.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
phagedenis F0421]
Length = 203
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 111/198 (56%), Positives = 149/198 (75%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP V+EQT GERSYDI+SRLLK+RI+FV G+I D +A LI AQLLFLE++NP
Sbjct: 2 NEKMHTLVPYVIEQTGNGERSYDIFSRLLKDRIIFVDGEINDTVADLIVAQLLFLESQNP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG VTAG+AIYDTMQ I+P I T C+GQAASM ++LL+ G G RFALP
Sbjct: 62 DKDISLYINSPGGSVTAGLAIYDTMQHIRPKIQTICLGQAASMAAVLLAGGSAGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++R+++HQP GG GQASDI A++I+++K+ + + ++ GK+ +EV ++RD MS
Sbjct: 122 SSRVMIHQPWGGVQGQASDISIQAKEIIRLKKLTIKYFAEHTGKSEKEVADDMERDFFMS 181
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G+VD V+ R
Sbjct: 182 AEEAKAYGIVDTVMNRRK 199
>gi|72383092|ref|YP_292447.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|115311351|sp|Q46ID4|CLPP3_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|72002942|gb|AAZ58744.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 194
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 96/190 (50%), Positives = 143/190 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ +G+R++DIYSRLL+ERI+F+ + D +A + AQ+LFLEA++P+K+I L
Sbjct: 1 MLPTVIEQSGQGDRAFDIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG VTAG+AIYDTMQ + P + T C G AASMG+ LLS G KG R ALPN+RI++
Sbjct: 61 YVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA +IE A++I+ +K LN + ++ G+ +++ + DRDH +S EA +
Sbjct: 121 HQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVE 180
Query: 198 WGVVDKVLMS 207
+G++DKV+ +
Sbjct: 181 YGLIDKVVSN 190
>gi|257456332|ref|ZP_05621529.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
vincentii ATCC 35580]
gi|257446418|gb|EEV21464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
vincentii ATCC 35580]
Length = 201
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 110/198 (55%), Positives = 148/198 (74%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP V+EQT GERSYDI+SRLLK+RI+FV G+I D A L+ AQLLFLE++NP
Sbjct: 2 SEQMHSLVPYVIEQTGNGERSYDIFSRLLKDRIIFVDGEITDATADLVVAQLLFLESQNP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+ISLYINSPGG VTAG+A+YDTMQ I P + T C+GQAASM ++LL+ G KG RFALP
Sbjct: 62 DKDISLYINSPGGSVTAGLAVYDTMQHIHPNVQTICLGQAASMAAVLLAGGSKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++R+++HQP GG GQASDI A++I+++K+ + + + GKT V + ++RD MS
Sbjct: 122 SSRVMIHQPWGGAQGQASDITIQAREILRLKKLIIQYCAHHTGKTESAVAEDMERDFFMS 181
Query: 192 ASEACDWGVVDKVLMSRI 209
A EAC++G+VD V+ R
Sbjct: 182 AQEACEYGIVDMVMDRRK 199
>gi|228997711|ref|ZP_04157318.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228762055|gb|EEM10994.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
Length = 194
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 138/194 (71%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+
Sbjct: 1 MMNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+
Sbjct: 61 IFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V +RD+ M+A E
Sbjct: 121 IMIHQPLGGVKGQATEIEITAKRILKLKHDINKIISDRTGQPVEKVALDTERDYFMTAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G+VD V+ +
Sbjct: 181 AKIYGIVDAVIEKK 194
>gi|29840675|ref|NP_829781.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
caviae GPIC]
gi|33300938|sp|Q821M0|CLPP2_CHLCV RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|29835025|gb|AAP05659.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila
caviae GPIC]
Length = 203
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 100/200 (50%), Positives = 150/200 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+
Sbjct: 61 KVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L I + G++ E++ + +RD M A EA
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQSVEKIIEDSERDFFMGAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S D ++K
Sbjct: 181 ISYGLIDKVVSSAKDTKDKD 200
>gi|325680788|ref|ZP_08160326.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
gi|324107568|gb|EGC01846.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
Length = 196
Score = 224 bits (571), Expect = 7e-57, Method: Composition-based stats.
Identities = 106/196 (54%), Positives = 149/196 (76%), Gaps = 3/196 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGERS DI+SRLL +RI+ + I+DH+A+L+ AQLLFLE+++P+K+I
Sbjct: 1 MALVPYVVEQTSRGERSMDIFSRLLNDRIIMLCEPIDDHVASLVTAQLLFLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDTM +IK ++T CMG AASMG+ LLS G KG RF+LPN+ I
Sbjct: 61 DLYINSPGGSVTAGMAIYDTMNYIKCDVNTICMGMAASMGAFLLSCGTKGKRFSLPNSEI 120
Query: 136 LLHQPSG---GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP G SGQ +D++ H+ +V + +LN+I +N GK+ E++ +RD+ +SA
Sbjct: 121 MIHQPLIGGGGISGQCTDVKIHSDHLVATREKLNKILAENTGKSIEQIAIDTERDNYLSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++DKV+ R
Sbjct: 181 QEAMEYGLIDKVISKR 196
>gi|331701681|ref|YP_004398640.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
buchneri NRRL B-30929]
gi|329129024|gb|AEB73577.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
buchneri NRRL B-30929]
Length = 197
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 103/197 (52%), Positives = 150/197 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ+ GER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSAGGERAYDIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+GMAIYDTM F+K + T MG AASM S+L S+G KG RFALP+A++
Sbjct: 61 YLYINSPGGVITSGMAIYDTMNFVKSDVQTIVMGMAASMASVLASSGAKGKRFALPHAQV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A++I+K ++ +N + +N G+ E++ K +RD+ ++A EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIAAEEILKARKMINNLLAENSGQPIEKINKDTERDNYLTAQEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ S + +
Sbjct: 181 VDYGLLDGIMTSSSEKQ 197
>gi|33865835|ref|NP_897394.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460510|sp|Q7U6N7|CLPP2_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33633005|emb|CAE07816.1| ATP-dependent Clp protease proteolytic subunit 1 [Synechococcus sp.
WH 8102]
Length = 197
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN+ G+ + +++ DRD MS EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKERLNQELSDRTGQPLDRIQQDTDRDFFMSPGEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|218440073|ref|YP_002378402.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218172801|gb|ACK71534.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 229
Score = 224 bits (570), Expect = 8e-57, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 150/197 (76%), Gaps = 1/197 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P+V+EQ+ GER++DIYSRLL+ERIVF+ I+D++A I AQLL+L+AE+P+K+I
Sbjct: 25 NILPVVIEQSGMGERAFDIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQ 84
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+AIYDTMQ I+P + T C G AASMG+ LLS G KG R ALP+AR++
Sbjct: 85 IYINSPGGSVYAGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARMM 144
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA +I+ A++I+ IK+RLN + ++ G+ Y+ + + +RD MSA +A
Sbjct: 145 IHQPIGGAQGQAVEIDIQAKEILYIKQRLNTLLAEHTGQPYDRIAEDTERDFYMSAYDAK 204
Query: 197 DWGVVDKVLMSRIDIEE 213
++G++D+V+ R ++ +
Sbjct: 205 NYGLIDQVIA-RSELPD 220
>gi|125591043|gb|EAZ31393.1| hypothetical protein OsJ_15521 [Oryza sativa Japonica Group]
Length = 221
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 115/189 (60%), Positives = 152/189 (80%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+E T+RGER+YDI+SRLLKERIV + G I D A+L+ AQLLFLE+ENP K + LYIN
Sbjct: 1 MVIEHTSRGERAYDIFSRLLKERIVCIHGPITDDTASLVVAQLLFLESENPAKPVHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ+I+ P++T C+GQAASM SLLL+AG +G R ALPNAR+++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYIRSPVTTLCIGQAASMASLLLAAGARGERRALPNARVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG SGQASDI HA++I+K++ RLN+IY K+ + + +E+ ++RD M EA DWG+
Sbjct: 121 SGGASGQASDIAIHAKEILKVRDRLNKIYAKHTSQAIDRIEQCMERDMFMDPEEAHDWGL 180
Query: 201 VDKVLMSRI 209
+D+V+ R
Sbjct: 181 IDEVIEHRP 189
>gi|266623582|ref|ZP_06116517.1| Clp protease [Clostridium hathewayi DSM 13479]
gi|288864626|gb|EFC96924.1| Clp protease [Clostridium hathewayi DSM 13479]
Length = 195
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 103/194 (53%), Positives = 145/194 (74%), Gaps = 1/194 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T++GERSYD++SRLLK+RI+F+ ++ D A L AQ+LFLEAE+P K+I
Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S YINSPGG +TAG+AIYDTM++I+ +ST C+G AAS G+ LL+ G KG RFALPNA I
Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYIRCDVSTICIGLAASFGAFLLAGGTKGKRFALPNAEI 120
Query: 136 LLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++HQP G+A+DI+ +++ + + KRRLN I +N G+T EE+ + +RDH MSA E
Sbjct: 121 MIHQPAVEKIGGKATDIQIYSEKLQRDKRRLNRILAENTGRTEEEIWRDTERDHFMSAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G++D V+ R
Sbjct: 181 AKAYGIIDTVMQKR 194
>gi|116074798|ref|ZP_01472059.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068020|gb|EAU73773.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 196
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQASDI A +I+ +K +LN + G+ E+++ DRD MS EA
Sbjct: 121 HQPLGGASGQASDIRIQADEILFLKDKLNRELAERSGQPLEKMQVDTDRDFFMSPDEAVT 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDTVIDRRP 192
>gi|78212970|ref|YP_381749.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|78197429|gb|ABB35194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
Length = 218
Score = 224 bits (570), Expect = 9e-57, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 139/198 (70%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ ++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P
Sbjct: 16 DPTVAQMIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDP 75
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L
Sbjct: 76 EKDIYLYINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQ 135
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQASDI A +I+ +K RLN+ G+T + +++ DRD MS
Sbjct: 136 HSRIMIHQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMS 195
Query: 192 ASEACDWGVVDKVLMSRI 209
+EA ++G++D V+ R
Sbjct: 196 PTEAMNYGLIDSVIDKRP 213
>gi|238650581|ref|YP_002916433.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
gi|259585964|sp|C4K1D4|CLPP_RICPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238624679|gb|ACR47385.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia
peacockii str. Rustic]
Length = 201
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 125/194 (64%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+VVE T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVVEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD ++ SR
Sbjct: 181 KKFGLVDNIMSSRD 194
>gi|229009066|ref|ZP_04166405.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228752236|gb|EEM01925.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
Length = 194
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 138/194 (71%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+
Sbjct: 1 MMNTIPYVVEQTKLGERSYDIYSRLLKDRIVMIGSEINDQVASSVVAQLLFLEAEDAEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL AG KG RFALPN+
Sbjct: 61 IFLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA++IE A+ I+K+K +N+I G+ E+V +RD+ M+A E
Sbjct: 121 IMIHQPLGGVKGQATEIEITAKRILKLKHDINKIISDRTGQPIEKVALDTERDYFMTAEE 180
Query: 195 ACDWGVVDKVLMSR 208
A +G+VD V+ +
Sbjct: 181 AKIYGIVDAVIEKK 194
>gi|51473702|ref|YP_067459.1| ATP-dependent Clp protease proteolytic subunit [Rickettsia typhi
str. Wilmington]
gi|60389549|sp|Q68WL5|CLPP_RICTY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51460014|gb|AAU03977.1| Caseinolytic protease [Rickettsia typhi str. Wilmington]
Length = 201
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 122/194 (62%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+V+EQT+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYIPVVIEQTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQFIKP ++T C+GQA SMGSLLL GE GMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQFIKPKVATLCIGQACSMGSLLLCGGEHGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HA++ +KIK+ LNE+Y K+ + + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHARETLKIKKLLNELYSKHTEQALKHIEKSMERDNFMSPGEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD ++ SR
Sbjct: 181 KKFGLVDNIISSRD 194
>gi|303232754|ref|ZP_07319439.1| Clp protease [Atopobium vaginae PB189-T1-4]
gi|302481240|gb|EFL44315.1| Clp protease [Atopobium vaginae PB189-T1-4]
Length = 204
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/197 (49%), Positives = 139/197 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P V+EQT RGERSYDIYSRLL +RIVF+ ++ A L+ AQLL LE+++P K+IS
Sbjct: 8 PLIPYVIEQTPRGERSYDIYSRLLNDRIVFLGEEVTRDSANLVIAQLLHLESQDPDKDIS 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGG V AG+ I DTM FIKP +ST C+G A SM S+LL+AG KG R LPN+ ++
Sbjct: 68 LYIDSPGGEVYAGLGILDTMNFIKPDVSTICVGMACSMASVLLAAGAKGKRMCLPNSMVM 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPS G GQ +DI+ A + I+ LNE+ G+T E + + +RD+ + A +A
Sbjct: 128 IHQPSSGAQGQQTDIQIVADETKWIREHLNELLASYTGQTKERINEDTERDNYLRAQDAL 187
Query: 197 DWGVVDKVLMSRIDIEE 213
++G+VDKV+ +R +++
Sbjct: 188 EYGLVDKVITTRAALQK 204
>gi|167748739|ref|ZP_02420866.1| hypothetical protein ANACAC_03513 [Anaerostipes caccae DSM 14662]
gi|167651709|gb|EDR95838.1| hypothetical protein ANACAC_03513 [Anaerostipes caccae DSM 14662]
Length = 202
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 144/200 (72%), Gaps = 3/200 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQTN+GERSYDI+SRLL +RI+F+ ++ D A+LI AQ+LFLEA++P ++I
Sbjct: 1 MSTIPYVIEQTNQGERSYDIFSRLLSDRIIFLGEEVSDISASLIVAQMLFLEAQDPGRDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDTM++I+ ++T C+G AAS G+ LL+ G +G R ALPNA I
Sbjct: 61 QLYINSPGGSVTAGFAIYDTMKYIQCDVATICVGLAASFGAFLLAGGTQGKRMALPNAEI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP+ G ASDI+ + + K K+RLN I +N G++ EE+E+ DRDH MSA
Sbjct: 121 MIHQPAIHGNGIQGPASDIKIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSA 180
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA +G++D V+ R +
Sbjct: 181 EEALKYGLIDSVISKRQKKQ 200
>gi|15618756|ref|NP_225042.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae CWL029]
gi|15836380|ref|NP_300904.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae J138]
gi|16752192|ref|NP_445559.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae AR39]
gi|33242207|ref|NP_877148.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae TW-183]
gi|6831514|sp|Q9Z759|CLPP2_CHLPN RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4377162|gb|AAD18985.1| CLP Protease Subunit [Chlamydophila pneumoniae CWL029]
gi|7189935|gb|AAF38798.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila
pneumoniae AR39]
gi|8979221|dbj|BAA99055.1| CLP protease subunit [Chlamydophila pneumoniae J138]
gi|33236718|gb|AAP98805.1| ATP-dependent clp protease proteolytic subunit [Chlamydophila
pneumoniae TW-183]
gi|269302633|gb|ACZ32733.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Chlamydophila pneumoniae LPCoLN]
Length = 203
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/199 (49%), Positives = 146/199 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R ALP++R+
Sbjct: 61 QIFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRHALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A EA
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+G++DKV+ S + +
Sbjct: 181 ISYGLIDKVVTSAKETNKD 199
>gi|34581620|ref|ZP_00143100.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
gi|20137864|sp|Q92HM5|CLPP_RICCN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28263005|gb|EAA26509.1| ATP-dependent clp protease proteolytic subunit [Rickettsia sibirica
246]
Length = 201
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 124/194 (63%), Positives = 162/194 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+E T+RGER+YDIYSRLLKERI+FV +EDHMA LI AQLLFLEAENP+K+I
Sbjct: 1 MSYVPIVIEPTSRGERAYDIYSRLLKERIIFVCSTVEDHMANLIVAQLLFLEAENPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQ+IKP ++T C+GQA SMGSLLL GEKGMR++LP++RI
Sbjct: 61 YMYINSPGGVVTAGLAIYDTMQYIKPKVATLCIGQACSMGSLLLCGGEKGMRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG+ GQA+DIE HAQ+ +KIKR LNE+Y K+ + + +EK+++RD+ MS EA
Sbjct: 121 MIHQPSGGYKGQATDIEIHAQETLKIKRLLNELYSKHTEQELKHIEKSMERDNFMSPEEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G+VD ++ SR
Sbjct: 181 KKFGLVDNIMSSRD 194
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 146/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+EQ+ RGER++DIYSRLL++RI+++ I+ +A LI QLL+L++E+P+K+I L
Sbjct: 1 MIPTVIEQSGRGERAFDIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGM IYDTM+ ++P + T CMG AASMG+ LLS G KG R +LP++RI++
Sbjct: 61 YINSPGGSVSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ +K+ LNE ++ G++ E++ + +RD MSA+EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAME 180
Query: 198 WGVVDKVLMSRI 209
+G++D+V
Sbjct: 181 YGIIDQVYNRNP 192
>gi|32476643|ref|NP_869637.1| ATP-dependent Clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|67460512|sp|Q7UK66|CLPP2_RHOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|32447189|emb|CAD77015.1| ATP-dependent clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|327540248|gb|EGF26837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodopirellula baltica WH47]
Length = 195
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 105/195 (53%), Positives = 153/195 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P VVE R ER+YDIYSRLLK+RI+F+ Q++D ++ + AQ+LFL+A++P+K+I
Sbjct: 1 MPVIPYVVESNGREERTYDIYSRLLKDRIIFLGQQVDDQISNALVAQMLFLQADDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQF+ ++T+C+GQAASMG++LL+AG KG RFALPNARI
Sbjct: 61 HMYINSPGGSITAGMAIYDTMQFVSCDVATYCIGQAASMGAVLLTAGAKGKRFALPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G G A ++E H ++ +IK+R+NEI +++ G + E++E+ DRD MSA EA
Sbjct: 121 MIHQPLAGMQGTAREVEIHVAELRRIKQRMNEIMIEHTGHSLEKIEEDTDRDRFMSADEA 180
Query: 196 CDWGVVDKVLMSRID 210
C +G++DKV+ S D
Sbjct: 181 CSYGLIDKVVKSVDD 195
>gi|228959022|ref|ZP_04120723.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228800683|gb|EEM47599.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 198
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 138/193 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 6 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 65
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 66 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 125
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 126 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 186 KVYGIVDDVVTKK 198
>gi|167769421|ref|ZP_02441474.1| hypothetical protein ANACOL_00751 [Anaerotruncus colihominis DSM
17241]
gi|167668389|gb|EDS12519.1| hypothetical protein ANACOL_00751 [Anaerotruncus colihominis DSM
17241]
Length = 189
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 105/189 (55%), Positives = 142/189 (75%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQTNRGERSYDI+SRLL +RIV + ++ D A+L+ AQLL+LE ++P K+I+LYIN
Sbjct: 1 MVVEQTNRGERSYDIFSRLLNDRIVMLCDEVNDTTASLVVAQLLYLEGQDPDKDINLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGMAIYDTM F+K +ST C+G AASMG+ L AG KG R ALPNA I++HQP
Sbjct: 61 SPGGSVTAGMAIYDTMNFVKCDVSTTCIGLAASMGAFLFGAGAKGKRIALPNAEIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG GQASD++ H I++ + +LN I + G+ E +E+ +RD+ M+A +A ++G+
Sbjct: 121 SGGARGQASDMKIHTDWIIRTREKLNRIMAEQTGQPIEVIERDTERDNFMTAQQAMEYGL 180
Query: 201 VDKVLMSRI 209
VDK++ R
Sbjct: 181 VDKIIAHRE 189
>gi|320332658|ref|YP_004169369.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus
maricopensis DSM 21211]
gi|319753947|gb|ADV65704.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus
maricopensis DSM 21211]
Length = 201
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 147/201 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT RGER YDIYSRLLK+RI+F+ I+ +A I AQLL L+++NP++EI
Sbjct: 1 MSVIPYVIEQTGRGERMYDIYSRLLKDRIIFLGTPIDSQVANTIVAQLLLLDSQNPEREI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V AG+AIYDTM++IK P+ST C+G A SMGS++L AG+KG R ALPN+RI
Sbjct: 61 QLYINSPGGEVYAGLAIYDTMRYIKAPVSTICVGIAMSMGSVILMAGDKGKRSALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ S GF G D+E A++ + ++ RL +IY ++ +E++ + ++RD+ MS EA
Sbjct: 121 MIHQGSSGFRGNTPDVEVQAKETLYLRDRLVDIYHRHTSLPHEKLLRDMERDYFMSPGEA 180
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
+G++D V+ + + +++
Sbjct: 181 QQYGLIDAVIEHTREAQSENE 201
>gi|196010065|ref|XP_002114897.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190582280|gb|EDV22353.1| expressed hypothetical protein [Trichoplax adhaerens]
Length = 226
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 108/204 (52%), Positives = 158/204 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
LVP+V+E+T RGE++YDIYSRLLK+RIV V G + D +A+L+ AQLLFL+AE+ +
Sbjct: 22 PRISPLVPIVIEKTGRGEQAYDIYSRLLKDRIVCVMGPVTDDLASLVVAQLLFLQAESSK 81
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
I +YINSPGG VT+G+ IYDTMQ+++PPI T+C+GQAASMGSLLL+AG+ G R +LPN
Sbjct: 82 LPIHMYINSPGGSVTSGLGIYDTMQYVEPPIYTWCVGQAASMGSLLLAAGDNGKRHSLPN 141
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSG GQA+DI A++I+K+K+ +N++Y K+ G++ E +E+ ++RD M
Sbjct: 142 SRIMIHQPSGQAFGQATDIAIQAEEIIKLKKLINDLYKKHTGQSIENIEEAMERDKYMFP 201
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
+EA +G++DKVL I+E ++
Sbjct: 202 NEAAAFGLIDKVLSRPQAIKEMTE 225
>gi|89897901|ref|YP_515011.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila felis
Fe/C-56]
gi|116243099|sp|Q256C2|CLPP1_CHLFF RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|89331273|dbj|BAE80866.1| ATP-dependent Clp endopeptidase, ATP-binding proteolytic subunit 2
[Chlamydophila felis Fe/C-56]
Length = 203
Score = 223 bits (569), Expect = 1e-56, Method: Composition-based stats.
Identities = 100/200 (50%), Positives = 149/200 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+PQK+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPQKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+
Sbjct: 61 KVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A +A
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEDA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S D ++K
Sbjct: 181 ISYGLIDKVVSSAKDTKDKD 200
>gi|227510637|ref|ZP_03940686.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
brevis subsp. gravesensis ATCC 27305]
gi|227513652|ref|ZP_03943701.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
buchneri ATCC 11577]
gi|227524797|ref|ZP_03954846.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
hilgardii ATCC 8290]
gi|227083168|gb|EEI18480.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
buchneri ATCC 11577]
gi|227088053|gb|EEI23365.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
hilgardii ATCC 8290]
gi|227190289|gb|EEI70356.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
brevis subsp. gravesensis ATCC 27305]
Length = 214
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 106/206 (51%), Positives = 154/206 (74%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
K D E + LVP V+EQ+ GER+YDIYSRLLK+RI+ ++G IED MA I AQLLFL
Sbjct: 9 HKIDKEAYSMNLVPTVIEQSANGERAYDIYSRLLKDRIIMLSGPIEDDMANAIIAQLLFL 68
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+A++ +K+I LYINSPGGV+T+GMAI+DTM F+K + T MG AASM S+L S+G KG
Sbjct: 69 DAQDSEKDIYLYINSPGGVITSGMAIFDTMNFVKADVQTIVMGMAASMASVLASSGAKGK 128
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFALP+A++L+HQPSGG GQ ++IE A++I+K ++ +NE+ KN G+ E++ K +R
Sbjct: 129 RFALPHAQVLIHQPSGGAQGQQTEIEIAAEEILKARKMINELLAKNSGQPIEKINKDTER 188
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
D+ ++A EA D+G++D ++ + + +
Sbjct: 189 DNYLTAQEAVDYGLLDGIMTNSSEKK 214
>gi|311030263|ref|ZP_07708353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus sp.
m3-13]
Length = 193
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 143/192 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ++RGERSYDIYSRLLK+RI+ + +I D +A + AQLLFL A++P+K+I
Sbjct: 1 MNTIPYVIEQSSRGERSYDIYSRLLKDRIIMIGEEINDQIANSVVAQLLFLAADDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG TAG AI DTM +IKP + T C+G AAS G++LL AG KG R ALPN+ I
Sbjct: 61 SIYINSPGGSTTAGFAILDTMHYIKPDVRTICIGMAASFGAMLLMAGTKGKRLALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K L+++ G+ E++E+ DRD+ M+A EA
Sbjct: 121 MIHQPLGGARGQATEIEISARRILKLKGDLHKMIADYTGQPIEKIERDTDRDNFMTAGEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 181 KEYGIIDEVIKK 192
>gi|307637483|gb|ADN79933.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter pylori
908]
Length = 195
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 112/195 (57%), Positives = 152/195 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G +P V+E T RGERSYDIYSRLLK+RIV ++G+I D +A+ I AQLLFLEAE+P+K+I
Sbjct: 1 MGYIPYVIENTERGERSYDIYSRLLKDRIVLLSGEINDSVASSIVAQLLFLEAEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+T+G++IYDTM FI+P +ST C+GQAASMG+ LLS G KG RF+LP++RI
Sbjct: 61 GLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQAASMGAFLLSCGAKGKRFSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE + +I+++K +N I +N G++ E++ K DRD MSA EA
Sbjct: 121 MIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQNSGQSLEQIAKDTDRDFYMSAKEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G+ KVL +
Sbjct: 181 KEYGLFYKVLQKNVK 195
>gi|298531141|ref|ZP_07018542.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
gi|298509164|gb|EFI33069.1| Endopeptidase Clp [Desulfonatronospira thiodismutans ASO3-1]
Length = 213
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 110/199 (55%), Positives = 156/199 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ PMV+ R ERSYDI+SRLLK+RI+F+ ++D +A L+CAQLLFLE+E+ + EI
Sbjct: 1 MKYTPMVIHSEGRNERSYDIFSRLLKDRIIFIGVPVDDQLANLVCAQLLFLESESSEMEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGG VTAGMAIYD++Q+I P++T CMGQA+SMG+LLL+AG+KGMR+ALP++RI
Sbjct: 61 NLYINSPGGSVTAGMAIYDSIQYISAPVATLCMGQASSMGALLLAAGQKGMRYALPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQP GGF GQA+DI+ HA++I++IK+ +N I + GK VE +DRD+ M +EA
Sbjct: 121 LIHQPLGGFQGQAADIDIHAREIIRIKQEINAIMAHHTGKDMATVEHDMDRDYFMGPAEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++D VL +R +E +
Sbjct: 181 KEYGIIDHVLTTRAGLEGR 199
>gi|329943257|ref|ZP_08292031.1| clp protease family protein [Chlamydophila psittaci Cal10]
gi|328814804|gb|EGF84794.1| clp protease family protein [Chlamydophila psittaci Cal10]
gi|328915097|gb|AEB55930.1| Clp protease [Chlamydophila psittaci 6BC]
Length = 203
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 99/200 (49%), Positives = 149/200 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K+I
Sbjct: 1 MTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+
Sbjct: 61 KVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRM 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A +A
Sbjct: 121 MIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEDA 180
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
+G++DKV+ S D ++K
Sbjct: 181 ISYGLIDKVVSSAKDTKDKD 200
>gi|254797097|ref|YP_003081935.1| Clp protease [Neorickettsia risticii str. Illinois]
gi|254590339|gb|ACT69701.1| Clp protease [Neorickettsia risticii str. Illinois]
Length = 209
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 118/209 (56%), Positives = 164/209 (78%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ LVPMVV+QT RGER+YDI+SRLLKER+VF+TG IED MA+LI AQLLFLE
Sbjct: 1 MDTLTREKMNLVPMVVDQTPRGERAYDIFSRLLKERVVFLTGPIEDGMASLIVAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I +YINSPGGVVTAG++IYDTMQ+I+P +ST C+GQAAS SL+L++G +G R
Sbjct: 61 AENPEKDIFMYINSPGGVVTAGLSIYDTMQYIRPSVSTVCVGQAASAASLILASGAEGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALP++R+++HQPSGG GQA+D+E H ++I+++KR +NEIY K+ G+T +++E L+RD
Sbjct: 121 FALPHSRVMVHQPSGGVRGQATDMEIHVKEILQLKRMINEIYRKHTGETIKKIETLLERD 180
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+S EA G++D ++ R + K +
Sbjct: 181 TFLSPEEAKKVGLIDDIITQRKEGSGKQE 209
>gi|116070498|ref|ZP_01467767.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116065903|gb|EAU71660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 197
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 98/192 (51%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQASDI A +I+ +K RLN G+ + +++ DRD MS SEA
Sbjct: 121 HQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPSEAVS 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|15639498|ref|NP_218948.1| ATP-dependent Clp protease proteolytic subunit [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189025737|ref|YP_001933509.1| ATP-dependent Clp protease proteolytic subunit [Treponema pallidum
subsp. pallidum SS14]
gi|6225161|sp|O83520|CLPP1_TREPA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|3322799|gb|AAC65495.1| ATP-dependent Clp protease proteolytic component (clpP-1)
[Treponema pallidum subsp. pallidum str. Nichols]
gi|189018312|gb|ACD70930.1| ATP-dependent Clp protease proteolytic component [Treponema
pallidum subsp. pallidum SS14]
gi|291059884|gb|ADD72619.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
pallidum subsp. pallidum str. Chicago]
Length = 203
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 147/197 (74%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP V+EQ+ GERSYDI+SRLLK+RI+FV G+I D +A L+ AQLLFLE++NP
Sbjct: 3 ERMHNLVPYVIEQSGGGERSYDIFSRLLKDRIIFVDGEITDAVADLVVAQLLFLESQNPD 62
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ISLYINSPGG VTAG+A+YDTMQ I P + T C+GQA+SM ++LL+ G G RFALP+
Sbjct: 63 KDISLYINSPGGAVTAGLAVYDTMQHICPEVQTICLGQASSMAAVLLAGGAPGKRFALPS 122
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GG GQASD+ AQ+I+++K + + G++ E+V + ++RD +SA
Sbjct: 123 SRVMIHQPWGGVQGQASDVCIQAQEILRLKTLTIAYFALHTGQSEEQVREDMERDFFLSA 182
Query: 193 SEACDWGVVDKVLMSRI 209
+AC +G+VD V+ R
Sbjct: 183 EQACSYGIVDTVMKRRK 199
>gi|194366563|ref|YP_002029173.1| ATP-dependent Clp protease proteolytic subunit [Stenotrophomonas
maltophilia R551-3]
gi|194349367|gb|ACF52490.1| Endopeptidase Clp [Stenotrophomonas maltophilia R551-3]
Length = 202
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 115/196 (58%), Positives = 158/196 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVE++ RGERSYDIYSRLL+ERI+F+ G+++D ++ L+CAQLLFLE+ENP+K I
Sbjct: 5 MQLIPMVVERSERGERSYDIYSRLLRERIIFLNGEVDDTVSALVCAQLLFLESENPEKPI 64
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGV+++G+A+YDTMQ+I P+ T CMG A SMGS LL AGE G R AL NA +
Sbjct: 65 HLYINSPGGVISSGLAMYDTMQYISAPVHTLCMGTARSMGSFLLMAGEPGHRAALANASL 124
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQASDI HA+++ + K+R+ +Y ++CG++ EEVE+TLDRD MSA +A
Sbjct: 125 HVHQPLGGVQGQASDIFIHAEEMQRTKQRITRLYAQHCGRSVEEVEQTLDRDRFMSAEQA 184
Query: 196 CDWGVVDKVLMSRIDI 211
C+WG++D+VL+ R +
Sbjct: 185 CEWGLIDQVLLRRDAL 200
>gi|20129427|ref|NP_609388.1| CG5045 [Drosophila melanogaster]
gi|7297671|gb|AAF52923.1| CG5045 [Drosophila melanogaster]
gi|21428864|gb|AAM50151.1| GH10833p [Drosophila melanogaster]
gi|220944040|gb|ACL84563.1| CG5045-PA [synthetic construct]
gi|220954028|gb|ACL89557.1| CG5045-PA [synthetic construct]
gi|223966793|emb|CAR93133.1| CG5045-PA [Drosophila melanogaster]
Length = 253
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 120/203 (59%), Positives = 158/203 (77%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++
Sbjct: 20 RANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQS 79
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR+
Sbjct: 80 ENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRY 139
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+ ++RDH
Sbjct: 140 SLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMSGRMERDH 199
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
M+ EA G++D VL +
Sbjct: 200 FMTPEEAKVLGIIDHVLEHPPET 222
>gi|308233830|ref|ZP_07664567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Atopobium
vaginae DSM 15829]
gi|328943800|ref|ZP_08241265.1| ATP-dependent Clp protease, protease subunit [Atopobium vaginae DSM
15829]
gi|327491769|gb|EGF23543.1| ATP-dependent Clp protease, protease subunit [Atopobium vaginae DSM
15829]
Length = 204
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 141/197 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+P VVEQT RGERSYDI+SRLL +RIVF+ I A L+ AQLL LE+++P K+I+
Sbjct: 8 PLIPYVVEQTPRGERSYDIFSRLLNDRIVFLGEAITRDSANLVIAQLLHLESQDPDKDIA 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGG V AG+ I DTM FIKP +ST C+G AASM S+LL+AG KG R LPN+ ++
Sbjct: 68 LYIDSPGGEVYAGLGILDTMNFIKPDVSTICVGMAASMASVLLAAGAKGKRMCLPNSMVM 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPS G GQ +DI+ A + I+ +NE+ + G+T E++ + +RD+ M A EAC
Sbjct: 128 IHQPSSGAQGQQTDIQIVADETKWIRNHMNELLAQYTGQTVEKINQDTERDNYMRAKEAC 187
Query: 197 DWGVVDKVLMSRIDIEE 213
D+G+VDKV+ SR + E
Sbjct: 188 DYGLVDKVITSRAEQAE 204
>gi|89055299|ref|YP_510750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Jannaschia sp.
CCS1]
gi|116243142|sp|Q28NI7|CLPP_JANSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88864848|gb|ABD55725.1| ATP-dependent Clp protease proteolytic subunit ClpP [Jannaschia sp.
CCS1]
Length = 208
Score = 223 bits (568), Expect = 1e-56, Method: Composition-based stats.
Identities = 122/202 (60%), Positives = 149/202 (73%), Gaps = 1/202 (0%)
Query: 8 KKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
D + F LVPMVVEQT+RGER+YDI+SRLLKERIVFV G + M+ LI AQLL L
Sbjct: 1 MHDPVEYFQNNLVPMVVEQTSRGERAYDIFSRLLKERIVFVNGPVHSGMSHLIVAQLLHL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
EAENP KEIS+YINSPGG VTAGM+IYDTMQ+IKP +ST G AASMGS++ GEKGM
Sbjct: 61 EAENPSKEISMYINSPGGEVTAGMSIYDTMQYIKPKVSTLVCGMAASMGSVIAVGGEKGM 120
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPNA L+HQPSGG G ASDI A+ I + RL ++YVK+ G+ YE V++ LDR
Sbjct: 121 RLALPNAEFLVHQPSGGARGTASDILISARSIEATRERLYQLYVKHTGQDYETVQRALDR 180
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D M+ A +WG VD+++ +R
Sbjct: 181 DTWMTPEVALEWGHVDEIVTTR 202
>gi|269926534|ref|YP_003323157.1| Endopeptidase Clp [Thermobaculum terrenum ATCC BAA-798]
gi|269790194|gb|ACZ42335.1| Endopeptidase Clp [Thermobaculum terrenum ATCC BAA-798]
Length = 210
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 146/196 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E TNRGER++DIYSRLLK+RI+ + I+D +A LI AQLLFL+AE+P+++I
Sbjct: 7 SLIPMVIETTNRGERAFDIYSRLLKDRIIILGTPIDDQIANLIIAQLLFLDAEDPERDIQ 66
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
YINSPGG +TAG+AIYDTMQF++P I T CMG AASM + LL+AG KG R+ALPNA I
Sbjct: 67 FYINSPGGSITAGLAIYDTMQFVRPDIVTICMGLAASMATPLLAAGTKGKRYALPNATIH 126
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H SGG G A+D+E+ A+ +++++RR+ E+ + G+ E +E DR+ M+ EA
Sbjct: 127 MHPASGGAQGAAADVEQQARFLIRMQRRVRELLAMHTGQPLERIEVDFDREKFMTPEEAK 186
Query: 197 DWGVVDKVLMSRIDIE 212
++G++D+++ S +
Sbjct: 187 EYGIIDEIMASTKQLP 202
>gi|295698387|ref|YP_003603042.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Riesia pediculicola USDA]
gi|291157158|gb|ADD79603.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Riesia pediculicola USDA]
Length = 196
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 114/196 (58%), Positives = 159/196 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+E+T GERSYDIYSRLLKERI+F+TG IED+MA LI +QLLFLE+EN KEI
Sbjct: 1 MSIIPTVIEKTVFGERSYDIYSRLLKERIIFLTGYIEDNMANLIISQLLFLESENQTKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG++T+G++IYDT+QFI P +ST C+GQA SMG+ LL++G KG R+ LPN+RI
Sbjct: 61 YLYINSPGGIITSGISIYDTIQFIMPKVSTICIGQACSMGAFLLASGAKGKRYCLPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G F GQA+DIE H ++I+K+K ++NE+ K+ GK E++EK +RD+ +S+ EA
Sbjct: 121 MIHQPMGSFRGQATDIEIHTKEIIKLKSKMNELMAKHTGKQVEQIEKDTERDYFLSSEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
D+G+VD+V ++R I
Sbjct: 181 VDYGLVDRVYLNRRSI 196
>gi|270156951|ref|ZP_06185608.1| ATP-dependent Clp protease proteolytic subunit ClpP [Legionella
longbeachae D-4968]
gi|289164625|ref|YP_003454763.1| ATP-dependent Clp protease proteolytic subunit [Legionella
longbeachae NSW150]
gi|269988976|gb|EEZ95230.1| ATP-dependent Clp protease proteolytic subunit ClpP [Legionella
longbeachae D-4968]
gi|288857798|emb|CBJ11642.1| ATP-dependent Clp protease proteolytic subunit [Legionella
longbeachae NSW150]
Length = 212
Score = 223 bits (568), Expect = 2e-56, Method: Composition-based stats.
Identities = 122/200 (61%), Positives = 162/200 (81%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
GLVPMV+EQT+RGERSYDIYSRLLKERI+F+ G++EDHMA L+ AQLLFLE+ENP+K+I
Sbjct: 13 SGLVPMVIEQTSRGERSYDIYSRLLKERIIFLLGEVEDHMANLVVAQLLFLESENPEKDI 72
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGGVVTAG+AIYDT+QFIKP +ST C+GQAAS +LLL AG G RF LPN+R+
Sbjct: 73 SLYINSPGGVVTAGLAIYDTIQFIKPDVSTLCIGQAASAAALLLCAGADGKRFCLPNSRV 132
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+ GQA+DIE HA++ + ++ RLN I K+ KT +++ + +RD+ MSA++A
Sbjct: 133 MIHQPLGGYRGQATDIEIHARETLTVRERLNNIMAKHTKKTPDQIMRDTERDNFMSATQA 192
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G++DKVL R +
Sbjct: 193 VEYGLIDKVLYDRESASKTE 212
>gi|218961379|ref|YP_001741154.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
gi|167730036|emb|CAO80948.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Candidatus Cloacamonas acidaminovorans]
Length = 194
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 154/194 (79%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+EQ R ER+YDIYSRLLK+RIVFV G IED++A + AQLL LE E+P+++I
Sbjct: 1 MSFVPIVIEQVGRTERAYDIYSRLLKDRIVFVGGVIEDNLANTVVAQLLHLEGEDPERDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG+++AG+AIYDTMQ+IKP +ST C+GQAASM ++LL+AG G R ALPN+RI
Sbjct: 61 YMYINSPGGIISAGLAIYDTMQYIKPRVSTICIGQAASMAAVLLAAGAPGKRSALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DIE A++I+ ++ R+NEI K+ G++ E++ + +R++ MSA EA
Sbjct: 121 MIHQPMGGAQGQATDIEIQAKEILYLRGRMNEILHKHSGQSIEKIMEDTERNYFMSAEEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D+V+ R
Sbjct: 181 MEYGIIDEVISVRK 194
>gi|296123572|ref|YP_003631350.1| endopeptidase Clp [Planctomyces limnophilus DSM 3776]
gi|296015912|gb|ADG69151.1| Endopeptidase Clp [Planctomyces limnophilus DSM 3776]
Length = 202
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 146/198 (73%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP V+E+ R ER+ DIYSRLL++RI+ + I+D +A I AQLLFL+ E+ + +
Sbjct: 1 MTNLVPYVIEKNGRDERAMDIYSRLLRDRIIILGSGIDDTVANTIVAQLLFLQFEDSKAD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +TAGMAIYDTMQ++ ++T+C+GQ ASMG+LLL+AG G R ALPN+R
Sbjct: 61 IHLYINSPGGSITAGMAIYDTMQYLSCDVATYCLGQCASMGALLLTAGAAGKRHALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP G G A+++E HA++++++KRR+NEI +K+ G+TY+++E+ DRD+ M E
Sbjct: 121 IMIHQPLAGMQGTATELEIHAKEVLRVKRRMNEILLKHTGQTYDQIERDTDRDNFMMPDE 180
Query: 195 ACDWGVVDKVLMSRIDIE 212
A +G++DK+L
Sbjct: 181 AKSYGLIDKILEKMPASP 198
>gi|225874969|ref|YP_002756428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium capsulatum ATCC 51196]
gi|254763781|sp|C1F6W4|CLPP_ACIC5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225792091|gb|ACO32181.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium capsulatum ATCC 51196]
Length = 196
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQTNRGER+YDIYSRLL++ I+F+ I+D +A L+ AQLLFL AE+P K+I
Sbjct: 1 MALVPMVIEQTNRGERAYDIYSRLLRDNIIFLGTPIDDQIANLVIAQLLFLSAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG+AIYDTMQFIK + T+C+GQAASMG+ LL +G G RFALPN+RI
Sbjct: 61 QLYINSPGGSITAGLAIYDTMQFIKNDVVTYCIGQAASMGAFLLMSGTAGKRFALPNSRI 120
Query: 136 LLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
L+HQPS G SGQA+DI+ HA++I++I+ N + K+ G++ E +E+ ++RD IM+A +
Sbjct: 121 LIHQPSMGGLSGQATDIDIHAREILRIREITNNLMSKHTGQSLERIERDVERDFIMNAPQ 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++D+++
Sbjct: 181 AKEYGIIDEIIDR 193
>gi|254722760|ref|ZP_05184548.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
anthracis str. A1055]
Length = 193
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 137/193 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYS LLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSSLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|307718289|ref|YP_003873821.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
gi|306532014|gb|ADN01548.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta
thermophila DSM 6192]
Length = 206
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 151/194 (77%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP+V+EQT GERSYDIYSRLLK+RIVF+ G+I D A L+ AQLLFLE+++P
Sbjct: 2 NERMSHLVPIVIEQTGMGERSYDIYSRLLKDRIVFIDGEINDLTADLVVAQLLFLESQDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+IS+YIN+PGG VTAG+AIYDTMQ++KP + T C+GQAASMG+LLL+AG G R ALP
Sbjct: 62 EKDISVYINTPGGSVTAGLAIYDTMQYVKPDVQTICLGQAASMGALLLTAGTPGKRLALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RIL+HQP GG GQA+DI A+++V+IK+ L + ++ G+ EEV + L+RD+ M+
Sbjct: 122 SSRILIHQPWGGVQGQATDISIQAREMVRIKKLLIHYFARHTGRPEEEVAQDLERDYYMT 181
Query: 192 ASEACDWGVVDKVL 205
EA +G++D +L
Sbjct: 182 PEEAKAYGLIDDIL 195
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 119/187 (63%), Positives = 151/187 (80%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
VEQT++GERSYDIYSRLLKERI+F+TGQ+EDHMA LI AQ+LFLEAE+P+K+I LYINSP
Sbjct: 2 VEQTSKGERSYDIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSP 61
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GGVVTAG+AIYDTM FIKP ++T C GQA SMG+ LLS G KG RFALPNAR+++HQP G
Sbjct: 62 GGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLG 121
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G GQA+DI+ AQ+I+K+K L ++ G+ +E+V +RD+ MSA EA ++G++D
Sbjct: 122 GARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLID 181
Query: 203 KVLMSRI 209
KVL R
Sbjct: 182 KVLTHRD 188
>gi|321468091|gb|EFX79078.1| hypothetical protein DAPPUDRAFT_231060 [Daphnia pulex]
Length = 235
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 153/194 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+V+EQT RGER+YDIYSRLLKERI+ V G I D +++L+ AQLLFL++E+ +K +
Sbjct: 26 PLVPIVIEQTGRGERAYDIYSRLLKERIICVMGPITDDLSSLVVAQLLFLQSESNKKPVH 85
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+ IYDTMQ++ PPI+T+C+GQA SM SLLL++G GMR++LPN+RI+
Sbjct: 86 MYINSPGGSVTAGLGIYDTMQYVLPPIATWCVGQACSMASLLLASGSPGMRYSLPNSRIM 145
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI+ A++I+K+K+++N++Y K+ G +E ++RD MS EA
Sbjct: 146 IHQPSGGVQGQATDIQIQAEEIMKLKKQINQLYGKHTGLQLSVIESNMERDKFMSPVEAK 205
Query: 197 DWGVVDKVLMSRID 210
++G++DK+L
Sbjct: 206 EFGLIDKILEHPPK 219
>gi|315185394|gb|EFU19166.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
thermophila DSM 6578]
Length = 206
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 150/194 (77%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP+V+EQT GERSYDIYSRLLK+RIVF+ G+I D A L+ AQLLFLE+++P
Sbjct: 2 NERMSHLVPIVIEQTGMGERSYDIYSRLLKDRIVFIDGEINDLTADLVVAQLLFLESQDP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+IS+YIN+PGG VTAG+AIYDTMQ++KP + T C+GQAASMG+LLL+AG G R ALP
Sbjct: 62 EKDISVYINTPGGSVTAGLAIYDTMQYVKPDVQTICLGQAASMGALLLTAGTPGKRLALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RIL+HQP GG GQA+DI A+++V+IK+ L + + G+ EEV + L+RD+ M+
Sbjct: 122 SSRILIHQPWGGVQGQATDISIQAREMVRIKKLLIHYFAHHTGRPEEEVAQDLERDYYMT 181
Query: 192 ASEACDWGVVDKVL 205
EA +G++D +L
Sbjct: 182 PEEAKAYGLIDDIL 195
>gi|150018814|ref|YP_001311068.1| endopeptidase Clp [Clostridium beijerinckii NCIMB 8052]
gi|149905279|gb|ABR36112.1| Endopeptidase Clp [Clostridium beijerinckii NCIMB 8052]
Length = 192
Score = 222 bits (567), Expect = 2e-56, Method: Composition-based stats.
Identities = 112/192 (58%), Positives = 149/192 (77%), Gaps = 2/192 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VPMV+EQT+RGERSYDIYSRLLKERI+ ++ Q+ D A++I +QLLFLE+ENP +I
Sbjct: 1 MSYVPMVIEQTSRGERSYDIYSRLLKERIIMLSDQVSDSTASIITSQLLFLESENPDGDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG +TAGMAIYDTMQ+IKP +ST C+G AASMGS LL+AG G R+ALPN+ I
Sbjct: 61 HFYINSPGGSITAGMAIYDTMQYIKPDVSTICLGLAASMGSFLLAAGAPGKRYALPNSEI 120
Query: 136 LLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
L+HQPS F GQA+DI H + ++K K ++N+IY + K EE+E+ ++RD+ MSA
Sbjct: 121 LIHQPSVHGGFQGQATDIRIHTEWLLKTKNKINKIYSEKTKKPIEEIERDMERDYFMSAK 180
Query: 194 EACDWGVVDKVL 205
EA +G++DK+L
Sbjct: 181 EALSYGIIDKIL 192
>gi|195473623|ref|XP_002089092.1| GE18928 [Drosophila yakuba]
gi|194175193|gb|EDW88804.1| GE18928 [Drosophila yakuba]
Length = 253
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 120/204 (58%), Positives = 158/204 (77%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL+
Sbjct: 19 SRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQ 78
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR
Sbjct: 79 SENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMR 138
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+ ++RD
Sbjct: 139 YSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERD 198
Query: 188 HIMSASEACDWGVVDKVLMSRIDI 211
H M+ EA G++D VL +
Sbjct: 199 HFMTPEEAKVLGIIDHVLEHPPET 222
>gi|78184632|ref|YP_377067.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013818|sp|Q3AY04|CLPP1_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78168926|gb|ABB26023.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 197
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG SGQASDI A +I+ +K RLN G+ + +++ DRD MS EA
Sbjct: 121 HQPLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVS 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|294499827|ref|YP_003563527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
gi|294349764|gb|ADE70093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium QM B1551]
Length = 193
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 150/192 (78%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L P VVEQT++GER+YDIYSRLL +R++ +TG++ D +AT I AQLLFL+AENP+K+I
Sbjct: 1 MNLTPYVVEQTSKGERAYDIYSRLLLDRVIMLTGEVTDEVATSIIAQLLFLDAENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +TAGMAI+DTMQ I+ +ST C+G AASMGS LL+ G+KG RFALPN+ +
Sbjct: 61 SIYINSPGGSITAGMAIFDTMQLIRADVSTLCIGLAASMGSFLLAGGQKGKRFALPNSEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+++K LNE+ + G++ ++K DRD +A EA
Sbjct: 121 MIHQPLGGAKGQAAEIEIRAKRILRLKDHLNELLSERTGQSLSTIKKDTDRDTFFTADEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D++L+
Sbjct: 181 KEYGMIDQILVH 192
>gi|268680774|ref|YP_003305205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
gi|268618805|gb|ACZ13170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurospirillum deleyianum DSM 6946]
Length = 196
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 155/193 (80%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VP+VVE+T RGERSYDIYSRLLK+RI+ ++G+I D +A+ I AQLLFLEAE+P+K+
Sbjct: 1 MSYYVPVVVEKTGRGERSYDIYSRLLKDRIIMLSGEINDVVASSIVAQLLFLEAEDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGGV+T+G +IYDTM +IKP IST C+GQAASMG+ LLSAG KG R+ALPNAR
Sbjct: 61 IYLYINSPGGVITSGFSIYDTMNYIKPDISTICIGQAASMGAFLLSAGTKGKRYALPNAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A++I+++K+ LNEI KNC + ++ K +RD MSA E
Sbjct: 121 IMIHQPLGGAQGQATDIEIQAKEILRMKQVLNEILAKNCNQKLPKIIKDTERDFFMSAEE 180
Query: 195 ACDWGVVDKVLMS 207
+C++G++DKVL
Sbjct: 181 SCEYGLIDKVLNK 193
>gi|199597270|ref|ZP_03210701.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus HN001]
gi|229551778|ref|ZP_04440503.1| endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|258507926|ref|YP_003170677.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus GG]
gi|258539175|ref|YP_003173674.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus Lc 705]
gi|199591786|gb|EDY99861.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus HN001]
gi|229314832|gb|EEN80805.1| endopeptidase Clp [Lactobacillus rhamnosus LMS2-1]
gi|257147853|emb|CAR86826.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus GG]
gi|257150851|emb|CAR89823.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus Lc 705]
gi|259649253|dbj|BAI41415.1| Clp protease proteolytic subunit [Lactobacillus rhamnosus GG]
gi|328465358|gb|EGF36608.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
rhamnosus MTCC 5462]
Length = 196
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 105/192 (54%), Positives = 151/192 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQT+RGER+YDIYSRLLK+RI+ ++G++ D MA + AQLLFL+A++ +K+I L
Sbjct: 2 LVPTVVEQTSRGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+A+ DTM FIK + T +G AASM S+LL+ G KG RFALPN+ IL+
Sbjct: 62 YINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQ ++IE A++I+K ++++N+I G+T E+++K +RDH MSA EA D
Sbjct: 122 HQPSGGAQGQQTEIEIAAEEILKTRKKMNQILADATGQTVEQIKKDTERDHYMSAQEAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D +L+++
Sbjct: 182 YGLIDDILVNKN 193
>gi|90962143|ref|YP_536059.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius UCC118]
gi|227891166|ref|ZP_04008971.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius ATCC 11741]
gi|301301246|ref|ZP_07207401.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|116243146|sp|Q1WTA8|CLPP_LACS1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90821337|gb|ABD99976.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius UCC118]
gi|227867040|gb|EEJ74461.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius ATCC 11741]
gi|300214827|gb|ADJ79243.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Lactobacillus salivarius CECT 5713]
gi|300851122|gb|EFK78851.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 197
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 97/197 (49%), Positives = 147/197 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQ+++GER+YDIYSRLLK+RI+ V+G++ D MA I AQLLFL+A++ +K+I
Sbjct: 1 MNLVPTVIEQSSQGERAYDIYSRLLKDRIIMVSGEVNDDMANAIIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYDTM F+ + T MG AASM S+L +AG KG RFALPN+ I
Sbjct: 61 YMYINSPGGSVSAGLAIYDTMNFVNADVQTIVMGMAASMASVLATAGTKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQ+++I+ A+ I+K ++ +N+I G+ E + K +RD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQSTEIQIAAEHILKTRKLINQILADGSGQDIETINKDTERDNFMTAQQA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D ++ ++ I+
Sbjct: 181 VDYGLIDGIMKNKKKIK 197
>gi|88608072|ref|YP_506627.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neorickettsia
sennetsu str. Miyayama]
gi|88600241|gb|ABD45709.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Neorickettsia
sennetsu str. Miyayama]
Length = 211
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 119/211 (56%), Positives = 163/211 (77%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ LVPMVV+QT RGER+YDI+SRLLKER+VF+TG IED MA+LI AQLLF
Sbjct: 1 MEMDTLVREKMNLVPMVVDQTPRGERAYDIFSRLLKERVVFLTGPIEDGMASLIVAQLLF 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LEAENP K+I +YINSPGGVVTAG++IYDTMQ+IKP +ST C+GQAAS SL+L++G +G
Sbjct: 61 LEAENPDKDIFMYINSPGGVVTAGLSIYDTMQYIKPSVSTVCVGQAASAASLILASGAEG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RFALP++R+++HQPSGG GQA+D+E H ++I+++KR +NEIY K+ G+T +++E L+
Sbjct: 121 KRFALPHSRVMVHQPSGGVRGQATDMEIHVKEILQLKRMINEIYQKHTGETIKKIETLLE 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
RD +S EA G++D ++ R + K +
Sbjct: 181 RDTFLSPEEAKKVGIIDDIITQRKENSGKQE 211
>gi|195339773|ref|XP_002036491.1| GM18225 [Drosophila sechellia]
gi|116811667|emb|CAL26000.1| CG5045 [Drosophila simulans]
gi|194130371|gb|EDW52414.1| GM18225 [Drosophila sechellia]
Length = 253
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 122/211 (57%), Positives = 161/211 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+S C + + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ +
Sbjct: 12 ISSAQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVV 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+
Sbjct: 72 AQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLA 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG GMR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+
Sbjct: 132 AGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEM 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++RDH M+ EA G++D VL +
Sbjct: 192 CGRMERDHFMTPEEAKVLGIIDHVLEHPPET 222
>gi|62185490|ref|YP_220275.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
abortus S26/3]
gi|81312362|sp|Q5L4W7|CLPP2_CHLAB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|62148557|emb|CAH64328.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
abortus S26/3]
gi|313848408|emb|CBY17412.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
psittaci RD1]
Length = 205
Score = 222 bits (566), Expect = 2e-56, Method: Composition-based stats.
Identities = 99/202 (49%), Positives = 150/202 (74%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ + LVP VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K
Sbjct: 1 MQMTLVPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I ++INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++
Sbjct: 61 DIKVFINSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHS 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
R+++HQPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A
Sbjct: 121 RMMIHQPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAE 180
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
+A +G++DKV+ S D ++K
Sbjct: 181 DAISYGLIDKVVSSAKDTKDKD 202
>gi|195578155|ref|XP_002078931.1| GD23683 [Drosophila simulans]
gi|194190940|gb|EDX04516.1| GD23683 [Drosophila simulans]
Length = 253
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 122/211 (57%), Positives = 161/211 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+S C + + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ +
Sbjct: 12 ISSAQCGGRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVV 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+
Sbjct: 72 AQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLA 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG GMR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+
Sbjct: 132 AGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEM 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++RDH M+ EA G++D VL +
Sbjct: 192 CGRMERDHFMTPEEAKVLGIIDHVLEHPPET 222
>gi|168335354|ref|ZP_02693449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Epulopiscium
sp. 'N.t. morphotype B']
Length = 193
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 109/192 (56%), Positives = 148/192 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +PMVVEQTNRGERSYDIYSRLLK+RI+ + ++ ++L AQLLFLEAE+P K+I
Sbjct: 1 MPSIPMVVEQTNRGERSYDIYSRLLKDRIILLCDEVNHVTSSLTVAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG + GMAIYDTMQ+IKP +ST CMG AASMG+ LL+ G+KG R ALPNA I
Sbjct: 61 MLYINSPGGSIVDGMAIYDTMQYIKPDVSTICMGMAASMGAFLLAGGQKGKRLALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI+ HA+ I++ K ++N+I N G+T E+V +RD+ M+A+EA
Sbjct: 121 MIHQPLGGTRGQATDIQIHAEHIIRTKAKMNQILSANTGQTLEKVALDTERDYYMTAAEA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+V+
Sbjct: 181 KEYGIIDRVIEK 192
>gi|319788749|ref|YP_004090064.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
albus 7]
gi|315450616|gb|ADU24178.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
albus 7]
Length = 196
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 101/196 (51%), Positives = 151/196 (77%), Gaps = 3/196 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP VVEQT+RGERS+DI+SRLL +RI+ + I+DH+A+L+ +QLL+LE+++P+K+I
Sbjct: 1 MALVPYVVEQTSRGERSFDIFSRLLNDRIIMLCEAIDDHVASLVISQLLYLESQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMAIYDT+Q+I+ ++T C+G AASMG+ LLS+G KG RF+LPN+ I
Sbjct: 61 DLYINSPGGSVTAGMAIYDTIQYIRCDVNTICIGMAASMGAFLLSSGTKGKRFSLPNSEI 120
Query: 136 LLHQPSG---GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP G SGQ +D++ H+ +V + +LN I +N GK+ E++ +RD+ ++A
Sbjct: 121 MIHQPLIGGGGISGQCTDVKIHSDHLVATREKLNRILAENSGKSIEQIAIDTERDNYLTA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++DKV+ R
Sbjct: 181 QEAMEYGLIDKVITKR 196
>gi|229145364|ref|ZP_04273753.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228638203|gb|EEK94644.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
Length = 198
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 140/197 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E+ + +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+
Sbjct: 2 EEFKMNTIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDA 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+I LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALP
Sbjct: 62 EKDIYLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ I++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+
Sbjct: 122 NSEIMIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMT 181
Query: 192 ASEACDWGVVDKVLMSR 208
A EA +G+VD V+ +
Sbjct: 182 AEEAKVYGIVDDVVTKK 198
>gi|260102504|ref|ZP_05752741.1| ATP-dependent Clp protease [Lactobacillus helveticus DSM 20075]
gi|112148370|gb|ABI13539.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus CNRZ32]
gi|260083687|gb|EEW67807.1| ATP-dependent Clp protease [Lactobacillus helveticus DSM 20075]
gi|328461831|gb|EGF34057.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus MTCC 5463]
Length = 194
Score = 222 bits (566), Expect = 3e-56, Method: Composition-based stats.
Identities = 101/193 (52%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S++L++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASIILTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++NEI + G+ E+++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G++D+++ ++
Sbjct: 182 YGLIDEIMANKKK 194
>gi|161507214|ref|YP_001577168.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus DPC 4571]
gi|172048207|sp|A8YUD9|CLPP_LACH4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160348203|gb|ABX26877.1| ATP-dependent Clp protease P [Lactobacillus helveticus DPC 4571]
Length = 194
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++NEI + G+ E+++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G++D+++ ++
Sbjct: 182 YGLIDEIMANKKK 194
>gi|107101233|ref|ZP_01365151.1| hypothetical protein PaerPA_01002266 [Pseudomonas aeruginosa PACS2]
Length = 192
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 118/189 (62%), Positives = 151/189 (79%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQ+ RGER+YDIYSRLLKERI+F+ GQ+ED+MA L+ AQLLFLEAENP+K+I LYIN
Sbjct: 1 MVVEQSARGERAYDIYSRLLKERIIFLVGQVEDYMANLVVAQLLFLEAENPEKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R+++HQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPNVSTTCIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDIE HA++I+ IK RLN+I + G+ + + + DRD MS EA +G+
Sbjct: 121 LGGFQGQASDIEIHAKEILFIKERLNQILAHHTGQPLDVIARDTDRDRFMSGDEAVKYGL 180
Query: 201 VDKVLMSRI 209
+DKV+ R
Sbjct: 181 IDKVMTQRD 189
>gi|116811647|emb|CAL25990.1| CG5045 [Drosophila melanogaster]
Length = 253
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 120/203 (59%), Positives = 158/203 (77%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++
Sbjct: 20 RANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQS 79
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR+
Sbjct: 80 ENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRY 139
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+ ++RDH
Sbjct: 140 SLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDH 199
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
M+ EA G++D VL +
Sbjct: 200 FMTPEEAKVLGIIDHVLEHPPET 222
>gi|289804604|ref|ZP_06535233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. AG3]
Length = 228
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 123/194 (63%), Positives = 163/194 (84%), Gaps = 2/194 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 37 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 94
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 95 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 154
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G++ E++
Sbjct: 155 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTGQSLEQI 214
Query: 181 EKTLDRDHIMSASE 194
E+ +RD +SA E
Sbjct: 215 ERDTERDRFLSAPE 228
>gi|116811645|emb|CAL25989.1| CG5045 [Drosophila melanogaster]
gi|116811649|emb|CAL25991.1| CG5045 [Drosophila melanogaster]
gi|116811651|emb|CAL25992.1| CG5045 [Drosophila melanogaster]
gi|116811653|emb|CAL25993.1| CG5045 [Drosophila melanogaster]
gi|116811655|emb|CAL25994.1| CG5045 [Drosophila melanogaster]
gi|116811657|emb|CAL25995.1| CG5045 [Drosophila melanogaster]
gi|116811659|emb|CAL25996.1| CG5045 [Drosophila melanogaster]
gi|116811661|emb|CAL25997.1| CG5045 [Drosophila melanogaster]
gi|116811663|emb|CAL25998.1| CG5045 [Drosophila melanogaster]
gi|116811665|emb|CAL25999.1| CG5045 [Drosophila melanogaster]
gi|223966785|emb|CAR93129.1| CG5045-PA [Drosophila melanogaster]
gi|223966787|emb|CAR93130.1| CG5045-PA [Drosophila melanogaster]
gi|223966789|emb|CAR93131.1| CG5045-PA [Drosophila melanogaster]
gi|223966791|emb|CAR93132.1| CG5045-PA [Drosophila melanogaster]
gi|223966795|emb|CAR93134.1| CG5045-PA [Drosophila melanogaster]
gi|223966797|emb|CAR93135.1| CG5045-PA [Drosophila melanogaster]
gi|223966799|emb|CAR93136.1| CG5045-PA [Drosophila melanogaster]
gi|223966801|emb|CAR93137.1| CG5045-PA [Drosophila melanogaster]
gi|223966803|emb|CAR93138.1| CG5045-PA [Drosophila melanogaster]
Length = 253
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 120/203 (59%), Positives = 158/203 (77%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++
Sbjct: 20 RANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQS 79
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR+
Sbjct: 80 ENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRY 139
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+ ++RDH
Sbjct: 140 SLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRMERDH 199
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
M+ EA G++D VL +
Sbjct: 200 FMTPEEAKVLGIIDHVLEHPPET 222
>gi|51891496|ref|YP_074187.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
gi|67460470|sp|Q67SK0|CLPP1_SYMTH RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|51855185|dbj|BAD39343.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 202
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 107/197 (54%), Positives = 144/197 (73%), Gaps = 2/197 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+EQTNRGERSYDIYSRLLK+RIVF+ I+D +A ++ AQLLFLE+E+P K
Sbjct: 1 MSYLIPYVIEQTNRGERSYDIYSRLLKDRIVFLGTPIDDQVANVVIAQLLFLESEDPDKP 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
++LYINSPGG V+AG+ IYD MQ IK P++T +G AASM +LLL+AG G R+ALPNAR
Sbjct: 61 VNLYINSPGGSVSAGLGIYDAMQHIKSPVNTTVVGMAASMAALLLAAGT-GKRYALPNAR 119
Query: 135 ILLHQPS-GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++HQP G GQ +DIE A++ VK K+ + EI K+ G++ E + +RD MSA
Sbjct: 120 VMIHQPHLSGVGGQVTDIEITAREAVKTKQLMAEILAKHSGQSVERILADTERDRWMSAQ 179
Query: 194 EACDWGVVDKVLMSRID 210
EA ++G+VD+VL R
Sbjct: 180 EAVEYGLVDEVLHPREK 196
>gi|58262368|ref|XP_568594.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134118898|ref|XP_771952.1| hypothetical protein CNBN1320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50254556|gb|EAL17305.1| hypothetical protein CNBN1320 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230768|gb|AAW47077.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 260
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 118/208 (56%), Positives = 160/208 (76%), Gaps = 9/208 (4%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+VVEQT RGERSYDIYSRLLKER++F+ + +TL+ AQLLFLEAE+P++ I
Sbjct: 54 SLVPIVVEQTARGERSYDIYSRLLKERVIFLG-PVNSQDSTLLTAQLLFLEAEDPKRPIK 112
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVT+G+AIYDTMQ+I PP+ TFCMGQAASMGSLLL+ GEKG R+AL N+ ++
Sbjct: 113 LYINSPGGVVTSGLAIYDTMQYISPPVHTFCMGQAASMGSLLLAGGEKGHRYALKNSSVM 172
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT-------YEEVEKTLDRDHI 189
+HQPSGG GQASDI HA++I++I+ L +IY ++C + + EK L+RD+
Sbjct: 173 IHQPSGGAQGQASDIALHAKEILRIRAALTDIYAEHCTRPGEERSAALDRFEKALERDYF 232
Query: 190 MSASEACDWGVVDKVLMSR-IDIEEKSK 216
M++ EA ++G+VDK++ R ++ E+ K
Sbjct: 233 MTSEEAVEFGIVDKIVTQRGKEVSEEEK 260
>gi|227877204|ref|ZP_03995278.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus JV-V01]
gi|227893204|ref|ZP_04011009.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
ultunensis DSM 16047]
gi|256842758|ref|ZP_05548246.1| Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256848932|ref|ZP_05554366.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus MV-1A-US]
gi|262045725|ref|ZP_06018689.1| Clp protease [Lactobacillus crispatus MV-3A-US]
gi|293380203|ref|ZP_06626285.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus 214-1]
gi|295692558|ref|YP_003601168.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
crispatus ST1]
gi|312977722|ref|ZP_07789469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus CTV-05]
gi|227863258|gb|EEJ70703.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus JV-V01]
gi|227864973|gb|EEJ72394.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
ultunensis DSM 16047]
gi|256614178|gb|EEU19379.1| Clp protease [Lactobacillus crispatus 125-2-CHN]
gi|256714471|gb|EEU29458.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus MV-1A-US]
gi|260573684|gb|EEX30240.1| Clp protease [Lactobacillus crispatus MV-3A-US]
gi|290923247|gb|EFE00168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus 214-1]
gi|295030664|emb|CBL50143.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
crispatus ST1]
gi|310895461|gb|EFQ44528.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
crispatus CTV-05]
gi|323466927|gb|ADX70614.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
helveticus H10]
Length = 194
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 151/193 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++NEI + G+ E+++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G++D++++++
Sbjct: 182 YGLIDEIMVNKKK 194
>gi|160945107|ref|ZP_02092333.1| hypothetical protein FAEPRAM212_02626 [Faecalibacterium prausnitzii
M21/2]
gi|158442838|gb|EDP19843.1| hypothetical protein FAEPRAM212_02626 [Faecalibacterium prausnitzii
M21/2]
Length = 229
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 103/213 (48%), Positives = 154/213 (72%), Gaps = 5/213 (2%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++F K E F+ VP VVEQ+ GERSYDI+SRLL +RI+ ++ + D A+L+
Sbjct: 17 VNFANKLKPFQEANFMSFVPYVVEQSAHGERSYDIFSRLLNDRIIVLSEDVNDTTASLVV 76
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL+LE ++P K+ISLYINSPGG ++AGMAI+DTMQ+IK +ST CMG AASMG+ LL+
Sbjct: 77 AQLLYLEGQDPDKDISLYINSPGGSISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLA 136
Query: 121 AGEKGMRFALPNARILLHQP-----SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
+G KG RFALPNA I++HQP GG SGQ +DI+ HA+ +V I+ ++N + + G+
Sbjct: 137 SGTKGKRFALPNAEIMIHQPLIGGQGGGLSGQTTDIKIHAEHMVYIRDKMNRMLSEYTGQ 196
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
E++++ +RD+ ++A +A ++G++D+V+ R
Sbjct: 197 PLEKIQQDTERDNYLTAQQAKEYGLIDEVIAHR 229
>gi|229185008|ref|ZP_04312198.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|228598483|gb|EEK56113.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
Length = 193
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 137/193 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + + E V +RD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTEQPIERVAHDTERDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ +
Sbjct: 181 KAYGIVDDVVTKK 193
>gi|195434156|ref|XP_002065069.1| GK15263 [Drosophila willistoni]
gi|194161154|gb|EDW76055.1| GK15263 [Drosophila willistoni]
Length = 255
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 121/210 (57%), Positives = 162/210 (77%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
CA + + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLF
Sbjct: 17 CASRANSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG G
Sbjct: 77 LQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPG 136
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
MR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ +Y+E+ + ++
Sbjct: 137 MRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTAIYVKHAKNSYDEMCQRME 196
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
RDH M+ EA G++D VL + S
Sbjct: 197 RDHFMTPEEAKTLGIIDHVLEHPPETVSDS 226
>gi|198461900|ref|XP_001352265.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
gi|198142480|gb|EAL29303.2| GA18618 [Drosophila pseudoobscura pseudoobscura]
Length = 253
Score = 222 bits (565), Expect = 3e-56, Method: Composition-based stats.
Identities = 120/199 (60%), Positives = 157/199 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++EN K I
Sbjct: 28 NLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIH 87
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR++LPNARI+
Sbjct: 88 LYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIM 147
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI HA++I+KIKR+L IYVK+ +YEE+ + ++RDH M+ EA
Sbjct: 148 IHQPSGGAQGQATDILIHAEEIIKIKRQLTSIYVKHAKNSYEEMCQRMERDHFMTPDEAK 207
Query: 197 DWGVVDKVLMSRIDIEEKS 215
G++D VL + S
Sbjct: 208 VLGIIDHVLEHPPETVSDS 226
>gi|58337015|ref|YP_193600.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus NCFM]
gi|227903577|ref|ZP_04021382.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus ATCC 4796]
gi|67460152|sp|Q5FL55|CLPP_LACAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58254332|gb|AAV42569.1| ATP-dependent Clp protease P [Lactobacillus acidophilus NCFM]
gi|227868464|gb|EEJ75885.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus ATCC 4796]
Length = 195
Score = 222 bits (565), Expect = 4e-56, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 151/192 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++NEI + G+ E+++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLEKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRI 209
+G++D++++++
Sbjct: 182 YGLIDEIMVNKK 193
>gi|116494470|ref|YP_806204.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
ATCC 334]
gi|191637855|ref|YP_001987021.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
BL23]
gi|227535562|ref|ZP_03965611.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239631219|ref|ZP_04674250.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|301065981|ref|YP_003788004.1| protease subunit of ATP-dependent Clp protease [Lactobacillus casei
str. Zhang]
gi|122264104|sp|Q03AL0|CLPP_LACC3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706456|sp|B3WCR2|CLPP_LACCB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116104620|gb|ABJ69762.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
casei ATCC 334]
gi|190712157|emb|CAQ66163.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Lactobacillus casei BL23]
gi|227186809|gb|EEI66876.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|239525684|gb|EEQ64685.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|300438388|gb|ADK18154.1| Protease subunit of ATP-dependent Clp protease [Lactobacillus casei
str. Zhang]
gi|327381924|gb|AEA53400.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
LC2W]
gi|327385084|gb|AEA56558.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus casei
BD-II]
Length = 196
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 106/192 (55%), Positives = 151/192 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQT+RGER+YDIYSRLLK+RI+ ++G++ D MA + AQLLFL+A++ +K+I L
Sbjct: 2 LVPTVVEQTSRGERAYDIYSRLLKDRIIMLSGEVNDQMANSVIAQLLFLDAQDSEKDIYL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+A+ DTM FIK + T +G AASM S+LL+ G KG RFALPN+ IL+
Sbjct: 62 YINSPGGVITSGLAMLDTMNFIKSDVQTIAIGMAASMASVLLAGGTKGKRFALPNSTILI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQ ++IE A++I+K +R++N+I G+T E+++K +RDH MSA EA D
Sbjct: 122 HQPSGGAQGQQTEIEIAAEEILKTRRKMNQILADATGQTIEQIKKDTERDHYMSAQEAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D +L+++
Sbjct: 182 YGLIDDILVNKN 193
>gi|239624537|ref|ZP_04667568.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239520923|gb|EEQ60789.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 196
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 103/196 (52%), Positives = 143/196 (72%), Gaps = 3/196 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQT+RGERSYDI+SRLL +RI+F+ ++ D A+LI AQ+LFLEA++ +K+I
Sbjct: 1 MSTIPYVIEQTSRGERSYDIFSRLLSDRIIFLGEEVSDVSASLITAQMLFLEAQDLEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDTMQFI+ +ST C+G AAS G+ LL+ G KG R ALPNA I
Sbjct: 61 QLYINSPGGSVTAGFAIYDTMQFIRCDVSTICIGLAASFGAFLLAGGTKGKRLALPNAEI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP+ GQASDI+ + ++K ++RLN I N GK+ +V +RD+ MSA
Sbjct: 121 MIHQPAIHGSGIQGQASDIKIVSDHMLKSRQRLNRILADNTGKSIAQVAADTERDYYMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++DK++ R
Sbjct: 181 GEAVEYGLIDKIIDRR 196
>gi|194859835|ref|XP_001969460.1| GG10114 [Drosophila erecta]
gi|190661327|gb|EDV58519.1| GG10114 [Drosophila erecta]
Length = 253
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 121/206 (58%), Positives = 159/206 (77%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
C + + + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLF
Sbjct: 17 CVSRANSVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLF 76
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG G
Sbjct: 77 LQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPG 136
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
MR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ TYEE+ ++
Sbjct: 137 MRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNTYEEMCGRME 196
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RDH M+ EA G++D VL +
Sbjct: 197 RDHFMTPEEAKVLGIIDHVLEHPPET 222
>gi|255994401|ref|ZP_05427536.1| Clp protease [Eubacterium saphenum ATCC 49989]
gi|255993114|gb|EEU03203.1| Clp protease [Eubacterium saphenum ATCC 49989]
Length = 196
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 148/195 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L P+V+E+ GERS+DIYSRLL++RI+F+ IE +MA+ I AQLLFLEAE+ K+I
Sbjct: 1 MALTPIVIEKDGSGERSFDIYSRLLRDRIIFIGEPIESNMASSIIAQLLFLEAEDSSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VT+G+AIYDTMQFIKP + T C+G AASM ++LL AGEKG RFALPN+ I
Sbjct: 61 CIYINSPGGDVTSGLAIYDTMQFIKPQVQTVCVGMAASMAAVLLLAGEKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG SGQAS+I+ A+ I+K + +LN + K+ K +E+ DRD M+A+EA
Sbjct: 121 MIHQPMGGASGQASEIKIAAEHIIKTRDKLNRLISKHTTKNLSTIEEDTDRDKYMTANEA 180
Query: 196 CDWGVVDKVLMSRID 210
D+G++D VL SR +
Sbjct: 181 LDYGIIDSVLKSRDE 195
>gi|46447010|ref|YP_008375.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
gi|67460480|sp|Q6MBE9|CLPP2_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|46400651|emb|CAF24100.1| probable ATP-dependent Clp protease proteolytic subunit P
[Candidatus Protochlamydia amoebophila UWE25]
Length = 207
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 99/196 (50%), Positives = 148/196 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L P V+E T RGERS DIYSRLLK+RI+F+ +I D +A ++ AQLLFL+ E+P+K++
Sbjct: 11 MSLTPYVIEDTGRGERSMDIYSRLLKDRIIFIGTEITDQVANVVVAQLLFLKMEDPKKDV 70
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINS GG +T+G+AIYDTMQ++ I+T+C+GQAASMG+LLL+AG KG RFALPN+RI
Sbjct: 71 HIYINSLGGYITSGLAIYDTMQYLGCDINTYCIGQAASMGALLLTAGTKGKRFALPNSRI 130
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG G ++D+ A++I+++K+RLN I + + E++ +RD MSA EA
Sbjct: 131 MIHQPYGGVGGTSADVALQAKEILELKKRLNHIMADSTRQPLEKIAADSERDFYMSAVEA 190
Query: 196 CDWGVVDKVLMSRIDI 211
D+G++D+V++ +
Sbjct: 191 KDYGLIDEVVVPKKKT 206
>gi|86357052|ref|YP_468944.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CFN
42]
gi|116243105|sp|Q2KAB9|CLPP1_RHIEC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86281154|gb|ABC90217.1| endopeptidase Clp, subunit 1 protein [Rhizobium etli CFN 42]
Length = 202
Score = 221 bits (564), Expect = 4e-56, Method: Composition-based stats.
Identities = 116/202 (57%), Positives = 160/202 (79%), Gaps = 1/202 (0%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMV+EQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEA +P
Sbjct: 1 MREAMQLVPMVIEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEA-DP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K I+LYINSPGG VT+G+A+YDTM+FI+ P+ T CMG A SMGS LL AGE G R ALP
Sbjct: 60 EKPINLYINSPGGAVTSGLAMYDTMRFIRAPVHTLCMGTARSMGSFLLMAGEPGERAALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
NA IL+HQPSGGF GQASD+ HA++I+K K+R+ +Y ++CG++YE+ E+ +DRD M+
Sbjct: 120 NASILIHQPSGGFQGQASDMLIHAEEILKTKQRMTRLYAEHCGRSYEDFERGMDRDRFMT 179
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A EA +WG+++++L R D
Sbjct: 180 AEEALEWGLIERILKVREDTSS 201
>gi|317455555|pdb|3Q7H|A Chain A, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455556|pdb|3Q7H|B Chain B, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455557|pdb|3Q7H|C Chain C, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455558|pdb|3Q7H|D Chain D, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455559|pdb|3Q7H|E Chain E, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455560|pdb|3Q7H|F Chain F, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455561|pdb|3Q7H|G Chain G, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455562|pdb|3Q7H|H Chain H, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455563|pdb|3Q7H|I Chain I, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455564|pdb|3Q7H|J Chain J, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455565|pdb|3Q7H|K Chain K, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455566|pdb|3Q7H|L Chain L, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455567|pdb|3Q7H|M Chain M, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
gi|317455568|pdb|3Q7H|N Chain N, Structure Of The Clpp Subunit Of The Atp-Dependent Clp
Protease From Coxiella Burnetii
Length = 195
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 142/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP VVEQT+RGER+YDIYSRLLK+R++F+ GQ+EDH A L AQ LFLE+ENP K+I+L
Sbjct: 4 LVPXVVEQTSRGERAYDIYSRLLKDRVIFLVGQVEDHXANLAIAQXLFLESENPNKDINL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VT+ AIYDT QF+KP + T C+GQAAS G+LLL+ G KG R LP++ + +
Sbjct: 64 YINSPGGAVTSAXAIYDTXQFVKPDVRTLCIGQAASAGALLLAGGAKGKRHCLPHSSVXI 123
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQ GG+ GQ +DI+ HA+ ++ +LN+I K+ GK E VEK +RD+ ++ EA +
Sbjct: 124 HQVLGGYQGQGTDIQIHAKQTQRVSDQLNQILAKHTGKDIERVEKDTNRDYFLTPEEAVE 183
Query: 198 WGVVDKVLMSRI 209
+G++D + R
Sbjct: 184 YGLIDSIFKERP 195
>gi|32490904|ref|NP_871158.1| hypothetical protein WGLp155 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340011|sp|Q8D346|CLPP_WIGBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25166110|dbj|BAC24301.1| clpP [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 194
Score = 221 bits (564), Expect = 5e-56, Method: Composition-based stats.
Identities = 115/194 (59%), Positives = 156/194 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P VVE+ RGERSYDI+SRLLKERI+FVTG+IED+MA LI AQ++FLE+E+P+K+I
Sbjct: 1 MNLIPTVVEKNARGERSYDIFSRLLKERIIFVTGKIEDYMANLIIAQMIFLESEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVT+GM+IYDTMQFIK +ST C+GQ++SM +L+L++GEKG RF+LPNARI
Sbjct: 61 FLYINSPGGVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+DI H +I+KIK+ + E+ K+ G++ E + K +RD S SEA
Sbjct: 121 MIHQPLGGSQGQATDIAIHTTEILKIKKCMIELLSKHTGQSAEIISKDTERDRFFSGSEA 180
Query: 196 CDWGVVDKVLMSRI 209
+G++DKV+ R
Sbjct: 181 VIYGLIDKVITCRK 194
>gi|262037349|ref|ZP_06010814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
gi|261748606|gb|EEY35980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
Length = 189
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 108/186 (58%), Positives = 152/186 (81%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+E RGERSYDIYSRLLK+RI+F+ G++ED++A I AQLLFL+A++ +K+I +YI
Sbjct: 4 PVVIENDGRGERSYDIYSRLLKDRIIFLGGEVEDNIANSIIAQLLFLDAQDKEKDIVMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVVTAG+AIYDTM+ IK +ST C+GQAASMG++LL++G KG R++LPN+R+++HQ
Sbjct: 64 NSPGGVVTAGLAIYDTMRHIKADVSTVCIGQAASMGAVLLASGAKGKRYSLPNSRVMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
PSGG GQA+DI+ A++I KIK+ LNEI + GK EE+ + +RD+ MS+ EA +G
Sbjct: 124 PSGGARGQATDIQIQAKEIEKIKKTLNEILSEATGKPVEEIYRDTERDNFMSSEEALAYG 183
Query: 200 VVDKVL 205
++DK+L
Sbjct: 184 IIDKIL 189
>gi|325283535|ref|YP_004256076.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus
proteolyticus MRP]
gi|324315344|gb|ADY26459.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus
proteolyticus MRP]
Length = 198
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 98/195 (50%), Positives = 145/195 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT RGER+YDIYSRLLK+RI+FV +E MA I AQLL L+++NP++EI
Sbjct: 1 MSVIPYVIEQTGRGERTYDIYSRLLKDRIIFVGTPVESQMANSIVAQLLLLDSQNPEQEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YIN PGG V AG+AIYDTMQ+++ PIST C+G A SMGS+LL AG+KG R ALPN+RI
Sbjct: 61 QMYINCPGGEVYAGLAIYDTMQYVRAPISTICVGMAMSMGSVLLMAGDKGKRMALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ S GF G D+E A++++ ++ +L EIY K+ ++++ + ++RD+ MS EA
Sbjct: 121 MIHQGSAGFRGNTPDLEVQAKEVLSLRDKLVEIYHKHTDLPHDKLLRDMERDYFMSPEEA 180
Query: 196 CDWGVVDKVLMSRID 210
+G++D+V+ +
Sbjct: 181 QQYGLIDQVIERTRE 195
>gi|254512409|ref|ZP_05124476.1| Clp protease [Rhodobacteraceae bacterium KLH11]
gi|221536120|gb|EEE39108.1| Clp protease [Rhodobacteraceae bacterium KLH11]
Length = 196
Score = 221 bits (563), Expect = 5e-56, Method: Composition-based stats.
Identities = 124/195 (63%), Positives = 159/195 (81%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT+RGER+YDI+SRLLKERI+F+ G I D M+ L+ AQLL LEAENP KEIS+YIN
Sbjct: 1 MVVEQTSRGERAYDIFSRLLKERIIFINGPIHDGMSHLVVAQLLHLEAENPNKEISIYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVT+G++IYDTMQ+IKP ST +GQAASMGS+LL+ GEKGMRF+LPN+RI++HQP
Sbjct: 61 SPGGVVTSGLSIYDTMQYIKPKCSTLVIGQAASMGSVLLAGGEKGMRFSLPNSRIMVHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG+ GQASDI HA + K+K RL +IYV++ G+T + VEK LDRD+ MS EA DWG
Sbjct: 121 SGGYQGQASDIMIHAAETQKLKDRLYDIYVRHTGQTKKAVEKALDRDNFMSPEEAKDWGH 180
Query: 201 VDKVLMSRIDIEEKS 215
+D+++ +R ++
Sbjct: 181 IDEIVENRAKMDGDE 195
>gi|27904898|ref|NP_778024.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
gi|31076632|sp|Q89AA1|CLPP_BUCBP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27904296|gb|AAO27129.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Bp (Baizongia pistaciae)]
Length = 205
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 112/204 (54%), Positives = 160/204 (78%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ L+PMV+E+T+ GERSYDIYSRLLKERI+F+TG I+D+ A LI AQ+LF
Sbjct: 2 TLYDKEINKNSLLIPMVIEKTSYGERSYDIYSRLLKERIIFLTGTIDDNTANLIVAQMLF 61
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LEAEN +++I +YINSPGGV+TAGM+IYDTM+FIKP ++T C+GQA SM +L+L+AG+KG
Sbjct: 62 LEAENAKQDIYIYINSPGGVITAGMSIYDTMKFIKPNVNTICIGQACSMAALILTAGKKG 121
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ LPN+RI++HQP GG++GQASDIE HA++I+K+KR+LNE+ + ++ +EK +
Sbjct: 122 YRYCLPNSRIMIHQPIGGYNGQASDIEIHAKEIIKVKRKLNELMAFHTSQSINTIEKDTE 181
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD +SA++A +G++D +L R
Sbjct: 182 RDCFLSANQAIKYGLIDTILSYRT 205
>gi|268611241|ref|ZP_06144968.1| ATP-dependent Clp protease, protease subunit [Ruminococcus
flavefaciens FD-1]
Length = 196
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 105/196 (53%), Positives = 143/196 (72%), Gaps = 2/196 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP VVEQT+RGERSYDI+SRLL +RI+ ++ Q+ D A+L+ AQLL+LE+++P+K+
Sbjct: 1 MSSLVPYVVEQTSRGERSYDIFSRLLNDRIIMLSDQVNDTTASLVVAQLLYLESQDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
ISLYINSPGG VTAG AIYDTM +IK +ST C+G AASMG+ LLS+G KG R ALPN+
Sbjct: 61 ISLYINSPGGSVTAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLSSGAKGKRIALPNSE 120
Query: 135 ILLHQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
I++HQP G DI HA+++ + + RL I +N GK+ EE+ +RD+ M+A
Sbjct: 121 IMIHQPLIGGGLGGQQTDIMIHAKNMERTRNRLESILAENTGKSVEEIHAACERDNYMTA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA D+G++DKV+ R
Sbjct: 181 QEAMDYGLIDKVIEKR 196
>gi|92114168|ref|YP_574096.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chromohalobacter salexigens DSM 3043]
gi|116243130|sp|Q1QVW1|CLPP_CHRSD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91797258|gb|ABE59397.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chromohalobacter salexigens DSM 3043]
Length = 206
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 115/193 (59%), Positives = 156/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMVVEQ RGER+YDIYSRLLKER++F+ G +ED+MA L+ AQ+LFLE+ENP K+I
Sbjct: 12 GLVPMVVEQNARGERAYDIYSRLLKERVIFLIGPVEDYMANLVVAQMLFLESENPDKDIH 71
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+ G G R+ LP++R++
Sbjct: 72 LYINSPGGSVTAGMSIYDTMQFIKPDVSTVCVGQAASMGALLLAGGAAGKRYCLPHSRMM 131
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG+ GQA+DIE H ++I+ I+++LNEI K+ G+ E V + DRD+ M+ ++A
Sbjct: 132 IHQPLGGYQGQAADIEIHTKEILNIRQQLNEILAKHTGQDAETVARDTDRDNFMNGTQAV 191
Query: 197 DWGVVDKVLMSRI 209
++G++D +L R
Sbjct: 192 EYGLIDAMLDKRP 204
>gi|328955401|ref|YP_004372734.1| ATP-dependent Clp protease proteolytic subunit ClpP [Coriobacterium
glomerans PW2]
gi|328455725|gb|AEB06919.1| ATP-dependent Clp protease proteolytic subunit ClpP [Coriobacterium
glomerans PW2]
Length = 207
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 107/205 (52%), Positives = 143/205 (69%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP VVEQT RGERSYDIYSRLL +RIVF+ +I A L+ AQLL LE+++
Sbjct: 3 SKIASALVPYVVEQTPRGERSYDIYSRLLNDRIVFLGEEINSVTANLVIAQLLHLESQDA 62
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGG V +G+AI DTM FIK +ST C+G AASM +LLL+ G G RF LP
Sbjct: 63 EKDISLYINSPGGEVYSGLAILDTMNFIKSDVSTICVGMAASMAALLLANGASGKRFCLP 122
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+ +++HQPSGG GQ ++IE A +I + ++ LN I G+ E+VE +RDH M
Sbjct: 123 NSMMMIHQPSGGAQGQQTEIEIAAAEIKRNRQNLNRILADATGQPIEKVEIDTERDHYMR 182
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A EA +G+VD+++ SR + E+ SK
Sbjct: 183 AEEAQSYGLVDRIISSRSETEKSSK 207
>gi|315037919|ref|YP_004031487.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL 1112]
gi|325956392|ref|YP_004291804.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus 30SC]
gi|312276052|gb|ADQ58692.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL 1112]
gi|325332957|gb|ADZ06865.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
acidophilus 30SC]
gi|327183211|gb|AEA31658.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylovorus GRL 1118]
Length = 194
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 101/193 (52%), Positives = 151/193 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++NEI + G+ ++++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINEILHETTGQPLDKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G++D++++++
Sbjct: 182 YGLIDEIMVNKKK 194
>gi|72382132|ref|YP_291487.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|115311342|sp|Q46L44|CLPP1_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|72001982|gb|AAZ57784.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 196
Score = 221 bits (563), Expect = 6e-56, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEA++P K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ IK +LN+ G+ E + + DRD MS SEA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQPIERIREDTDRDFYMSPSEAIE 180
Query: 198 WGVVDKVLMSRI 209
+G++D V R
Sbjct: 181 YGIIDNVFNKRP 192
>gi|330722307|gb|EGH00174.1| ATP-dependent Clp protease proteolytic subunit [gamma
proteobacterium IMCC2047]
Length = 210
Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 114/198 (57%), Positives = 156/198 (78%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ D+ LVPMV+EQT RGERS+DIYSRLLKER++F+ G +EDHMA L+ AQ+LFLE+EN
Sbjct: 9 NHDLISQLVPMVIEQTARGERSFDIYSRLLKERVIFLVGPVEDHMANLVVAQMLFLESEN 68
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+I LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQAASMG+LLL+ G G RF L
Sbjct: 69 PDKDIHLYINSPGGSVTAGMSIYDTMQFIKPDVSTLCIGQAASMGALLLAGGAAGKRFCL 128
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++R+++HQP GGF GQA+DIE H ++I+ I+ +LN + K+ G+ +++ DRD+ M
Sbjct: 129 PHSRVMIHQPLGGFQGQATDIEIHTKEILTIRDKLNRVLSKHTGQDLDKIATDTDRDNFM 188
Query: 191 SASEACDWGVVDKVLMSR 208
A ++G++D+V+ +R
Sbjct: 189 DGHAAVEYGLIDQVMENR 206
>gi|309790148|ref|ZP_07684720.1| endopeptidase Clp [Oscillochloris trichoides DG6]
gi|308227733|gb|EFO81389.1| endopeptidase Clp [Oscillochloris trichoides DG6]
Length = 215
Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 142/201 (70%), Gaps = 1/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+PMV+E ++RGER++DIYSRLLKERI+ + IED +A LI AQLLFL++++P ++I
Sbjct: 15 SALIPMVIESSSRGERAFDIYSRLLKERIIILGTPIEDQIANLIVAQLLFLDSDDPDRDI 74
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAG+AIYDTM+ I+ ++T C+G A SM + +L+ G KG R++LP++ I
Sbjct: 75 WLYINSPGGSITAGLAIYDTMRHIRANVATVCVGMAGSMATPILAGGAKGKRYSLPHSTI 134
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+H GG G A D+E A+++++ ++ + E+ + G+T E + K DRD M+ +A
Sbjct: 135 HMHPAGGGARGYAPDVEIMARELLREQQLIRELLATDTGQTIERIAKDFDRDLFMTPIQA 194
Query: 196 CDWGVVDKVLMSRIDIEEKSK 216
++G++D++L R DI K
Sbjct: 195 KEYGIIDEILT-REDIAGGEK 214
>gi|319760381|ref|YP_004124319.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus
Blochmannia vafer str. BVAF]
gi|318039095|gb|ADV33645.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus
Blochmannia vafer str. BVAF]
Length = 215
Score = 221 bits (562), Expect = 6e-56, Method: Composition-based stats.
Identities = 115/206 (55%), Positives = 160/206 (77%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
+ G + + +G++P+V+EQT RGER+YDI+S LLKERI+F+T IE+H A I AQ
Sbjct: 8 YGGNTTLQNLNYNMGIIPIVIEQTARGERAYDIFSLLLKERIIFITDTIENHTANSIVAQ 67
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
++FLE+ENP K+I LYINSPGG++TAGM+IYDT+QFIKP +ST+CMGQAASMG+ LL+AG
Sbjct: 68 MMFLESENPTKDIHLYINSPGGLITAGMSIYDTIQFIKPDVSTYCMGQAASMGAFLLAAG 127
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG RF LPNAR+++HQP G F GQA+DI H ++I+++K +N++ K+ GK+ + V K
Sbjct: 128 AKGKRFCLPNARVMIHQPLGSFQGQATDIAIHTKEILQVKNNINKLIAKHTGKSIDIVIK 187
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSR 208
++RD +SA EA D+G+VD VL R
Sbjct: 188 DMERDCFLSADEAMDYGLVDCVLSKR 213
>gi|194761774|ref|XP_001963100.1| GF15771 [Drosophila ananassae]
gi|190616797|gb|EDV32321.1| GF15771 [Drosophila ananassae]
Length = 252
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 121/211 (57%), Positives = 162/211 (76%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++ CA + S + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ +
Sbjct: 12 INSAKCAGRTSLVRNINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVV 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+
Sbjct: 72 AQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLA 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG GMR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ +Y+E+
Sbjct: 132 AGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTSIYVKHAKNSYDEM 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++RDH M+ EA G++D VL +
Sbjct: 192 CSRMERDHFMTPEEAKTLGIIDHVLEHPPET 222
>gi|124025671|ref|YP_001014787.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|123960739|gb|ABM75522.1| Clp protease subunit [Prochlorococcus marinus str. NATL1A]
Length = 205
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 135/195 (69%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ ++P+V+E++ RGER++DIYSRLL+ERIVF+ + A I AQLLFLEA++P K+
Sbjct: 7 YRSMIPIVIEESGRGERAFDIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKD 66
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL AG KG R +L ++R
Sbjct: 67 IFLYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSR 126
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDI A +I+ IK +LN+ G+ E + + DRD MS SE
Sbjct: 127 IMIHQPLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQPIERIREDTDRDFYMSPSE 186
Query: 195 ACDWGVVDKVLMSRI 209
A ++G++D V R
Sbjct: 187 AIEYGIIDNVFNKRP 201
>gi|52842086|ref|YP_095885.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|54297778|ref|YP_124147.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila str. Paris]
gi|296107452|ref|YP_003619152.1| Protease subunit of ATP-dependent Clp protease [Legionella
pneumophila 2300/99 Alcoy]
gi|67460220|sp|Q5X451|CLPP_LEGPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460230|sp|Q5ZUD9|CLPP_LEGPH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52629197|gb|AAU27938.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|53751563|emb|CAH12981.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila str. Paris]
gi|295649353|gb|ADG25200.1| Protease subunit of ATP-dependent Clp protease [Legionella
pneumophila 2300/99 Alcoy]
Length = 214
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 122/202 (60%), Positives = 163/202 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ GL+PMV+EQT+RGERSYDIYSRLLKERI+F+ G++EDHMA L+ AQLLFLE
Sbjct: 5 SDNIIRNASGLIPMVIEQTSRGERSYDIYSRLLKERIIFLLGEVEDHMANLVVAQLLFLE 64
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+K+ISLYINSPGGVVTAG+AIYDTMQFIKP +ST C+GQAAS +LLL AG +G R
Sbjct: 65 SENPEKDISLYINSPGGVVTAGLAIYDTMQFIKPDVSTLCIGQAASAAALLLCAGAEGKR 124
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQA+DIE HA++ + ++ RLN I K+ KT +++ + +RD
Sbjct: 125 FCLPNSRVMIHQPLGGYRGQATDIEIHARETLAVRERLNNIMAKHTKKTPDQIMRDTERD 184
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA++A ++G++DKVL R
Sbjct: 185 NFMSATQAMEYGLIDKVLYDRQ 206
>gi|195146760|ref|XP_002014352.1| GL19149 [Drosophila persimilis]
gi|194106305|gb|EDW28348.1| GL19149 [Drosophila persimilis]
Length = 253
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 120/199 (60%), Positives = 157/199 (78%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++EN K I
Sbjct: 28 NLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIH 87
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR++LPNARI+
Sbjct: 88 LYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIM 147
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQA+DI HA++I+KIKR+L IYVK+ +YEE+ + ++RDH M+ EA
Sbjct: 148 IHQPSGGAQGQATDILIHAEEIIKIKRQLTSIYVKHAKNSYEEMCQRMERDHFMTPDEAK 207
Query: 197 DWGVVDKVLMSRIDIEEKS 215
G++D VL + S
Sbjct: 208 ILGIIDHVLEHPPETVSDS 226
>gi|126700971|ref|YP_001089868.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile 630]
gi|254976933|ref|ZP_05273405.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094319|ref|ZP_05323797.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255102503|ref|ZP_05331480.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-63q42]
gi|255308399|ref|ZP_05352570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316073|ref|ZP_05357656.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518732|ref|ZP_05386408.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651852|ref|ZP_05398754.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|260684879|ref|YP_003216164.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688537|ref|YP_003219671.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|306521636|ref|ZP_07407983.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|115252408|emb|CAJ70250.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Clostridium difficile]
gi|260211042|emb|CBA66381.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214554|emb|CBE07092.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
Length = 194
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 144/194 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT +GERSYDIYS+LLK+RI+F+ +I D +A+L+ AQLLFLE+E+P +I
Sbjct: 1 MSLVPHVIEQTGQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG T+G AIYDTM +++ +ST C+G AASM + LL+ G G R ALPN+ I
Sbjct: 61 IIYINSPGGSATSGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRCALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D++ +I+KIK RL++I +N GK+ E++ + DRD+ M+A EA
Sbjct: 121 MIHQPMGGAKGQATDVKIAVDNILKIKERLDKILSENTGKSIEDIRRDTDRDNFMTALEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D ++
Sbjct: 181 KEYGLIDYIMNRNE 194
>gi|42518794|ref|NP_964724.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
johnsonii NCC 533]
gi|116629940|ref|YP_815112.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
gasseri ATCC 33323]
gi|227889633|ref|ZP_04007438.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
johnsonii ATCC 33200]
gi|238853240|ref|ZP_04643625.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri 202-4]
gi|268319810|ref|YP_003293466.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
johnsonii FI9785]
gi|282851462|ref|ZP_06260827.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri 224-1]
gi|300361300|ref|ZP_07057477.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
gasseri JV-V03]
gi|311110427|ref|ZP_07711824.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri MV-22]
gi|67460349|sp|Q74K84|CLPP_LACJO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122273122|sp|Q042E8|CLPP_LACGA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|41583080|gb|AAS08690.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
johnsonii NCC 533]
gi|116095522|gb|ABJ60674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
gasseri ATCC 33323]
gi|227849776|gb|EEJ59862.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
johnsonii ATCC 33200]
gi|238834124|gb|EEQ26376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri 202-4]
gi|262398185|emb|CAX67199.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
johnsonii FI9785]
gi|282557430|gb|EFB63027.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri 224-1]
gi|300353919|gb|EFJ69790.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
gasseri JV-V03]
gi|311065581|gb|EFQ45921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
gasseri MV-22]
gi|329667657|gb|AEB93605.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
johnsonii DPC 6026]
Length = 195
Score = 221 bits (562), Expect = 7e-56, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K +++LN+I + G+ +++ K +RD+ +SA EA D
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKLNQILHETTGQPLDKILKDTERDNYLSAEEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D++L+++
Sbjct: 182 YGLIDEILVNQKK 194
>gi|116256436|sp|Q3AJN8|CLPP2_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 197
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 138/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ RGER++DIYSRLL+ERI+F+ + A I AQ+LFLEAE+P+K+I L
Sbjct: 1 MIPIVIEESGRGERAFDIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ IKP + T C+G AASMG+ LL AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN+ G+T + +++ DRD MS +EA +
Sbjct: 121 HQPLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMN 180
Query: 198 WGVVDKVLMSRI 209
+G++D V+ R
Sbjct: 181 YGLIDSVIDKRP 192
>gi|77128443|ref|YP_113048.2| ATP-dependent Clp protease proteolytic subunit [Methylococcus
capsulatus str. Bath]
gi|83301431|sp|Q60BE8|CLPP2_METCA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|66270664|gb|AAU93284.2| ATP-dependent Clp protease, proteolytic subunit ClpP [Methylococcus
capsulatus str. Bath]
Length = 195
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 113/191 (59%), Positives = 155/191 (81%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V+EQ+ RGER++DIYSRLLKER++F+ GQ+ED+MA L+ AQLLFLE+ENP K+I LY
Sbjct: 1 MPIVIEQSARGERAFDIYSRLLKERVIFLVGQVEDYMANLVIAQLLFLESENPDKDIHLY 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG+VTAG+AIYDTMQFIKP +ST C+GQAASMG+LLL+ G G R+ LP++RI++H
Sbjct: 61 INSPGGLVTAGLAIYDTMQFIKPDVSTLCVGQAASMGALLLAGGAAGKRYCLPHSRIMIH 120
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GGF GQASDI+ HA++I+ ++ RLN+I + G+ E+++ DRD+ M +A +
Sbjct: 121 QPLGGFQGQASDIDIHAREILAVRDRLNKILAHHTGQPIEKIQIDTDRDNFMGGDDAVSY 180
Query: 199 GVVDKVLMSRI 209
G++DKVL R
Sbjct: 181 GLIDKVLTHRT 191
>gi|295425564|ref|ZP_06818253.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylolyticus DSM 11664]
gi|295064740|gb|EFG55659.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
amylolyticus DSM 11664]
Length = 195
Score = 221 bits (562), Expect = 8e-56, Method: Composition-based stats.
Identities = 100/193 (51%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ + G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLHGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGLAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K ++++N+I + G+ ++++K +RD+ ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSRKKINKILHETTGQPLDKIQKDTERDNYLTAEEAKE 181
Query: 198 WGVVDKVLMSRID 210
+G++D++++++
Sbjct: 182 YGLIDEIMVNKKK 194
>gi|195051114|ref|XP_001993036.1| GH13604 [Drosophila grimshawi]
gi|193900095|gb|EDV98961.1| GH13604 [Drosophila grimshawi]
Length = 255
Score = 220 bits (561), Expect = 9e-56, Method: Composition-based stats.
Identities = 122/215 (56%), Positives = 159/215 (73%), Gaps = 1/215 (0%)
Query: 2 SFEGCAKKDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
SF+ V + L+PMVVEQT RGER+YDI+SRLLKERI+ + G I D +++ +
Sbjct: 12 SFQAKCSTQPLSVRGINLIPMVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVV 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++EN K I LYINSPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+
Sbjct: 72 AQLLFLQSENVNKPIHLYINSPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLA 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG GMR++LPNARI++HQPSGG GQA+DI HA++I+KIKR+L IYVK+ Y E+
Sbjct: 132 AGAPGMRYSLPNARIMIHQPSGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAQYDYAEM 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
++RDH M+ EA G++D VL + S
Sbjct: 192 SSRMERDHFMTPEEAKVLGIIDHVLEHPPETVSDS 226
>gi|288574917|ref|ZP_06393274.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570658|gb|EFC92215.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 192
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 99/191 (51%), Positives = 138/191 (72%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+EQT RGERSYDIYSRLLK+RIVF+ +I D +A + AQ+LFLE+ENP K+I
Sbjct: 2 YIPYVIEQTGRGERSYDIYSRLLKDRIVFIGDEINDGLANSVIAQMLFLESENPDKDIYF 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TAG+AIYDTMQ++K IST +G AASM ++LL+AG G R +LP +R+++
Sbjct: 62 YINSPGGSTTAGLAIYDTMQYVKCDISTIVVGIAASMAAVLLTAGTAGKRVSLPRSRVMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G+ASD+ ++I+ K LN I + G+ ++++ + ++D MSA EA
Sbjct: 122 HQPWGGARGKASDMAIQVKEILHTKETLNRILADHSGQDFDKICEDTEKDFYMSADEAMA 181
Query: 198 WGVVDKVLMSR 208
+G+VDKV+ R
Sbjct: 182 YGLVDKVIDRR 192
>gi|51892052|ref|YP_074743.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
gi|67460469|sp|Q67QZ4|CLPP2_SYMTH RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|51855741|dbj|BAD39899.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 200
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 103/200 (51%), Positives = 146/200 (73%), Gaps = 3/200 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P+V+EQT+RGERSYDIYSRLLK+RI+F+ I+D +A + AQLLFLE+++P KE
Sbjct: 1 MSSLIPIVIEQTSRGERSYDIYSRLLKDRIIFLGTSIDDQVANAVTAQLLFLESDDPDKE 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++YINS GG+ +AG+AIYDTMQ IKP ++T+ +G AASM ++LL AG G R+ALP+AR
Sbjct: 61 INMYINSSGGITSAGLAIYDTMQHIKPKVNTYAIGMAASMAAVLL-AGGTGTRYALPHAR 119
Query: 135 ILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
IL+HQP GQ +DIE A++++ K +L EI K+ G+ E+V++ +RD MSA
Sbjct: 120 ILIHQPWVKGGIGGQVTDIEITAKELLHTKEKLAEIIAKHTGQPLEKVKEDSERDRWMSA 179
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA +G+VD V+ R +
Sbjct: 180 EEAKAYGLVDVVVQPRERKK 199
>gi|302391290|ref|YP_003827110.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acetohalobium
arabaticum DSM 5501]
gi|302203367|gb|ADL12045.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acetohalobium
arabaticum DSM 5501]
Length = 199
Score = 220 bits (561), Expect = 1e-55, Method: Composition-based stats.
Identities = 112/198 (56%), Positives = 156/198 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
GLVPMVVEQTNRGERSYDIYSRLLK+RIVF+ I D +A L+ AQLLFLEAE+P K+
Sbjct: 1 MSGLVPMVVEQTNRGERSYDIYSRLLKDRIVFIGSPINDEIANLVIAQLLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG VT+ +AIYDTMQ+IKP +ST MG AAS G+LLL++G +G R+ALP +R
Sbjct: 61 IYIYINSPGGSVTSALAIYDTMQYIKPDVSTISMGLAASAGALLLASGAEGKRYALPYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP+GG G+A+DIE AQ+I+ +++ LN I + G+ E++E+ +DRD MS+ +
Sbjct: 121 IMIHQPAGGAEGRAADIEIQAQEILDLRKILNNILADHTGQPLEKIEEDVDRDFFMSSED 180
Query: 195 ACDWGVVDKVLMSRIDIE 212
A ++G++D+V+ + D++
Sbjct: 181 AKEYGIIDEVISRQEDLD 198
>gi|148359406|ref|YP_001250613.1| ATP-dependent Clp protease proteolytic subunit ClpP [Legionella
pneumophila str. Corby]
gi|166201828|sp|A5ID17|CLPP_LEGPC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148281179|gb|ABQ55267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Legionella
pneumophila str. Corby]
Length = 214
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 122/202 (60%), Positives = 162/202 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
GL+PMV+EQT+RGERSYDIYSRLLKERI+F+ G++EDHMA L+ AQLLFLE
Sbjct: 5 SDYIIRNASGLIPMVIEQTSRGERSYDIYSRLLKERIIFLLGEVEDHMANLVVAQLLFLE 64
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+K+ISLYINSPGGVVTAG+AIYDTMQFIKP +ST C+GQAAS +LLL AG +G R
Sbjct: 65 SENPEKDISLYINSPGGVVTAGLAIYDTMQFIKPDVSTLCIGQAASAAALLLCAGAEGKR 124
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQA+DIE HA++ + ++ RLN I K+ KT +++ + +RD
Sbjct: 125 FCLPNSRVMIHQPLGGYRGQATDIEIHARETLAVRERLNNIMAKHTKKTPDQIMRDTERD 184
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA++A ++G++DKVL R
Sbjct: 185 NFMSATQAMEYGLIDKVLYDRQ 206
>gi|27375722|ref|NP_767251.1| ATP-dependent Clp protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
gi|67460544|sp|Q89WR7|CLPP1_BRAJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|27348860|dbj|BAC45876.1| ATP-dependent protease proteolytic subunit [Bradyrhizobium
japonicum USDA 110]
Length = 200
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 121/197 (61%), Positives = 154/197 (78%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L LVPMVVEQ+ RGERS+DIYSRLL+ERI+F+ G++ D M+ L+CAQLLFLEAENP +
Sbjct: 4 MLQLVPMVVEQSARGERSFDIYSRLLRERIIFLNGEVNDAMSGLVCAQLLFLEAENPNRP 63
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINS GGVVT+G+A+YDTMQFIK P+ T CMG A SMGS LL AGE+G R ALPNA
Sbjct: 64 INLYINSYGGVVTSGLAMYDTMQFIKAPVHTLCMGTARSMGSFLLMAGERGHRAALPNAS 123
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+ +HQP GGF GQASDI HA ++ + KRR+ +Y ++CG+T EVE+TLDRDH M+A +
Sbjct: 124 LHVHQPLGGFQGQASDILIHANEMQETKRRITRLYAQHCGRTEAEVERTLDRDHFMTAQQ 183
Query: 195 ACDWGVVDKVLMSRIDI 211
+WG++D+V R
Sbjct: 184 GVEWGLIDRVFAERDAT 200
>gi|302335570|ref|YP_003800777.1| ATP-dependent Clp protease proteolytic subunit ClpP [Olsenella uli
DSM 7084]
gi|301319410|gb|ADK67897.1| ATP-dependent Clp protease proteolytic subunit ClpP [Olsenella uli
DSM 7084]
Length = 204
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 102/200 (51%), Positives = 140/200 (70%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ L+P V+EQT RGERSYDIYSRLL +RIVF+ +I A L+ AQLL LE+++
Sbjct: 2 HNPMATPLIPYVIEQTPRGERSYDIYSRLLNDRIVFLGEEITRDSANLVIAQLLHLESQD 61
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P K+ISLYI+SPGG V AG+ I DTM FIKP +ST C+G AASM S+LL+AG G R AL
Sbjct: 62 PDKDISLYIDSPGGEVYAGLGILDTMNFIKPDVSTICVGMAASMASVLLAAGTPGKRLAL 121
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PN+ I++HQPS G GQ +DI+ A + I+ +NE+ + G++ E++ +RD+ +
Sbjct: 122 PNSMIMIHQPSSGAQGQQTDIQIVADETKWIRNHMNELLAQYTGQSVEKINADTERDNYL 181
Query: 191 SASEACDWGVVDKVLMSRID 210
ASEA +G+VDKV+ SR +
Sbjct: 182 RASEAAAYGLVDKVISSRTE 201
>gi|295705211|ref|YP_003598286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
gi|294802870|gb|ADF39936.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
megaterium DSM 319]
Length = 338
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 150/193 (77%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ L P VVEQT++GER+YDIYSRLL +R++ +TG++ D +AT I AQLLFL+AENP+K+
Sbjct: 145 HMNLTPYVVEQTSKGERAYDIYSRLLLDRVIMLTGEVTDEVATSIIAQLLFLDAENPEKD 204
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG +TAGMAI+DTMQ I+ +ST C+G AASMGS LL+ G+KG RFALPN+
Sbjct: 205 ISIYINSPGGSITAGMAIFDTMQLIRADVSTLCIGLAASMGSFLLAGGQKGKRFALPNSE 264
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQA++IE A+ I+++K LNE+ + G++ ++K DRD +A E
Sbjct: 265 MMIHQPLGGAKGQAAEIEIRAKRILRLKDHLNELLSERTGQSLSTIKKDTDRDTFFTADE 324
Query: 195 ACDWGVVDKVLMS 207
A ++G++DK+L+
Sbjct: 325 AKEYGMIDKILVH 337
>gi|198433849|ref|XP_002124509.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
Length = 234
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 116/192 (60%), Positives = 153/192 (79%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+EQT RGER+YDIYSRLLKERIV + ++D ++ LI AQLLFL++E+PQK I++Y
Sbjct: 38 VPFVIEQTGRGERTYDIYSRLLKERIVCLMAPVDDFVSGLIVAQLLFLQSESPQKPINMY 97
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
IN+PGG VT+G+AIYDTMQ IK P+ST+ +GQA+SMGSLLL+AGE GMR ALPN+RI++H
Sbjct: 98 INTPGGTVTSGLAIYDTMQLIKCPVSTWVVGQASSMGSLLLAAGEPGMRNALPNSRIMVH 157
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG SGQASDI A +I K+K +LN++YV++ G+ YE +EK LDRD+ M EA +
Sbjct: 158 QPLGGASGQASDIVIQANEIKKVKEKLNKLYVQHTGQEYEVIEKALDRDNFMDPYEAKLF 217
Query: 199 GVVDKVLMSRID 210
G++D VL +
Sbjct: 218 GLIDNVLEPTSE 229
>gi|226356972|ref|YP_002786712.1| ATP-dependent Clp protease proteolytic subunit [Deinococcus deserti
VCD115]
gi|226318962|gb|ACO46958.1| putative Endopeptidase Clp [Deinococcus deserti VCD115]
Length = 200
Score = 220 bits (560), Expect = 1e-55, Method: Composition-based stats.
Identities = 100/196 (51%), Positives = 145/196 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT RGER YDIYSRLLK+RI+FV IE MA I AQLL L+++NP++EI
Sbjct: 1 MSVIPYVIEQTGRGERMYDIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPEQEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YIN PGG V AG+AIYDTM++IK P+ST C+G A SMGS+LL AG+KG R ALPN+RI
Sbjct: 61 QMYINCPGGEVYAGLAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRMALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ S GF G D+E A++++ ++ +L EIY ++ +E++ + ++RD+ MS EA
Sbjct: 121 MIHQGSAGFRGNTPDLEVQAKEVLHLRDKLVEIYHRHTDIPHEKLMRDMERDYFMSPEEA 180
Query: 196 CDWGVVDKVLMSRIDI 211
+G++D V+ + D+
Sbjct: 181 MRYGLIDSVIENTRDL 196
>gi|42525082|ref|NP_970462.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
gi|60389658|sp|Q6MH11|CLPP_BDEBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|39577293|emb|CAE81116.1| ATP-dependent Clp protease proteolytic subunit [Bdellovibrio
bacteriovorus HD100]
Length = 212
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 105/210 (50%), Positives = 151/210 (71%), Gaps = 3/210 (1%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ ++ + L+P V+EQT++GERSYDIYSRLLK+RI+ + + D +A I AQ+LF
Sbjct: 2 TPQSQPQETAVALIPYVIEQTSKGERSYDIYSRLLKDRIIILGTAVTDEVANSIIAQMLF 61
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE +NP+K I LYINSPGG V+AG+AIYD MQF+K ++T+CMG AASMGSLLL+AG KG
Sbjct: 62 LEVDNPEKPIHLYINSPGGSVSAGLAIYDFMQFVKCDVATYCMGMAASMGSLLLTAGTKG 121
Query: 126 MRFALPNARILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
MR++LPN RI++HQP SGQ +DIE HA+++VK K +L IY + G+ Y+ +
Sbjct: 122 MRYSLPNTRIMIHQPLLSGGGLSGQVTDIEIHAKELVKTKEKLTRIYETHTGRDYDTLRA 181
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++RD+ M +A ++G++D V+ SR +
Sbjct: 182 AMERDNFMDPYQAKEFGLLDHVVESRKAKK 211
>gi|159477909|ref|XP_001697051.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
gi|158274963|gb|EDP00743.1| catalytic subunit of mitochondrial ClpXP protease [Chlamydomonas
reinhardtii]
Length = 231
Score = 219 bits (559), Expect = 2e-55, Method: Composition-based stats.
Identities = 119/211 (56%), Positives = 154/211 (72%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S + + VP+V+EQT RGER+YDI+SRLLKERIV + G I+D+ + + A
Sbjct: 17 SLASSTVQAASVRSASYVPIVIEQTTRGERAYDIFSRLLKERIVVINGGIDDNTSNSVVA 76
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE++ P K I++YINSPGGVVTAG+AIYDTMQ+I+ PIST +GQAASM SLLL+A
Sbjct: 77 QLLFLESQAPDKPITMYINSPGGVVTAGLAIYDTMQYIRCPISTLVVGQAASMASLLLAA 136
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R +LPN+RI+LHQP G GQA+DI AQ+I+++K L +Y+K+ G T E E
Sbjct: 137 GAKGQRRSLPNSRIMLHQPLGAAEGQATDIMIRAQEIMRMKETLTSLYIKHTGCTREMAE 196
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
KTLDRD MSA EA DWG++D++L R E
Sbjct: 197 KTLDRDSFMSAQEAKDWGLIDEILTERPAAE 227
>gi|226944447|ref|YP_002799520.1| ATP-dependent Clp protease proteolytic subunit [Azotobacter
vinelandii DJ]
gi|226719374|gb|ACO78545.1| Peptidase S14, ClpP [Azotobacter vinelandii DJ]
Length = 211
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 119/193 (61%), Positives = 155/193 (80%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ GQ+ED+MA LI AQLLFLEAENP K+I
Sbjct: 16 GLVPMVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLIVAQLLFLEAENPDKDIH 75
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R++
Sbjct: 76 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGALLLAGGAAGKRYCLPHSRMM 135
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GGF GQASDIE HA++I+ I+ RLN+I + G+ + + + DRD+ MS EA
Sbjct: 136 IHQPLGGFQGQASDIEIHAREILTIRERLNKILAHHTGQPIDVIARDTDRDNFMSGEEAV 195
Query: 197 DWGVVDKVLMSRI 209
+ ++D+VL+ R
Sbjct: 196 KYRLIDQVLVHRQ 208
>gi|317470420|ref|ZP_07929809.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
gi|316902100|gb|EFV24025.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
Length = 202
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 101/200 (50%), Positives = 144/200 (72%), Gaps = 3/200 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+TN+GERSYDI+SRLL +RI+F+ ++ D A+LI AQ+LFLEA++P ++I
Sbjct: 1 MSTIPYVIEKTNQGERSYDIFSRLLSDRIIFLVEEVSDISASLIVAQMLFLEAQDPGRDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG AIYDTM++I+ ++T C+G AAS G+ LL+ G +G R ALPNA I
Sbjct: 61 QLYINSPGGSVTAGFAIYDTMKYIQCDVATICVGLAASFGAFLLAGGTQGKRMALPNAEI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP+ G ASDI+ + + K K+RLN I +N G++ EE+E+ DRDH MSA
Sbjct: 121 MIHQPAIHGNGIQGPASDIKIMSDYMQKNKQRLNRILAENTGRSIEEIERDTDRDHFMSA 180
Query: 193 SEACDWGVVDKVLMSRIDIE 212
EA +G++D V+ R +
Sbjct: 181 EEALKYGLIDSVISKRQKKQ 200
>gi|219681825|ref|YP_002468211.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|219682380|ref|YP_002468764.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|257471527|ref|ZP_05635526.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. LSR1 (Acyrthosiphon pisum)]
gi|219622113|gb|ACL30269.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Tuc7 (Acyrthosiphon pisum)]
gi|219624668|gb|ACL30823.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. 5A (Acyrthosiphon pisum)]
gi|311086200|gb|ADP66282.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. LL01 (Acyrthosiphon pisum)]
gi|311086777|gb|ADP66858.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. TLW03 (Acyrthosiphon pisum)]
gi|311087365|gb|ADP67445.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. JF99 (Acyrthosiphon pisum)]
gi|311087863|gb|ADP67942.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. JF98 (Acyrthosiphon pisum)]
Length = 208
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 112/202 (55%), Positives = 162/202 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K + + + +PMVVEQ +RGERSYDIYSRLLKERI+F+TG IED+MA I AQ+LFLE
Sbjct: 7 KNNKKSSYATFIPMVVEQHSRGERSYDIYSRLLKERIIFITGAIEDNMANNIVAQILFLE 66
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGG++T+GM+IYDTMQF+KP IST C+GQA SM +LLL++G KG R
Sbjct: 67 AENPEKDIFLYINSPGGIITSGMSIYDTMQFVKPEISTICLGQACSMAALLLTSGAKGKR 126
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+++++HQP GG+ GQASDI HA++I+++K++LN++ + G++ +++ K +RD
Sbjct: 127 FCLPNSKVMIHQPLGGYQGQASDIAIHAREIMEMKKKLNKLMSFHTGQSIKKINKDTERD 186
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SA+++ +G++D +L R
Sbjct: 187 CFLSANQSIKYGLIDFILSQRQ 208
>gi|94986250|ref|YP_605614.1| endopeptidase Clp [Deinococcus geothermalis DSM 11300]
gi|116243132|sp|Q1IWD9|CLPP_DEIGD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94556531|gb|ABF46445.1| Endopeptidase Clp [Deinococcus geothermalis DSM 11300]
Length = 200
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 142/197 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT RGER YDIYSRLLK+RI+FV IE MA I AQLL L+++NP +EI
Sbjct: 1 MSVIPYVIEQTGRGERMYDIYSRLLKDRIIFVGTPIESQMANTIVAQLLLLDSQNPDQEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YIN PGG V AG+AIYDTM++IK P+ST C+G A SMGS+LL AG+KG R ALPN+RI
Sbjct: 61 QMYINCPGGEVYAGLAIYDTMRYIKAPVSTICVGIAMSMGSVLLMAGDKGKRLALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ S GF G D+E A+++++++ L +IY ++ +E++ + ++RD+ MS EA
Sbjct: 121 MIHQGSAGFRGNTPDLEVQAKEVLRLRDTLIDIYHRHTNLPHEKLLRDMERDYFMSPYEA 180
Query: 196 CDWGVVDKVLMSRIDIE 212
+G++D V+ E
Sbjct: 181 QQYGLIDSVIEHTRQPE 197
>gi|91083021|ref|XP_974664.1| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli) [Tribolium
castaneum]
gi|270007650|gb|EFA04098.1| hypothetical protein TcasGA2_TC014333 [Tribolium castaneum]
Length = 258
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 109/194 (56%), Positives = 159/194 (81%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+VVEQ+ RG+R+YDIYSRLL+ERI+ + G I D+ +++I AQLLFL+AE+ K I +Y
Sbjct: 39 IPIVVEQSGRGDRAYDIYSRLLRERIICLMGPITDYTSSVIIAQLLFLQAESASKPIHMY 98
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+T+G+ IYDTMQ+I PP++T+C+GQA SM SL+L+AG KGMR +LPN+RI++H
Sbjct: 99 INSPGGVITSGLGIYDTMQYILPPVATWCVGQACSMASLILAAGAKGMRHSLPNSRIMIH 158
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG SGQA+DI+ A++I+K+K+++N +YVK+ E VE++++RD+ MS SEA ++
Sbjct: 159 QPSGGASGQATDIKIQAEEILKMKKQINCLYVKHTETALERVEQSVERDNFMSPSEALEF 218
Query: 199 GVVDKVLMSRIDIE 212
G++DKVL S +
Sbjct: 219 GIIDKVLTSPPKTK 232
>gi|238854870|ref|ZP_04645200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 269-3]
gi|256851455|ref|ZP_05556844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 27-2-CHN]
gi|260660876|ref|ZP_05861791.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 115-3-CHN]
gi|260664157|ref|ZP_05865010.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii SJ-7A-US]
gi|282931582|ref|ZP_06337075.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 208-1]
gi|282933455|ref|ZP_06338831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 208-1]
gi|297206270|ref|ZP_06923665.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
jensenii JV-V16]
gi|313472372|ref|ZP_07812864.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 1153]
gi|238832660|gb|EEQ24967.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 269-3]
gi|239529769|gb|EEQ68770.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 1153]
gi|256616517|gb|EEU21705.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 27-2-CHN]
gi|260548598|gb|EEX24573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 115-3-CHN]
gi|260562043|gb|EEX28012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii SJ-7A-US]
gi|281302386|gb|EFA94612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 208-1]
gi|281304193|gb|EFA96302.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
jensenii 208-1]
gi|297149396|gb|EFH29694.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
jensenii JV-V16]
Length = 193
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 104/192 (54%), Positives = 149/192 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEINDQMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL++G KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTSGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A++I+K +++LNEI + G+ E++ K +RD+ ++A EA D
Sbjct: 122 HQPLGGAQGQQTDIQIAAEEILKSRKKLNEILHETTGQPIEKILKDTERDNYLTAQEAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D+++ +
Sbjct: 182 YGLIDEIMTNMK 193
>gi|255657287|ref|ZP_05402696.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|296451860|ref|ZP_06893579.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879744|ref|ZP_06903718.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|296259339|gb|EFH06215.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429215|gb|EFH15088.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
Length = 194
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 101/194 (52%), Positives = 147/194 (75%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT++GERSYDIYS+LLK+RI+F+ +I D +A+L+ AQLLFLE+E+P +I
Sbjct: 1 MSLVPHVIEQTSQGERSYDIYSKLLKDRIIFIGEEINDAIASLVVAQLLFLESEDPDSDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG VTAG AIYDTM +++ +ST C+G AASM + LL+ G G R+ALPNA I
Sbjct: 61 IIYINSPGGSVTAGFAIYDTMNYVRCDVSTICIGMAASMSAFLLAGGTHGKRYALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D++ +I+KIK RL+ I+ +N GK+ E++ + DRD+ M+A EA
Sbjct: 121 MIHQPMGGAKGQATDVKIAVDNILKIKERLDRIFSENTGKSIEDIRRDTDRDNFMTALEA 180
Query: 196 CDWGVVDKVLMSRI 209
++G++D ++
Sbjct: 181 KEYGLIDYIMNRNE 194
>gi|54294748|ref|YP_127163.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila str. Lens]
gi|67460216|sp|Q5WVJ0|CLPP_LEGPL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|53754580|emb|CAH16064.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila str. Lens]
gi|307610564|emb|CBX00152.1| ATP-dependent Clp protease proteolytic subunit [Legionella
pneumophila 130b]
Length = 214
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 122/202 (60%), Positives = 162/202 (80%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ GL+PMV+EQT+RGERSYDIYSRLLKERI+F+ G++EDHMA L+ AQLLFLE
Sbjct: 5 SDNIIRNASGLIPMVIEQTSRGERSYDIYSRLLKERIIFLLGEVEDHMANLVVAQLLFLE 64
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ENP+K+ISLYINSPGGVVTAG+AIYDTMQFIKP +ST C+GQAAS +LLL AG G R
Sbjct: 65 SENPEKDISLYINSPGGVVTAGLAIYDTMQFIKPDVSTLCIGQAASAAALLLCAGADGKR 124
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+R+++HQP GG+ GQA+DIE HA++ + ++ RLN I K+ KT +++ + +RD
Sbjct: 125 FCLPNSRVMIHQPLGGYRGQATDIEIHARETLAVRERLNNIMAKHTKKTPDQIMRDTERD 184
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+ MSA++A ++G++DKVL R
Sbjct: 185 NFMSATQAMEYGLIDKVLYDRQ 206
>gi|15617073|ref|NP_240286.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
gi|11386686|sp|P57547|CLPP_BUCAI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25289846|pir||D84985 endopeptidase Clp (EC 3.4.21.92) [imported] - Buchnera sp. (strain
APS)
gi|10039138|dbj|BAB13172.1| ATP-dependent clp protease proteolytic subunit [Buchnera aphidicola
str. APS (Acyrthosiphon pisum)]
Length = 208
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 112/202 (55%), Positives = 161/202 (79%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K + + +PMVVEQ +RGERSYDIYSRLLKERI+F+TG IED+MA I AQ+LFLE
Sbjct: 7 KNNKTSSYATFIPMVVEQHSRGERSYDIYSRLLKERIIFITGAIEDNMANNIVAQILFLE 66
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AENP+K+I LYINSPGG++T+GM+IYDTMQF+KP IST C+GQA SM +LLL++G KG R
Sbjct: 67 AENPEKDIFLYINSPGGIITSGMSIYDTMQFVKPEISTICLGQACSMAALLLTSGAKGKR 126
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LPN+++++HQP GG+ GQASDI HA++I+++K++LN++ + G++ +++ K +RD
Sbjct: 127 FCLPNSKVMIHQPLGGYQGQASDIAIHAREIMEMKKKLNKLMSFHTGQSIKKINKDTERD 186
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
+SA+++ +G++D +L R
Sbjct: 187 CFLSANQSIKYGLIDFILSQRQ 208
>gi|323449375|gb|EGB05263.1| hypothetical protein AURANDRAFT_31167 [Aureococcus anophagefferens]
Length = 194
Score = 219 bits (558), Expect = 2e-55, Method: Composition-based stats.
Identities = 118/193 (61%), Positives = 156/193 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VPMV+E+++RGER++DIYSRLLKERI+ + G + D +A+++ AQLLFLE+E+P IS+
Sbjct: 1 MVPMVIERSSRGERAFDIYSRLLKERIIILNGPVHDELASVVTAQLLFLESEDPTSPISM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVTAG+AIYDTMQ+I+P ++T CMGQAASMGSLLL+AG GMR ALPNA+I+L
Sbjct: 61 YINSPGGVVTAGLAIYDTMQYIQPAVATLCMGQAASMGSLLLAAGADGMRRALPNAQIML 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG GQASDI A++I+K + +LN+IYV + K +VEK +DRD +A EA D
Sbjct: 121 HQPSGGAQGQASDIAIVAKEILKTRAKLNDIYVHHTKKPLADVEKVMDRDSYFTAQEAMD 180
Query: 198 WGVVDKVLMSRID 210
+GVVD+V+ R
Sbjct: 181 FGVVDEVVHPRTK 193
>gi|81428144|ref|YP_395143.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus sakei
subsp. sakei 23K]
gi|90101409|sp|Q38Y96|CLPP_LACSS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78609785|emb|CAI54831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
sakei subsp. sakei 23K]
Length = 194
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 108/193 (55%), Positives = 151/193 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT+RGER+YDIYSRLLK+RI+ ++G++ D MA I AQLLFL+A++ K+IS+
Sbjct: 2 LVPTVIEQTSRGERAYDIYSRLLKDRIIMLSGEVNDQMANTIIAQLLFLDAQDSDKDISI 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AI DTM FIK + T MG AASM S+LLSAG KG RFALPN+ +L+
Sbjct: 62 YINSPGGSVTAGLAIMDTMNFIKSDVQTIAMGMAASMASVLLSAGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ ++IE A++I+K ++RLN+I N G+T+E+++ DRD+ M+A EA D
Sbjct: 122 HQPLGGAQGQQTEIEIAAREILKTRKRLNQILADNSGQTFEKLQADTDRDNYMTAQEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D +++++
Sbjct: 182 YGLIDDIMVNQPK 194
>gi|73748509|ref|YP_307748.1| ATP-dependent Clp protease proteolytic subunit [Dehalococcoides sp.
CBDB1]
gi|147669290|ref|YP_001214108.1| endopeptidase Clp [Dehalococcoides sp. BAV1]
gi|289432557|ref|YP_003462430.1| endopeptidase Clp [Dehalococcoides sp. GT]
gi|115311356|sp|Q3ZX82|CLPP_DEHSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082455|sp|A5FRE5|CLPP_DEHSB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|73660225|emb|CAI82832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides sp. CBDB1]
gi|146270238|gb|ABQ17230.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Dehalococcoides sp. BAV1]
gi|288946277|gb|ADC73974.1| Endopeptidase Clp [Dehalococcoides sp. GT]
Length = 200
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 104/191 (54%), Positives = 146/191 (76%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VPMV+E + RGER++DIYS LLKERI+F+ QI D +A L+ AQLLFL+ E+P K+IS
Sbjct: 6 NVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDIS 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGGV++AG+A+YDTMQ I+P +ST C+G AASM ++LL AG KG R+ALPNA I
Sbjct: 66 LYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIH 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ GG GQASDIE A++I++ + L I VK+ G+T E++ DRD+ +SA +A
Sbjct: 126 MHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQTMEKIVHDSDRDYYLSAQQAV 185
Query: 197 DWGVVDKVLMS 207
++G++D++L
Sbjct: 186 EYGLIDEILQK 196
>gi|259501068|ref|ZP_05743970.1| ATP-dependent Clp protease [Lactobacillus iners DSM 13335]
gi|302190483|ref|ZP_07266737.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
AB-1]
gi|309803807|ref|ZP_07697892.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 11V1-d]
gi|309804605|ref|ZP_07698670.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 09V1-c]
gi|309805854|ref|ZP_07699889.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 03V1-b]
gi|309808282|ref|ZP_07702189.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 01V1-a]
gi|309809384|ref|ZP_07703246.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 2503V10-D]
gi|312870768|ref|ZP_07730874.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 3008A-a]
gi|312873057|ref|ZP_07733116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2062A-h1]
gi|312874331|ref|ZP_07734362.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2052A-d]
gi|312875077|ref|ZP_07735094.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2053A-b]
gi|315653872|ref|ZP_07906788.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
ATCC 55195]
gi|325913268|ref|ZP_08175636.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 60-B]
gi|329920382|ref|ZP_08277114.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 1401G]
gi|259167762|gb|EEW52257.1| ATP-dependent Clp protease [Lactobacillus iners DSM 13335]
gi|308164041|gb|EFO66303.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 11V1-d]
gi|308165997|gb|EFO68215.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 09V1-c]
gi|308167763|gb|EFO69907.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 03V1-b]
gi|308168485|gb|EFO70596.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LactinV 01V1-a]
gi|308170295|gb|EFO72326.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 2503V10-D]
gi|311089367|gb|EFQ47794.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2053A-b]
gi|311090097|gb|EFQ48510.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2052A-d]
gi|311091290|gb|EFQ49675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 2062A-h1]
gi|311093644|gb|EFQ51982.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners LEAF 3008A-a]
gi|315488568|gb|EFU78214.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus iners
ATCC 55195]
gi|325477371|gb|EGC80515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 60-B]
gi|328936058|gb|EGG32511.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners SPIN 1401G]
Length = 194
Score = 219 bits (557), Expect = 2e-55, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 147/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+R++ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRVIMLSGEINDTMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL+AG KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTAGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K + ++N I + G+ E+++ +RD ++A EA D
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSREKINSILHETTGQPLEKIQADTERDKYLTAQEAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D++L+++
Sbjct: 182 YGLIDEILVNKN 193
>gi|312143235|ref|YP_003994681.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Halanaerobium
sp. 'sapolanicus']
gi|311903886|gb|ADQ14327.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Halanaerobium
sp. 'sapolanicus']
Length = 198
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 109/199 (54%), Positives = 158/199 (79%), Gaps = 1/199 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQTNRGERSYDIYSRLLK+RIVF+ + D +A + AQLLFLEA+NP K+I
Sbjct: 1 MSLIPMVVEQTNRGERSYDIYSRLLKDRIVFLGSPVSDQVANTVIAQLLFLEADNPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTA +A+YDTMQ+IKP + T MGQAAS G+LLL+AG +G R+ALP AR+
Sbjct: 61 YLYINSPGGSVTAALAMYDTMQYIKPDVVTIGMGQAASAGALLLAAGAEGKRYALPYARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP+GG G+A++ E H +++++I+ LN+I ++ G+ E++ + +++D+ M+A EA
Sbjct: 121 MIHQPAGGAQGKATEAEIHIKELMRIRELLNQILSEHTGQDVEKIAQDVEKDYFMTAEEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
D+G++D+V+ R ++EEK
Sbjct: 181 LDYGIIDEVIT-RNELEEK 198
>gi|295100804|emb|CBK98349.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Faecalibacterium prausnitzii L2-6]
Length = 199
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 102/199 (51%), Positives = 148/199 (74%), Gaps = 6/199 (3%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP VVEQ+ GERSYDI+SRLL +RI+ ++ + D A+L+ AQLL+LE ++P K+I
Sbjct: 1 MSFVPYVVEQSAHGERSYDIFSRLLNDRIIVLSEDVNDTSASLVVAQLLYLEGQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG ++AGMAI+DT+Q+IK +ST CMG AASMG+ LL++G KG RFALPNA I
Sbjct: 61 SLYINSPGGSISAGMAIHDTIQYIKCDVSTICMGMAASMGAFLLASGTKGKRFALPNAEI 120
Query: 136 LLHQP------SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
++HQP GG SGQA+DI+ HA I++ + ++N + + G+ E+VE+ +RD+
Sbjct: 121 MIHQPLIAGGQGGGLSGQATDIKIHADHIIRTRAKMNRLLSEYTGQPLEKVEQDTERDNF 180
Query: 190 MSASEACDWGVVDKVLMSR 208
+SA EA ++G++D+V+ R
Sbjct: 181 LSAQEAKEYGLIDEVITHR 199
>gi|57234482|ref|YP_181451.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides ethenogenes 195]
gi|270308033|ref|YP_003330091.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
gi|115311355|sp|Q3Z8J8|CLPP_DEHE1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|57224930|gb|AAW39987.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dehalococcoides ethenogenes 195]
gi|270153925|gb|ACZ61763.1| ATP-dependent Clp protease, proteolytic subunit [Dehalococcoides
sp. VS]
Length = 200
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 102/191 (53%), Positives = 145/191 (75%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+VPMV+E + RGER++DIYS LLKERI+F+ QI D +A L+ AQLLFL+ E+P K+IS
Sbjct: 6 NVVPMVIESSARGERAFDIYSLLLKERIIFLGSQINDQVANLVIAQLLFLDREDPDKDIS 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGGV++AG+A+YDTMQ I+P +ST C+G AASM ++LL AG KG R+ALPNA I
Sbjct: 66 LYIHSPGGVISAGLAMYDTMQLIRPKVSTICVGVAASMATVLLCAGAKGKRYALPNATIH 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ GG GQASDIE A++I++ + L I VK+ G+ E++ DRD+ ++A +A
Sbjct: 126 MHQAMGGAQGQASDIEIAAREIMRQQDILRNILVKHTGQPMEKIIHDSDRDYYLNAQQAV 185
Query: 197 DWGVVDKVLMS 207
++G++D++L
Sbjct: 186 EYGLIDEILQK 196
>gi|149178551|ref|ZP_01857138.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
gi|148842569|gb|EDL56945.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
Length = 201
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 144/193 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L P V+E+ R ER+ DIYSRLL++RIV + Q+ D +A + AQLLFL+ ++P+ +
Sbjct: 1 MTVLTPYVIEKNGRDERAMDIYSRLLQDRIVMMGSQVNDQVAQSLVAQLLFLQFDDPEAD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG VTAGMAIYDTMQ+I ++T+C+GQAASMG+LLL+AG G R ALPN+R
Sbjct: 61 IHFYINSPGGSVTAGMAIYDTMQYISCDVATYCIGQAASMGALLLTAGAAGKRNALPNSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP G G A+D+E HA++++K+KRRLNEI + + G+T E++E+ DRD+ M A E
Sbjct: 121 IMIHQPLAGMQGTATDLEIHAKEVLKMKRRLNEILLHHTGQTLEKIEEDTDRDNFMDAQE 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D VL
Sbjct: 181 AKSYGLIDNVLEH 193
>gi|126727090|ref|ZP_01742927.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodobacterales bacterium HTCC2150]
gi|126703518|gb|EBA02614.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Rhodobacterales bacterium HTCC2150]
Length = 209
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 121/198 (61%), Positives = 160/198 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V E T+RG YDI+SRLLKERI+FV+G + D MAT I AQLLFLEA+NP KEI++
Sbjct: 12 VIPTVEETTSRGSIRYDIFSRLLKERIIFVSGPVHDEMATTIVAQLLFLEADNPTKEIAM 71
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G++IYDTMQ+IKP +ST C+GQAASMGSLLL+AGE GMR++LPN+RI++
Sbjct: 72 YINSPGGVVTSGLSIYDTMQYIKPKVSTVCIGQAASMGSLLLAAGEPGMRYSLPNSRIMV 131
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG+ GQA+DI HA + K+K RLN IYVK+ G+T ++V L+RD+ MSA EA
Sbjct: 132 HQPSGGYQGQATDIMIHAAETQKLKDRLNGIYVKHTGQTMKKVVDGLERDNFMSAEEAKS 191
Query: 198 WGVVDKVLMSRIDIEEKS 215
WG+VD+++ +R ++
Sbjct: 192 WGLVDEIVENRPKSDDDK 209
>gi|269120920|ref|YP_003309097.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sebaldella
termitidis ATCC 33386]
gi|268614798|gb|ACZ09166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Sebaldella
termitidis ATCC 33386]
Length = 190
Score = 219 bits (557), Expect = 3e-55, Method: Composition-based stats.
Identities = 103/187 (55%), Positives = 149/187 (79%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+E RGERSYDIYSRLLK+RI+F+ G++ED+MA I AQLLFL+A++ +K+I++YI
Sbjct: 4 PIVIENDGRGERSYDIYSRLLKDRIIFLGGEVEDNMANSIIAQLLFLDAQDSEKDITIYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGV+T+G+AIYDTM+ I +ST C+GQAASMG+LLL+AG KG R++LPN+RI++HQ
Sbjct: 64 NSPGGVITSGLAIYDTMRHINADVSTVCVGQAASMGALLLAAGTKGKRYSLPNSRIMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+D+ A+++ +IK +NEI + GK +E+ +RD+ M+A EA ++G
Sbjct: 124 PLGGAQGQATDVLIQAREMERIKTLVNEILSEATGKDIKEIYSDTERDNFMNADEALEYG 183
Query: 200 VVDKVLM 206
++DKV+
Sbjct: 184 LIDKVIK 190
>gi|320161063|ref|YP_004174287.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
gi|319994916|dbj|BAJ63687.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
Length = 201
Score = 218 bits (556), Expect = 3e-55, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 141/190 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++PMV+E + RGER+YDIYS LLKERIVFV I+D +A LI AQLLFL E+P+K+I
Sbjct: 8 SVIPMVIESSARGERAYDIYSLLLKERIVFVGTPIDDQIANLIVAQLLFLSREDPEKDIQ 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG++ AGMAIYDTMQ I IST +G AS G++LL+AG KG R+ALP+A I
Sbjct: 68 MYINCPGGLIYAGMAIYDTMQMIPNRISTVAVGVTASFGTVLLAAGSKGQRYALPHATIH 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++I+++K +LN+I + G+ + +E+ +RD M + +A
Sbjct: 128 MHQPLGGAQGQASDIEIQAREILRLKSQLNQILSQCTGQPMDVIERDTERDFYMDSYQAV 187
Query: 197 DWGVVDKVLM 206
++G+VDKVL
Sbjct: 188 EYGLVDKVLE 197
>gi|321265634|ref|XP_003197533.1| ATP-dependent Clp protease proteolytic subunit [Cryptococcus gattii
WM276]
gi|317464013|gb|ADV25746.1| ATP-dependent Clp protease proteolytic subunit, putative
[Cryptococcus gattii WM276]
Length = 260
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 119/208 (57%), Positives = 159/208 (76%), Gaps = 9/208 (4%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVP+VVEQT RGERSYDIYSRLL+ER+VF+ + +TL+ AQLLFLEAE+P++ I
Sbjct: 54 SLVPIVVEQTARGERSYDIYSRLLRERVVFLG-PVNSQDSTLLTAQLLFLEAEDPKRPIK 112
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGGVVT+G+AIYDTMQ+I PP+ TFCMGQAASMGSLLL+ GEKG R+AL N+ ++
Sbjct: 113 LYINSPGGVVTSGLAIYDTMQYISPPVHTFCMGQAASMGSLLLAGGEKGHRYALKNSSVM 172
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT-------YEEVEKTLDRDHI 189
+HQPSGG GQASDI HA++I++I+ L +IY ++C + + EK L+RD+
Sbjct: 173 IHQPSGGAQGQASDIALHAKEILRIRAALTDIYAEHCTRPGEERTVALDRFEKALERDYF 232
Query: 190 MSASEACDWGVVDKVLMSR-IDIEEKSK 216
M++ EA D+G+VDK++ R + E+ K
Sbjct: 233 MTSEEAIDFGIVDKIVTQRGKEASEEEK 260
>gi|325911461|ref|ZP_08173873.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 143-D]
gi|325476811|gb|EGC79965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lactobacillus iners UPII 143-D]
Length = 194
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 147/192 (76%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+R++ ++G+I D MA I AQLLFL+A++ K+ISL
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRVIMLSGEINDTMANSIIAQLLFLDAQDNTKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+G+AI DTM FIK +ST +G AASM S+LL+AG KG RFALPN+ +L+
Sbjct: 62 YINSPGGVITSGLAIMDTMNFIKSDVSTIAIGMAASMASILLTAGTKGKRFALPNSTVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQ +DI+ A +I+K + ++N I + G+ E+++ +RD ++A EA +
Sbjct: 122 HQPLGGAQGQQTDIQIAANEILKSREKINSILHETTGQPLEKIQADTERDKYLTAQEAKN 181
Query: 198 WGVVDKVLMSRI 209
+G++D++L+++
Sbjct: 182 YGLIDEILVNKN 193
>gi|167750809|ref|ZP_02422936.1| hypothetical protein EUBSIR_01791 [Eubacterium siraeum DSM 15702]
gi|167656244|gb|EDS00374.1| hypothetical protein EUBSIR_01791 [Eubacterium siraeum DSM 15702]
gi|291530696|emb|CBK96281.1| ATP-dependent Clp protease proteolytic subunit ClpP [Eubacterium
siraeum 70/3]
gi|291557795|emb|CBL34912.1| ATP-dependent Clp protease proteolytic subunit ClpP [Eubacterium
siraeum V10Sc8a]
Length = 195
Score = 218 bits (556), Expect = 4e-55, Method: Composition-based stats.
Identities = 105/195 (53%), Positives = 145/195 (74%), Gaps = 2/195 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT RGER+YDI+SRLL +RI+ + ++ + A L+ AQLLFLE ++P K+I
Sbjct: 1 MSLVPTVIEQTGRGERAYDIFSRLLNDRIIMLNEEVNNVTAGLVVAQLLFLEGQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG ++AGMAIYDTM +IK +ST C+G AASMG+ LLS+G KG RF LPN+ +
Sbjct: 61 SLYINSPGGSISAGMAIYDTMNYIKCDVSTICVGMAASMGAFLLSSGAKGKRFCLPNSEV 120
Query: 136 LLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++HQP SGQ +DI HA+ + K + L +I +NCGK+YE++ K +RD+ +SA
Sbjct: 121 MIHQPLISGGLSGQQTDITIHAKYLEKTRETLEKIMAENCGKSYEQLHKDCERDNFLSAE 180
Query: 194 EACDWGVVDKVLMSR 208
EAC +G+VDKV+ R
Sbjct: 181 EACAYGLVDKVIAKR 195
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 218 bits (555), Expect = 5e-55, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 150/193 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ P+V+E RGERSYDIYSRLLK+RI+FV+G++ED MA I AQLLFL+A++ +
Sbjct: 16 NNMSAYSPVVIENDGRGERSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNE 75
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGGV+TAG+AIYDTM+ IK +ST C+GQAASMG++LL+AG KG R++LPN
Sbjct: 76 KDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPN 135
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA+DI+ A++I ++K ++I + GK+ EE+ +RD+ MS
Sbjct: 136 SRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSP 195
Query: 193 SEACDWGVVDKVL 205
EA ++G++DK+L
Sbjct: 196 EEAVNYGLIDKIL 208
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 106/193 (54%), Positives = 150/193 (77%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ P+V+E RGERSYDIYSRLLK+RI+FV+G++ED MA I AQLLFL+A++ +
Sbjct: 11 NNMSVYSPVVIENDGRGERSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNE 70
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGGV+TAG+AIYDTM+ IK +ST C+GQAASMG++LLSAG KG R++LPN
Sbjct: 71 KDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPN 130
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA+DI+ A++I ++K ++I + GK+ EE+ +RD+ MS
Sbjct: 131 SRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSP 190
Query: 193 SEACDWGVVDKVL 205
EA ++G++DK+L
Sbjct: 191 EEAVNYGLIDKIL 203
>gi|257468340|ref|ZP_05632434.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|317062614|ref|ZP_07927099.1| endopeptidase Clp [Fusobacterium ulcerans ATCC 49185]
gi|313688290|gb|EFS25125.1| endopeptidase Clp [Fusobacterium ulcerans ATCC 49185]
Length = 191
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 108/188 (57%), Positives = 145/188 (77%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P VVE T R ER+YDIYSRLLK+RI+F+ +I+D++A I AQLLFLEAE+P K+I +YI
Sbjct: 4 PTVVESTGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVVTAGMAIYDTM +IKP + T C+GQAASMG+LLL AG KG R+AL ++RI++HQ
Sbjct: 64 NSPGGVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGAKGKRYALEHSRIMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A++I+++K L++I GK+ E+ +RD+ MSA EA ++G
Sbjct: 124 PLGGARGQATDIEIQAKEILRMKEMLSQIMADCTGKSLSEILNDTERDNYMSAEEAKNYG 183
Query: 200 VVDKVLMS 207
++D+V
Sbjct: 184 LIDQVFKK 191
>gi|149196344|ref|ZP_01873399.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Lentisphaera araneosa HTCC2155]
gi|149140605|gb|EDM29003.1| ATP-dependent Clp protease, proteolytic subunit (ClpP)
[Lentisphaera araneosa HTCC2155]
Length = 199
Score = 217 bits (554), Expect = 5e-55, Method: Composition-based stats.
Identities = 101/192 (52%), Positives = 141/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VPMVVEQ+ GER YDIYSRLLK+RIV ++ ++DH+A+L+ AQ LFL+AE+P+K+I
Sbjct: 8 YVPMVVEQSANGERGYDIYSRLLKDRIVMLSTPVDDHVASLLVAQFLFLQAEDPKKDIQF 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
+INSPGG VTAG+ IYDTMQ + I T C+GQAASMG++LLSAG G R+ LP++R+++
Sbjct: 68 FINSPGGSVTAGLMIYDTMQILSCDIQTVCIGQAASMGAVLLSAGTAGKRYCLPHSRVMI 127
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG G A+DI A +I ++K+ L +I + GK Y +E+ DRD+ MS EA
Sbjct: 128 HQPSGGAGGTAADITIQAAEIKRLKKELYDILSHHTGKDYPTIEEDSDRDYFMSGEEAKA 187
Query: 198 WGVVDKVLMSRI 209
+G+VD ++ +
Sbjct: 188 YGLVDHIMTKKA 199
>gi|226227816|ref|YP_002761922.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
gi|226091007|dbj|BAH39452.1| ATP-dependent Clp protease proteolytic subunit [Gemmatimonas
aurantiaca T-27]
Length = 204
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 100/195 (51%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P ++E+++RGER+YDI+SRLL +RI+F+ I D +A +I AQ+LFL+A+NP+K I L
Sbjct: 5 YMPYIIERSSRGERTYDIFSRLLMDRIIFLGSPINDDVANIIIAQMLFLDADNPEKPIHL 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+A+YDTMQFIK P+ T CMG AASMG+ LL AG G R ALP++RI++
Sbjct: 65 YINSPGGSVSAGLAMYDTMQFIKAPVYTTCMGMAASMGAFLLCAGAPGHRAALPHSRIMI 124
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS G ASDIE A++I+ ++ ++NE+ K+ G+ E+VE+ DRD MSA +A
Sbjct: 125 HQPSQNGGGGSASDIEIQAREILYLRAKMNELMAKHTGRQVEQVERDTDRDRFMSADDAK 184
Query: 197 DWGVVDKVLMSRIDI 211
++G++D V+ + ++
Sbjct: 185 EYGLIDNVIQVQAEL 199
>gi|225419706|ref|ZP_03762009.1| hypothetical protein CLOSTASPAR_06044 [Clostridium asparagiforme
DSM 15981]
gi|225041643|gb|EEG51889.1| hypothetical protein CLOSTASPAR_06044 [Clostridium asparagiforme
DSM 15981]
Length = 198
Score = 217 bits (554), Expect = 6e-55, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 141/197 (71%), Gaps = 3/197 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+VVEQT RGERSYDIYSRLL +RI+F+ ++ + A+LI A+LLFLEA++PQK++
Sbjct: 1 MSAIPIVVEQTGRGERSYDIYSRLLSDRIIFLGEEVSETSASLIIAELLFLEAQDPQKDV 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG VTAG AIYDTM+ I+ +ST C+G AAS G+ LL+ G +G R ALPN++I
Sbjct: 61 QFYINSPGGSVTAGFAIYDTMRHIRCDVSTICIGLAASFGAFLLAGGTRGKRLALPNSQI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQP+ G ASDI + + K ++RLN I +N G T E+E+ +RD+ MSA
Sbjct: 121 MIHQPAMSGRGIQGPASDILIMSDYMQKSRQRLNRILAENTGHTPLEIERDTERDNFMSA 180
Query: 193 SEACDWGVVDKVLMSRI 209
EA ++G++D ++ R
Sbjct: 181 EEALEYGLIDSIIAKRQ 197
>gi|28377639|ref|NP_784531.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum WCFS1]
gi|254555818|ref|YP_003062235.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum JDM1]
gi|300767608|ref|ZP_07077518.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308179799|ref|YP_003923927.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|38257529|sp|Q88YH9|CLPP_LACPL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|28270472|emb|CAD63374.1| endopeptidase Clp, proteolytic subunit [Lactobacillus plantarum
WCFS1]
gi|254044745|gb|ACT61538.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum JDM1]
gi|300494593|gb|EFK29751.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|308045290|gb|ADN97833.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 196
Score = 217 bits (554), Expect = 7e-55, Method: Composition-based stats.
Identities = 106/194 (54%), Positives = 149/194 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP V+EQ++RGER+YDIYSRLLK+RI+ ++G IED+MA I AQLLFL+A++ K+I
Sbjct: 1 MYPVPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIEDNMANAIIAQLLFLDAQDSGKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVVTAG+AIYDTM FIK + T MG AASM S+L S+G KG RFALPN+ I
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKSDVQTIVMGMAASMASVLASSGTKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPSGG GQ ++IE A++I+K ++++N+I N G++ E++ +RD+ +SA EA
Sbjct: 121 LIHQPSGGAQGQQTEIEIVAEEILKTRKKINQILADNSGQSVEKLNHDTERDNYLSAQEA 180
Query: 196 CDWGVVDKVLMSRI 209
D+G++D ++ +
Sbjct: 181 KDYGLIDDIMENNK 194
>gi|309388894|gb|ADO76774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halanaerobium
praevalens DSM 2228]
Length = 198
Score = 217 bits (553), Expect = 7e-55, Method: Composition-based stats.
Identities = 111/199 (55%), Positives = 159/199 (79%), Gaps = 1/199 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+PMVVEQTNRGERSYDIYSRLLK+RIVF+ Q+ D +A + AQLLFLEA+NP K+I
Sbjct: 1 MSLIPMVVEQTNRGERSYDIYSRLLKDRIVFLGSQVTDQVANTVIAQLLFLEADNPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTA +A+YDTMQ+IKP + T MGQAAS G+LLL+AG +G R+ALP AR+
Sbjct: 61 YLYINSPGGSVTAALAMYDTMQYIKPDVVTIGMGQAASAGALLLAAGAEGKRYALPYARV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP+GG G+A++ E H +++++I+ LNEI ++ G+T E++ + +++D+ M+A EA
Sbjct: 121 MIHQPAGGAQGKATEAEIHIKELMRIRELLNEILSQHTGQTAEKIAQDVEKDYFMTAKEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
D+G++D+V+ R ++ EK
Sbjct: 181 VDYGLIDEVIT-RNELNEK 198
>gi|225621123|ref|YP_002722381.1| ATP-dependent Clp protease proteolytic subunit [Brachyspira
hyodysenteriae WA1]
gi|259585945|sp|C0QW91|CLPP_BRAHW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225215943|gb|ACN84677.1| ATP-dependent Clp protease proteolytic subunit [Brachyspira
hyodysenteriae WA1]
Length = 198
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 107/198 (54%), Positives = 152/198 (76%), Gaps = 1/198 (0%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
E ++ +P V+EQT+RGERSYDIYSRLLK+RI+F+ G+I D +A ++ AQLLFLE+ +P
Sbjct: 2 EKNYMT-IPYVIEQTSRGERSYDIYSRLLKDRIIFLGGEINDDVANVVIAQLLFLESADP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGGVVTA + +YDTMQ++KP ++T C+GQAAS G+LLL+ G KG RFA
Sbjct: 61 EKDISLYINSPGGVVTAALGMYDTMQYVKPDVATLCVGQAASAGALLLAGGAKGKRFATA 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPSGG G +D+E ++ +++K LN I + G+ +++E +DRD+ MS
Sbjct: 121 NSRIMIHQPSGGSRGMVTDMEIQLKETIRLKSILNNIMANHTGQDIKKLEADMDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA D+G++DKV SR
Sbjct: 181 AEEAKDYGIIDKVFSSRE 198
>gi|116622996|ref|YP_825152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Solibacter usitatus Ellin6076]
gi|116226158|gb|ABJ84867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Solibacter usitatus Ellin6076]
Length = 206
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 109/193 (56%), Positives = 153/193 (79%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVPMVVEQT+RGER+YDIYSRLLKE I+F+ I+D +A LI AQLLFLEAE+P+K+IS+
Sbjct: 6 LVPMVVEQTSRGERAYDIYSRLLKENIIFLGTPIDDQVANLIIAQLLFLEAEDPEKDISI 65
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG +TAG+AI DTM FI+P I T C+GQAASM ++LL+ G KG RF+LPN+RI++
Sbjct: 66 YVNSPGGSITAGLAILDTMAFIRPDIVTICVGQAASMAAVLLAKGTKGKRFSLPNSRIMI 125
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS +GQA+DI+ +A++I++++ LN + G++ E V K +DRD+IM +A
Sbjct: 126 HQPSMQGLAGQAADIDIYAREILRMREILNSMLADATGQSIERVAKDVDRDYIMEPDQAV 185
Query: 197 DWGVVDKVLMSRI 209
++G++D+V+ SR
Sbjct: 186 NYGMIDRVITSRD 198
>gi|325507187|gb|ADZ18825.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
psittaci 6BC]
Length = 200
Score = 217 bits (553), Expect = 8e-55, Method: Composition-based stats.
Identities = 97/197 (49%), Positives = 147/197 (74%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE T RGER+ DIYSRLLK+RIV + +I + +A + AQLLFL +E+P+K+I ++
Sbjct: 1 MPYVVEDTGRGERAMDIYSRLLKDRIVMIGQEITEPLANTVIAQLLFLMSEDPKKDIKVF 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAG+AIYDT++F+ ++T+C+GQAASMG+LLLSAG KG R+ALP++R+++H
Sbjct: 61 INSPGGYITAGLAIYDTIRFLGCDVNTYCIGQAASMGALLLSAGTKGKRYALPHSRMMIH 120
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G ++DI+ A +I+ +K+ L I + G+ E++ + +RD M A +A +
Sbjct: 121 QPSGGIIGTSADIQLQAAEILTLKKHLANILSECTGQPVEKIIEDSERDFFMGAEDAISY 180
Query: 199 GVVDKVLMSRIDIEEKS 215
G++DKV+ S D ++K
Sbjct: 181 GLIDKVVSSAKDTKDKD 197
>gi|237736664|ref|ZP_04567145.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420526|gb|EEO35573.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 191
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 109/188 (57%), Positives = 148/188 (78%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+E R ER+YDIYSRLLK+RI+F+ +I+D++A I AQLLFLEAE+P+K+I +YI
Sbjct: 4 PTVIENNGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVVTAGMAIYDTM +IKP + T C+GQAASMG+LLLSAG KG RFAL ++RI++HQ
Sbjct: 64 NSPGGVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLSAGAKGKRFALEHSRIMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A++I+++K L++I GK+ EE+ + +RD+ MSA EA ++G
Sbjct: 124 PLGGARGQATDIEIQAKEILRMKEMLSQILANVSGKSVEEILRDTERDNYMSAQEAVEYG 183
Query: 200 VVDKVLMS 207
++D+V
Sbjct: 184 LIDQVFKK 191
>gi|330836759|ref|YP_004411400.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
coccoides DSM 17374]
gi|329748662|gb|AEC02018.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
coccoides DSM 17374]
Length = 200
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 105/198 (53%), Positives = 149/198 (75%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D + LVP+VVEQ+ GERSYDI+SRLLK+RI+F+ G+I D A L AQLLFLE+E
Sbjct: 2 DRTERMNSLVPVVVEQSGIGERSYDIFSRLLKDRIIFLDGEINDVTADLAVAQLLFLESE 61
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P K+ISLYINSPGG VTAG+AIYDT+Q+I + T C+GQAASM +LLL++G G RF
Sbjct: 62 DPSKDISLYINSPGGSVTAGLAIYDTIQYIHSDVQTICIGQAASMAALLLTSGAAGKRFI 121
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LP+AR+++HQP GG GQA+DI HA+++ +IK+ +I+ ++ G ++V+K L+RD+
Sbjct: 122 LPSARVMIHQPWGGVQGQATDIGIHAREMSRIKQLTVDIFARHTGHPADQVKKDLERDYF 181
Query: 190 MSASEACDWGVVDKVLMS 207
++A +A +G+VD V+
Sbjct: 182 LAAPDAVAYGIVDHVMKR 199
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 217 bits (552), Expect = 1e-54, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 153/199 (76%), Gaps = 2/199 (1%)
Query: 14 VFLGLVP--MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
++ G +P VVE ++RGER++DIYSRLLK+RIVF+ ++ D +A +I AQLL+LE+E+
Sbjct: 4 IYNGYIPNPYVVESSHRGERTWDIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDA 63
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+KEI LYINSPGG VTAGMAIYDTMQ I+ P++T C+GQAASMG+LLL+AG G+R +LP
Sbjct: 64 EKEIMLYINSPGGSVTAGMAIYDTMQHIRCPVATVCVGQAASMGALLLAAGSAGLRRSLP 123
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
N+RI++HQPS F GQASDIE HA++I+ ++R NEI + ++ E++ K +RD+ +
Sbjct: 124 NSRIMIHQPSSAFRGQASDIEIHAKEILHTRQRTNEILAHHTKRSIEQIAKDTERDNFLQ 183
Query: 192 ASEACDWGVVDKVLMSRID 210
S+A ++G++D+++
Sbjct: 184 PSKALEFGIIDEIIEPSKK 202
>gi|253581496|ref|ZP_04858721.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
gi|251836566|gb|EES65101.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
varium ATCC 27725]
Length = 191
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 107/188 (56%), Positives = 145/188 (77%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P VVE T R ER+YDIYSRLLK+RI+F+ +I+D++A I AQLLFLEAE+P K+I +YI
Sbjct: 4 PTVVESTGRSERAYDIYSRLLKDRIIFLGTEIDDNVANAIVAQLLFLEAEDPDKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVVTAGMAIYDTM +IKP + T C+GQAASMG+LLL AG +G R+AL ++RI++HQ
Sbjct: 64 NSPGGVVTAGMAIYDTMNYIKPDVQTVCIGQAASMGALLLGAGARGKRYALEHSRIMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A++I+++K L++I GK+ E+ +RD+ MSA EA ++G
Sbjct: 124 PLGGARGQATDIEIQAKEILRMKEMLSQILADCTGKSLSEIITDTERDNYMSAEEAKNYG 183
Query: 200 VVDKVLMS 207
++D+V
Sbjct: 184 LIDQVFKK 191
>gi|300856458|ref|YP_003781442.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
gi|300436573|gb|ADK16340.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ljungdahlii DSM 13528]
Length = 194
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 111/194 (57%), Positives = 149/194 (76%), Gaps = 2/194 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V++ TN GERSYDI+SRLLK+RIV + GQ+ D A+ I AQLLFLE++NP +I
Sbjct: 1 MSYVPVVIDHTNAGERSYDIFSRLLKDRIVMLNGQVTDEAASSIVAQLLFLESDNPDSDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+ YINSPGG +TAGMAIYDTMQ+I+ +ST C+G AASMGS LL+AG KG RFALPN+ I
Sbjct: 61 NFYINSPGGSITAGMAIYDTMQYIRSDVSTICVGMAASMGSFLLAAGAKGKRFALPNSEI 120
Query: 136 LLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
L+HQPS GQA+DIE H + ++ IK+++N +Y + GK E++EK ++RD+ MSA
Sbjct: 121 LIHQPSVYGGMQGQATDIEIHTKWLLGIKKKMNRLYSEMTGKPIEKIEKDVERDYFMSAK 180
Query: 194 EACDWGVVDKVLMS 207
EA D+G+VDK+L
Sbjct: 181 EALDYGLVDKILSK 194
>gi|300087790|ref|YP_003758312.1| endopeptidase Clp [Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527523|gb|ADJ25991.1| Endopeptidase Clp [Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 205
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 97/194 (50%), Positives = 141/194 (72%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++PMV+E ++RGERS+DIYS LLKERIVF+ +I D +A I AQLLFL+ E+P K+IS
Sbjct: 9 NIIPMVIESSSRGERSFDIYSLLLKERIVFLGTEINDQVANTIIAQLLFLDREDPDKDIS 68
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGGV++AG+AIYDT+Q I+P +ST C+G AASM ++LL AG KG RFALPN+ I
Sbjct: 69 LYIHSPGGVISAGLAIYDTIQLIRPKVSTICVGMAASMATVLLCAGAKGKRFALPNSTIH 128
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ GG GQASDI A++I +++ + +I G+ +++ DRD+ ++ +A
Sbjct: 129 MHQAIGGARGQASDIVIQAKEITRLQDIIRDILAARTGQPLDKIIHDTDRDYYLNPVQAK 188
Query: 197 DWGVVDKVLMSRID 210
++G++D +L D
Sbjct: 189 EYGLIDDILKKPED 202
>gi|296127043|ref|YP_003634295.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brachyspira
murdochii DSM 12563]
gi|296018859|gb|ADG72096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brachyspira
murdochii DSM 12563]
Length = 200
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 108/200 (54%), Positives = 153/200 (76%), Gaps = 1/200 (0%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
D E ++ +P V+EQT+RGERSYDIYSRLLK+RI+F+ G+I D +A ++ AQLLFLE+
Sbjct: 2 DLERNYMT-IPYVIEQTSRGERSYDIYSRLLKDRIIFLGGEINDDVANIVIAQLLFLESA 60
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P+K+ISLYINSPGGVVTA + +YDTMQ++KP ++T C+GQAAS G+LLL+ G KG RFA
Sbjct: 61 DPEKDISLYINSPGGVVTAALGMYDTMQYVKPDVATLCVGQAASAGALLLAGGAKGKRFA 120
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
N+RI++HQPSGG G +D+E ++ +++K LN I + G+ +++E +DRD+
Sbjct: 121 TANSRIMIHQPSGGSRGMVTDMEIQLKETIRLKSILNNIMANHTGQDIKKLEADMDRDYF 180
Query: 190 MSASEACDWGVVDKVLMSRI 209
MSA EA D+G++DKV SR
Sbjct: 181 MSADEAKDYGIIDKVFSSRE 200
>gi|327480673|gb|AEA83983.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
stutzeri DSM 4166]
Length = 192
Score = 216 bits (551), Expect = 1e-54, Method: Composition-based stats.
Identities = 115/189 (60%), Positives = 152/189 (80%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+EQ+ RGER+YDIYSRLLKER++F+ GQ+ED+MA LI AQLLFLEAENP+K+I LYIN
Sbjct: 1 MVIEQSARGERAYDIYSRLLKERVIFMVGQVEDYMANLIVAQLLFLEAENPEKDIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+LLL+ G G R+ LP++R+++HQP
Sbjct: 61 SPGGSVTAGMSIYDTMQFIKPNVSTICIGQACSMGALLLAGGAAGKRYCLPHSRMMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDIE HA++I+ I+ RLN++ + G+ + + + DRD+ MS EA +G+
Sbjct: 121 LGGFQGQASDIEIHAREILTIRERLNKVLAHHTGQPMDVIARDTDRDNFMSGEEAVKYGL 180
Query: 201 VDKVLMSRI 209
+D+VL R
Sbjct: 181 IDQVLTQRQ 189
>gi|294054261|ref|YP_003547919.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
gi|293613594|gb|ADE53749.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
Length = 197
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 100/191 (52%), Positives = 144/191 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V E+ R ER++DIYSRLL++RI+F+ I D +A + AQ+LFL+ E+P+K+ISLY
Sbjct: 6 LPTVYEREGRTERAWDIYSRLLRDRIIFIGTPINDFVANAVIAQMLFLQMEDPKKDISLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VT GMAIYDTM F++ + T+C+GQAASM +LLL+AG G R+ALPN+R+++H
Sbjct: 66 INSPGGSVTDGMAIYDTMNFLQCDVVTYCVGQAASMATLLLAAGTPGKRYALPNSRVMMH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+GG +GQ SDI A++I++ + R+N + + KT EEV DRD ++A +ACD+
Sbjct: 126 QPTGGATGQTSDISIAAKEILRWRERMNSLIASHTNKTAEEVAADSDRDFYLTAQDACDY 185
Query: 199 GVVDKVLMSRI 209
G+VDKV+ S+
Sbjct: 186 GLVDKVIESKP 196
>gi|320102927|ref|YP_004178518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
gi|319750209|gb|ADV61969.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
Length = 198
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 139/192 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP+V+E + ER DIYSRLL++RI+ + I++ ++ + AQLL+L +E+P+ +I
Sbjct: 1 MPRVPVVIEGSGPDERVIDIYSRLLRDRIIILGTAIDESVSNSVVAQLLYLASEDPKADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAG+AIYD MQ + ++T+C+GQ ASMGSLLL+AG G R A+P+ RI
Sbjct: 61 RLYINSPGGSVTAGLAIYDMMQSVPCDVATYCIGQCASMGSLLLAAGAAGKRHAMPHGRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G G A+DI HA++ +++K++LN IY + G++ E++E+ DRD MS EA
Sbjct: 121 MIHQPLAGMEGTATDIMIHAEEFLRMKKQLNGIYNHHTGQSLEKLEQDTDRDRFMSPREA 180
Query: 196 CDWGVVDKVLMS 207
++G++D +++
Sbjct: 181 KEYGLIDHIVVH 192
>gi|116327862|ref|YP_797582.1| protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116330746|ref|YP_800464.1| protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
gi|116120606|gb|ABJ78649.1| Protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis L550]
gi|116124435|gb|ABJ75706.1| Protease subunit of endopeptidase Clp [Leptospira borgpetersenii
serovar Hardjo-bovis JB197]
Length = 195
Score = 216 bits (550), Expect = 2e-54, Method: Composition-based stats.
Identities = 107/190 (56%), Positives = 152/190 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT+RGERSYDI+SRLLK+RI+F+ I D A +I AQLLFLEAENP+++I
Sbjct: 1 MSVIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LY+NSPGG V++G+AIYDTMQ+IKP + T C+GQA+SM +LLL+ G G R ALPN+RI
Sbjct: 61 YLYLNSPGGYVSSGLAIYDTMQYIKPDVRTLCLGQASSMAALLLAGGAAGKRSALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG +GQASDIE A++++K+K LN IY K+ GK+ E+++K +R+ M+A EA
Sbjct: 121 MMHQPMGGATGQASDIEIQAREVLKLKEILNSIYHKHTGKSVEQIQKDTERNFYMTAEEA 180
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 181 KNYGIIDTVI 190
>gi|238484703|ref|XP_002373590.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
flavus NRRL3357]
gi|317140707|ref|XP_001818368.2| ATP-dependent Clp protease proteolytic subunit [Aspergillus oryzae
RIB40]
gi|220701640|gb|EED57978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
flavus NRRL3357]
Length = 256
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 106/200 (53%), Positives = 150/200 (75%), Gaps = 4/200 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ M+ I AQLLFLEA+NPQK I LY
Sbjct: 46 TPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLY 105
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I P+ST C+GQAASMGSLLL G G R+ LP++ I++H
Sbjct: 106 INSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMIH 165
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQA+DI HA++I++++ +LN+IY ++ GK + +E+EK ++RD+ M A E
Sbjct: 166 QPSGGYFGQATDIAIHAKEILRVREQLNKIYKRHLTGKKELSLDEIEKLMERDYFMGAQE 225
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A + G+VD++L R+ +E+
Sbjct: 226 ALEMGIVDEILDRRVRSKEE 245
>gi|71892027|ref|YP_277757.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia pennsylvanicus str. BPEN]
gi|110816455|sp|Q493F8|CLPP_BLOPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71796133|gb|AAZ40884.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia pennsylvanicus str. BPEN]
Length = 208
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 112/200 (56%), Positives = 152/200 (76%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
K + +VP V+E T RG+R YDI+S LLKERI+F+TG IED +A LI AQ++FLE+
Sbjct: 8 KTPYCHRMVVVPTVIEHTIRGDRVYDIFSLLLKERIIFMTGTIEDSVANLIVAQMMFLES 67
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN +K+I LYINSPGGV+TAGM+IYDT+QF++P +STFCMGQAASM + LL++G KG RF
Sbjct: 68 ENSEKDIHLYINSPGGVITAGMSIYDTIQFVRPDVSTFCMGQAASMSAFLLASGTKGKRF 127
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LPNARI++HQP G F GQA+DI H ++I+KIK +N++ K+ G++ + + K +RD
Sbjct: 128 CLPNARIMIHQPLGSFQGQATDIAIHTREILKIKNNINKLMAKHTGQSIDIINKDTERDC 187
Query: 189 IMSASEACDWGVVDKVLMSR 208
+SA EA +G+VD VL R
Sbjct: 188 FLSADEAMKYGLVDCVLSQR 207
>gi|257784419|ref|YP_003179636.1| Endopeptidase Clp [Atopobium parvulum DSM 20469]
gi|257472926|gb|ACV51045.1| Endopeptidase Clp [Atopobium parvulum DSM 20469]
Length = 202
Score = 216 bits (549), Expect = 2e-54, Method: Composition-based stats.
Identities = 101/194 (52%), Positives = 138/194 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+P V+EQT RGERSYDIYSRLL +RIVF+ + A L+ AQLL LE+++P K+IS
Sbjct: 8 PTIPYVIEQTPRGERSYDIYSRLLNDRIVFLGEPVTRDSANLVIAQLLHLESQDPDKDIS 67
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+SPGG V AG+ I DTM FIKP +ST C+G AASM ++LL+AG KG R ALPN+ ++
Sbjct: 68 LYIDSPGGDVYAGLGILDTMNFIKPDVSTICVGMAASMSAVLLAAGAKGKRLALPNSMVM 127
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPS G GQ +DI+ A + I+ +NE+ G++ E+V +RD+ + A EAC
Sbjct: 128 IHQPSSGVQGQQTDIQIVADETKWIREHINELLSDYTGQSIEKVNVDTERDNYLRAQEAC 187
Query: 197 DWGVVDKVLMSRID 210
D+G+VD+V+ SR D
Sbjct: 188 DYGLVDRVISSRND 201
>gi|94968588|ref|YP_590636.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Koribacter versatilis Ellin345]
gi|116243126|sp|Q1IRD8|CLPP_ACIBL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|94550638|gb|ABF40562.1| ATP-dependent Clp protease proteolytic subunit ClpP [Candidatus
Koribacter versatilis Ellin345]
Length = 194
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 109/191 (57%), Positives = 156/191 (81%), Gaps = 1/191 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVPMV+EQT+RGER+YDIYSRLL++ I+F+ I+D++A LI AQ+LFLEAE+P+K+ISL
Sbjct: 2 LVPMVIEQTSRGERAYDIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLEAEDPEKDISL 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TAGMAIYDTMQFI+P ++T C+GQ ASMG+ LL++G G R+ALP +RIL+
Sbjct: 62 YINSPGGSITAGMAIYDTMQFIRPDVATICIGQCASMGATLLASGAPGKRYALPTSRILI 121
Query: 138 HQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP G SGQA+DI+ HA++I++++ N++ K+C + E+VEK ++RD IM+A +A
Sbjct: 122 HQPLMSGLSGQATDIDIHAREILRMREITNQLLAKHCNQRLEKVEKDVERDFIMNAQQAK 181
Query: 197 DWGVVDKVLMS 207
++G+VD ++
Sbjct: 182 EYGLVDDIIYK 192
>gi|219847585|ref|YP_002462018.1| Endopeptidase Clp [Chloroflexus aggregans DSM 9485]
gi|219541844|gb|ACL23582.1| Endopeptidase Clp [Chloroflexus aggregans DSM 9485]
Length = 195
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 92/190 (48%), Positives = 138/190 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP +VE+T+RGERS+DI+SRLLKER++ + I+D +A+ + AQLL L+ ++P+++I +Y
Sbjct: 6 VPTIVERTSRGERSWDIFSRLLKERVIIIGEPIDDELASSVVAQLLVLQQQDPERDIWMY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+ AG+AIYDTMQ + P + T C+G+AASM ++LL AG KG RFALP+A I H
Sbjct: 66 INSPGGVIRAGLAIYDTMQLVTPDVCTVCVGRAASMATVLLCAGAKGKRFALPHATIHSH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
GG G A D++ ++++++R L EI K+ G+T E +E RD M+AS+A ++
Sbjct: 126 PAGGGVEGYAPDVQIAVDEMLRLQRLLREIMAKHSGQTVERLEADFSRDFYMTASQAVEY 185
Query: 199 GVVDKVLMSR 208
G++D +L R
Sbjct: 186 GLIDAILTPR 195
>gi|310778378|ref|YP_003966711.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
gi|309747701|gb|ADO82363.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
Length = 199
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 102/194 (52%), Positives = 146/194 (75%), Gaps = 1/194 (0%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+E T RGER+YDIYSRLL++RI+F+ +I+D +A I AQLLFLEAE+ +K+I +YI
Sbjct: 4 PTVIENTGRGERAYDIYSRLLRDRIIFLGTEIDDRVANSIVAQLLFLEAEDAEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGV+T GMAIYDTM +IKP + T C+GQAASMG+LLL+AG G R++L N+RI++HQ
Sbjct: 64 NSPGGVITGGMAIYDTMNYIKPDVQTVCIGQAASMGALLLTAGTPGKRYSLENSRIMIHQ 123
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DI A++I+K+K ++I K G+ +++V + +RD M+ EA ++G
Sbjct: 124 PLGGARGQATDIAIQAKEILKMKELTSQIISKTTGQPFDKVMEDTERDKYMNPYEAKEYG 183
Query: 200 VVDKVLM-SRIDIE 212
+VD V +R + +
Sbjct: 184 LVDHVFKGTRGEEK 197
>gi|157413171|ref|YP_001484037.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526501|ref|ZP_05138553.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|157387746|gb|ABV50451.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9215]
gi|221537925|gb|EEE40378.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 195
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P+K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK +E +++ DRD MS EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDFETIKEDTDRDFYMSPKEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|24215259|ref|NP_712740.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
gi|45657293|ref|YP_001379.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|67460406|sp|Q8F352|CLPP_LEPIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460498|sp|Q72SG6|CLPP1_LEPIC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|24196349|gb|AAN49758.1| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
gi|45600531|gb|AAS70016.1| ATP-dependent Clp protease, proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
Length = 198
Score = 215 bits (548), Expect = 3e-54, Method: Composition-based stats.
Identities = 109/190 (57%), Positives = 152/190 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P V+EQT+RGERSYDI+SRLLK+RI+F+ I D A +I AQLLFLEAENP+++I
Sbjct: 1 MSVIPYVIEQTSRGERSYDIFSRLLKDRIIFLGNAINDDYANVITAQLLFLEAENPERDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LY+NSPGG V++G+AIYDTMQ+IKP + T C+GQA+SM +LLL+ G G R ALPNARI
Sbjct: 61 YLYLNSPGGYVSSGLAIYDTMQYIKPDVRTLCLGQASSMAALLLAGGAAGKRSALPNARI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG +GQASDIE A++++K+K LN IY K+ GKT E+++K +R+ M+A EA
Sbjct: 121 MMHQPMGGATGQASDIEIQAREVLKLKEILNSIYHKHTGKTVEQIQKDTERNFYMTADEA 180
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 181 KNYGIIDTVI 190
>gi|242822497|ref|XP_002487898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
stipitatus ATCC 10500]
gi|218712819|gb|EED12244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Talaromyces
stipitatus ATCC 10500]
Length = 262
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 103/202 (50%), Positives = 151/202 (74%), Gaps = 4/202 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ + I AQLLFLEA++P+K I LY
Sbjct: 54 TPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETTSASIVAQLLFLEADSPEKPIHLY 113
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P++T C+GQAASMGSLLL G G R+ LP++ I++H
Sbjct: 114 INSPGGSVTAGLAIYDTMTYIQSPVNTICVGQAASMGSLLLCGGHAGKRYCLPHSSIMIH 173
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LN+IY ++ GK + +E+EK ++RD+ M A E
Sbjct: 174 QPSGGYFGQASDIAIHAKEILRVRTQLNKIYQRHLTGKKQLSLDEIEKLMERDYFMGAQE 233
Query: 195 ACDWGVVDKVLMSRIDIEEKSK 216
A + G+VD++L R+ E +++
Sbjct: 234 ALEMGIVDEILDRRLKSENETE 255
>gi|332181312|gb|AEE17000.1| ATP-dependent Clp protease proteolytic subunit [Treponema
brennaborense DSM 12168]
Length = 204
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 146/198 (73%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVP V+EQT+ GERSYDI+SRLLK+RIVF+ G+I D A LI AQ+LFL+++N
Sbjct: 2 NEQMNNLVPYVIEQTSNGERSYDIFSRLLKDRIVFIDGEITDMTADLIVAQILFLDSQNS 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+ISLYINSPGG VTAG+AIYDT+Q +K T C+GQAASM ++LL+ G G R+ALP
Sbjct: 62 EKDISLYINSPGGSVTAGLAIYDTIQSVKCDTQTICVGQAASMAAILLAGGTAGKRYALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++R+++HQP GG GQASDI A++I+++K+ + + + GKT E V ++RD MS
Sbjct: 122 SSRVMIHQPWGGVQGQASDIAIQAKEIIRLKKLTIDYFASHTGKTAETVAADMERDLYMS 181
Query: 192 ASEACDWGVVDKVLMSRI 209
+ EA +G+VD+++ R
Sbjct: 182 SDEALAYGIVDQIMPRRT 199
>gi|256371559|ref|YP_003109383.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
gi|256008143|gb|ACU53710.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
Length = 204
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 100/202 (49%), Positives = 151/202 (74%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
LVP V+E ++RGER+YD+YSRLL+ERI+ + I+D +A L+C+Q+L+LE
Sbjct: 1 MDRPLAPRNYLVPTVIETSSRGERAYDLYSRLLRERIIILGTPIDDAVANLVCSQMLYLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
E+P ++I+LYINSPGG +TA AIYDTM+F++P +STFC GQAAS +++L+AG KG R
Sbjct: 61 YEDPDRDINLYINSPGGEITALFAIYDTMRFVRPDVSTFCFGQAASAAAVILAAGAKGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
FALP+ARILLHQP GG GQA+DIE A++I++++ LNE+ + G+ E + + DRD
Sbjct: 121 FALPHARILLHQPYGGVGGQATDIEIQAKEILRMRDLLNEMLAEATGQPVERIAQDTDRD 180
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
++ A +A ++G++D+V+++R
Sbjct: 181 FVLEAPQAVEYGLIDEVVVARE 202
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 199
Score = 215 bits (547), Expect = 4e-54, Method: Composition-based stats.
Identities = 102/198 (51%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL ERI+F+ ++ D +A I AQLL+L++E+
Sbjct: 1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK P+ T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK+ LN+I G+ E++EK DRD+ MS
Sbjct: 121 SRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA ++G++D+V+ R
Sbjct: 181 AEEAREYGLIDQVIAERP 198
>gi|282891306|ref|ZP_06299808.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498803|gb|EFB41120.1| hypothetical protein pah_c050o084 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 202
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 98/193 (50%), Positives = 144/193 (74%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
F L P V+E T RGERS DI+SRLL++RIVF+ I D +A ++ AQLLFL+ E+P+K+
Sbjct: 7 FNSLTPYVIEDTARGERSMDIFSRLLQDRIVFIGTDITDQVANIVVAQLLFLKMEDPKKD 66
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
+ LYINS GG +T+G+AIYDT++++ ++T+C+GQA+SMG+LLL AG KG RFALPN+R
Sbjct: 67 VHLYINSMGGYITSGLAIYDTLRWMTCDVNTYCIGQASSMGALLLMAGTKGKRFALPNSR 126
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPSGG G +SDI A++I+ +KR L+EI G++ E + +RD MS E
Sbjct: 127 IMIHQPSGGVGGTSSDIMLQAKEILVLKRSLHEIMAGATGQSVERIAADSERDFYMSPQE 186
Query: 195 ACDWGVVDKVLMS 207
A ++G++D+V+ +
Sbjct: 187 AKEYGIIDEVVTT 199
>gi|300870901|ref|YP_003785772.1| ATP-dependent Clp protease proteolytic subunit ClpP [Brachyspira
pilosicoli 95/1000]
gi|300688600|gb|ADK31271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brachyspira
pilosicoli 95/1000]
Length = 209
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 110/207 (53%), Positives = 159/207 (76%), Gaps = 1/207 (0%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+ KK E ++ +P V+EQT+RGERSYDIYSRLLK+RI+F+ G+I D +A ++ AQ
Sbjct: 4 FDRVDKKYIEKSYMT-IPYVIEQTSRGERSYDIYSRLLKDRIIFLGGEINDDVANVVIAQ 62
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLE+ +P+K+ISLYINSPGGVVTA + +YDTMQ++KP ++T C+GQAAS G+LLL+ G
Sbjct: 63 LLFLESADPEKDISLYINSPGGVVTAALGMYDTMQYVKPDVATLCVGQAASAGALLLAGG 122
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G RFA N+RI++HQPSGG G +D+E ++ +++K LN+I+VK+ G+ +++E
Sbjct: 123 ASGKRFATVNSRIMIHQPSGGSRGMVTDMEIQLRETIRLKAILNDIFVKHTGQELKKLEA 182
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD+ MSA EA ++G++DKV SR
Sbjct: 183 DMDRDYFMSAEEAKEYGIIDKVFSSRE 209
>gi|163848364|ref|YP_001636408.1| endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222526286|ref|YP_002570757.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl]
gi|163669653|gb|ABY36019.1| Endopeptidase Clp [Chloroflexus aurantiacus J-10-fl]
gi|222450165|gb|ACM54431.1| Endopeptidase Clp [Chloroflexus sp. Y-400-fl]
Length = 197
Score = 214 bits (546), Expect = 5e-54, Method: Composition-based stats.
Identities = 91/188 (48%), Positives = 135/188 (71%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP +VE+T+RGERS+DI+SRLLKER+V + I+D +A+ + AQLL L+ ++P+++I +Y
Sbjct: 6 VPTIVERTSRGERSWDIFSRLLKERVVLIGEPIDDELASSVIAQLLVLQQQDPERDIWMY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGV+ AG+AIYDTMQ + P I T C+G+AASM ++LL AG KG RFALP+A I H
Sbjct: 66 INSPGGVIRAGLAIYDTMQLVTPDICTVCVGRAASMATVLLCAGTKGKRFALPHATIHSH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
GG G A D++ ++++++R L EI K+ G+ E +E RD M+A +A ++
Sbjct: 126 PAGGGAEGYAPDVQIAVDEMLRLQRLLREIMAKHSGQPVERLEADFSRDFYMTAPQALEY 185
Query: 199 GVVDKVLM 206
G++D +L
Sbjct: 186 GLIDAILT 193
>gi|212546731|ref|XP_002153519.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium
marneffei ATCC 18224]
gi|210065039|gb|EEA19134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Penicillium
marneffei ATCC 18224]
Length = 257
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 105/201 (52%), Positives = 149/201 (74%), Gaps = 4/201 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ + I AQLLFLEA+NP+K I LY
Sbjct: 53 TPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETTSAAIVAQLLFLEADNPEKAIHLY 112
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P+ T C+GQAASMGSLLL G G R+ LP++ I++H
Sbjct: 113 INSPGGSVTAGLAIYDTMTYIQSPVHTICVGQAASMGSLLLCGGHAGKRYCLPHSSIMIH 172
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LN+IY ++ GK + +E+EK ++RD+ M A E
Sbjct: 173 QPSGGYFGQASDIAIHAKEILRVRTQLNQIYQRHLTGKKQLSLDEIEKLMERDYFMGAQE 232
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A + G+VD++L R+ E +S
Sbjct: 233 ALEMGIVDEILDRRMKPESES 253
>gi|148655690|ref|YP_001275895.1| endopeptidase Clp [Roseiflexus sp. RS-1]
gi|148567800|gb|ABQ89945.1| Endopeptidase Clp [Roseiflexus sp. RS-1]
Length = 203
Score = 214 bits (546), Expect = 6e-54, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 133/191 (69%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP +VE+T RGERS+D++SRLL+ERI+ + I+D +A+LI AQLL+L+ +P ++I Y
Sbjct: 6 VPTIVERTPRGERSWDLFSRLLQERIIMLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V G+AIYDTM+ I P + T C+G+A SM ++LL+ G +G R+ALP+A I H
Sbjct: 66 INSPGGSVRDGLAIYDTMKLISPDVCTVCVGRAGSMATILLAGGARGKRYALPHATIHFH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
GG G A D+ER +++++I+ N + ++ GKT EE+ + RD M+A EA ++
Sbjct: 126 PAGGGAEGYAPDMERIVKELLRIQELGNSLLARDTGKTVEEITRDFSRDRFMTAEEAREY 185
Query: 199 GVVDKVLMSRI 209
G +D +L S+
Sbjct: 186 GFIDAILESKK 196
>gi|227554886|ref|ZP_03984933.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis HH22]
gi|257081032|ref|ZP_05575393.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis E1Sol]
gi|227175979|gb|EEI56951.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis HH22]
gi|256989062|gb|EEU76364.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis E1Sol]
Length = 181
Score = 214 bits (545), Expect = 6e-54, Method: Composition-based stats.
Identities = 98/181 (54%), Positives = 140/181 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D++A + AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AI+DTM F+K + T +G AASMGS LL+AG+KG RFALPNA I
Sbjct: 61 YLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+ ++RLN I + G+ E +E+ DRD+ M+A +A
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMTAEQA 180
Query: 196 C 196
Sbjct: 181 K 181
>gi|322435045|ref|YP_004217257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium sp. MP5ACTX9]
gi|321162772|gb|ADW68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidobacterium sp. MP5ACTX9]
Length = 197
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 154/193 (79%), Gaps = 1/193 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+GL+P VVEQT+RGER+YDIYSRLL++ I+F+ I+D++A +I AQLLFL E+P+K+I
Sbjct: 1 MGLIPYVVEQTSRGERTYDIYSRLLRDNIIFMGTPIDDNVANVIIAQLLFLSGEDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAG+AIYDTMQ+IK + T C+GQAASMG+ LL AG++G RFALPN+RI
Sbjct: 61 QMYINSPGGSITAGLAIYDTMQYIKNDVMTLCIGQAASMGAFLLMAGKQGKRFALPNSRI 120
Query: 136 LLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
L+HQPS G SGQA+DI+ HA++I++I+ N + K+ G+ ++E+ ++RD IM+A +
Sbjct: 121 LIHQPSMGGLSGQATDIDIHAREILRIREITNTLMSKSTGQPLAQIERDVERDFIMTAPQ 180
Query: 195 ACDWGVVDKVLMS 207
A ++G++D ++
Sbjct: 181 AKEYGIIDDIIDR 193
>gi|160879125|ref|YP_001558093.1| endopeptidase Clp [Clostridium phytofermentans ISDg]
gi|160427791|gb|ABX41354.1| Endopeptidase Clp [Clostridium phytofermentans ISDg]
Length = 193
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 144/193 (74%), Gaps = 2/193 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP V+EQ +R ERSYDIYSRLLK+RI+F+ G++ A L+ AQLL+LEAE+ +K+I
Sbjct: 1 MSVVPYVIEQNDRSERSYDIYSRLLKDRIIFINGEVNHVSAGLVIAQLLYLEAEDSKKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG + G+AIYDTM+++K +ST C+G AASMGS LL+ G KG RFALPNA I
Sbjct: 61 RLYINSPGGSIPDGLAIYDTMRYLKCDVSTTCIGMAASMGSFLLAGGTKGKRFALPNAEI 120
Query: 136 LLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
L+HQPS QA+DI+ ++ I+ +RR+N+I +N GK ++EK DRD+ M+A
Sbjct: 121 LIHQPSGGIQAPAQATDIDIMSKHILNTRRRVNQILSENTGKEISQIEKDTDRDYYMTAE 180
Query: 194 EACDWGVVDKVLM 206
EA ++G++DK++
Sbjct: 181 EALNYGIIDKIIK 193
>gi|158335482|ref|YP_001516654.1| ATP-dependent Clp protease proteolytic subunit [Acaryochloris
marina MBIC11017]
gi|158305723|gb|ABW27340.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 198
Score = 214 bits (545), Expect = 7e-54, Method: Composition-based stats.
Identities = 101/197 (51%), Positives = 143/197 (72%), Gaps = 3/197 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPIGVPSVPYRIPGSPYERWVDIYTRLSQERIIFLGQEVTDGLANQIVAFLLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K IS+YINSPGG VTAG+AIYDTMQ IK ++T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPISIYINSPGGSVTAGLAIYDTMQHIKSEVATICVGLAASMGSFLLAAGSPGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQASDIE A++I++++R+LN+IY + E++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGARGQASDIEIEAKEIIRVRRQLNDIYAARTAQPLEKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSRI 209
EA ++G++D+V+ R
Sbjct: 181 HEALEYGLIDQVIEERP 197
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 214 bits (544), Expect = 8e-54, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 145/196 (73%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++++
Sbjct: 1 MPIGVPSVPYRLPGSTYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAYLLYLDSDDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VTAGMAI+DTMQ+IK + T C+GQAASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIFIYINSPGGSVTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG GQA+DI+ A++I++++++LNE+ K G+T E+++K DRD+ MSA
Sbjct: 121 ARIMIHQPLGGTRGQATDIQIEAKEILRVRQQLNEMLAKRTGQTLEKIQKDTDRDYFMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
+EA ++G++D+V+ R
Sbjct: 181 AEAKEYGLIDQVIEER 196
>gi|78779134|ref|YP_397246.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|115311341|sp|Q31BD5|CLPP1_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78712633|gb|ABB49810.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 195
Score = 214 bits (544), Expect = 9e-54, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK YE +++ DRD MS SEA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYETIKEDTDRDFYMSPSEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 147/198 (74%), Gaps = 5/198 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + DIY+RL +ERI+F+ +++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPKVPYRLP-GEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGMAIYDTMQ IK + T C+G AASMGS LL+AG KG R ALP
Sbjct: 60 GKDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQA+DIE A++I++++R+LNE+Y + G+ E++E+ +DRD MS
Sbjct: 120 HSRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMS 179
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA ++G++D+V+ R
Sbjct: 180 AEEAKNYGLIDRVIEERS 197
>gi|327462069|gb|EGF08398.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK1057]
Length = 196
Score = 213 bits (543), Expect = 1e-53, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGVAASMGTVIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ +++ + L +I +N GK+ E++ K +RD+ MSA E
Sbjct: 121 HQPMGGAGSGTQQTDMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMEN 192
>gi|289450649|ref|YP_003475569.1| endopeptidase Clp [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289185196|gb|ADC91621.1| endopeptidase Clp [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 194
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 103/193 (53%), Positives = 139/193 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMV+EQT RGERSYDIYSRLLKERI+ ++ ++ A+LI AQLLFLEAE+P K+I
Sbjct: 1 MSLVPMVIEQTGRGERSYDIYSRLLKERIIILSDEVNHVTASLITAQLLFLEAEDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG V+ G+ I DTM +IKP + T MG ASMG++LL++G KG RF LPNA +
Sbjct: 61 QFYINSPGGSVSDGLMILDTMDYIKPDVQTIGMGMCASMGAVLLTSGTKGKRFMLPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASD+ A+ + K ++ LN I + G++ E+E+ DRD+ SA EA
Sbjct: 121 MIHQPLGGMQGQASDMIIAAEHVTKTRQILNAILQRQTGRSLNEIERDTDRDNWKSAQEA 180
Query: 196 CDWGVVDKVLMSR 208
+G++D V+ R
Sbjct: 181 IAYGLIDHVMDKR 193
>gi|115384910|ref|XP_001209002.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus
NIH2624]
gi|114196694|gb|EAU38394.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus terreus
NIH2624]
Length = 258
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 109/198 (55%), Positives = 148/198 (74%), Gaps = 4/198 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ M+ I AQLLFLEA+NPQK I LY
Sbjct: 48 TPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLY 107
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I P+ST C+GQAASMGSLLL G G R+ LP++ I++H
Sbjct: 108 INSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMMH 167
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LN+IY ++ GK + EE+EK ++RD+ M A E
Sbjct: 168 QPSGGYFGQASDIAIHAKEILRVREQLNKIYKRHLTGKKEMSLEEIEKLMERDYFMGAKE 227
Query: 195 ACDWGVVDKVLMSRIDIE 212
A D G+VD+VL R+ +
Sbjct: 228 ALDMGIVDEVLDRRVKSK 245
>gi|162451419|ref|YP_001613786.1| endopeptidase Clp [Sorangium cellulosum 'So ce 56']
gi|161162001|emb|CAN93306.1| Endopeptidase Clp [Sorangium cellulosum 'So ce 56']
Length = 214
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 105/193 (54%), Positives = 151/193 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V E T+RGER ++I+SRLLK+RIVF+ +I+D +A + AQ LFLE+E+P+KEI +
Sbjct: 22 ILPTVTEVTHRGEREWNIFSRLLKDRIVFIGTEIDDFVANAVIAQFLFLESEDPEKEIQV 81
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGVVT+G+A+YDTMQ+++ P+ST C+GQAASMG++LL AG KG RFALP+AR+++
Sbjct: 82 YINSPGGVVTSGLAMYDTMQYVRCPVSTMCIGQAASMGAVLLGAGRKGRRFALPHARMMI 141
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I KIK L +I V GK +E+ K ++RD +SA++A +
Sbjct: 142 HQPLGGARGQATDIEIQAREIKKIKETLIDILVDATGKNRDELAKDIERDFYLSATQAKE 201
Query: 198 WGVVDKVLMSRID 210
+G++D+V R
Sbjct: 202 YGLIDEVFPKRNK 214
>gi|195118808|ref|XP_002003928.1| GI20379 [Drosophila mojavensis]
gi|193914503|gb|EDW13370.1| GI20379 [Drosophila mojavensis]
Length = 223
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 117/195 (60%), Positives = 153/195 (78%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT RGER+YDI+SRLLKERI+ + G I D +++ + AQLLFL++EN K I LYIN
Sbjct: 1 MVVEQTGRGERAYDIFSRLLKERIICLMGNITDDISSTVVAQLLFLQSENVNKPIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGGVVTAG+AIYDTMQ++KPPI+T+C+GQA SMGSLLL+AG GMR++LPNARI++HQP
Sbjct: 61 SPGGVVTAGLAIYDTMQYVKPPIATWCVGQACSMGSLLLAAGAPGMRYSLPNARIMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG GQA+DI HA++I+KIKR+L IYVK+ +Y+E+ ++RDH M+ EA G+
Sbjct: 121 SGGAQGQATDILIHAEEIIKIKRQLTNIYVKHAKNSYDEMCSRMERDHFMTPEEAKTLGI 180
Query: 201 VDKVLMSRIDIEEKS 215
+D VL + S
Sbjct: 181 IDHVLEHPPETVSDS 195
>gi|145233903|ref|XP_001400324.1| ATP-dependent Clp protease proteolytic subunit [Aspergillus niger
CBS 513.88]
gi|134057262|emb|CAK96425.1| unnamed protein product [Aspergillus niger]
Length = 251
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 109/195 (55%), Positives = 146/195 (74%), Gaps = 4/195 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ M+ I AQLLFLEA+NPQK I LY
Sbjct: 46 TPFVTETVGGGWHTYDIFSRLLKERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLY 105
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I P+ST C+GQAASMGSLLL G G RF LP++ I++H
Sbjct: 106 INSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLCGGHPGKRFCLPHSSIMMH 165
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LN+IY ++ GK T +E+EK ++RD+ M A E
Sbjct: 166 QPSGGYFGQASDIAIHAKEILRVRSQLNKIYKRHLTGKKEMTLDEIEKLMERDYFMGAKE 225
Query: 195 ACDWGVVDKVLMSRI 209
A D G+VD++L R
Sbjct: 226 ALDMGIVDEILDRRA 240
>gi|156743343|ref|YP_001433472.1| endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
gi|156234671|gb|ABU59454.1| Endopeptidase Clp [Roseiflexus castenholzii DSM 13941]
Length = 203
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 133/191 (69%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP +VE+T RGERS+D++SRLL+ERI+ + I+D +A+LI AQLL+L+ +P ++I Y
Sbjct: 6 VPTIVERTPRGERSWDLFSRLLQERIILLGTPIDDEVASLIVAQLLYLQHTDPDRDIWFY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V G+AIYDTM+ I P + T C+G+A SM ++LL+ G +G R+ALPNA I H
Sbjct: 66 INSPGGSVRDGLAIYDTMKLISPDVCTVCIGRAGSMATILLAGGARGKRYALPNATIHFH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
GG G A D+ER +++++I+ N + ++ G+T EE+ + RD M+A EA ++
Sbjct: 126 PAGGGAEGYAPDMERIVRELLRIQELGNSLLARDTGRTVEEITRDFSRDRFMTAQEAREY 185
Query: 199 GVVDKVLMSRI 209
G +D +L S+
Sbjct: 186 GFIDAILESKK 196
>gi|313617264|gb|EFR89730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
innocua FSL S4-378]
Length = 183
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 104/183 (56%), Positives = 140/183 (76%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + + DRD+ M+A EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEA 180
Query: 196 CDW 198
D+
Sbjct: 181 KDY 183
>gi|300813057|ref|ZP_07093435.1| Clp protease [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313123331|ref|YP_004033590.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|300495898|gb|EFK31042.1| Clp protease [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312279894|gb|ADQ60613.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 194
Score = 213 bits (542), Expect = 1e-53, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G++ D MA I AQLLFL+A++ K+I +
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEVNDQMANSIIAQLLFLDAQDNTKDIYM 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+GMAI DTM FIK P+ST G AASM S++L+ GEKG RFALP+A +L+
Sbjct: 62 YINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++I+ A++I+K ++ +NEI K+ G+ E +++ +RDH M+A EA D
Sbjct: 122 HQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIKRDTERDHYMTAQEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D +++++
Sbjct: 182 YGLIDDIMVNQNK 194
>gi|33861299|ref|NP_892860.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460516|sp|Q7V1W0|CLPP1_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33633876|emb|CAE19201.1| Clp protease subunit [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 196
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P+K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK E ++ DRD MS EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKERLNTELSERTGKELETIKGDTDRDFYMSPQEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|330921326|ref|XP_003299376.1| hypothetical protein PTT_10352 [Pyrenophora teres f. teres 0-1]
gi|311326959|gb|EFQ92512.1| hypothetical protein PTT_10352 [Pyrenophora teres f. teres 0-1]
Length = 248
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 109/216 (50%), Positives = 159/216 (73%), Gaps = 3/216 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+ ++ + L +P V E T G ++ DI+SRLL+ERI+ + G+++D M+ AQ
Sbjct: 32 FQPPGREAPRALSLP-IPYVTETTGGGWKTSDIFSRLLQERIICLNGEVDDFMSANAVAQ 90
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLEA+NP+K IS+YINSPGG V+AG+AIYDTM +IK P+ST CMG AASMGSLLL+ G
Sbjct: 91 LLFLEADNPEKPISMYINSPGGSVSAGLAIYDTMNYIKSPVSTICMGIAASMGSLLLAGG 150
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN--CGKTYEEV 180
+G R+ LP+AR+++HQPSGG+SG+ASDI HA++I++I+ +LN IY + +T EE+
Sbjct: 151 AEGQRYILPHARVMIHQPSGGYSGKASDIADHAKEILRIRDKLNRIYQSHLTTKRTLEEI 210
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
EK ++RD+ M A EA ++G+VDK+L R ++ +
Sbjct: 211 EKYMERDYYMDAQEAVEFGIVDKILEKRETSAKEEE 246
>gi|325684491|gb|EGD26655.1| ATP-dependent Clp protease, protease subunit [Lactobacillus
delbrueckii subsp. lactis DSM 20072]
Length = 205
Score = 213 bits (542), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 150/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G++ D MA I AQLLFL+A++ K+I +
Sbjct: 13 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGEVNDQMANSIIAQLLFLDAQDNTKDIYM 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+GMAI DTM FIK P+ST G AASM S++L+ GEKG RFALP+A +L+
Sbjct: 73 YINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVLI 132
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++I+ A++I+K ++ +NEI K+ G+ E +++ +RDH M+A EA D
Sbjct: 133 HQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIKRDTERDHYMTAQEAKD 192
Query: 198 WGVVDKVLMSRID 210
+G++D +++++
Sbjct: 193 YGLIDDIMVNQNK 205
>gi|331211899|ref|XP_003307219.1| ATP-dependent Clp protease proteolytic subunit 2 [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|309297622|gb|EFP74213.1| ATP-dependent Clp protease proteolytic subunit 2 [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 257
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 114/208 (54%), Positives = 150/208 (72%), Gaps = 9/208 (4%)
Query: 16 LGLVPMVVEQTNRG-ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
GLVPMV+E+ RG ER++DI+SRLL+ER++FV G+I D A LI AQLL+LEAE+P
Sbjct: 51 SGLVPMVIEREGRGGERAFDIFSRLLRERVIFVGGEINDADANLIVAQLLYLEAESPD-P 109
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG+AIYDTMQ+++ P+ T C+GQA SMGS+LL AG KG R ALPN+
Sbjct: 110 IELYINSPGGSVTAGLAIYDTMQYVRSPVHTICIGQACSMGSILLGAGAKGFRKALPNST 169
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE-------EVEKTLDRD 187
I++HQPSGG SGQASD+ A +I+++K+RL EIY K+CGK E E+ L+RD
Sbjct: 170 IMIHQPSGGSSGQASDMAIRANEILRLKKRLIEIYAKHCGKEDESQTDRCNRFEQALERD 229
Query: 188 HIMSASEACDWGVVDKVLMSRIDIEEKS 215
M A +G++D+V+ SR +
Sbjct: 230 KFMDGESAQAFGIIDQVVASRSSKPNDN 257
>gi|324991352|gb|EGC23285.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK353]
gi|325690651|gb|EGD32652.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK115]
gi|325694980|gb|EGD36884.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK150]
Length = 196
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ +++ + L +I +N GK+ E++ K +RD+ MSA E
Sbjct: 121 HQPMGGAGSGTQQTDMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMEN 192
>gi|323351064|ref|ZP_08086721.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis VMC66]
gi|322122788|gb|EFX94497.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis VMC66]
gi|324993705|gb|EGC25624.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK405]
gi|324994982|gb|EGC26895.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK678]
gi|325687068|gb|EGD29091.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK72]
gi|325696303|gb|EGD38194.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK160]
gi|327462975|gb|EGF09296.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK1]
gi|327470480|gb|EGF15936.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK330]
gi|327474578|gb|EGF19983.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK408]
gi|327490136|gb|EGF21924.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK1058]
gi|328946905|gb|EGG41042.1| ATP-dependent Clp protease, protease subunit [Streptococcus
sanguinis SK1087]
Length = 196
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ +++ + L +I +N GK+ E++ K +RD+ MSA E
Sbjct: 121 HQPMGGAGSGTQQTDMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMEN 192
>gi|316967772|gb|EFV52155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Trichinella
spiralis]
Length = 892
Score = 212 bits (541), Expect = 2e-53, Method: Composition-based stats.
Identities = 102/193 (52%), Positives = 151/193 (78%), Gaps = 2/193 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+VVEQT RGER+YDI+SRLL+ERI+ V G I D +++L+ AQLLFL++++ K +
Sbjct: 18 VPYIPIVVEQTGRGERAYDIFSRLLEERIICVMGPITDELSSLVIAQLLFLQSKSLTKPV 77
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPP--ISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+YINSPGG VTAG+ IYDTMQ+IKP I+T+C+GQA SM SLLL++G +G R LPNA
Sbjct: 78 HMYINSPGGSVTAGLGIYDTMQYIKPRILIATWCIGQACSMASLLLASGTEGYRNCLPNA 137
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
R+++HQPSG GQA+DI A++I+K+KR++N++YVK+ K Y +E+ ++RD MS
Sbjct: 138 RVMIHQPSGQAVGQATDIMIQAEEIIKLKRQINKLYVKHTKKPYNVIEEAMERDLFMSPE 197
Query: 194 EACDWGVVDKVLM 206
+A ++G++DK++
Sbjct: 198 DAAEFGLIDKIVN 210
>gi|104773729|ref|YP_618709.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
gi|116243144|sp|Q1GB31|CLPP_LACDA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|103422810|emb|CAI97454.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC 11842]
Length = 194
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 149/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G + D MA I AQLLFL+A++ K+I +
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGDVNDQMANSIIAQLLFLDAQDNTKDIYM 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+GMAI DTM FIK P+ST G AASM S++L+ GEKG RFALP+A +L+
Sbjct: 62 YINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++I+ A++I+K ++ +NEI K+ G+ E +++ +RDH M+A EA D
Sbjct: 122 HQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIKRDTERDHYMTAQEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D +++++
Sbjct: 182 YGLIDNIMVNQNK 194
>gi|183220373|ref|YP_001838369.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189910487|ref|YP_001962042.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Ames)']
gi|167775163|gb|ABZ93464.1| Protease subunit of endopeptidase Clp [Leptospira biflexa serovar
Patoc strain 'Patoc 1 (Ames)']
gi|167778795|gb|ABZ97093.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Leptospira biflexa serovar Patoc strain 'Patoc 1
(Paris)']
Length = 200
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 105/196 (53%), Positives = 143/196 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V EQT+RG D+YSRLL++RI+F+ I+D A +CAQLLFLEAENP ++
Sbjct: 1 MSTLLPYVSEQTSRGIDRMDVYSRLLRDRIIFLGAGIDDTYANAVCAQLLFLEAENPDRD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG V++G+AIYDTMQ IKP + T C+GQA+SM +LLL+ G KG R ALPN R
Sbjct: 61 IYLYINSPGGYVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPNGR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDIE A++I+K K L ++Y K+ GK +++K +R+ MSA E
Sbjct: 121 IMMHQPYGGAGGQASDIEISAKEIIKTKNTLIDLYCKHIGKPAAQIQKDTERNFFMSAEE 180
Query: 195 ACDWGVVDKVLMSRID 210
A ++G++D V++ R
Sbjct: 181 AKEYGIIDNVILERKQ 196
>gi|123966075|ref|YP_001011156.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200441|gb|ABM72049.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9515]
Length = 196
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P+K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK E +++ DRD MS EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILYLKERLNSELSERTGKNLETIKEDTDRDFYMSPLEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|301060520|ref|ZP_07201360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [delta
proteobacterium NaphS2]
gi|300445363|gb|EFK09288.1| ATP-dependent Clp protease, proteolytic subunit ClpP [delta
proteobacterium NaphS2]
Length = 202
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 106/192 (55%), Positives = 153/192 (79%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMV+EQ++RGER+YDIYSRLLK+RI+F+T Q+ D MA + AQ+LFLE+E+P+K+I +
Sbjct: 2 LIPMVIEQSSRGERAYDIYSRLLKDRIIFITDQVADPMANTVIAQMLFLESEDPEKDIHM 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTMQ+IKP ++T CMGQ +SM +LLL+AG K R+ALP++RI++
Sbjct: 62 YINSPGGSVTAGLAIYDTMQYIKPDVATICMGQTSSMAALLLAAGAKEKRYALPHSRIMI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DI+ HA++I+KI+ LN+I ++ G + + K +RD M + +A D
Sbjct: 122 HQPLGGAQGQATDIDIHAREILKIRDNLNQILAEHTGTDIKRIRKDTERDFFMDSQQAKD 181
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ R
Sbjct: 182 YGIIDRVIHKRE 193
>gi|125718530|ref|YP_001035663.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
sanguinis SK36]
gi|166214716|sp|A3CPK8|CLPP_STRSV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125498447|gb|ABN45113.1| ATP-dependent Clp protease, proteolytic subunit, putative
[Streptococcus sanguinis SK36]
Length = 196
Score = 212 bits (540), Expect = 2e-53, Method: Composition-based stats.
Identities = 95/192 (49%), Positives = 139/192 (72%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGVAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ +++ + L +I +N GK+ E++ K +RD+ MSA E
Sbjct: 121 HQPMGGAGSGTQQTDMAIVAEHLLRTRNTLEKILAENSGKSVEQIHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMEN 192
>gi|254453571|ref|ZP_05067008.1| Clp protease [Octadecabacter antarcticus 238]
gi|198267977|gb|EDY92247.1| Clp protease [Octadecabacter antarcticus 238]
Length = 195
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 114/194 (58%), Positives = 150/194 (77%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQT RGER+YDI+SRLLKERI+FV G I M+ LI AQLL LEAENP+KEIS+YIN
Sbjct: 1 MVVEQTARGERAYDIFSRLLKERIIFVNGPIHSGMSHLIVAQLLHLEAENPKKEISMYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAG++IYDTMQ+IKP +ST G AASMGS++ GEKGMRFALPNA +++HQP
Sbjct: 61 SPGGEVTAGLSIYDTMQYIKPKVSTLICGMAASMGSVIAIGGEKGMRFALPNAEVMIHQP 120
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
SGG G+A DI A+ I + + R+ ++YVK+ G++ + V+K LDRD M+ EA +WG
Sbjct: 121 SGGSQGKAEDILISARHIERTRERMYQLYVKHSGQSLKTVQKALDRDLWMTPLEAKEWGH 180
Query: 201 VDKVLMSRIDIEEK 214
+D+++ +R ++K
Sbjct: 181 LDEIVENRAKEDDK 194
>gi|123968338|ref|YP_001009196.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|123198448|gb|ABM70089.1| Clp protease subunit [Prochlorococcus marinus str. AS9601]
Length = 195
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG KG R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK Y+ +++ DRD MS +EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYDTIKEDTDRDFYMSPNEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|116513727|ref|YP_812633.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|122275503|sp|Q04BH7|CLPP_LACDB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116093042|gb|ABJ58195.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactobacillus
delbrueckii subsp. bulgaricus ATCC BAA-365]
gi|325125381|gb|ADY84711.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus 2038]
Length = 194
Score = 212 bits (539), Expect = 3e-53, Method: Composition-based stats.
Identities = 104/193 (53%), Positives = 149/193 (77%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQT RGER+YDIYSRLLK+RI+ ++G + D MA I AQLLFL+A++ K+I +
Sbjct: 2 LVPTVIEQTARGERAYDIYSRLLKDRIIMLSGDVNDQMANSIIAQLLFLDAQDNTKDIYM 61
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGGV+T+GMAI DTM FIK P+ST G AASM S++L+ GEKG RFALP+A +L+
Sbjct: 62 YINSPGGVITSGMAIVDTMNFIKSPVSTIATGMAASMASIILAEGEKGKRFALPHATVLI 121
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA++I+ A++I+K ++ +NEI K+ G+ E +++ +RDH M+A EA D
Sbjct: 122 HQPLGGAQGQATEIQIAAEEILKTRKMINEILAKDSGQDIETIKRDTERDHYMTAQEAKD 181
Query: 198 WGVVDKVLMSRID 210
+G++D +++++
Sbjct: 182 YGLIDDIMVNQNK 194
>gi|296807623|ref|XP_002844228.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae
CBS 113480]
gi|238843711|gb|EEQ33373.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma otae
CBS 113480]
Length = 238
Score = 212 bits (539), Expect = 4e-53, Method: Composition-based stats.
Identities = 109/199 (54%), Positives = 151/199 (75%), Gaps = 3/199 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERIV + G++++ ++ I AQLLFLEA+NP+K I LY
Sbjct: 37 TPFVTETVGGGWHTYDIFSRLLKERIVCLNGEVDESLSAAIVAQLLFLEADNPEKPIQLY 96
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P+ST C+GQAASMGSLLL GE G R+ LP++ I++H
Sbjct: 97 INSPGGSVTAGLAIYDTMTYIQSPVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSIMIH 156
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEA 195
QPSGG+ GQA+DI HA++I++++ +LN+IY ++ GK T EE+EK ++RD+ M A EA
Sbjct: 157 QPSGGYFGQATDIAIHAKEILRVRHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEA 216
Query: 196 CDWGVVDKVLMSRIDIEEK 214
+ G+VD +L RI +E+
Sbjct: 217 LEMGIVDSILDRRIPPKEE 235
>gi|121705182|ref|XP_001270854.1| Clp protease, putative [Aspergillus clavatus NRRL 1]
gi|119399000|gb|EAW09428.1| Clp protease, putative [Aspergillus clavatus NRRL 1]
Length = 256
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 106/196 (54%), Positives = 147/196 (75%), Gaps = 4/196 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERI+ + G++++ M+ I AQLLFLEA+NPQK I LY
Sbjct: 46 TPFVAETVGGGWHTYDIFSRLLKERIICLNGEVDESMSASIVAQLLFLEADNPQKPIHLY 105
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I P+ST C+GQAASMGSLLL G G R+ LP++ I++H
Sbjct: 106 INSPGGSVTAGLAIYDTMTYITSPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMIH 165
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CG---KTYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LN+IY ++ G + EE+EK ++RD+ M A+E
Sbjct: 166 QPSGGYFGQASDIAIHAKEILRVRSQLNKIYKRHLTGNKELSLEEIEKLMERDYFMGANE 225
Query: 195 ACDWGVVDKVLMSRID 210
A + G+VD++L R+
Sbjct: 226 ALEMGIVDEILDRRVK 241
>gi|33519711|ref|NP_878543.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia floridanus]
gi|60389741|sp|Q7VRH1|CLPP_BLOFL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33504056|emb|CAD83317.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Blochmannia floridanus]
Length = 209
Score = 211 bits (538), Expect = 4e-53, Method: Composition-based stats.
Identities = 110/208 (52%), Positives = 156/208 (75%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ + + ++P VV+QT+RG+R+YDI+S LLKERI+FV G+IE+ MA LI
Sbjct: 1 MSYLYDSYFQYIHYNVSMIPTVVKQTSRGDRAYDIFSLLLKERIIFVIGKIENFMANLIV 60
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ++FLE+E+P K+I LYINSPGG VTAGM+IYD MQF+KP IST+C+GQAASMG+ LL+
Sbjct: 61 AQIMFLESEDPVKDIHLYINSPGGEVTAGMSIYDIMQFVKPNISTYCIGQAASMGAFLLA 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G RF LPN+R+++HQP G GQA+DI HA +I+K+K +N++ K+ GK+ + +
Sbjct: 121 AGTTGKRFCLPNSRVMIHQPLGSLHGQATDIAIHATEILKVKENINKLMAKHTGKSIDVI 180
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
+ ++RD +SA E+ +G+VD VL R
Sbjct: 181 RQDMERDCFLSADESVKYGLVDSVLSKR 208
>gi|297563813|ref|YP_003682786.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848262|gb|ADH70280.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 207
Score = 211 bits (538), Expect = 5e-53, Method: Composition-based stats.
Identities = 92/191 (48%), Positives = 139/191 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VPMVVE+T GERS+D++SRLL ERI+F+ I+D +A ++ AQ+L L+ E+ + +I LY
Sbjct: 7 VPMVVERTPHGERSFDVFSRLLSERIIFLGTPIDDDVANVVMAQMLHLDYESSETDIQLY 66
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA AIYDTM+F++ ++T CMGQAAS ++LL+AG G R AL +AR+LLH
Sbjct: 67 INSPGGSNTALTAIYDTMRFVRADVATVCMGQAASAAAVLLAAGTAGKRTALEHARVLLH 126
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSG G A+D+E A++I++++ ++ EI ++ G+T E + DRD I +A +A ++
Sbjct: 127 QPSGEGQGVAADLEIQAEEILRVRSQVEEILARHTGQTQERLRADTDRDKIFTAQQAKEY 186
Query: 199 GVVDKVLMSRI 209
G+VD ++ +R
Sbjct: 187 GLVDGIITTRQ 197
>gi|289641547|ref|ZP_06473709.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
gi|289508642|gb|EFD29579.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
Length = 223
Score = 211 bits (537), Expect = 5e-53, Method: Composition-based stats.
Identities = 101/209 (48%), Positives = 153/209 (73%), Gaps = 2/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++ +G + + ++P V+E+T+RGE + D Y +LL+ERI+F+ QI+D A +
Sbjct: 5 ITGQGDTSRQPVSRY--VLPRVIERTSRGEIALDPYEKLLRERIIFLGVQIDDTSANDVM 62
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+E+P ++IS+YINSPGG TA AIYDTMQF++P I T CMGQAAS S+LL+
Sbjct: 63 AQLLFLESEDPDRDISIYINSPGGSFTALTAIYDTMQFVRPDIQTICMGQAASAASVLLA 122
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G RF L N+RILLHQPSG GQ+SD+E A++I++++ L IY ++ G++ EE+
Sbjct: 123 AGTPGKRFGLENSRILLHQPSGQGEGQSSDLEIQAREILRMRALLERIYARHTGRSEEEI 182
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ ++RD I+SA+EA ++G++D+V+ +R
Sbjct: 183 RRDIERDKILSAAEAKEYGLIDEVISTRK 211
>gi|172036826|ref|YP_001803327.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|171698280|gb|ACB51261.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
Length = 199
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVNDAIANRIVALLLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QASDIE A +I++I+ +LN+I CG++ E++EK DRD+ MS
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNQILADKCGQSLEKIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA ++G++DKV+ R
Sbjct: 181 AEEAKEYGLIDKVIEERS 198
>gi|295105645|emb|CBL03189.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Faecalibacterium prausnitzii SL3/3]
Length = 198
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 99/198 (50%), Positives = 148/198 (74%), Gaps = 5/198 (2%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP VVEQ+ GERSYDI+SRLL +RI+ ++ + D A+L+ AQLL+LE ++P K+I
Sbjct: 1 MSFVPYVVEQSAHGERSYDIFSRLLNDRIIVLSEDVNDTTASLVVAQLLYLEGQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG ++AGMAI+DTMQ+IK +ST CMG AASMG+ LL++G KG RFALPNA I
Sbjct: 61 SLYINSPGGSISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLASGTKGKRFALPNAEI 120
Query: 136 LLHQP-----SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
++HQP GG SGQ +DI+ HA+ +V I+ ++N + + G+ E++++ +RD+ +
Sbjct: 121 MIHQPLIGGQGGGLSGQTTDIKIHAEHMVYIRDKMNRMLSEYTGQPLEKIQQDTERDNYL 180
Query: 191 SASEACDWGVVDKVLMSR 208
+A +A ++G++D+V+ R
Sbjct: 181 TAQQAKEYGLIDEVIAHR 198
>gi|240849147|ref|NP_001155481.1| putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Acyrthosiphon pisum]
gi|239792011|dbj|BAH72394.1| ACYPI002586 [Acyrthosiphon pisum]
Length = 224
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 107/186 (57%), Positives = 149/186 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+VVEQT RGERSYDI+SRLLKERI+ V G+I DH+A+L+ AQLLFL+ EN + I++Y
Sbjct: 33 IPIVVEQTGRGERSYDIFSRLLKERIICVMGEINDHVASLVIAQLLFLQFENQKATINMY 92
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+ IYDTM +IKP +ST+C+GQA SMGS+LL+AG KG R ALP++RI++H
Sbjct: 93 INSPGGSVTAGLGIYDTMMYIKPDVSTWCIGQACSMGSVLLAAGAKGKRHALPHSRIMIH 152
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G+ASD++ +I+++K L +IY K+ G ++++ +++ DH MSA EA +
Sbjct: 153 QPSGGMQGKASDMKIVTDEILRLKSSLIDIYGKHTGMPADKIDASMESDHFMSADEAVTF 212
Query: 199 GVVDKV 204
G++DKV
Sbjct: 213 GLIDKV 218
>gi|309791159|ref|ZP_07685691.1| endopeptidase Clp [Oscillochloris trichoides DG6]
gi|308226721|gb|EFO80417.1| endopeptidase Clp [Oscillochloris trichoides DG6]
Length = 198
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 134/191 (70%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P ++E+T RGERS+DI+SRLL+ER++ + I+D MA ++ AQLL L+ ++P+++I LY
Sbjct: 6 IPTIIERTARGERSWDIFSRLLQERVIMIGTPIDDDMAAVVVAQLLVLQHQDPERDIWLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGGVV AG+AIYDTMQ I P + T C+G+AASM ++LL G KG RFALPNA I H
Sbjct: 66 INSPGGVVRAGLAIYDTMQLISPDVCTVCVGRAASMATVLLCGGAKGKRFALPNATIHSH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
GG G A D+E ++++++R L EI ++ G+ E +E+ RD ++A +A ++
Sbjct: 126 PAGGGAEGYAPDVEIAVNEMLRLQRMLREIMAEHSGQPIERIEQDFSRDAYLTAQQAIEY 185
Query: 199 GVVDKVLMSRI 209
G++D +L
Sbjct: 186 GLIDSILEPNS 196
>gi|320102926|ref|YP_004178517.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
gi|319750208|gb|ADV61968.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
Length = 209
Score = 211 bits (537), Expect = 6e-53, Method: Composition-based stats.
Identities = 85/199 (42%), Positives = 140/199 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP+V+E+ R ER+ DIYSRLL++RI+ ++ ++D A LI AQLL L ++ + EI
Sbjct: 1 MPMVPIVIERGGREERAMDIYSRLLQDRIIMLSSILDDVTANLIVAQLLVLAHQDAKAEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLY+NSPGG +T MA+YDTMQFI P++T+C+G AAS ++LL+ G KG R ALP+++I
Sbjct: 61 SLYLNSPGGSLTGTMAVYDTMQFIGCPVATYCIGMAASGAAILLAGGTKGRRHALPHSKI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+LHQP G GQ SDI A ++++ K + ++ + G++ +++E + RD +SA EA
Sbjct: 121 MLHQPYGHVGGQVSDISIQAAEVLRNKAVVEKVLARRTGRSEKQIESEIKRDRYLSAPEA 180
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++D ++ + +I++
Sbjct: 181 LEFGLIDHIVEDKSEIKDA 199
>gi|189200839|ref|XP_001936756.1| ATP-dependent Clp protease proteolytic subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983855|gb|EDU49343.1| ATP-dependent Clp protease proteolytic subunit 1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 244
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 107/216 (49%), Positives = 158/216 (73%), Gaps = 3/216 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F+ ++ + L +P V E T G ++ DI+SRLL+ERI+ + G+++D M+ AQ
Sbjct: 28 FQPPDREAPRALSLP-IPYVTETTGGGWKTSDIFSRLLQERIICLNGEVDDFMSANAVAQ 86
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLEA+NP+K IS+YINSPGG V+AG+AIYDTM +IK P+ST CMG AASMGSLLL+ G
Sbjct: 87 LLFLEADNPEKPISMYINSPGGSVSAGLAIYDTMNYIKSPVSTICMGIAASMGSLLLAGG 146
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN--CGKTYEEV 180
+G R+ LP+AR+++HQPSGG+ G+ASDI HA++I++I+ +LN IY + ++ EE+
Sbjct: 147 AEGQRYILPHARVMIHQPSGGYRGKASDIADHAKEILRIRDKLNRIYQSHLTTKRSLEEI 206
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
EK ++RD+ M A EA ++G+VDK+L R ++ +
Sbjct: 207 EKYMERDYYMDAQEAVEFGIVDKILEKREISAKEDE 242
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 96/196 (48%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + ER DIY+RL +ERI+F+ ++ D +A I A +L+L++++P
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTMQ+IK + T C+G AASMGS LL+AG KG R ALPN
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKGKRLALPN 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA+DIE A +I++++ LN + + G++ E++EK DRD+ MSA
Sbjct: 121 SRIMIHQPMGGTRGQATDIEIEANEILRVRSELNNMLAERTGQSLEKIEKDTDRDYYMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++D+V+ R
Sbjct: 181 EEAKEYGLIDQVIEER 196
>gi|328767510|gb|EGF77559.1| hypothetical protein BATDEDRAFT_91564 [Batrachochytrium
dendrobatidis JAM81]
Length = 251
Score = 211 bits (536), Expect = 8e-53, Method: Composition-based stats.
Identities = 112/200 (56%), Positives = 148/200 (74%), Gaps = 11/200 (5%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E + RGER +DI+SRLLKERIV + G+++D ++ +I AQLLFLEAENP+K IS Y
Sbjct: 21 IPYVIESSARGERVFDIFSRLLKERIVMLNGEVDDSVSAIIVAQLLFLEAENPEKPISFY 80
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYDT +I+ P++T CMGQA SMGSLLL+AGE G R LPNAR+++H
Sbjct: 81 INSPGGSVTAGMAIYDT--YIQSPVATVCMGQACSMGSLLLTAGEPGHRSILPNARVMIH 138
Query: 139 QPSG---------GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
QP G SGQASDI HA++I+ I+ RLN+IYV + ++ + + ++RDH
Sbjct: 139 QPRQAIIVYTTFGGASGQASDIAIHAKEILDIRERLNQIYVHHTHQSLDVIVNRMERDHF 198
Query: 190 MSASEACDWGVVDKVLMSRI 209
MSA +A +G+VDKVL R
Sbjct: 199 MSAEQALTFGLVDKVLEKRP 218
>gi|126696140|ref|YP_001091026.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|126543183|gb|ABO17425.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9301]
Length = 195
Score = 210 bits (535), Expect = 9e-53, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 137/192 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+E++ ER +DIYSRLL+ERI+F+ Q+ A I AQLLFLEAE+P+K+I +
Sbjct: 1 MIPLVLEESGGSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V G+ I+DTMQ +KP I T C+G AASMG+ LL+AG +G R +L ++RI++
Sbjct: 61 YINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTQGKRSSLRHSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDI A +I+ +K RLN + GK Y+ +++ DRD MS +EA +
Sbjct: 121 HQPLGGARGQASDIRIQADEILFLKERLNTELSERTGKDYDTIKEDTDRDFYMSPNEAVE 180
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 181 YGLIDLVLDKKP 192
>gi|65320084|ref|ZP_00393043.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
Length = 186
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 100/184 (54%), Positives = 131/184 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RIV + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIVIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA++IE A+ I+K+K +N++ + G+ E V +RD+ M+A A
Sbjct: 121 MIHQPLGGAQGQATEIEITAKRILKLKHDINKMIAEKTGQPIERVAHDTERDYFMTAERA 180
Query: 196 CDWG 199
+G
Sbjct: 181 KAYG 184
>gi|261366992|ref|ZP_05979875.1| Clp protease [Subdoligranulum variabile DSM 15176]
gi|282571110|gb|EFB76645.1| Clp protease [Subdoligranulum variabile DSM 15176]
Length = 196
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 96/195 (49%), Positives = 143/195 (73%), Gaps = 3/195 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+EQT RGERSYDI+SRLL +RI+ ++ + A+++ AQLL+LE ++P+K+I
Sbjct: 1 MSLVPYVIEQTARGERSYDIFSRLLNDRIIVLSEDVNSTSASVVVAQLLYLEGQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
YINSPGG ++ GMAI+DTM +IK +ST C+G AASMGS LL++G KG RFALPN+ I
Sbjct: 61 YFYINSPGGSISDGMAIHDTMNYIKCDVSTICIGMAASMGSFLLASGTKGKRFALPNSEI 120
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
L+HQP SGQA+DI+ HA I+ I+ R+N++Y + G+ E +++ +RD+ M+A
Sbjct: 121 LIHQPLISGGGISGQATDIQIHANHIIHIRERMNQLYSQYTGQALETIQRDTERDNYMTA 180
Query: 193 SEACDWGVVDKVLMS 207
+A ++G++D +L
Sbjct: 181 QQAKEYGLIDDILYK 195
>gi|220906939|ref|YP_002482250.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7425]
gi|219863550|gb|ACL43889.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 198
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 145/198 (73%), Gaps = 5/198 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + DIY+RL +ERI+F+ +++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPKVPYRMP-GEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYINSPGG VTAGMAIYDTMQ IK + T C+G AASMGS LL+AG G R ALP
Sbjct: 60 GKDIVLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGAPGKRLALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQPSGG GQASDIE A++I++I+ +LN+IY G+ E++EK +DRD+ MS
Sbjct: 120 HSRIMIHQPSGGTRGQASDIEIEAREIIRIRHQLNQIYADRTGQPLEKIEKDIDRDYFMS 179
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA D+G++D+V+ R
Sbjct: 180 AQEAKDYGLIDRVIEDRT 197
>gi|325187857|emb|CCA22400.1| ATPdependent Clp protease proteolytic subunit putati [Albugo
laibachii Nc14]
Length = 250
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 105/200 (52%), Positives = 152/200 (76%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
F +P+V+E+++ GER+YDIYSRLLKERI+FV G I+D +++L+ AQLL+LE+E
Sbjct: 44 KHFSRFSSYIPIVLEKSHSGERAYDIYSRLLKERIIFVQGPIDDTLSSLVTAQLLYLESE 103
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
P K+I +YINSPGG+VT+G+AI+DTMQ+I P + T C+GQAASM +LLL+ G G R+A
Sbjct: 104 QPDKDIYMYINSPGGIVTSGLAIFDTMQYIHPNVRTLCLGQAASMAALLLAGGAPGHRYA 163
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN+RI++HQPSGG G ASDI HA++I+K++ RLN++Y + GK+ +EK +DRD
Sbjct: 164 LPNSRIMIHQPSGGTRGMASDIAIHAEEIIKLRHRLNKLYSSHTGKSISTIEKAMDRDLF 223
Query: 190 MSASEACDWGVVDKVLMSRI 209
M EA ++G++D ++ R
Sbjct: 224 MDPEEAVNFGIIDSIMRERK 243
>gi|159900345|ref|YP_001546592.1| endopeptidase Clp [Herpetosiphon aurantiacus ATCC 23779]
gi|159893384|gb|ABX06464.1| Endopeptidase Clp [Herpetosiphon aurantiacus ATCC 23779]
Length = 218
Score = 210 bits (534), Expect = 1e-52, Method: Composition-based stats.
Identities = 83/190 (43%), Positives = 132/190 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VVE ++RGER YDIYSRLLKERI+ + I+ +A ++ AQLLFL+ ++P ++IS+
Sbjct: 22 VVPYVVETSSRGERVYDIYSRLLKERIIILGTPIDSQIANVLVAQLLFLQHDDPDRDISI 81
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+AIYDTMQ + P I+T+C+G A SM + +L+ G KG R++LPN+ I +
Sbjct: 82 YINSPGGEVNAGLAIYDTMQMVSPDIATWCVGFAGSMATPVLAGGTKGKRYSLPNSTIHM 141
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
H GG G A D+E +++++++ + + K+ G+ E + + DRD M+ +A +
Sbjct: 142 HPAGGGARGYAPDVEIQIKELLRLQNIVRGLLAKDTGQPIERIARDFDRDLFMTPEQAKE 201
Query: 198 WGVVDKVLMS 207
+G++D++
Sbjct: 202 YGIIDEITTH 211
>gi|223996651|ref|XP_002287999.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220977115|gb|EED95442.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 191
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 150/191 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP+V+E GER++DIYSRLL+ERI+ V G++ D MA+L+ AQLLFLEAE P+K + +
Sbjct: 1 LVPVVLESGTTGERAFDIYSRLLRERIICVHGEVTDSMASLVTAQLLFLEAEAPEKPVYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG+VTAGMA+YDTMQ+I P + T CMGQAASMGSLLL+ G G RFALPNARI+L
Sbjct: 61 YINSPGGLVTAGMAMYDTMQYIHPEVHTICMGQAASMGSLLLAGGSAGCRFALPNARIML 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG G ASDI+ A++I++ + LN++YV + G+ EE+E+ +DRD M +A D
Sbjct: 121 HQPSGGAQGMASDIDIQAREILRTRANLNQLYVHHTGRELEEIERVMDRDTFMDVRQAVD 180
Query: 198 WGVVDKVLMSR 208
+GV+D+VL R
Sbjct: 181 FGVIDEVLTKR 191
>gi|242206306|ref|XP_002469009.1| predicted protein [Postia placenta Mad-698-R]
gi|220731874|gb|EED85714.1| predicted protein [Postia placenta Mad-698-R]
Length = 200
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 113/199 (56%), Positives = 147/199 (73%), Gaps = 9/199 (4%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+EQT RGERSYDI+SRLL+ER++ + G I D + L AQLLFLEAE K I LYIN
Sbjct: 1 MVIEQTGRGERSYDIFSRLLRERVIMLYGPIRDTDSALTVAQLLFLEAEETSKPIHLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAG+AIYDT ++ PI T+C+GQA SMGSLLL+AGEKG R ALP++ I++HQP
Sbjct: 61 SPGGSVTAGLAIYDT--YVSSPIHTYCVGQACSMGSLLLAAGEKGKRHALPHSTIMIHQP 118
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK-------TLDRDHIMSAS 193
SGG SGQASDI HA++I+++++ L IY ++CGK E VE L+RD+ M+A
Sbjct: 119 SGGASGQASDIVIHAKEILRVRQLLTGIYQRHCGKDGESVEAGVQRFETALERDYFMTAQ 178
Query: 194 EACDWGVVDKVLMSRIDIE 212
EA ++G+VD VL R ++
Sbjct: 179 EAREFGIVDSVLEKRPKLD 197
>gi|56961817|ref|YP_173539.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
gi|67460457|sp|Q5WLZ7|CLPP1_BACSK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|56908051|dbj|BAD62578.1| ATP-dependent Clp protease proteolytic subunit [Bacillus clausii
KSM-K16]
Length = 193
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 98/191 (51%), Positives = 139/191 (72%), Gaps = 1/191 (0%)
Query: 16 LGL-VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ + +P V+EQT GERSYDIYSRLLK+RI+F+ +I D +A + AQLLFL + +P+K+
Sbjct: 1 MNIPIPYVMEQTRYGERSYDIYSRLLKDRIIFIGDEITDTLANSVTAQLLFLASTDPEKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG V+AG AI DTM +IKP I T C G AAS ++LL G KG R ALP+A
Sbjct: 61 ISIYINSPGGSVSAGFAILDTMLYIKPDIQTICTGMAASFAAVLLVGGTKGKRCALPHAE 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQASD++ +AQ I+K ++ +N + G+T +++ +RD+ MSA+E
Sbjct: 121 VMIHQPHGGMKGQASDMDIYAQRILKQRKEINHFIAERTGQTPDKIATDSERDYFMSAAE 180
Query: 195 ACDWGVVDKVL 205
A D+GV+D +L
Sbjct: 181 AKDYGVIDNIL 191
>gi|291297753|ref|YP_003509031.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
gi|290566973|gb|ADD39938.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
Length = 206
Score = 209 bits (532), Expect = 2e-52, Method: Composition-based stats.
Identities = 86/197 (43%), Positives = 133/197 (67%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T GER++DIYSRLL +RI+F+ +I+D +A ++ AQLL LE+ +P +I LY
Sbjct: 6 IPTVVEKTAGGERAFDIYSRLLSDRIIFIGTEIDDGVANVVMAQLLHLESVSPDLQIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +A AIYDTM+FI+P I+T CMG A+S ++LL+AG G R L +A+++LH
Sbjct: 66 INSPGGSFSALTAIYDTMEFIRPDIATTCMGHASSAAAVLLAAGTPGKRSMLRHAKVMLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS G D+ A+++ K++ ++EI + G ++ + DR+ SA EA ++
Sbjct: 126 QPSSQAQGTLPDLAIQAKEVAKVRAEMDEILSHHTGHPVAKIREDTDRNKTFSAQEAVEY 185
Query: 199 GVVDKVLMSRIDIEEKS 215
G+VD+++ SR K+
Sbjct: 186 GLVDQIITSRKASPVKA 202
>gi|126657894|ref|ZP_01729047.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620834|gb|EAZ91550.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 199
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 103/198 (52%), Positives = 140/198 (70%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGIANRIVALLLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QASDIE A +I++I+ +LN++ CG+T E++EK DRD+ MS
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRSQLNQLLANQCGQTLEKIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA ++G++DKV+ R
Sbjct: 181 AEEAKEYGLIDKVIEERS 198
>gi|254409743|ref|ZP_05023524.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
gi|196183740|gb|EDX78723.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
Length = 198
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 143/197 (72%), Gaps = 3/197 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q DIY+RL +ERI+F+ +++D + I A +L+L++E+
Sbjct: 1 MPIGVPKVPYQLPGSPYSDWIDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG VTAGMAIYDTMQ IK + T C+G AASMGS LL+AG++G R ALP+
Sbjct: 61 KDIYLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGKQGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DIE A++I++I+R+LN+IY G+T E++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGVRGQATDIEIEAREILRIRRQLNQIYADKTGQTVEKIEKDIDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSRI 209
EA ++G++D+V+ R
Sbjct: 181 QEAKEYGLIDRVIEERA 197
>gi|326330020|ref|ZP_08196334.1| Clp protease [Nocardioidaceae bacterium Broad-1]
gi|325952228|gb|EGD44254.1| Clp protease [Nocardioidaceae bacterium Broad-1]
Length = 201
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 82/192 (42%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T RGER+ D+YSRLL +RIV++ I+D +A ++ AQL+ LE++ P +I LY
Sbjct: 6 IPSVVEKTPRGERALDVYSRLLSDRIVYLGTPIDDGVANVVIAQLIHLESDAPDTQIELY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG TA IYDTMQF++ P++T C+GQAA ++LL+AG+ G R LP+AR++L
Sbjct: 66 LNSPGGDPTAMFGIYDTMQFLRSPVATTCVGQAAGSAAVLLAAGDPGRRTVLPHARVVLQ 125
Query: 139 QPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP G +D++ A++I +++ ++ + ++ G++ EE+ +RD ++ A EA
Sbjct: 126 QPGQDGQRGDVTDLQVAAKEIGRLRAEMDTLLARHTGRSAEEIHADTERDLVLGAEEAVA 185
Query: 198 WGVVDKVLMSRI 209
+G+ D VL SR
Sbjct: 186 YGLADAVLESRK 197
>gi|299140390|ref|ZP_07033550.1| Endopeptidase Clp [Acidobacterium sp. MP5ACTX8]
gi|298597640|gb|EFI53818.1| Endopeptidase Clp [Acidobacterium sp. MP5ACTX8]
Length = 191
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 103/188 (54%), Positives = 148/188 (78%), Gaps = 1/188 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MV+EQT+RGERSYDIYSRLL++ I+F+ I+D++A LI AQ+LFL E+P+K+I LYIN
Sbjct: 1 MVLEQTSRGERSYDIYSRLLRDNIIFLGTPIDDNVANLIIAQMLFLSGEDPEKDIQLYIN 60
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG ++AG+AIYDTMQ+IK + TFC+GQAASMG+ LL AG+KG RF LPN+RIL+HQP
Sbjct: 61 SPGGSISAGLAIYDTMQYIKNDVVTFCIGQAASMGAFLLMAGKKGKRFTLPNSRILIHQP 120
Query: 141 SG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
S G GQA+DI+ HA++I++I+ N + N G+ + +E+ ++RD IM+A +A ++G
Sbjct: 121 SMGGLGGQATDIDIHAREILRIRELTNRLMSANTGQPLDRIERDVERDFIMTAPQAKEYG 180
Query: 200 VVDKVLMS 207
++D ++
Sbjct: 181 IIDDIIDR 188
>gi|46203182|ref|ZP_00051927.2| COG0740: Protease subunit of ATP-dependent Clp proteases
[Magnetospirillum magnetotacticum MS-1]
Length = 201
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 96/191 (50%), Positives = 138/191 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T GER++D++SRLL ERIVF+ +I+D +A ++ AQLL LE++ P +EI LY
Sbjct: 6 IPTVVERTPLGERAFDVFSRLLSERIVFLGTEIDDGVANVVMAQLLHLESDAPDQEIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA MAIYDTMQF++ +ST CMGQAAS ++LL+AG G RF L ++R+LLH
Sbjct: 66 INSPGGSATALMAIYDTMQFVRCDVSTICMGQAASAAAVLLAAGTPGKRFVLEHSRVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SD+ A++I++I+ E+ ++ G+T E + DRD +++A +A ++
Sbjct: 126 QPSGGGEGTISDLSIQAEEILRIRSETEEVLARHTGQTVERLRADTDRDLVLTARQAVEY 185
Query: 199 GVVDKVLMSRI 209
GV D V+ SR
Sbjct: 186 GVADAVVTSRK 196
>gi|268529044|ref|XP_002629648.1| C. briggsae CBR-CLPP-1 protein [Caenorhabditis briggsae]
Length = 206
Score = 209 bits (531), Expect = 3e-52, Method: Composition-based stats.
Identities = 111/186 (59%), Positives = 150/186 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V++ +GER+YDIYSRLL++RIV + ++D MA+ + AQLLFL++E+ +K I +Y
Sbjct: 11 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFMASALIAQLLFLQSESSKKPIHMY 70
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ I P++T+ +GQA+SMGSLLL+AGEKGMR ALPNARI++H
Sbjct: 71 INSPGGSVTAGLAIYDTMQMISAPVATWVIGQASSMGSLLLAAGEKGMRSALPNARIMVH 130
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SDI A++I ++K+RLNEIYV + G +Y+E+E+TLDRD MSA EA +
Sbjct: 131 QPSGGAQGTCSDIVIRAEEITRLKKRLNEIYVHHTGISYDEIERTLDRDRFMSAQEALKF 190
Query: 199 GVVDKV 204
G+VDK+
Sbjct: 191 GLVDKI 196
>gi|300681014|sp|A8WPG6|CLPP1_CAEBR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1,
mitochondrial; Flags: Precursor
gi|309366007|emb|CAP22373.2| CBR-CLPP-1 protein [Caenorhabditis briggsae AF16]
Length = 219
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 111/186 (59%), Positives = 150/186 (80%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V++ +GER+YDIYSRLL++RIV + ++D MA+ + AQLLFL++E+ +K I +Y
Sbjct: 24 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFMASALIAQLLFLQSESSKKPIHMY 83
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ I P++T+ +GQA+SMGSLLL+AGEKGMR ALPNARI++H
Sbjct: 84 INSPGGSVTAGLAIYDTMQMISAPVATWVIGQASSMGSLLLAAGEKGMRSALPNARIMVH 143
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SDI A++I ++K+RLNEIYV + G +Y+E+E+TLDRD MSA EA +
Sbjct: 144 QPSGGAQGTCSDIVIRAEEITRLKKRLNEIYVHHTGISYDEIERTLDRDRFMSAQEALKF 203
Query: 199 GVVDKV 204
G+VDK+
Sbjct: 204 GLVDKI 209
>gi|298252276|ref|ZP_06976079.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
gi|297546868|gb|EFH80736.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
Length = 211
Score = 208 bits (530), Expect = 3e-52, Method: Composition-based stats.
Identities = 102/191 (53%), Positives = 147/191 (76%), Gaps = 2/191 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+E T RGER+YD++SRLL++RI+ V G I+D M+ L+ AQLL+L AE+ ++EI++
Sbjct: 5 LVPTVLENTPRGERAYDLFSRLLRDRIIVVNGPIDDTMSGLVVAQLLYLAAEDSKREINM 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG + AG+ IYDTM+ + PIST C+G AAS G++LL AGEKG RF++P+ARI L
Sbjct: 65 YINSPGGSINAGLGIYDTMRVLPCPISTTCVGYAASFGTILLLAGEKGRRFSMPHARIHL 124
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP SG SGQASDI+ HA++I+ ++ +N+I ++ G+T E ++K +RD MSA EA
Sbjct: 125 HQPLISGSLSGQASDIDIHAREILHLRSEINDIIQEHSGQTLERIQKDTNRDFYMSAVEA 184
Query: 196 CDWGVVDKVLM 206
++G++D +L
Sbjct: 185 KEYGIIDDILT 195
>gi|218245805|ref|YP_002371176.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8801]
gi|34222618|sp|Q93AD7|CLPP_SYNP8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16506757|gb|AAL23931.1|AF423175_1 putative ATP-dependent Clp proteinase [Cyanothece sp. PCC 8801]
gi|218166283|gb|ACK65020.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
Length = 199
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL++G G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QA+DI+ A +I++I+++LNEI G+T E+++K DRD+ MS
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKTGQTIEKIQKDTDRDYYMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G++DKV+ R
Sbjct: 181 AEEAQAYGLIDKVIEDRT 198
>gi|241895065|ref|ZP_04782361.1| ATP-dependent Clp protease proteolytic subunit [Weissella
paramesenteroides ATCC 33313]
gi|241871783|gb|EER75534.1| ATP-dependent Clp protease proteolytic subunit [Weissella
paramesenteroides ATCC 33313]
Length = 197
Score = 208 bits (530), Expect = 4e-52, Method: Composition-based stats.
Identities = 104/195 (53%), Positives = 145/195 (74%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+EQ++ GERSYDI+SRLL +RI+ V G+IE MAT I AQLLFL+A++P K+I
Sbjct: 1 MTPIPYVIEQSSHGERSYDIFSRLLIDRIIMVNGEIESQMATAIIAQLLFLDAQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AGMAIYDTM FI + T +G AASM S+L S+G KG RF LPN++
Sbjct: 61 YMYINSPGGEVNAGMAIYDTMNFISADVQTITIGLAASMASVLASSGAKGKRFILPNSQF 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQPSGG GQ ++I A++I+K +++LN+I N GK +EEVEK +RDH + A E+
Sbjct: 121 MIHQPSGGAQGQQTEIAIAAEEILKTRKKLNQILADNTGKPFEEVEKDTERDHWLDAEES 180
Query: 196 CDWGVVDKVLMSRID 210
++G++DK++ S D
Sbjct: 181 LEYGLIDKIMTSAKD 195
>gi|302542937|ref|ZP_07295279.1| Clp protease [Streptomyces hygroscopicus ATCC 53653]
gi|302460555|gb|EFL23648.1| Clp protease [Streptomyces himastatinicus ATCC 53653]
Length = 201
Score = 208 bits (529), Expect = 4e-52, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 136/191 (71%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GER+YDIYSRLL ERI+F+ +I+D +A ++ AQLL LE+ P++EI++Y
Sbjct: 6 IPTVVERTTQGERAYDIYSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSGPEQEIAIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F+ PISTFC+GQAAS ++LL+ G+ G RF L ++R+LL
Sbjct: 66 INSPGGSYTSLMAIYDTMTFVTAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHSRVLLG 125
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G G SD+ A+++++I+ ++ E+ ++ ++ +DRD + +A EA
Sbjct: 126 QPATGGARGTVSDLSLQAKEMLRIRAQVEEVLSRHTPHDVAKLRADMDRDRVFTAEEAVT 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLSRR 196
>gi|218678052|ref|ZP_03525949.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CIAT
894]
Length = 176
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 146/176 (82%), Positives = 165/176 (93%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLEAENP+KEI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MRFA PN+RI
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++HQPSGGF GQASDIERHA+DI+K+KRRLNE+YVK+ G+TYEEVEKTLDRDH M
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEVYVKHTGRTYEEVEKTLDRDHFMD 176
>gi|111223668|ref|YP_714462.1| ATP-dependent Clp protease proteolytic subunit [Frankia alni
ACN14a]
gi|111151200|emb|CAJ62911.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Frankia alni ACN14a]
Length = 221
Score = 208 bits (529), Expect = 5e-52, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 142/194 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +VE+T+RGE D YS+LLKERIVF+ Q++D A + AQLLFLE+E+P ++IS+
Sbjct: 19 VLPNIVERTSRGEYGMDPYSKLLKERIVFLGVQVDDVSANDVMAQLLFLESEDPDRDISI 78
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 79 YINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILI 138
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SD+E A++I++++ + ++ G++ E+ + +RD I SA+EA +
Sbjct: 139 HQPSAQGEGQSSDLEIQAREILRVRALQETLLARHTGRSETEIRRDTERDKIFSAAEAKE 198
Query: 198 WGVVDKVLMSRIDI 211
+G+VD V+ SR
Sbjct: 199 YGLVDDVITSRKST 212
>gi|307708900|ref|ZP_07645360.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
SK564]
gi|322376945|ref|ZP_08051438.1| Clp protease [Streptococcus sp. M334]
gi|307620236|gb|EFN99352.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
SK564]
gi|321282752|gb|EFX59759.1| Clp protease [Streptococcus sp. M334]
Length = 196
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSIEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|289644976|ref|ZP_06477015.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
gi|289505212|gb|EFD26272.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
Length = 210
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 95/203 (46%), Positives = 146/203 (71%), Gaps = 2/203 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + + ++P ++E+T+RGE D YS+LLKERI+F+ QI+D A I AQLL+L
Sbjct: 1 MTRTAVNRY--VLPNIIERTSRGEYGMDPYSKLLKERIIFLGTQIDDVSANDIMAQLLYL 58
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E E+ ++ISLYINSPGG TA MAIYDT+QF++P I T C+GQA S ++LL+AG G
Sbjct: 59 EGEDADRDISLYINSPGGSFTALMAIYDTLQFVRPDIQTLCLGQAVSGAAVLLAAGTPGK 118
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFAL N+RILL QPS GQ+SD+E HA++I++++ L I ++ ++ +++ + ++R
Sbjct: 119 RFALSNSRILLDQPSSQSQGQSSDLEIHAREILRMRDLLETILARHTNRSPDQIRRDVER 178
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I+ A+EA ++G+VD+V+ SR
Sbjct: 179 DKILDANEAVEYGLVDEVIQSRK 201
>gi|284054834|ref|ZP_06385044.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 212
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 95/179 (53%), Positives = 133/179 (74%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G++PMVVEQ+ GER++D+YSRLL++RI+F+ I+D +A + AQ+LFLE+E+P+K+I
Sbjct: 34 GVIPMVVEQSGMGERAFDLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQ 93
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM IYDTMQ I+P + T C G AASMG+ LL++G G R +LP++RI+
Sbjct: 94 LYINSPGGSVTAGMGIYDTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIM 153
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP GG GQA DIE A++I+ K LN + ++ G+ E + +RD MSA+EA
Sbjct: 154 IHQPLGGAQGQAIDIEIQAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEA 212
>gi|289168250|ref|YP_003446519.1| ATP-dependent CLP protease proteolytic subunit [Streptococcus mitis
B6]
gi|288907817|emb|CBJ22657.1| ATP-dependent CLP protease proteolytic subunit [Streptococcus mitis
B6]
Length = 196
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEKILAENSGQSIEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|308462025|ref|XP_003093299.1| CRE-CLPP-1 protein [Caenorhabditis remanei]
gi|308250366|gb|EFO94318.1| CRE-CLPP-1 protein [Caenorhabditis remanei]
Length = 222
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 151/196 (77%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V++ +GER+YDIYSRLL++RIV + ++D +A+ + AQLLFL++E+ +K I +Y
Sbjct: 27 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 86
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTMQ I P++T+ +GQA+SMGSLLL+AGEKGMR ALPNARI++H
Sbjct: 87 INSPGGSVTAGLAIYDTMQMISAPVATWVIGQASSMGSLLLAAGEKGMRSALPNARIMVH 146
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SDI A++I ++K+RLNEIYV + G +Y+E+E+TLDRD MSA EA +
Sbjct: 147 QPSGGAQGTCSDIVIRAEEITRLKKRLNEIYVHHTGISYDEIERTLDRDRFMSAQEALKF 206
Query: 199 GVVDKVLMSRIDIEEK 214
G+VDK+ +
Sbjct: 207 GLVDKIETHSGSMPSD 222
>gi|119716961|ref|YP_923926.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
gi|119537622|gb|ABL82239.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
Length = 200
Score = 207 bits (528), Expect = 6e-52, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 138/193 (71%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T RGER+ DIYSRLL +RIV+V +I+D +A ++ AQLL LE++ P + ISLY
Sbjct: 6 IPSVVERTARGERAVDIYSRLLTDRIVYVGTEIDDGVANVVIAQLLHLESDAPDQPISLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG VTA +AIYDTMQF++ P+ T C+GQAAS ++LL+ GE G R LP AR++LH
Sbjct: 66 LNSPGGSVTAMLAIYDTMQFVRSPVGTTCVGQAASSAAVLLAGGEPGSRTVLPRARVVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G D+ A++IV+++ + EI ++ G++ +V DRD ++SA +A +
Sbjct: 126 QPSGGGQGTLPDLALQAKEIVRLRTAMEEILAEHTGRSVAQVHADTDRDLVLSAEQAVAY 185
Query: 199 GVVDKVLMSRIDI 211
G+ D VL SR +
Sbjct: 186 GLADAVLDSRKKV 198
>gi|324529259|gb|ADY48999.1| ATP-dependent Clp protease proteolytic subunit 1 [Ascaris suum]
Length = 218
Score = 207 bits (528), Expect = 7e-52, Method: Composition-based stats.
Identities = 102/186 (54%), Positives = 143/186 (76%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V++ R ER YDIYSRLLK+RI+ V I D +A+ I AQLL+L+ E+ + I++Y
Sbjct: 26 IPLVIDNDGRIERVYDIYSRLLKDRIICVMTPINDQVASAIIAQLLYLQGESSKSTINMY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+ IYDTMQ+I P++T+C+GQA+SMGSLLL AGEKGMR +LPN+RI++H
Sbjct: 86 INSPGGSVTAGLGIYDTMQYISAPVATWCIGQASSMGSLLLCAGEKGMRSSLPNSRIMVH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G ASD+ A++I ++++RLNE+Y K+ G+ + +E LDRD MSA EA +
Sbjct: 146 QPSGGAEGTASDVIIRAEEIARLRKRLNELYAKHTGQDVKIIEAALDRDKYMSAEEAKAF 205
Query: 199 GVVDKV 204
G++D +
Sbjct: 206 GLIDHI 211
>gi|21672724|ref|NP_660791.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
gi|25008301|sp|Q8K990|CLPP_BUCAP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|21623368|gb|AAM68002.1| ATP-dependent Clp protease proteolytic subunit [Buchnera aphidicola
str. Sg (Schizaphis graminum)]
Length = 197
Score = 207 bits (527), Expect = 7e-52, Method: Composition-based stats.
Identities = 114/191 (59%), Positives = 154/191 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L+PMVVEQ +RGERSYDIYSRLLKERI+F+TG IED+MA+ I AQ+LFLEAE+ K+I L
Sbjct: 7 LIPMVVEQHSRGERSYDIYSRLLKERIIFITGTIEDNMASSIVAQMLFLEAESLDKDIFL 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG++T+GM+IYDTMQFIKP ++T C+GQA SM + LLS+G KG R LPNARI++
Sbjct: 67 YINSPGGIITSGMSIYDTMQFIKPDVNTICIGQACSMAAFLLSSGTKGKRSCLPNARIMI 126
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG+ GQASDI HA++I K+K++LN++ N G++ +++ K +RD +SA E+
Sbjct: 127 HQPLGGYQGQASDIAIHAEEINKMKKKLNKLMSLNTGQSIKKINKDTERDCFLSAHESIK 186
Query: 198 WGVVDKVLMSR 208
+G++D +L R
Sbjct: 187 YGLIDLILTQR 197
>gi|284018074|sp|Q27539|CLPP1_CAEEL RecName: Full=ATP-dependent Clp protease proteolytic subunit 1,
mitochondrial; AltName: Full=Endopeptidase Clp; Flags:
Precursor
Length = 221
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 150/196 (76%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V++ +GER+YDIYSRLL++RIV + ++D +A+ + AQLLFL++E+ +K I +Y
Sbjct: 26 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDT+Q I P+ST+ +GQA+SMGSLLL AGEKGMR ALPN+RI++H
Sbjct: 86 INSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SDI A++I ++KRRLNEIYV + G +Y+E+EKTLDRD MSA EA +
Sbjct: 146 QPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKF 205
Query: 199 GVVDKVLMSRIDIEEK 214
G+VD++ +
Sbjct: 206 GLVDQIETHNGSMPSD 221
>gi|257439814|ref|ZP_05615569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Faecalibacterium prausnitzii A2-165]
gi|257197723|gb|EEU96007.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Faecalibacterium prausnitzii A2-165]
Length = 198
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 146/198 (73%), Gaps = 5/198 (2%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP VVEQ+ GERSYDI+SRLL +RI+ ++ + D A+L+ AQLL+LE ++P K+I
Sbjct: 1 MSFVPYVVEQSAHGERSYDIFSRLLNDRIIVLSEDVNDTSASLVVAQLLYLEGQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG ++AGMAI+DTMQ+IK +ST CMG AASMG+ LL+ G KG RFALPN+ I
Sbjct: 61 SLYINSPGGSISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLAGGTKGKRFALPNSEI 120
Query: 136 LLHQP-----SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
L+HQP GG SGQ +DI+ HA+ +V I+ ++N + + G+ E+++ +RD+ M
Sbjct: 121 LIHQPLIGGQGGGLSGQTTDIKIHAEHMVYIRDKMNHMLSEYTGQPLEKIQLDTERDNYM 180
Query: 191 SASEACDWGVVDKVLMSR 208
+A EA ++G++D+V+ R
Sbjct: 181 TALEAKEYGLIDEVIAHR 198
>gi|17538017|ref|NP_496215.1| CLP Protease family member (clpp-1) [Caenorhabditis elegans]
gi|3881896|emb|CAA88886.1| C. elegans protein ZK970.2a, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 206
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 110/196 (56%), Positives = 150/196 (76%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V++ +GER+YDIYSRLL++RIV + ++D +A+ + AQLLFL++E+ +K I +Y
Sbjct: 11 IPFVIDNEGKGERTYDIYSRLLRDRIVCLMTPVDDFIASALIAQLLFLQSESGKKPIHMY 70
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDT+Q I P+ST+ +GQA+SMGSLLL AGEKGMR ALPN+RI++H
Sbjct: 71 INSPGGSVTAGLAIYDTIQMISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVH 130
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G SDI A++I ++KRRLNEIYV + G +Y+E+EKTLDRD MSA EA +
Sbjct: 131 QPSGGAQGTCSDIVIRAEEITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKF 190
Query: 199 GVVDKVLMSRIDIEEK 214
G+VD++ +
Sbjct: 191 GLVDQIETHNGSMPSD 206
>gi|307706962|ref|ZP_07643761.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
mitis SK321]
gi|307617676|gb|EFN96844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
mitis SK321]
Length = 196
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNILEKILAENSGQSIEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|125623498|ref|YP_001031981.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|18203672|sp|Q9ZAB0|CLPP_LACLM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|11528583|gb|AAD01866.2| protease [Lactococcus lactis subsp. cremoris MG1363]
gi|124492306|emb|CAL97240.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. cremoris MG1363]
gi|300070250|gb|ADJ59650.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. cremoris NZ9000]
Length = 199
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ++RGER+YDIYSRLLK+RI+ +TG +ED MA I AQLLFL+A++ K+I L
Sbjct: 4 LVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 64 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLI 123
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K ++RL +I N ++ E++ K +RDH M A E
Sbjct: 124 HQPMGGAGQGTQQTDMAIVAEQLLKTRKRLEQILADNSNRSLEQIHKDAERDHWMDAKET 183
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 184 LEYGFIDEIMENNS 197
>gi|29827688|ref|NP_822322.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
avermitilis MA-4680]
gi|67460535|sp|Q82NZ3|CLPP2_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|29604788|dbj|BAC68857.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces avermitilis MA-4680]
Length = 200
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 135/191 (70%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ NP+ EI++Y
Sbjct: 6 IPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESANPEHEIAIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++++I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 126 QPASGGRQGTVSDLSLQAKEMIRIRSQVEEVLSRHTRHDIATLRADMDRDKVFTAQEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLSRR 196
>gi|302549127|ref|ZP_07301469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
gi|302466745|gb|EFL29838.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
Length = 200
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T GERS D++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EIS+Y
Sbjct: 6 IPYVVERTAHGERSSDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEISVY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM ++K PIST C+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMSYVKAPISTCCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G S A D+ A+++V+I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 126 QPAAGGSRGAISDLALQAKEMVRIRSQVEEVLARHTHHDLATLRADMDRDKVFTAEEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLSRR 196
>gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7424]
gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 199
Score = 207 bits (527), Expect = 8e-52, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QA+DIE A++I++I+++LN++ + GKT E++EK DRD+ MS
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRQQLNQMLAERTGKTLEQIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
EA ++G++DKV+ R
Sbjct: 181 PYEAQEYGLIDKVIEERA 198
>gi|171780217|ref|ZP_02921121.1| hypothetical protein STRINF_02005 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281565|gb|EDT47000.1| hypothetical protein STRINF_02005 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 196
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG ++D+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVDDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K ++ L +I N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEHLLKTRQNLEQILADNSGQSLEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++++
Sbjct: 181 LEYGFIDEIMVNNE 194
>gi|37523335|ref|NP_926712.1| ATP-dependent Clp protease proteolytic subunit [Gloeobacter
violaceus PCC 7421]
gi|60389714|sp|Q7NEW2|CLPP1_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|35214339|dbj|BAC91707.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 207 bits (527), Expect = 9e-52, Method: Composition-based stats.
Identities = 89/196 (45%), Positives = 139/196 (70%), Gaps = 2/196 (1%)
Query: 16 LGL-VPMVVEQTNRGE-RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ + +P V + G+ + DI++RL +RI+F+ +++D +A I A +L+L++E+P+K
Sbjct: 1 MPIGIPKVPYRLPGGQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPEK 60
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG V+AG+AIYDTMQ ++ ++T C+G AASMGS LL+AG KG R +LP++
Sbjct: 61 DIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPHS 120
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GG GQA+DI A++I+ K RLN+I + G+ E +E+ DRD MSA
Sbjct: 121 RIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSAE 180
Query: 194 EACDWGVVDKVLMSRI 209
+A +G++D+V+ R
Sbjct: 181 DAKQYGLIDQVVQHRP 196
>gi|302384943|ref|YP_003820765.1| Endopeptidase Clp [Clostridium saccharolyticum WM1]
gi|302195571|gb|ADL03142.1| Endopeptidase Clp [Clostridium saccharolyticum WM1]
Length = 197
Score = 207 bits (526), Expect = 9e-52, Method: Composition-based stats.
Identities = 96/197 (48%), Positives = 141/197 (71%), Gaps = 2/197 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+PMV+EQT RGERSYDI+SRLL +RI+ + G + + A+LI AQ+LFLE+ + K+
Sbjct: 1 MNNLIPMVIEQTTRGERSYDIFSRLLNDRIIMLNGTVTNETASLIMAQMLFLESADCTKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VT G AI DTM +IK +ST +GQ+ S SLLL++G+KG RFAL N+
Sbjct: 61 INLYINSPGGSVTDGFAIMDTMNYIKCDVSTISIGQSGSAASLLLASGKKGKRFALKNSE 120
Query: 135 ILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
IL+HQPS GQA+DI H++ + + K +L+EIY + G+ +++ ++RDH ++A
Sbjct: 121 ILIHQPSISGGLQGQATDIRIHSEWLERTKEKLHEIYSRLTGQPLNRIQEDMERDHYLTA 180
Query: 193 SEACDWGVVDKVLMSRI 209
EA D+G++D++L +
Sbjct: 181 EEAKDYGLIDEILNRQK 197
>gi|313114091|ref|ZP_07799643.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Faecalibacterium cf. prausnitzii KLE1255]
gi|310623500|gb|EFQ06903.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Faecalibacterium cf. prausnitzii KLE1255]
Length = 198
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 101/198 (51%), Positives = 148/198 (74%), Gaps = 5/198 (2%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP VVEQ++ GERSYDI+SRLL +RI+ ++ + D A+L+ AQLL+LE ++P K+I
Sbjct: 1 MSFVPYVVEQSSHGERSYDIFSRLLNDRIIVLSEDVNDTSASLVVAQLLYLEGQDPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLYINSPGG ++AGMAI+DTMQ+IK +ST CMG AASMG+ LL++G KG RFALPN+ I
Sbjct: 61 SLYINSPGGSISAGMAIHDTMQYIKCDVSTICMGMAASMGAFLLASGTKGKRFALPNSEI 120
Query: 136 LLHQP-----SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
L+HQP GG SGQ +DI+ HA+ +V I+ ++N + + G+ E+++ +RD+ M
Sbjct: 121 LIHQPLIGGQGGGLSGQTTDIKIHAEHMVYIRDKMNRMLSEYTGQPLEKIQLDTERDNYM 180
Query: 191 SASEACDWGVVDKVLMSR 208
SA +A ++G++D+V+ R
Sbjct: 181 SALQAKEYGLIDEVIAHR 198
>gi|322374649|ref|ZP_08049163.1| Clp protease [Streptococcus sp. C300]
gi|321280149|gb|EFX57188.1| Clp protease [Streptococcus sp. C300]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEKILADNSGKSVEQIHADAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|313891327|ref|ZP_07824945.1| endopeptidase Clp [Streptococcus pseudoporcinus SPIN 20026]
gi|313120394|gb|EFR43515.1| endopeptidase Clp [Streptococcus pseudoporcinus SPIN 20026]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 96/194 (49%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K ++RL +I N GKT +++ K +RD+ M A E
Sbjct: 121 HQPMGGAGSGTQQTDMAIVAEQLLKTRKRLEKILADNSGKTIKQIHKDAERDYWMDAKET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMENNE 194
>gi|293365057|ref|ZP_06611774.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
oralis ATCC 35037]
gi|307702233|ref|ZP_07639193.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptococcus oralis ATCC 35037]
gi|315612826|ref|ZP_07887737.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
sanguinis ATCC 49296]
gi|331266748|ref|YP_004326378.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
oralis Uo5]
gi|291316507|gb|EFE56943.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
oralis ATCC 35037]
gi|307624246|gb|EFO03223.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Streptococcus oralis ATCC 35037]
gi|315314936|gb|EFU62977.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
sanguinis ATCC 49296]
gi|326683420|emb|CBZ01038.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
oralis Uo5]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKSVEQIHADAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|270292328|ref|ZP_06198539.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus sp.
M143]
gi|270278307|gb|EFA24153.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus sp.
M143]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILATNSGKSVEQIHADAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|116511469|ref|YP_808685.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. cremoris SK11]
gi|123320556|sp|Q030V9|CLPP_LACLS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116107123|gb|ABJ72263.1| ATP-dependent Clp protease proteolytic subunit ClpP [Lactococcus
lactis subsp. cremoris SK11]
Length = 199
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ++RGER+YDIYSRLLK+RI+ +TG +ED MA I AQLLFL+A++ K+I L
Sbjct: 4 LVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 64 YVNTPGGSVSAGLAIVDTMNFIKSDVLTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLI 123
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K ++RL +I N ++ E++ K +RDH M A E
Sbjct: 124 HQPMGGAGQGTQQTDMAIVAEQLLKTRKRLEQILADNSNRSLEQIHKDAERDHWMDAKET 183
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 184 LEYGFIDEIMENNS 197
>gi|288905956|ref|YP_003431178.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus
gallolyticus UCN34]
gi|306831975|ref|ZP_07465130.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|306834099|ref|ZP_07467219.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus bovis
ATCC 700338]
gi|325978922|ref|YP_004288638.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
gi|288732682|emb|CBI14254.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus
gallolyticus UCN34]
gi|304423672|gb|EFM26818.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus bovis
ATCC 700338]
gi|304425901|gb|EFM29018.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
gallolyticus subsp. gallolyticus TX20005]
gi|325178850|emb|CBZ48894.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N G+T E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRQNLEQILADNSGQTLEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++++
Sbjct: 181 LEYGFIDEIMVNNE 194
>gi|257058851|ref|YP_003136739.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8802]
gi|256589017|gb|ACU99903.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 199
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 139/198 (70%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL++G G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QA+DI+ A +I++I+++LNEI G+T E+++K DRD+ MS
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAYKTGQTIEKIQKDTDRDYYMS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G++DKV+ R
Sbjct: 181 AEEAQAYGLIDKVIEDRT 198
>gi|225858557|ref|YP_002740067.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae 70585]
gi|254763802|sp|C1C691|CLPP_STRP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225721123|gb|ACO16977.1| Clp protease [Streptococcus pneumoniae 70585]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDSMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|306829178|ref|ZP_07462368.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
ATCC 6249]
gi|304428264|gb|EFM31354.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
ATCC 6249]
Length = 196
Score = 207 bits (526), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKSVEQIHADAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|297153499|gb|ADI03211.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
bingchenggensis BCW-1]
Length = 200
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ NP++EIS+Y
Sbjct: 6 VPYVIERTAQGERSYDVFSRLLNERIIFLGTEIDDGVANVVIAQLLHLESANPEREISIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 LNSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLQHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++V+I+ ++ E+ ++ + +DRD +++A EA
Sbjct: 126 QPASGGRQGTVSDLSLAAKEMVRIRSQVEEVLSRHTHHDVATLRADMDRDKVLTAEEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLSRR 196
>gi|261205022|ref|XP_002627248.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
dermatitidis SLH14081]
gi|239592307|gb|EEQ74888.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
dermatitidis SLH14081]
gi|239611539|gb|EEQ88526.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
dermatitidis ER-3]
Length = 248
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 104/199 (52%), Positives = 148/199 (74%), Gaps = 2/199 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERIV + G++++ ++ I AQLLFLEA+NP+K I LY
Sbjct: 37 TPFVTETVGGGWHTYDIFSRLLKERIVCLNGEVDETLSASIVAQLLFLEADNPEKPIHLY 96
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+A+YDTM +I P+ST C+GQAASMGSLLL G G R+ LP++ +++H
Sbjct: 97 INSPGGSVTAGLAVYDTMTYISAPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVH 156
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEAC 196
QPSGG+ GQA+DI HA++I++++R+LNEIY + K + +E+EK ++RD+ M A EA
Sbjct: 157 QPSGGYFGQATDIAIHAKEILRVRRQLNEIYKLHLTKEMSLDEIEKWMERDYFMGAREAL 216
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+ G+VD++L RI + +
Sbjct: 217 EMGIVDEILDRRIKPKTED 235
>gi|15900641|ref|NP_345245.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae TIGR4]
gi|15902700|ref|NP_358250.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae R6]
gi|111657500|ref|ZP_01408244.1| hypothetical protein SpneT_02001290 [Streptococcus pneumoniae
TIGR4]
gi|116516216|ref|YP_816144.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae D39]
gi|148985320|ref|ZP_01818543.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP3-BS71]
gi|148989824|ref|ZP_01821118.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP6-BS73]
gi|148992407|ref|ZP_01822102.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP9-BS68]
gi|148997179|ref|ZP_01824833.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP11-BS70]
gi|149003358|ref|ZP_01828247.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP14-BS69]
gi|149007624|ref|ZP_01831241.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP18-BS74]
gi|149020386|ref|ZP_01835278.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP23-BS72]
gi|168484851|ref|ZP_02709796.1| Clp protease [Streptococcus pneumoniae CDC1873-00]
gi|168486762|ref|ZP_02711270.1| Clp protease [Streptococcus pneumoniae CDC1087-00]
gi|168488414|ref|ZP_02712613.1| Clp protease [Streptococcus pneumoniae SP195]
gi|168490833|ref|ZP_02714976.1| Clp protease [Streptococcus pneumoniae CDC0288-04]
gi|168492895|ref|ZP_02717038.1| Clp protease [Streptococcus pneumoniae CDC3059-06]
gi|168575405|ref|ZP_02721341.1| Clp protease [Streptococcus pneumoniae MLV-016]
gi|169832484|ref|YP_001694209.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae Hungary19A-6]
gi|182683666|ref|YP_001835413.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae CGSP14]
gi|221231543|ref|YP_002510695.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pneumoniae ATCC 700669]
gi|225854255|ref|YP_002735767.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae JJA]
gi|225860721|ref|YP_002742230.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae Taiwan19F-14]
gi|237650410|ref|ZP_04524662.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae CCRI 1974]
gi|237822478|ref|ZP_04598323.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae CCRI 1974M2]
gi|298230046|ref|ZP_06963727.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae str. Canada MDR_19F]
gi|298255823|ref|ZP_06979409.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae str. Canada MDR_19A]
gi|298502532|ref|YP_003724472.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae TCH8431/19A]
gi|303255838|ref|ZP_07341879.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS455]
gi|303260009|ref|ZP_07345983.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP-BS293]
gi|303261415|ref|ZP_07347363.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP14-BS292]
gi|303264082|ref|ZP_07350003.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS397]
gi|303267620|ref|ZP_07353460.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS457]
gi|303269546|ref|ZP_07355310.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS458]
gi|307067350|ref|YP_003876316.1| ATp-dependent Clp protease [Streptococcus pneumoniae AP200]
gi|307127702|ref|YP_003879733.1| Clp protease [Streptococcus pneumoniae 670-6B]
gi|54036855|sp|P63788|CLPP_STRR6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040893|sp|P63787|CLPP_STRPN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122278970|sp|Q04LF4|CLPP_STRP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706476|sp|B1IAS4|CLPP_STRPI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706544|sp|B2INC9|CLPP_STRPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763803|sp|B8ZN39|CLPP_STRPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763805|sp|C1CD96|CLPP_STRZJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763807|sp|C1CQK8|CLPP_STRZT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|14972220|gb|AAK74885.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus
pneumoniae TIGR4]
gi|15458242|gb|AAK99460.1| ATP-dependent CLP protease proteolytic subunit [Streptococcus
pneumoniae R6]
gi|116076792|gb|ABJ54512.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae D39]
gi|147756879|gb|EDK63919.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP11-BS70]
gi|147758541|gb|EDK65539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP14-BS69]
gi|147760779|gb|EDK67750.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP18-BS74]
gi|147922518|gb|EDK73637.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP3-BS71]
gi|147924766|gb|EDK75850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP6-BS73]
gi|147928724|gb|EDK79737.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP9-BS68]
gi|147930688|gb|EDK81670.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP23-BS72]
gi|168994986|gb|ACA35598.1| Clp protease [Streptococcus pneumoniae Hungary19A-6]
gi|172042007|gb|EDT50053.1| Clp protease [Streptococcus pneumoniae CDC1873-00]
gi|182629000|gb|ACB89948.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae CGSP14]
gi|183570255|gb|EDT90783.1| Clp protease [Streptococcus pneumoniae CDC1087-00]
gi|183572984|gb|EDT93512.1| Clp protease [Streptococcus pneumoniae SP195]
gi|183574558|gb|EDT95086.1| Clp protease [Streptococcus pneumoniae CDC0288-04]
gi|183577054|gb|EDT97582.1| Clp protease [Streptococcus pneumoniae CDC3059-06]
gi|183578670|gb|EDT99198.1| Clp protease [Streptococcus pneumoniae MLV-016]
gi|220674003|emb|CAR68516.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pneumoniae ATCC 700669]
gi|225723038|gb|ACO18891.1| Clp protease [Streptococcus pneumoniae JJA]
gi|225727276|gb|ACO23127.1| Clp protease [Streptococcus pneumoniae Taiwan19F-14]
gi|298238127|gb|ADI69258.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae TCH8431/19A]
gi|301793906|emb|CBW36302.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pneumoniae INV104]
gi|301799764|emb|CBW32333.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pneumoniae OXC141]
gi|301801594|emb|CBW34292.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pneumoniae INV200]
gi|302597222|gb|EFL64327.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS455]
gi|302637549|gb|EFL68036.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP14-BS292]
gi|302638928|gb|EFL69389.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP-BS293]
gi|302640931|gb|EFL71314.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS458]
gi|302642850|gb|EFL73157.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS457]
gi|302646487|gb|EFL76713.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae BS397]
gi|306408887|gb|ADM84314.1| Protease subunit of ATP-dependent Clp proteases [Streptococcus
pneumoniae AP200]
gi|306484764|gb|ADM91633.1| Clp protease [Streptococcus pneumoniae 670-6B]
gi|327390104|gb|EGE88447.1| clp protease family protein [Streptococcus pneumoniae GA04375]
gi|332073128|gb|EGI83607.1| clp protease family protein [Streptococcus pneumoniae GA17570]
gi|332076026|gb|EGI86492.1| clp protease family protein [Streptococcus pneumoniae GA41301]
gi|332077163|gb|EGI87625.1| clp protease family protein [Streptococcus pneumoniae GA17545]
Length = 196
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
Length = 193
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ + ER+YDIYSRLLK+RI+FV I++ +A I AQLL+LEAE+P+K+I +YI
Sbjct: 4 PTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VT GMAIYDTM +IKP + T C+GQAASMG+ LL+AG KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
Query: 140 PSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GQA+DI HA +++KIK RL E+ KN GKT E++ + +RD+ +S+ EA +
Sbjct: 124 PLISGGLKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVN 183
Query: 198 WGVVDKVLMS 207
+G++D V
Sbjct: 184 YGLIDSVFKR 193
>gi|307152499|ref|YP_003887883.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982727|gb|ADN14608.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 199
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 139/197 (70%), Gaps = 4/197 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++E+P
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QA+DIE A++I++I+ +LN++ GK+ E++EK DRD+ MS
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRTQLNQMLADRTGKSIEQIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSR 208
EA ++G++DKV+ R
Sbjct: 181 PYEAKEYGLIDKVIEER 197
>gi|329937607|ref|ZP_08287126.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
griseoaurantiacus M045]
gi|329303006|gb|EGG46894.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
griseoaurantiacus M045]
Length = 202
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 93/191 (48%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP VVE+T +GERSYD++SRLL ERIVF+ +I+D +A ++ AQLL LE+ NP++EIS+Y
Sbjct: 8 VPYVVERTAQGERSYDVFSRLLSERIVFLGTEIDDGVANVVIAQLLHLESANPEQEISIY 67
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 68 LNSPGGSFTSLMAIYDTMTFVRAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 127
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G G SD+ A+++V+I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 128 QPAAGGAQGTVSDLALRAKEMVRIRAQVEEVLSRHTPHDVATLRADMDRDKVFTAEEAVA 187
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 188 YGLADEVLSRR 198
>gi|291236428|ref|XP_002738143.1| PREDICTED: caseinolytic peptidase, ATP-dependent, proteolytic
subunit-like [Saccoglossus kowalevskii]
Length = 231
Score = 206 bits (525), Expect = 1e-51, Method: Composition-based stats.
Identities = 101/189 (53%), Positives = 142/189 (75%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
RGER+YDIYSRLLKERI+ + G I D +++L+ AQLLFL++E+ +K I +YINSPGG V
Sbjct: 42 GRGERAYDIYSRLLKERIICLMGPITDDLSSLVVAQLLFLQSESNKKPIHMYINSPGGSV 101
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
TAG+ IYDTMQ++ PPIST+C+GQA SM SLLL AG GMR++LPN+RI++HQPSG G
Sbjct: 102 TAGLGIYDTMQYVLPPISTWCVGQACSMASLLLCAGFPGMRYSLPNSRIMVHQPSGQAHG 161
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA+DI+ A++I+K+K ++N +YVK+ + + + ++RD M+ EA ++G+VDKVL
Sbjct: 162 QATDIQIQAEEILKMKNQINNLYVKHTKQPLDFIAAAMERDKFMNPIEAEEFGLVDKVLD 221
Query: 207 SRIDIEEKS 215
E
Sbjct: 222 HPPMPGESK 230
>gi|239983580|ref|ZP_04706104.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
albus J1074]
gi|291455392|ref|ZP_06594782.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
albus J1074]
gi|291358341|gb|EFE85243.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
albus J1074]
Length = 200
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 133/191 (69%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T RGER++DIYS LL ERI+F+ +I+D +A ++ AQLL LE+ P +EI+LY
Sbjct: 6 IPTVVERTARGERAFDIYSSLLSERIIFLGTEIDDGVANVVIAQLLHLESVAPDQEIALY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MA+YDTM F+ P+STFC+GQAAS ++LL+ G+ G R L +AR+LL
Sbjct: 66 INSPGGSYTSLMAVYDTMTFVSAPLSTFCVGQAASTAAVLLAGGDPGRRLILEHARVLLG 125
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G G SD+ A+++ +++ + E+ ++ G + E + +DRD + +A EA
Sbjct: 126 QPASGGSQGTVSDLTVQAKEVARVRSQTEEVLSRHTGHSVERLRSDMDRDKVFTAEEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLTRR 196
>gi|317131949|ref|YP_004091263.1| Endopeptidase Clp [Ethanoligenens harbinense YUAN-3]
gi|315469928|gb|ADU26532.1| Endopeptidase Clp [Ethanoligenens harbinense YUAN-3]
Length = 196
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 98/196 (50%), Positives = 132/196 (67%), Gaps = 2/196 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P+V+EQTN GERSYDI+SRLL +RIV + + A+LI AQ+LFLE+ + K+
Sbjct: 1 MSNLIPVVIEQTNHGERSYDIFSRLLNDRIVMLNEPVSSESASLIVAQMLFLESADCDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG VT AI DTM +IK +ST C+G AAS SLLL AG KG RFAL N+
Sbjct: 61 IQFYINSPGGSVTDAFAILDTMNYIKCDVSTICIGMAASAASLLLVAGTKGKRFALCNSE 120
Query: 135 ILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+L+HQPS GQA++I+ H+ + K K++LN I+ G+ E +E ++RDH M+A
Sbjct: 121 VLIHQPSISGGLQGQATEIKIHSDWMDKTKQKLNRIFSDLTGQPLETIEHDMERDHYMTA 180
Query: 193 SEACDWGVVDKVLMSR 208
A D+G+VD +L R
Sbjct: 181 EGAKDYGIVDDILTHR 196
>gi|219113871|ref|XP_002186519.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583369|gb|ACI65989.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 223
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 110/190 (57%), Positives = 150/190 (78%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP+V+E GERS+DIYSRLL+ERI+ V G++ DHMA+L+ AQLLFLEAE+P+K + +Y
Sbjct: 19 VPIVLESGALGERSFDIYSRLLRERIICVHGEVSDHMASLVTAQLLFLEAEHPEKPVYMY 78
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG+VTAGMA+YDTMQ+I+P + T CMGQAASMGSLLL+ G G RFALPN+RI+LH
Sbjct: 79 INSPGGLVTAGMAMYDTMQYIRPDVHTICMGQAASMGSLLLAGGTPGCRFALPNSRIMLH 138
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+DI+ A++I++ + LN +YV + G+ E+E+ +DRD+ + +A +
Sbjct: 139 QPSGGAQGMAADIDIQAREILRTRANLNRLYVHHTGQELSEIERVMDRDYFLDVHQAKKF 198
Query: 199 GVVDKVLMSR 208
GV+D+VL R
Sbjct: 199 GVIDQVLDKR 208
>gi|322387412|ref|ZP_08061022.1| ATP-dependent Clp protease, protease subunit [Streptococcus
infantis ATCC 700779]
gi|321141941|gb|EFX37436.1| ATP-dependent Clp protease, protease subunit [Streptococcus
infantis ATCC 700779]
Length = 196
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ K +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKSVEQIHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
D+G +D+++ +
Sbjct: 181 LDYGFIDEIMANNS 194
>gi|309800003|ref|ZP_07694203.1| Clp protease [Streptococcus infantis SK1302]
gi|308116402|gb|EFO53878.1| Clp protease [Streptococcus infantis SK1302]
Length = 196
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKSVEQIHADAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|256028615|ref|ZP_05442449.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
D11]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|22653693|sp|Q8RHJ8|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
Length = 193
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 103/190 (54%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ + ER+YDIYSRLLK+RI+FV I++ +A I AQLL+LEAE+P+K+I +YI
Sbjct: 4 PTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VT GMAIYDTM +IKP + T C+GQAASMG+ LL+AG KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
Query: 140 PSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GQA+DI HA +++KIK RL E+ KN GKT E++ + +RD+ +S+ EA +
Sbjct: 124 PLISGGLKGQATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVN 183
Query: 198 WGVVDKVLMS 207
+G++D V
Sbjct: 184 YGLIDSVFRR 193
>gi|75907528|ref|YP_321824.1| ATP-dependent Clp protease proteolytic subunit [Anabaena variabilis
ATCC 29413]
gi|115311345|sp|Q3MDK7|CLPP2_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|75701253|gb|ABA20929.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 197
Score = 206 bits (524), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G+ IY RL +ERI+F+ ++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG+VT+G+AIYDTMQ IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DIE A++I++I+ +LN+IY N + ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++D+V+ R
Sbjct: 181 QEAKEYGLIDRVIEER 196
>gi|320547331|ref|ZP_08041622.1| ATP-dependent Clp protease, protease subunit [Streptococcus equinus
ATCC 9812]
gi|320448029|gb|EFW88781.1| ATP-dependent Clp protease, protease subunit [Streptococcus equinus
ATCC 9812]
Length = 196
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N G+T E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRQNLEQILADNSGQTLEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++++
Sbjct: 181 LEYGFIDEIMVNNE 194
>gi|228470612|ref|ZP_04055469.1| Clp protease [Porphyromonas uenonis 60-3]
gi|228307739|gb|EEK16715.1| Clp protease [Porphyromonas uenonis 60-3]
Length = 221
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 140/199 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P ++E+ D++SRL+ +RI+F+ ++ D+ A +I AQLL+L+ +P K+IS+
Sbjct: 17 INPTIIEERQLNVAQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISI 76
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG IYDTMQ++ +ST C G AASM ++LL AG +G R+ALP++R+++
Sbjct: 77 YINSPGGSVYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMI 136
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K+K L +I + G++ EE+E+ DRD M+ASEA +
Sbjct: 137 HQPMGGMQGQASDIEIAAKEILKVKAELYKIIADHSGRSVEEIERDSDRDKWMTASEALE 196
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++DKVL S ++ K
Sbjct: 197 YGMIDKVLTSTKQTAKEKK 215
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
Length = 193
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 102/190 (53%), Positives = 141/190 (74%), Gaps = 2/190 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ + ER+YDIYSRLLK+RI+FV I++ +A I AQLL+LEAE+P+K+I +YI
Sbjct: 4 PTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VT GMAIYDTM +IKP + T C+GQAASMG+ LL+AG KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQ 123
Query: 140 PSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GQA+DI HA +++KIK +L E+ KN GKT E++ + +RD+ +S+ EA +
Sbjct: 124 PLISGGLKGQATDISIHANELLKIKDKLAELLAKNTGKTKEQILRDTERDNYLSSEEAVN 183
Query: 198 WGVVDKVLMS 207
+G++D V
Sbjct: 184 YGLIDSVFRR 193
>gi|55820449|ref|YP_138891.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
thermophilus LMG 18311]
gi|55822333|ref|YP_140774.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
thermophilus CNRZ1066]
gi|116627271|ref|YP_819890.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
thermophilus LMD-9]
gi|67460179|sp|Q5M1A8|CLPP_STRT1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460181|sp|Q5M5U4|CLPP_STRT2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122268126|sp|Q03M78|CLPP_STRTD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|55736434|gb|AAV60076.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus
thermophilus LMG 18311]
gi|55738318|gb|AAV61959.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus
thermophilus CNRZ1066]
gi|116100548|gb|ABJ65694.1| ATP-dependent Clp protease proteolytic subunit ClpP [Streptococcus
thermophilus LMD-9]
gi|312277759|gb|ADQ62416.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
thermophilus ND03]
Length = 196
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/192 (49%), Positives = 137/192 (71%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG IED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPIEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G+ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQPIEKVHVDAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMTN 192
>gi|312218146|emb|CBX98092.1| similar to ATP-dependent clp protease proteolytic subunit
[Leptosphaeria maculans]
Length = 206
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 108/204 (52%), Positives = 155/204 (75%), Gaps = 3/204 (1%)
Query: 16 LGL-VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ L +P V E T G ++ DI+SRLL+ERI+ + G+++D M+ AQLLFLEA+NP+K
Sbjct: 1 MSLPIPYVTETTGGGWKTSDIFSRLLQERIICLNGEVDDFMSANCVAQLLFLEADNPEKP 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG V+AG+AIYDTM +I+ P+ST CMG AASMGSLLL+ G +G R+ LP+AR
Sbjct: 61 ISMYINSPGGSVSAGLAIYDTMNYIRSPVSTICMGIAASMGSLLLAGGAEGHRYILPHAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK-TYEEVEKTLDRDHIMSA 192
+++HQPSGG+ G+ASDI HA++I++I+ +LN+IY + K T EE+EK ++RD+ M A
Sbjct: 121 VMIHQPSGGYRGKASDIADHAKEILRIRDKLNKIYQSHVTKKRTLEEIEKYMERDYFMDA 180
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
EA D+G+VDK+L R ++ +
Sbjct: 181 QEAVDFGIVDKILEKREAPSKEGE 204
>gi|315221928|ref|ZP_07863839.1| Clp protease [Streptococcus anginosus F0211]
gi|319939597|ref|ZP_08013956.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
anginosus 1_2_62CV]
gi|315188894|gb|EFU22598.1| Clp protease [Streptococcus anginosus F0211]
gi|319811186|gb|EFW07492.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
anginosus 1_2_62CV]
Length = 196
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 99/194 (51%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YINTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K + L +I N GKT ++V K +RD+ MSA E
Sbjct: 121 HQPMGGTGSGTQQTDMAIAAEHLLKTRNNLEKILADNSGKTIKQVHKDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
D+G +D+++ +
Sbjct: 181 LDYGFIDEIMANNN 194
>gi|225867968|ref|YP_002743916.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus equi
subsp. zooepidemicus]
gi|225871117|ref|YP_002747064.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus equi
subsp. equi 4047]
gi|254763801|sp|C0M7M8|CLPP_STRE4 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|259585965|sp|C0MGT5|CLPP_STRS7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225700521|emb|CAW94984.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus equi subsp. equi 4047]
gi|225701244|emb|CAW98203.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus equi subsp. zooepidemicus]
Length = 196
Score = 206 bits (523), Expect = 2e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + RL +I +N GKT +++ K +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LAYGFIDEIMENNE 194
>gi|146321407|ref|YP_001201118.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
98HAH33]
gi|223933328|ref|ZP_03625316.1| Endopeptidase Clp [Streptococcus suis 89/1591]
gi|253752247|ref|YP_003025388.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus suis SC84]
gi|253754073|ref|YP_003027214.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
P1/7]
gi|253756007|ref|YP_003029147.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
BM407]
gi|330833177|ref|YP_004402002.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
ST3]
gi|166214715|sp|A4W2X9|CLPP_STRS2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|145692213|gb|ABP92718.1| putative ATP-dependent protease proteolytic subunit [Streptococcus
suis 98HAH33]
gi|223897978|gb|EEF64351.1| Endopeptidase Clp [Streptococcus suis 89/1591]
gi|251816536|emb|CAZ52172.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus suis SC84]
gi|251818471|emb|CAZ56300.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus suis BM407]
gi|251820319|emb|CAR46838.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus suis P1/7]
gi|292558838|gb|ADE31839.1| ATP-dependent Clp protease, proteolytic subunit [Streptococcus suis
GZ1]
gi|319758636|gb|ADV70578.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
JS14]
gi|329307400|gb|AEB81816.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
ST3]
Length = 196
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 140/192 (72%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++P K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDPTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGTAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + +L +I N GKT +++ K +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNKLEKILADNSGKTVKQIHKDAERDYWMSAEET 180
Query: 196 CDWGVVDKVLMS 207
+G +D+++ +
Sbjct: 181 LAYGFIDQIMDN 192
>gi|307324650|ref|ZP_07603856.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
gi|306889532|gb|EFN20512.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
Length = 201
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GER+YDIYSRLL ERI+F+ +I+D +A ++ AQLL LE+ + ++EI++Y
Sbjct: 6 IPTVVERTTQGERAYDIYSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSSSEQEIAIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F+ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVSAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP G G SD+ A+++++I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 126 QPVSGGQQGTVSDLSLQAKEMLRIRSQVEEVLARHTPHDAATLRADMDRDKVFTAREAVT 185
Query: 198 WGVVDKVLMSRI 209
+G+ D+VL R
Sbjct: 186 YGLADEVLSRRA 197
>gi|52082177|ref|YP_080968.1| ATP-dependent protease proteolytic subunit [Bacillus licheniformis
ATCC 14580]
gi|52787568|ref|YP_093397.1| hypothetical protein BLi03890 [Bacillus licheniformis ATCC 14580]
gi|319648053|ref|ZP_08002270.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
BT1B_CT2]
gi|67460467|sp|Q65E10|CLPP2_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|52005388|gb|AAU25330.1| ATP-dependentprotease proteolytic subunit (class III heat-shock
protein) [Bacillus licheniformis ATCC 14580]
gi|52350070|gb|AAU42704.1| hypothetical protein BLi03890 [Bacillus licheniformis ATCC 14580]
gi|317389688|gb|EFV70498.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
BT1B_CT2]
Length = 190
Score = 206 bits (523), Expect = 3e-51, Method: Composition-based stats.
Identities = 91/190 (47%), Positives = 137/190 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+E+T GERSYDI+SRLLK+RI+ + + D +A + AQLLFL AE+ +K+I
Sbjct: 1 MNTIPYVIEKTAAGERSYDIFSRLLKDRIIMIGSEFNDDLANRVTAQLLFLSAEDNEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
S+YINSPGG +AG AI DTM ++KP + T C+G AASMG++LL+ G KG R+AL N+ I
Sbjct: 61 SIYINSPGGSTSAGYAILDTMDYVKPDVRTICVGMAASMGAILLAGGAKGKRYALKNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D+E A+ I+K++ ++ + + G+ E+++ ++RD+ M A EA
Sbjct: 121 MIHQPLGGVKGQATDMEISAKRIIKLREKIERFFHERTGQPIEKLKADMERDYFMDADEA 180
Query: 196 CDWGVVDKVL 205
+GV+D VL
Sbjct: 181 KAYGVIDAVL 190
>gi|15674537|ref|NP_268711.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes M1 GAS]
gi|19745547|ref|NP_606683.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS8232]
gi|21909823|ref|NP_664091.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS315]
gi|28896484|ref|NP_802834.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes SSI-1]
gi|50913700|ref|YP_059672.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
gi|71910142|ref|YP_281692.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS5005]
gi|94987959|ref|YP_596060.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS9429]
gi|94989833|ref|YP_597933.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10270]
gi|94991844|ref|YP_599943.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS2096]
gi|94993720|ref|YP_601818.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10750]
gi|139474337|ref|YP_001129053.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes str. Manfredo]
gi|209558883|ref|YP_002285355.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes NZ131]
gi|251781853|ref|YP_002996155.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|306827931|ref|ZP_07461198.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
gi|56748646|sp|Q5XDM4|CLPP_STRP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56749808|sp|P69884|CLPP_STRP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56749809|sp|P69885|CLPP_STRP3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56749810|sp|P69886|CLPP_STRP8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243170|sp|Q1JDA9|CLPP_STRPB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243171|sp|Q1JN83|CLPP_STRPC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243172|sp|Q1JID4|CLPP_STRPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243173|sp|Q1J887|CLPP_STRPF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214714|sp|A2RG72|CLPP_STRPG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706550|sp|B5XJZ8|CLPP_STRPZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13621642|gb|AAK33432.1| putative ATP-dependent protease proteolytic subunit [Streptococcus
pyogenes M1 GAS]
gi|19747668|gb|AAL97182.1| putative ATP-dependent protease proteolytic subunit [Streptococcus
pyogenes MGAS8232]
gi|21904009|gb|AAM78894.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pyogenes MGAS315]
gi|28811738|dbj|BAC64667.1| putative ATP-dependent protease proteolytic subunit [Streptococcus
pyogenes SSI-1]
gi|50902774|gb|AAT86489.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
gi|71852924|gb|AAZ50947.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS5005]
gi|94541467|gb|ABF31516.1| ATP-dependent endopeptidase clp proteolytic subunit [Streptococcus
pyogenes MGAS9429]
gi|94543341|gb|ABF33389.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus pyogenes MGAS10270]
gi|94545352|gb|ABF35399.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus pyogenes MGAS2096]
gi|94547228|gb|ABF37274.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus pyogenes MGAS10750]
gi|134272584|emb|CAM30851.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus pyogenes str. Manfredo]
gi|209540084|gb|ACI60660.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes NZ131]
gi|242390482|dbj|BAH80941.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
dysgalactiae subsp. equisimilis GGS_124]
gi|304429850|gb|EFM32892.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
gi|322411198|gb|EFY02106.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
dysgalactiae subsp. dysgalactiae ATCC 27957]
gi|323126667|gb|ADX23964.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
dysgalactiae subsp. equisimilis ATCC 12394]
Length = 196
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + RL +I +N GKT +++ K +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LAYGFIDEIMENNE 194
>gi|306825611|ref|ZP_07458950.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus sp.
oral taxon 071 str. 73H25AP]
gi|304431972|gb|EFM34949.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus sp.
oral taxon 071 str. 73H25AP]
Length = 196
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GKT E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKTVEQIHVDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 200
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 140/199 (70%), Gaps = 5/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++++P
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVSDGIANRIVALLLYLDSDDPN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
ARI++HQP GG QA+DIE A +I++I+ +LN++ CG++ E++EK DRD+ M
Sbjct: 121 ARIMIHQPLGGTGGRRQATDIEIEANEILRIRAQLNQLLADQCGQSLEKIEKDTDRDYFM 180
Query: 191 SASEACDWGVVDKVLMSRI 209
SA EA ++G++DKV+ +
Sbjct: 181 SAEEAKEYGLIDKVIDEKS 199
>gi|319946500|ref|ZP_08020736.1| ATP-dependent Clp protease, protease subunit [Streptococcus
australis ATCC 700641]
gi|319747331|gb|EFV99588.1| ATP-dependent Clp protease, protease subunit [Streptococcus
australis ATCC 700641]
Length = 196
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ VTG +ED MA I AQLLFL+A++ K+I +
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMVTGPVEDQMANSIIAQLLFLDAQDNTKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + RL +I +N G+T +++ +RD+ M+A E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAENSGQTLKKIHADAERDNWMTAEET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LAYGFIDEIMSNNN 194
>gi|21225557|ref|NP_631336.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
coelicolor A3(2)]
gi|256783423|ref|ZP_05521854.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
lividans TK24]
gi|289767299|ref|ZP_06526677.1| Clp protease [Streptomyces lividans TK24]
gi|18203601|sp|Q9X7S0|CLPP4_STRCO RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|4835315|emb|CAB42937.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces coelicolor A3(2)]
gi|289697498|gb|EFD64927.1| Clp protease [Streptomyces lividans TK24]
Length = 200
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 89/191 (46%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EI++Y
Sbjct: 6 IPNVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAVY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++V+I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 126 QPASGGRQGTVSDLALQAKEMVRIRSQVEEVLARHTHHDVATLRADMDRDKVFTAQEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLARR 196
>gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|3023511|sp|P74467|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 202
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 96/196 (48%), Positives = 142/196 (72%), Gaps = 4/196 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A LL+L++++P
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL++G G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QA+DI+ A++I++I+++LNEI + G+T E++ K DRD+ +S
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAREILRIRQQLNEIMAQRTGQTVEKIAKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMS 207
A+EA ++G++DKV+ +
Sbjct: 181 AAEAKEYGLIDKVIEN 196
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 205 bits (522), Expect = 3e-51, Method: Composition-based stats.
Identities = 95/182 (52%), Positives = 136/182 (74%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
DIYSRLLK+RIVF+ I D +A I AQLLFL+ E+P+K+I++YINSPGG VT+GMAI
Sbjct: 1 MDIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAI 60
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YDTM F+ +ST+C+G AASMG++LL+ G KG R+ALPN+R+++HQPSGG GQASDI
Sbjct: 61 YDTMNFLSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRVMIHQPSGGAGGQASDIS 120
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A++I++ + LN++ + G++ E ++K DRD+ M++ EA ++GV+DKV
Sbjct: 121 IQAKEIIRWRETLNKVLAEKTGQSVERIQKDSDRDYWMTSQEALEYGVIDKVYSGNQSKS 180
Query: 213 EK 214
+K
Sbjct: 181 DK 182
>gi|312081179|ref|XP_003142917.1| hypothetical protein LOAG_07336 [Loa loa]
gi|307761922|gb|EFO21156.1| hypothetical protein LOAG_07336 [Loa loa]
Length = 218
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 107/186 (57%), Positives = 141/186 (75%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PMVV+Q R ER YDIYSRLLK+RIV V I D +A + AQLLFL+ E+ + I++Y
Sbjct: 26 IPMVVDQDGRVERVYDIYSRLLKDRIVCVMTPINDQVAASVIAQLLFLQGESAKSTINMY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I PGG VTAG+ IYDTMQ+I P++T+C+GQAASMGSLLLSAG KGMR +LPNARI++H
Sbjct: 86 IMCPGGSVTAGLGIYDTMQYISAPVATWCIGQAASMGSLLLSAGAKGMRTSLPNARIMVH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG GQASDI A++I ++K RLN+IY + G+ + +E+ LDRD MS EA +
Sbjct: 146 QPSGGAEGQASDILIRAEEIGRLKTRLNKIYAIHTGQDIKIIEEALDRDRYMSPEEAKQF 205
Query: 199 GVVDKV 204
G++D++
Sbjct: 206 GIIDQI 211
>gi|257077641|ref|ZP_05572002.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis JH1]
gi|256985671|gb|EEU72973.1| ATP-dependent Clp protease proteolytic subunit [Enterococcus
faecalis JH1]
Length = 176
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 96/176 (54%), Positives = 137/176 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQ++RGER+YDIYSRLLK+RI+ ++G I+D++A + AQLLFL+A++ +K+I
Sbjct: 1 MNLIPTVIEQSSRGERAYDIYSRLLKDRIIMLSGPIDDNVANSVIAQLLFLDAQDSEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AI+DTM F+K + T +G AASMGS LL+AG+KG RFALPNA I
Sbjct: 61 YLYINSPGGSVSAGLAIFDTMNFVKADVQTIVLGMAASMGSFLLTAGQKGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++HQP GG GQA++IE A+ I+ ++RLN I + G+ E +E+ DRD+ M+
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILDTRQRLNSILAERTGQPIEVIERDTDRDNYMT 176
>gi|157151545|ref|YP_001450909.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
gordonii str. Challis substr. CH1]
gi|262283203|ref|ZP_06060970.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus sp.
2_1_36FAA]
gi|189082471|sp|A8AYP9|CLPP_STRGC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157076339|gb|ABV11022.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
gordonii str. Challis substr. CH1]
gi|262261455|gb|EEY80154.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus sp.
2_1_36FAA]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++ L +I N GKT E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRKTLEQILADNSGKTVEQIHADAERDYWMSAEET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LAYGFIDEIMANNN 194
>gi|302556967|ref|ZP_07309309.1| Clp protease [Streptomyces griseoflavus Tu4000]
gi|302474585|gb|EFL37678.1| Clp protease [Streptomyces griseoflavus Tu4000]
Length = 200
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/191 (49%), Positives = 136/191 (71%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T RGERSYD++SRLL ERIVF+ +I+D +A ++ AQLL LE+ P+ EI+LY
Sbjct: 6 IPNVVERTPRGERSYDVFSRLLSERIVFLGTEIDDGVANVVIAQLLHLESAAPESEIALY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G G ASD+ A+++V+I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 126 QPASGGTRGTASDLALRAREMVRIRSQVEEVLARHTHHDPATLRADMDRDKVFTAREAVS 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLARR 196
>gi|312862980|ref|ZP_07723219.1| endopeptidase Clp [Streptococcus vestibularis F0396]
gi|322517397|ref|ZP_08070271.1| ATP-dependent Clp protease, protease subunit [Streptococcus
vestibularis ATCC 49124]
gi|311101475|gb|EFQ59679.1| endopeptidase Clp [Streptococcus vestibularis F0396]
gi|322123995|gb|EFX95551.1| ATP-dependent Clp protease, protease subunit [Streptococcus
vestibularis ATCC 49124]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 138/192 (71%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQSIEKVHVDAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMTN 192
>gi|186681465|ref|YP_001864661.1| ATP-dependent Clp protease proteolytic subunit [Nostoc punctiforme
PCC 73102]
gi|186463917|gb|ACC79718.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 203
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 99/199 (49%), Positives = 142/199 (71%), Gaps = 3/199 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G+ IY RL +ERI+F+ I+D +A I A +L+L++++P
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSDDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG+VT+GMAI+DTMQ IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DIE A++I++I+ +LN IY G+T ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNGIYADKTGQTIAKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSRIDI 211
EA ++G++D+V+ R I
Sbjct: 181 EEAKEYGLIDRVIEERTSI 199
>gi|225856422|ref|YP_002737933.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae P1031]
gi|254763806|sp|C1CJJ5|CLPP_STRZP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|225724460|gb|ACO20312.1| Clp protease [Streptococcus pneumoniae P1031]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAHET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|329116784|ref|ZP_08245501.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Streptococcus parauberis NCFD 2020]
gi|326907189|gb|EGE54103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Streptococcus parauberis NCFD 2020]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K ++RL +I N GKT + + + +RD+ M A E
Sbjct: 121 HQPMGGAGNGTQQSDMAIVAEQLLKTRKRLEKILADNSGKTIKVIHRDAERDYWMDAKET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LAYGFIDEIMENNS 194
>gi|239932975|ref|ZP_04689928.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
ghanaensis ATCC 14672]
gi|291441328|ref|ZP_06580718.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
ghanaensis ATCC 14672]
gi|291344223|gb|EFE71179.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
ghanaensis ATCC 14672]
Length = 201
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 136/191 (71%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GERSYD++SRLL ERIVF+ +I+D +A ++ AQLL LE+ P+ EI++Y
Sbjct: 7 IPNVVERTAQGERSYDVFSRLLSERIVFLGTEIDDGVANVVIAQLLHLESAAPESEIAIY 66
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG VT+ MAIYDTM F++ P+STFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 67 LNSPGGSVTSLMAIYDTMTFVQAPVSTFCIGQAASTAAVLLAGGDPGRRFVLEHARVLLG 126
Query: 139 QPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G G SD+ AQ++V+I+ ++ E+ ++ + +DRD + +A EA
Sbjct: 127 QPATGGARGTVSDLSLRAQEMVRIRSQVEEVLSRHTHHDVATLRADMDRDKVFTAQEAVA 186
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 187 YGLADEVLTRR 197
>gi|254495062|ref|ZP_05107986.1| Clp protease [Polaribacter sp. MED152]
gi|85819412|gb|EAQ40569.1| Clp protease [Polaribacter sp. MED152]
Length = 219
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 98/205 (47%), Positives = 139/205 (67%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + L P ++E+ D++SRL+ +RI+F+ I D +A +I AQL
Sbjct: 15 HGISSTSYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+IS+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++L+ AGE
Sbjct: 75 LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R ALP++RI++HQP GG GQASDIE A++I+K+K L I + G+T E+V
Sbjct: 135 KGKRSALPHSRIMIHQPLGGAQGQASDIEITAREILKLKDELYAIIANHSGQTVEKVHND 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSR 208
DRD+ M A EA ++G++D+VL +
Sbjct: 195 SDRDYWMKADEAKEYGMIDEVLARK 219
>gi|228476630|ref|ZP_04061312.1| Clp protease [Streptococcus salivarius SK126]
gi|228251825|gb|EEK10890.1| Clp protease [Streptococcus salivarius SK126]
Length = 196
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 137/192 (71%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G+ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQPIEKVHVDAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMAN 192
>gi|288920828|ref|ZP_06415126.1| Endopeptidase Clp [Frankia sp. EUN1f]
gi|288347787|gb|EFC82066.1| Endopeptidase Clp [Frankia sp. EUN1f]
Length = 214
Score = 205 bits (521), Expect = 4e-51, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 145/199 (72%), Gaps = 2/199 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P ++E+T+RGE D YS+LLKERIVF+ I+D A + AQLLFLE+E+
Sbjct: 10 PQSRY--VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGAPIDDTSANDVMAQLLFLESED 67
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++IS+YINSPGG T+ AIYDTMQF++P I T CMGQAAS ++LL+AG G RFAL
Sbjct: 68 PDRDISIYINSPGGSFTSLTAIYDTMQFVRPDIQTICMGQAASAAAVLLAAGTPGKRFAL 127
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
N+RIL+HQPS GQ+SDIE A++I++++ L + ++ G+ E++ K ++RD I+
Sbjct: 128 QNSRILIHQPSAQGEGQSSDIEIQAREILRMRTLLERMLAEHTGRNEEDIRKDIERDKIL 187
Query: 191 SASEACDWGVVDKVLMSRI 209
S+ EA ++G++D+V+ +R
Sbjct: 188 SSEEAKEYGLIDEVIKTRK 206
>gi|297197434|ref|ZP_06914831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
gi|197716282|gb|EDY60316.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
Length = 200
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 132/191 (69%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T GERS D++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EIS+Y
Sbjct: 6 IPYVVERTAHGERSSDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESAAPENEISIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM +++ PIST C+GQAAS ++LL+ G+ G R L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTYVQAPISTLCVGQAASTAAVLLAGGDPGRRLVLEHARVLLG 125
Query: 139 QPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G S A D+ A+++V+I+ ++ E+ ++ + +DRD + +A EA +
Sbjct: 126 QPAAGGSRGAISDLALQAKEMVRIRSQVEEVLARHTHHDIATLRADMDRDKVFTAEEAVE 185
Query: 198 WGVVDKVLMSR 208
+G+ D+V+ R
Sbjct: 186 YGLADEVVSRR 196
>gi|257463897|ref|ZP_05628283.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
D12]
gi|317061426|ref|ZP_07925911.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
D12]
gi|313687102|gb|EFS23937.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
D12]
Length = 195
Score = 205 bits (521), Expect = 5e-51, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 140/192 (72%), Gaps = 3/192 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ R ER +DI+SRLL++RI+F+ ++ D +A + AQLL+LEAE+P K+I LYI
Sbjct: 4 PTVIDNDGRQERHFDIFSRLLRDRIIFLGTEVNDQVAASLVAQLLYLEAEDPTKDIILYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V+AG+AIYDTM ++KP I T C+GQAASMG+ LL+AG KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVSAGLAIYDTMNYVKPDIQTVCIGQAASMGAFLLAAGTKGKRFALENSRIMIHQ 123
Query: 140 PSGGF---SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
P GG QA+D++ A+++ K +L I KN GK+ EEV + +RD+ ++A EA
Sbjct: 124 PLGGTGSGYHQATDVQIIAKELQATKEKLAGIIAKNTGKSKEEVLEDTERDNYLTAEEAV 183
Query: 197 DWGVVDKVLMSR 208
+G++D V+ +R
Sbjct: 184 KYGLIDMVMKAR 195
>gi|312864716|ref|ZP_07724947.1| endopeptidase Clp [Streptococcus downei F0415]
gi|311099843|gb|EFQ58056.1| endopeptidase Clp [Streptococcus downei F0415]
Length = 196
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 93/194 (47%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RIV +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIVMLTGPVEDNMANSIIAQLLFLDAQDSSKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LP+A ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPHAEYMI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ +++ + L +I N G+T +++ +RD+ M+A E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEHLLQTRETLEKILADNSGQTLKKIHADAERDNWMTAKET 180
Query: 196 CDWGVVDKVLMSRI 209
D+G +D+++ +
Sbjct: 181 LDYGFIDEIMENNE 194
>gi|301167838|emb|CBW27423.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Bacteriovorax marinus SJ]
Length = 202
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 140/192 (72%), Gaps = 2/192 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+EQT RGER YDIYSRLL +RIVF+ Q+ D +A LI AQ+LFLE ++P I YI
Sbjct: 11 PIVIEQTARGERQYDIYSRLLLDRIVFLGTQVNDTVANLIMAQMLFLETDDPDAPIHFYI 70
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V AG+ IYD MQ+I P+ T+C+G AASMGSLLL+AG +G R+++P++RI++HQ
Sbjct: 71 NSPGGSVYAGLGIYDVMQYISCPVHTYCVGLAASMGSLLLTAGAEGHRYSMPHSRIMIHQ 130
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACD 197
P GG GQ SDI+ A++I +K +LN IY+K+ K + +++ DRD+ +S +EA +
Sbjct: 131 PLGGAQGQCSDIQIQAKEIQDLKDQLNGIYIKHSAKEMSMDKIVAATDRDNYLSPTEAIE 190
Query: 198 WGVVDKVLMSRI 209
G++D ++ +
Sbjct: 191 LGIIDHIIEKKK 202
>gi|322391649|ref|ZP_08065117.1| ATP-dependent Clp protease, protease subunit [Streptococcus peroris
ATCC 700780]
gi|321145460|gb|EFX40853.1| ATP-dependent Clp protease, protease subunit [Streptococcus peroris
ATCC 700780]
Length = 196
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K ++ L +I N GK+ E++ +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEHLLKTRKNLEQILADNSGKSVEQIHVDAERDYWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNS 194
>gi|322385045|ref|ZP_08058695.1| ATP-dependent Clp protease, protease subunit [Streptococcus
cristatus ATCC 51100]
gi|321270955|gb|EFX53865.1| ATP-dependent Clp protease, protease subunit [Streptococcus
cristatus ATCC 51100]
Length = 202
Score = 204 bits (520), Expect = 5e-51, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 7 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 67 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 126
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K +R L +I N GK+ E++ +RD+ MSA E
Sbjct: 127 HQPMGGTGGGTQQTDMAIAAEHLLKTRRTLEQILADNSGKSVEQIHADAERDYWMSAQET 186
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 187 LEYGFIDEIMANNN 200
>gi|237739236|ref|ZP_04569717.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
Length = 193
Score = 204 bits (520), Expect = 6e-51, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 140/190 (73%), Gaps = 2/190 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ + ER+YDIYSRLLK+RI+FV I++++A I AQLL+LE+E+P+K+I +YI
Sbjct: 4 PTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VT GMAIYDTM +IKP + T C+GQAASMG+ LLS+G KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQ 123
Query: 140 PSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GQA+DI HA +++KIK RL E+ +N GKT E++ +RD+ +S+ EA
Sbjct: 124 PLISGGLKGQATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVR 183
Query: 198 WGVVDKVLMS 207
+G++D V
Sbjct: 184 YGLIDSVFKR 193
>gi|302532652|ref|ZP_07284994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
gi|302441547|gb|EFL13363.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
Length = 200
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 136/192 (70%), Gaps = 1/192 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ NP++EIS+Y
Sbjct: 6 VPYVIERTTQGERSYDVFSRLLNERIIFLGTEIDDGVANVVIAQLLHLESANPEQEISIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 LNSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLRHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++V+I+ ++ E+ ++ + +DR+ + +A EA
Sbjct: 126 QPASGGRQGTVSDLSLAAKEMVRIRSQVEEVLSRHTHHDAATLRADMDREKVFTAEEAVA 185
Query: 198 WGVVDKVLMSRI 209
+G+ D+VL R
Sbjct: 186 YGLADEVLSRRS 197
>gi|296270440|ref|YP_003653072.1| endopeptidase Clp [Thermobispora bispora DSM 43833]
gi|296093227|gb|ADG89179.1| Endopeptidase Clp [Thermobispora bispora DSM 43833]
Length = 215
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 138/193 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 15 VLPSFVERTSYGVKEMNPYNKLFEDRIIFLGVQIDDASANDVMAQLLTLESLDPDRDISI 74
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF++P I T C+GQAAS ++LL+ G G RFALPNAR+L+
Sbjct: 75 YINSPGGSFTAMTAIYDTMQFVRPDIQTVCLGQAASAAAVLLAGGTPGKRFALPNARVLI 134
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GQ SDIE A++I++++ L EI K+ GK+ E++ K ++RD I++A EA +
Sbjct: 135 HQPYTEGGGQGSDIEIQAREILRMRSLLEEIIAKHTGKSPEQIRKDIERDKILTAQEAKE 194
Query: 198 WGVVDKVLMSRID 210
+G+VD ++ SR
Sbjct: 195 YGLVDDIIPSRKK 207
>gi|195978714|ref|YP_002123958.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus equi
subsp. zooepidemicus MGCS10565]
gi|195975419|gb|ACG62945.1| ATP-dependent Clp protease proteolytic subunit ClpP [Streptococcus
equi subsp. zooepidemicus MGCS10565]
Length = 207
Score = 204 bits (519), Expect = 6e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 12 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 71
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 72 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 131
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + RL +I +N GKT +++ K +RD+ MSA E
Sbjct: 132 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 191
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 192 LAYGFIDEIMENNE 205
>gi|71902983|ref|YP_279786.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS6180]
gi|110816467|sp|Q48V25|CLPP_STRPM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|71802078|gb|AAX71431.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS6180]
Length = 196
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 140/194 (72%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + RL +I +N GKT +++ K +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LTYGFIDEIMENNE 194
>gi|170592242|ref|XP_001900878.1| Probable ClpP-like protease [Brugia malayi]
gi|158591745|gb|EDP30349.1| Probable ClpP-like protease, putative [Brugia malayi]
Length = 218
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 111/193 (57%), Positives = 144/193 (74%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PMVV+Q R ER YDIYSRLLK+RIV V I D +A I AQLLFL+ E+ + I++Y
Sbjct: 26 IPMVVDQDGRIERVYDIYSRLLKDRIVCVMTSINDQVAASIIAQLLFLQGESAKSTINMY 85
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I PGG VTAG+ IYDTMQ+I P++T+C+GQAASMGSLLLSAG KGMR +LPNARI++H
Sbjct: 86 IMCPGGSVTAGLGIYDTMQYISAPVATWCIGQAASMGSLLLSAGAKGMRTSLPNARIMVH 145
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG GQASDI A++I ++K RLN+IY + G+ E +E+ LDRD MS EA +
Sbjct: 146 QPSGGAEGQASDILIRAEEIGRLKTRLNKIYAVHTGQDIETIEEVLDRDRYMSPEEAKQF 205
Query: 199 GVVDKVLMSRIDI 211
G++D++ S D+
Sbjct: 206 GIIDQIETSAFDL 218
>gi|158317029|ref|YP_001509537.1| ATP-dependent Clp protease proteolytic subunit [Frankia sp.
EAN1pec]
gi|158112434|gb|ABW14631.1| Endopeptidase Clp [Frankia sp. EAN1pec]
Length = 214
Score = 204 bits (519), Expect = 7e-51, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 142/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P ++E+T+RGE D YS+LLKERIVF+ I+D A + AQLLFLE+E+P ++IS+
Sbjct: 15 VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGAPIDDTSANDVMAQLLFLESEDPDRDISI 74
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P I T CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 75 YINSPGGSFTSLTAIYDTMQFVRPDIQTICMGQAASAAAVLLAAGTPGKRFALQNSRILI 134
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SDIE A++I++++ L + ++ G+T E V K ++RD I SA EA D
Sbjct: 135 HQPSAQGEGQSSDIEIQAREILRMRSLLEHMLAEHTGRTEEAVRKDIERDKIFSADEAKD 194
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ +R
Sbjct: 195 YGIIDEVIKTRK 206
>gi|256420340|ref|YP_003120993.1| endopeptidase Clp [Chitinophaga pinensis DSM 2588]
gi|256035248|gb|ACU58792.1| Endopeptidase Clp [Chitinophaga pinensis DSM 2588]
Length = 234
Score = 204 bits (519), Expect = 8e-51, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 137/201 (68%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L P ++E+ D++SRL+ +RI+F+ + D++A +I AQLLFLE+ + ++
Sbjct: 30 INALTPNIIEERPMNMAIMDVFSRLMMDRIIFMGDPVNDYVANIITAQLLFLESTDRTRD 89
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I +YINSPGG V AG+ IYDTMQ I P ++T C G AAS G++LL AG KG R AL +AR
Sbjct: 90 IQMYINSPGGSVYAGLGIYDTMQIIAPDVATICTGMAASFGAVLLVAGTKGKRTALKHAR 149
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++HQP GG GQ SDIE A++ VK+K+ LNEI +CG+ ++VEK DRD+ M+A E
Sbjct: 150 VMIHQPHGGAEGQTSDIEITAREFVKLKKELNEIIATHCGQPVKKVEKDSDRDYWMTADE 209
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++D VL ++++
Sbjct: 210 AKEYGIIDDVLTRNPRKQQEN 230
>gi|262201987|ref|YP_003273195.1| endopeptidase Clp [Gordonia bronchialis DSM 43247]
gi|262085334|gb|ACY21302.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247]
Length = 227
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/200 (45%), Positives = 134/200 (67%), Gaps = 2/200 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +E T G+R YD Y++L +ERIVFV I+ +A + AQLL LE+++P ++I++
Sbjct: 28 ILPQFIEHTPNGQRQYDPYAKLFEERIVFVGTPIDQTVANDVMAQLLVLESQDPDRDITM 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V +AIYDTMQ++ I T C+G+AAS ++LL+ G G R ALPNA IL+
Sbjct: 88 YINSPGGSVPDMLAIYDTMQYVHCDIVTVCLGEAASAAAILLAGGTPGKRAALPNATILI 147
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP + GQ SD+E A +I +I+ RL+EI + G+ E++ K DRD+I++A A
Sbjct: 148 HQPRTGGAYQGQVSDLEIQAAEIERIRNRLDEILAGHTGQPAEKIRKDTDRDNILTAEAA 207
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G+VD+V R +KS
Sbjct: 208 KEYGIVDEVFEYRKKSLKKS 227
>gi|255944899|ref|XP_002563217.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587952|emb|CAP86021.1| Pc20g06920 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 258
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 107/199 (53%), Positives = 148/199 (74%), Gaps = 4/199 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E +YDI+SRL+KERI+ + GQ++D ++ I AQLLFLEA+NP K I LY
Sbjct: 49 TPFVTETVGGSWHTYDIFSRLMKERIICLNGQVDDTLSASIVAQLLFLEADNPSKPIHLY 108
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I P+ST C+GQAASMGSLLL+ GE G R+ LP++ I++H
Sbjct: 109 INSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASMGSLLLAGGEAGKRYCLPHSSIMVH 168
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASE 194
QPSGG+ GQASDI HA++I++++ +LNEIY ++ K + +E+EK ++RD+ M A E
Sbjct: 169 QPSGGYFGQASDIAIHAKEILRVRTQLNEIYQRHLTSKKKLSLDEIEKLMERDYFMGAKE 228
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A + GVVD++L R+ +E
Sbjct: 229 ALELGVVDEILDRRVQGKE 247
>gi|229496588|ref|ZP_04390302.1| Clp protease [Porphyromonas endodontalis ATCC 35406]
gi|229316485|gb|EEN82404.1| Clp protease [Porphyromonas endodontalis ATCC 35406]
Length = 228
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 133/191 (69%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ D++SRL+ +RI+F+ ++D+ A +I AQLLFL++ +P K+IS+YI
Sbjct: 35 PTIIEERQLNVAQMDVFSRLMMDRIIFLGAGVDDYTANVIQAQLLFLDSSDPGKDISIYI 94
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V AG IYDTMQ+I +ST C G AASM ++LL AG G RFALP++R+++HQ
Sbjct: 95 NSPGGSVYAGYGIYDTMQYISCDVSTICTGMAASMAAVLLVAGSHGKRFALPHSRVMIHQ 154
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQASDIE A++I+++K L +I ++ G+ E +E+ DRD M+A EA +G
Sbjct: 155 PLGGMQGQASDIEIAAKEILRVKGELYKIISEHSGQPLEVIERDSDRDKWMTAEEAQAYG 214
Query: 200 VVDKVLMSRID 210
++DKVL +
Sbjct: 215 MIDKVLSPKPK 225
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
Length = 193
Score = 204 bits (518), Expect = 8e-51, Method: Composition-based stats.
Identities = 101/190 (53%), Positives = 140/190 (73%), Gaps = 2/190 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ + ER+YDIYSRLLK+RI+FV I++++A I AQLL+LE+E+P+K+I +YI
Sbjct: 4 PTVIDNNGKSERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VT GMAIYDTM +IKP + T C+GQAASMG+ LLS+G KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVTDGMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQ 123
Query: 140 PSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GQA+DI HA +++KIK RL E+ +N GKT E++ +RD+ +S+ EA
Sbjct: 124 PLISGGLKGQATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVR 183
Query: 198 WGVVDKVLMS 207
+G++D V
Sbjct: 184 YGLIDSVFRR 193
>gi|332177296|gb|AEE12986.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
asaccharolytica DSM 20707]
Length = 238
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 140/199 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P ++E+ D++SRL+ +RI+F+ ++ D+ A +I AQLL+L+ +P K+IS+
Sbjct: 34 INPTIIEERQLNVAQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISI 93
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG IYDTMQ++ +ST C G AASM ++LL AG +G R+ALP++R+++
Sbjct: 94 YINSPGGSVYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMI 153
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K+K L +I + G++ E++E+ DRD M+ASEA +
Sbjct: 154 HQPMGGMQGQASDIEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALE 213
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++DKVL S + + K
Sbjct: 214 YGMIDKVLTSTKQVAKDKK 232
>gi|222152607|ref|YP_002561782.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
uberis 0140J]
gi|254763804|sp|B9DTU8|CLPP_STRU0 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222113418|emb|CAR41093.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus uberis 0140J]
Length = 196
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 96/194 (49%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG D+ A+ ++K ++RL +I N GKT +++ K +RD+ M A E
Sbjct: 121 HQPMGGTGSGTQQTDMAIVAEQLLKTRKRLEKILSDNSGKTIKQIHKDAERDYWMDAKET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D ++ +
Sbjct: 181 LEYGFIDAIMENNE 194
>gi|313885801|ref|ZP_07819544.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
gi|312924705|gb|EFR35471.1| endopeptidase Clp [Porphyromonas asaccharolytica PR426713P-I]
Length = 238
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 139/197 (70%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ D++SRL+ +RI+F+ ++ D+ A +I AQLL+L+ +P K+IS+YI
Sbjct: 36 PTIIEERQLNVAQMDVFSRLMMDRIIFLGTEVNDYTANVIQAQLLYLDNADPGKDISIYI 95
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V AG IYDTMQ++ +ST C G AASM ++LL AG +G R+ALP++R+++HQ
Sbjct: 96 NSPGGSVYAGFGIYDTMQYVGCDVSTMCTGMAASMAAVLLVAGAEGKRYALPHSRVMIHQ 155
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQASDIE A++I+K+K L +I + G++ E++E+ DRD M+ASEA ++G
Sbjct: 156 PMGGMQGQASDIEIAAKEILKVKAELYKIIADHSGRSVEDIERDSDRDKWMTASEALEYG 215
Query: 200 VVDKVLMSRIDIEEKSK 216
++DKVL S + + K
Sbjct: 216 MIDKVLTSTKQVAKDKK 232
>gi|166368459|ref|YP_001660732.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|159028168|emb|CAO89775.1| clpP [Microcystis aeruginosa PCC 7806]
gi|166090832|dbj|BAG05540.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
Length = 199
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 138/198 (69%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E+ IYSRL ERI+F+ ++ D +A + AQ+L+L++E+P
Sbjct: 1 MPIGVPKVPYRLPGSQYEQWISIYSRLSVERILFLGQEVTDGLANALVAQMLYLDSEDPT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL++G G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVVTICVGLAASMGAFLLASGSPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QA+DI+ A++I++I+++LNEI G+T E +EK DRD+ +S
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAKEILRIRQQLNEIMANRTGQTIERIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G++DKV+ R
Sbjct: 181 AEEAVAYGLIDKVVEGRP 198
>gi|296423577|ref|XP_002841330.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637567|emb|CAZ85521.1| unnamed protein product [Tuber melanosporum]
Length = 242
Score = 204 bits (518), Expect = 9e-51, Method: Composition-based stats.
Identities = 104/197 (52%), Positives = 143/197 (72%), Gaps = 2/197 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G SYDI+SRLLKERI+ + G + D ++ ++ AQLLFLEAENP+K+I+LY
Sbjct: 42 TPFVHESVGGGWHSYDIFSRLLKERIICLNGPVHDGISAVVVAQLLFLEAENPEKQINLY 101
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P+ST C+GQAASMGSLLL G KG R+ALP+A +++H
Sbjct: 102 INSPGGSVTAGLAIYDTMNYIQAPVSTICIGQAASMGSLLLCGGTKGKRYALPHASVMVH 161
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT--YEEVEKTLDRDHIMSASEAC 196
QPS + SDI HA++I++++ RLN IY K+ K ++EK ++RD M A EA
Sbjct: 162 QPSILMTKGNSDIAIHAKEILRVRERLNIIYQKHLTKPHTLAQIEKIMERDLFMGAEEAK 221
Query: 197 DWGVVDKVLMSRIDIEE 213
+ G+VD++L++R E
Sbjct: 222 EMGLVDEILVARKKSSE 238
>gi|284036063|ref|YP_003385993.1| endopeptidase Clp [Spirosoma linguale DSM 74]
gi|283815356|gb|ADB37194.1| Endopeptidase Clp [Spirosoma linguale DSM 74]
Length = 229
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 137/193 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ V+E+ R D++SRL+ +RI+F+ ++D++A +I AQLLFLE+ +P+K+I
Sbjct: 37 NMTRSVIEERPMNFREVDVFSRLMADRIIFMGLPVDDNIANIIVAQLLFLESADPKKDIL 96
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V AG+ IYDTMQ+++P ++T C AASMG++LL+ G G R ALP+AR++
Sbjct: 97 MYLNSPGGSVYAGLGIYDTMQYVRPDVATVCTSLAASMGAVLLAGGAAGKRSALPHARVM 156
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ+ DIE A++IVK++ L EI + GKT EE+EK DRD M A EA
Sbjct: 157 IHQPSGGAQGQSVDIEITAREIVKLRVELYEILAHHSGKTVEEIEKDSDRDKWMRAEEAK 216
Query: 197 DWGVVDKVLMSRI 209
++G++D+VL
Sbjct: 217 EYGLIDEVLRREK 229
>gi|117927946|ref|YP_872497.1| ATP-dependent Clp protease proteolytic subunit [Acidothermus
cellulolyticus 11B]
gi|117648409|gb|ABK52511.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidothermus
cellulolyticus 11B]
Length = 236
Score = 204 bits (518), Expect = 1e-50, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 142/192 (73%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP E+T++G+R ++ Y++L +ERI+F+ QI+D A + AQLL LE+ +P ++I L
Sbjct: 33 IVPEFRERTSQGDRIHNPYTKLFEERIIFLGVQIDDISANDVMAQLLTLESMDPDRDIQL 92
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQFI+P + T CMGQAAS ++LL+AG KG R ALPN+RIL+
Sbjct: 93 YINSPGGSFTALTAIYDTMQFIRPEVQTICMGQAASAAAVLLAAGTKGKRMALPNSRILI 152
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GQASD+E A+++++++R L + K+ G++ E++ + ++RD I++A EA +
Sbjct: 153 HQPYSEAGGQASDLEIAAREVLRMRRLLEHLLAKHTGRSEEQIRQDIERDKILTAEEAVE 212
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ +R
Sbjct: 213 YGIIDEVITTRK 224
>gi|126348113|emb|CAJ89834.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces ambofaciens ATCC 23877]
Length = 200
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EI++Y
Sbjct: 6 IPSVVERTPQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAVY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 INSPGGSFTSLMAIYDTMTFVQAPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++V+I+ ++ E+ ++ + +DRD + SA EA
Sbjct: 126 QPASGGRQGTVSDLALQAKEMVRIRAQVEEVLARHTHHDVTTLRADMDRDKVFSAEEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL R
Sbjct: 186 YGLADEVLGRR 196
>gi|328948166|ref|YP_004365503.1| ATP-dependent Clp protease proteolytic subunit [Treponema
succinifaciens DSM 2489]
gi|328448490|gb|AEB14206.1| ATP-dependent Clp protease proteolytic subunit [Treponema
succinifaciens DSM 2489]
Length = 203
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 97/199 (48%), Positives = 143/199 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E++ GER+YD+YSRLLK+RI+FV G+I D A LI AQ+L+LE+ENP
Sbjct: 2 NEFMNTLIPTVIERSGNGERAYDLYSRLLKDRIIFVDGEIRDETADLIVAQILYLESENP 61
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K+IS+YINSPGG VTAG+AIYDTMQ+++ I T CMGQAASMG+++L+ G G R+ALP
Sbjct: 62 EKDISMYINSPGGSVTAGLAIYDTMQYVRCDIQTICMGQAASMGAIILAGGTIGKRYALP 121
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++R+++HQP GG GQ SDI A++I ++K+ + GK E + ++RD M
Sbjct: 122 SSRVMIHQPWGGTQGQESDIAIQAKEIGRLKKLSIKYLSMQTGKKEEVIAADMERDFYMP 181
Query: 192 ASEACDWGVVDKVLMSRID 210
A +A ++G++D ++ S
Sbjct: 182 AEDAKNYGIIDHIMNSAKK 200
>gi|61680536|pdb|1Y7O|A Chain A, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680537|pdb|1Y7O|B Chain B, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680538|pdb|1Y7O|C Chain C, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680539|pdb|1Y7O|D Chain D, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680540|pdb|1Y7O|E Chain E, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680541|pdb|1Y7O|F Chain F, The Structure Of Streptococcus Pneumoniae A153p Clpp
gi|61680542|pdb|1Y7O|G Chain G, The Structure Of Streptococcus Pneumoniae A153p Clpp
Length = 218
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 87/189 (46%), Positives = 130/189 (68%), Gaps = 2/189 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+ A + AQLLFL+A++ K+I L
Sbjct: 21 MIPVVIEQTSRGERSYDIYSRLLKDRIIXLTGPVEDNXANSVIAQLLFLDAQDSTKDIYL 80
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DT FIK + T G AAS G+++ S+G KG RF LPNA +
Sbjct: 81 YVNTPGGSVSAGLAIVDTXNFIKADVQTIVXGXAASXGTVIASSGAKGKRFXLPNAEYXI 140
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ + ++K + L +I +N G++ E+V +RD+ SA E
Sbjct: 141 HQPXGGTGGGTQQTDMAIAPEHLLKTRNTLEKILAENSGQSXEKVHADAERDNWXSAQET 200
Query: 196 CDWGVVDKV 204
++G +D++
Sbjct: 201 LEYGFIDEI 209
>gi|34540241|ref|NP_904720.1| ATP-dependent Clp protease proteolytic subunit [Porphyromonas
gingivalis W83]
gi|60389708|sp|Q7MX09|CLPP_PORGI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34396553|gb|AAQ65619.1| ATP-dependent Clp protease, proteolytic subunit [Porphyromonas
gingivalis W83]
Length = 222
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
+ A D + + P ++E+ D++SRL+ +RI+F+ QI+D+ A +I
Sbjct: 12 IGLNAQALDDYTRIQSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQIDDYTANVI 71
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL+L++ +P K+IS+Y+NSPGG V AG IYDTMQ+I ++T C G AASM S+LL
Sbjct: 72 QAQLLYLDSADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLL 131
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG KG RFALP++R+++HQP GG GQASD+E A++I+++K+ L I + GK E+
Sbjct: 132 VAGTKGKRFALPHSRVMIHQPLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVEQ 191
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
VEK DRD+ M+A EA ++G++DK+L
Sbjct: 192 VEKDSDRDYWMTAPEALEYGMIDKILEKNRK 222
>gi|15672655|ref|NP_266829.1| ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. lactis Il1403]
gi|281491135|ref|YP_003353115.1| ATP-dependent endopeptidase Clp proteolytic subunit ClpP
[Lactococcus lactis subsp. lactis KF147]
gi|18202801|sp|Q9CHQ3|CLPP_LACLA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|12723580|gb|AAK04771.1|AE006300_6 ATP-dependent Clp protease proteolytic subunit [Lactococcus lactis
subsp. lactis Il1403]
gi|281374885|gb|ADA64404.1| ATP-dependent endopeptidase Clp, proteolytic subunit ClpP
[Lactococcus lactis subsp. lactis KF147]
gi|326406161|gb|ADZ63232.1| ATP-dependent Clp protease, protease subunit [Lactococcus lactis
subsp. lactis CV56]
Length = 199
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
LVP V+EQ++RGER+YDIYSRLLK+RI+ +TG +ED MA I AQLLFL+A++ K+I L
Sbjct: 4 LVPTVIEQSSRGERAYDIYSRLLKDRIIMLTGPVEDGMANSIIAQLLFLDAQDNTKDIYL 63
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 64 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYLI 123
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K ++RL +I N ++ E++ K +RDH M A E
Sbjct: 124 HQPMGGTGQGTQQTDMAIVAEQLLKTRKRLEQILADNSNRSLEQIHKDAERDHWMDAKET 183
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 184 LEYGFIDEIMENNS 197
>gi|86741462|ref|YP_481862.1| ATP-dependent Clp protease proteolytic subunit [Frankia sp. CcI3]
gi|86568324|gb|ABD12133.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2
peptidase. Serine peptidase. MEROPS family S14 [Frankia
sp. CcI3]
Length = 224
Score = 203 bits (517), Expect = 1e-50, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 144/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +VE+T+RGE S D YS+LLKERIVF+ QI+D A + AQLLFLE+E+P ++IS+
Sbjct: 23 VLPNIVERTSRGEYSMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISI 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 83 YINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILI 142
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SDIE A++I++++ + ++ G+T E+ + +RD I SA EA +
Sbjct: 143 HQPSAQGEGQSSDIEIQAREILRVRALQETMLARHTGRTETEIRRDTERDKIFSADEAEE 202
Query: 198 WGVVDKVLMSRI 209
+G++D+V+MSR
Sbjct: 203 YGLIDEVIMSRK 214
>gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 198
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/197 (50%), Positives = 144/197 (73%), Gaps = 3/197 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E+ IY RL +ERI+F++ +++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWIGIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL+AG KG R ALPN
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGMAASMGAFLLAAGTKGKRLALPN 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG GQA+DIE A++I++I++ LNE+ + G+T E++EK DRD+ MSA
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSA 180
Query: 193 SEACDWGVVDKVLMSRI 209
+EA ++G++D+V+ R
Sbjct: 181 AEAHEYGLIDQVIEERS 197
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 137/199 (68%), Gaps = 5/199 (2%)
Query: 16 LGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q +IY RL +ERI+F+ + D +A I A +L+L++E+P
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWINIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+ IK + T C+G AASMG+ LLSAG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+RI++HQP GG QA+DI+ A++I++IK +LNE+ + G++ E++EK DRD+ M
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIDIEAKEIIRIKHQLNELMAAHTGQSIEKIEKDTDRDYFM 180
Query: 191 SASEACDWGVVDKVLMSRI 209
SA EA ++G++DKV+ R
Sbjct: 181 SAQEALEYGLIDKVIEERP 199
>gi|116515217|ref|YP_802846.1| hypothetical protein BCc_293 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|116257071|gb|ABJ90753.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease,
heat shock protein F21.5 [Buchnera aphidicola str. Cc
(Cinara cedri)]
Length = 200
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 153/195 (78%), Gaps = 1/195 (0%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
KK ++ L+P V+E+TN GERSYDI+S+LLKERI+F+TG I+D++A+++ +Q+LFLE
Sbjct: 5 KKKNQQKNNLLIPFVIEKTNHGERSYDIFSKLLKERIIFITGIIDDNIASIVISQILFLE 64
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+EN +K+I +YINSPGG++T+G++IYDTMQF++P I+T C+GQA ++LL +G KG R
Sbjct: 65 SENKKKDIFIYINSPGGIITSGLSIYDTMQFVQPKINTICIGQAV-YAAILLCSGNKGKR 123
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F+LP+ARI+LHQP GGF GQASDI HAQ+I KIK+ +N + + + ++++K +RD
Sbjct: 124 FSLPHARIMLHQPLGGFKGQASDIMIHAQEIKKIKKIINNLLSYHTKQPIKKIKKDTERD 183
Query: 188 HIMSASEACDWGVVD 202
+ SA EA +G++D
Sbjct: 184 YFFSAQEAIKYGLID 198
>gi|88801527|ref|ZP_01117055.1| ATP-dependent Clp protease proteolytic subunit 2 [Polaribacter
irgensii 23-P]
gi|88782185|gb|EAR13362.1| ATP-dependent Clp protease proteolytic subunit 2 [Polaribacter
irgensii 23-P]
Length = 220
Score = 203 bits (516), Expect = 1e-50, Method: Composition-based stats.
Identities = 98/206 (47%), Positives = 140/206 (67%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + L P ++E+ D++SRL+ +RI+F+ I D +A +I AQL
Sbjct: 15 HGISSTNYTKITSSLTPYIMEERQMNITQMDVFSRLMMDRIIFLGTGINDQVANIIQAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+IS+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++L+ AGE
Sbjct: 75 LFLESVDANKDISIYINSPGGGVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLMCAGE 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R ALP++RI++HQP GG GQASDIE A++I+K+K L I + G++ E+V K
Sbjct: 135 KGKRSALPHSRIMIHQPLGGAQGQASDIEITAREIMKLKDELYAIIASHSGQSIEKVHKD 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ M A EA +G++D+VL +
Sbjct: 195 SDRDYWMKADEAKVYGMIDEVLERKK 220
>gi|17231849|ref|NP_488397.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759069|sp|Q8YP43|CLPP3_ANASP RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|17133493|dbj|BAB76056.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 197
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 141/196 (71%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G+ IY RL +ERI+F+ ++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG+VT+G+AIYDTMQ IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DIE A++I++I+ +LN+IY N + ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++D+V+ R
Sbjct: 181 QEAMEYGLIDRVIEER 196
>gi|322390033|ref|ZP_08063570.1| ATP-dependent Clp protease, protease subunit [Streptococcus
parasanguinis ATCC 903]
gi|321143263|gb|EFX38704.1| ATP-dependent Clp protease, protease subunit [Streptococcus
parasanguinis ATCC 903]
Length = 196
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 138/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ VTG +ED MA I AQLLFL+A++ K+I +
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMVTGPVEDQMANSIIAQLLFLDAQDNTKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YINTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEKILAENSGQSIEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNK 194
>gi|312868210|ref|ZP_07728410.1| endopeptidase Clp [Streptococcus parasanguinis F0405]
gi|311095955|gb|EFQ54199.1| endopeptidase Clp [Streptococcus parasanguinis F0405]
Length = 196
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/194 (48%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ VTG +ED MA I AQLLFL+A++ K+I +
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMVTGPVEDQMANSIIAQLLFLDAQDNTKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YINTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I +N G++ ++V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEKILAENSGQSIKKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++++
Sbjct: 181 LEYGFIDEIMVNNK 194
>gi|124007704|ref|ZP_01692407.1| Clp protease [Microscilla marina ATCC 23134]
gi|123986826|gb|EAY26598.1| Clp protease [Microscilla marina ATCC 23134]
Length = 195
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/195 (48%), Positives = 136/195 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P ++E+ R D++SRL+ +RI+F+ ++D++A +I AQLLFLE+ + +K+I L
Sbjct: 1 MTPNIIEERPVNFRPIDVFSRLISDRIIFLGTAVDDNVANVITAQLLFLESVDAKKDILL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQ++ P I+T C G AAS G++LL+ G G R AL +ARI++
Sbjct: 61 YINSPGGSVYAGLGIYDTMQYVGPDIATICTGMAASFGAVLLTGGAPGKRSALEHARIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A+ V +KR LNEI K+CGKT E++E DRD + A A +
Sbjct: 121 HQPHGGAQGQASDIEITAKQYVLLKRELNEIIAKHCGKTPEQLEADGDRDFWLKADAAKE 180
Query: 198 WGVVDKVLMSRIDIE 212
+G++D+VL+ +
Sbjct: 181 YGLIDEVLVRSSKTD 195
>gi|302549887|ref|ZP_07302229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
gi|302467505|gb|EFL30598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
Length = 211
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 81/206 (39%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ ++P E+T G+R+ D YS+LL+ERIVF+ +++ A + AQ ++LE
Sbjct: 1 MTRPSARY--VLPEFTERTGSGQRTMDPYSKLLEERIVFLGTPVDETSANDVMAQFMYLE 58
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
P ++ISLYINSPGG A A+YDTMQ+I + T C+GQA + S+LL+AG G R
Sbjct: 59 HHAPDRDISLYINSPGGTFHAMTALYDTMQYINCDVETVCLGQAGAAASMLLAAGTPGKR 118
Query: 128 FALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
LP+AR+++HQP GQASD+ A ++++I+ R+ E+ ++ G+T E+V ++
Sbjct: 119 SVLPDARLVIHQPALPEPVHGQASDLAIQADELMRIRTRMEEMLARHTGRTREQVSADIE 178
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD I++A EA ++G+VD+++ +R
Sbjct: 179 RDKILTAQEAVEYGLVDRIVPNRKAT 204
>gi|322373950|ref|ZP_08048485.1| Clp protease [Streptococcus sp. C150]
gi|321277322|gb|EFX54392.1| Clp protease [Streptococcus sp. C150]
Length = 196
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 94/192 (48%), Positives = 138/192 (71%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQSIEKVHIDAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMAN 192
>gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 198
Score = 203 bits (516), Expect = 2e-50, Method: Composition-based stats.
Identities = 98/196 (50%), Positives = 139/196 (70%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + ER DIY+RL +ERI+F+ ++ D +A I A +L+L++++P
Sbjct: 1 MPIGVPSVPYRLPGSQYERWVDIYTRLNQERIIFLGQEVTDGLANRIVASMLYLDSDDPN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL++G G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG GQASDIE A++I++I+ LN I + ++ E+VEK DRD+ +SA
Sbjct: 121 ARIMIHQPMGGTRGQASDIEIEAREILRIRSLLNSILAERAHQSIEKVEKDTDRDYFLSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G+VD+V+ R
Sbjct: 181 EEAREYGLVDQVIEER 196
>gi|284929271|ref|YP_003421793.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809715|gb|ADB95412.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 198
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 138/198 (69%), Gaps = 4/198 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + ER DIY+RL +ERI+F++ ++ D +A I A LL+L++E+
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLSQEVTDGIANRIVALLLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAI+DTMQ+I+ + T C+G AASMGS LL+AG G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIFDTMQYIRSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QASDIE A +I++I+ +LN I CG+ E++EK DRD+ +S
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNNILATKCGQPLEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA ++G++D+V+ R
Sbjct: 181 AEEAKNYGLIDQVIEERT 198
>gi|119512063|ref|ZP_01631157.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463289|gb|EAW44232.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 197
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 97/197 (49%), Positives = 142/197 (72%), Gaps = 3/197 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G+ IY RL +ERI+F+ ++D +A I A +L+L++++P
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG+VT+GMAI+DTMQ IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQASDIE A++I++I+ +LN IY + G+ ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNGIYAEKTGQDISKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSRI 209
+EA ++G++D+V+ R
Sbjct: 181 AEAKEYGLIDRVIEERP 197
>gi|544044|sp|P36398|CLPP_STRSL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|347999|gb|AAA26891.1| ATP-dependent protease proteolytic subunit [Streptococcus
salivarius]
Length = 196
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 93/192 (48%), Positives = 136/192 (70%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGE SYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGEASYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G+ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEQILADNSGQPIEKVHVDAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMS 207
++G +D+++ +
Sbjct: 181 LEYGFIDEIMAN 192
>gi|169625037|ref|XP_001805923.1| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15]
gi|160705586|gb|EAT76880.2| hypothetical protein SNOG_15785 [Phaeosphaeria nodorum SN15]
Length = 228
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 109/208 (52%), Positives = 153/208 (73%), Gaps = 2/208 (0%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F ++ +P V E G ++ DI+SRLL+ERI+ + G++ED M+ ++ AQ
Sbjct: 11 FPSHQEQRQSPQAFSPIPYVTESMGGGFKTSDIFSRLLQERIITLNGEVEDSMSAVVIAQ 70
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFLEAENP+K IS+YINSPGG V+AG+AIYDTM +I+ P+ST CMG AASMGSLLL+ G
Sbjct: 71 LLFLEAENPEKPISMYINSPGGSVSAGLAIYDTMNYIRSPVSTTCMGMAASMGSLLLAGG 130
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEV 180
E G R+ LP+AR+++HQPSGG+ G+ASDI HA++I++I+ RLN IY + K T EE+
Sbjct: 131 EPGQRYILPHARVMIHQPSGGYRGKASDIADHAKEILRIRDRLNRIYQNHLTKERTLEEI 190
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSR 208
EK ++RD+ M A EA ++G+VDK++ R
Sbjct: 191 EKYMERDYYMDAEEAVEFGIVDKIMEKR 218
>gi|311900307|dbj|BAJ32715.1| putative ATP-dependent Clp protease proteolytic subunit
[Kitasatospora setae KM-6054]
Length = 198
Score = 202 bits (515), Expect = 2e-50, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 134/191 (70%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T +GERSYD++SRLL ERIVF+ +I+D +A ++ AQLL LE+ +P +EI++Y
Sbjct: 6 IPYVIERTAQGERSYDVFSRLLNERIVFLGTEIDDGVANVVIAQLLHLESASPDEEIAIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG T+ MAIYD M F++ PI+T+C+GQAAS ++LL+ G+ G R L ++R+LL
Sbjct: 66 LNSPGGSFTSLMAIYDAMTFVRCPIATYCVGQAASTAAVLLAGGDPGRRSVLRHSRVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++++I+ ++ E+ ++ G + +DR+ + A EA
Sbjct: 126 QPASGGRRGTVSDLSLAAKEVLRIRAQVEEVLSRHTGHPVATLRADMDREKVFGADEAVA 185
Query: 198 WGVVDKVLMSR 208
+G+ D+VL +R
Sbjct: 186 YGLADRVLNNR 196
>gi|296876039|ref|ZP_06900095.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
parasanguinis ATCC 15912]
gi|296432950|gb|EFH18741.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
parasanguinis ATCC 15912]
Length = 196
Score = 202 bits (514), Expect = 2e-50, Method: Composition-based stats.
Identities = 95/194 (48%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ VTG +ED MA I AQLLFL+A++ K+I +
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMVTGPVEDQMANSIIAQLLFLDAQDNTKDIYM 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YINTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G Q +D+ A+ ++K + L +I N G++ E+V +RD+ MSA E
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLKTRNNLEKILANNSGQSIEKVHADAERDNWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
++G +D+++ +
Sbjct: 181 LEYGFIDEIMANNK 194
>gi|167757344|ref|ZP_02429471.1| hypothetical protein CLORAM_02894 [Clostridium ramosum DSM 1402]
gi|237735579|ref|ZP_04566060.1| ATP-dependent Clp protease proteolytic subunit [Mollicutes
bacterium D7]
gi|167703519|gb|EDS18098.1| hypothetical protein CLORAM_02894 [Clostridium ramosum DSM 1402]
gi|229381324|gb|EEO31415.1| ATP-dependent Clp protease proteolytic subunit [Coprobacillus sp.
D7]
Length = 190
Score = 202 bits (514), Expect = 3e-50, Method: Composition-based stats.
Identities = 98/190 (51%), Positives = 137/190 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E+TN+ E +YDIYSRLL++RI+ +TG I+D M++ I QLL+LE+ + +I
Sbjct: 1 MHLVPTVIEKTNQREYAYDIYSRLLEDRIILLTGTIDDKMSSSIVGQLLYLESLDNNADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG + AGMAIYDTM FIK +ST +G AASM + LLSAG KG R +LPN+ I
Sbjct: 61 FMYINSPGGSINAGMAIYDTMNFIKCDVSTIVIGMAASMAAFLLSAGAKGKRCSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G F GQASDIE A+ I+K K +LN I KN + +++ DRDH + EA
Sbjct: 121 MIHQPLGAFEGQASDIEISAKRILKQKEKLNLILSKNTNQPIDKIVIDTDRDHFLEPDEA 180
Query: 196 CDWGVVDKVL 205
++G++D+V+
Sbjct: 181 LEYGLIDEVI 190
>gi|188995413|ref|YP_001929665.1| putative ATP-dependent Clp protease proteolytic subunit
[Porphyromonas gingivalis ATCC 33277]
gi|188595093|dbj|BAG34068.1| putative ATP-dependent Clp protease proteolytic subunit
[Porphyromonas gingivalis ATCC 33277]
Length = 222
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
+ A D + + P ++E+ D++SRL+ +RI+F+ QI+D+ A +I
Sbjct: 12 IGLNAQALDDYTRIQSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQIDDYTANVI 71
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL+L++ +P K+IS+Y+NSPGG V AG IYDTMQ+I ++T C G AASM S+LL
Sbjct: 72 QAQLLYLDSADPGKDISIYLNSPGGSVYAGYGIYDTMQYIGCDVATICTGMAASMASVLL 131
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG KG RFALP++R+++HQP GG GQASD+E A++I+++K+ L I + GK ++
Sbjct: 132 VAGTKGKRFALPHSRVMIHQPLGGMQGQASDLEIAAREILRVKKELYTIISSHSGKPVKQ 191
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
VEK DRD+ M+A EA ++G++DK+L
Sbjct: 192 VEKDSDRDYWMTAPEALEYGMIDKILEKNRK 222
>gi|258655306|ref|YP_003204462.1| endopeptidase Clp [Nakamurella multipartita DSM 44233]
gi|258558531|gb|ACV81473.1| Endopeptidase Clp [Nakamurella multipartita DSM 44233]
Length = 203
Score = 202 bits (513), Expect = 3e-50, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 135/191 (70%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E+T GER D++SRLL +RI+++ +I+D +A +I AQLL LE++NP EI LY
Sbjct: 6 VPTVIERTPAGERVVDVFSRLLSDRIIYLGTEIDDDVANVIVAQLLHLESDNPDAEIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG ++A A+YDTMQF++ P++T C+GQAAS ++LL+AG G R LP+ R+LLH
Sbjct: 66 INSPGGSMSAMTAVYDTMQFVRAPVATTCVGQAASAAAILLAAGAPGRRAVLPHTRVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS G GQ SD+ A+++++++ ++ ++ ++ G+ + + DRD + +A +A +
Sbjct: 126 QPSTGGEGQISDLTLQARELLRVREQMEQVLARHTGQDVATLRRDTDRDKVFTAEQAVAY 185
Query: 199 GVVDKVLMSRI 209
G+ D ++ +R
Sbjct: 186 GLADLIVSARP 196
>gi|307705249|ref|ZP_07642116.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
SK597]
gi|307621198|gb|EFO00268.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus mitis
SK597]
Length = 202
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 93/200 (46%), Positives = 139/200 (69%), Gaps = 8/200 (4%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL------FLEAENP 71
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLL FL+A++
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQVFLDAQDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LP
Sbjct: 61 TKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLP 120
Query: 132 NARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
NA ++HQP G Q +D+ A+ ++K + L +I +N G++ E+V +RD+
Sbjct: 121 NAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRNTLEKILAENSGQSIEKVHADAERDNW 180
Query: 190 MSASEACDWGVVDKVLMSRI 209
MSA E ++G +D+++ +
Sbjct: 181 MSAQETLEYGFIDEIMANNS 200
>gi|22537725|ref|NP_688576.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
agalactiae 2603V/R]
gi|25011674|ref|NP_736069.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
agalactiae NEM316]
gi|76787269|ref|YP_330203.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
agalactiae A909]
gi|76799155|ref|ZP_00781338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae 18RS21]
gi|77407096|ref|ZP_00784096.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae H36B]
gi|77411373|ref|ZP_00787720.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae CJB111]
gi|60389783|sp|Q8DYA5|CLPP_STRA5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60389787|sp|Q8E3X0|CLPP_STRA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109878422|sp|Q3JZV0|CLPP_STRA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22534615|gb|AAN00449.1|AE014264_4 ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae 2603V/R]
gi|22091680|emb|CAC88188.1| ClpP serine protease [Streptococcus agalactiae]
gi|24413214|emb|CAD47293.1| ATP-dependent CLP protease proteolytic subunit [Streptococcus
agalactiae NEM316]
gi|76562326|gb|ABA44910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae A909]
gi|76585485|gb|EAO62060.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae 18RS21]
gi|77162546|gb|EAO73510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae CJB111]
gi|77174291|gb|EAO77160.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
agalactiae H36B]
Length = 196
Score = 202 bits (513), Expect = 4e-50, Method: Composition-based stats.
Identities = 97/194 (50%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TGQ+ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K + L +I N G++ E+V +RD MSA E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQSIEKVHDDAERDRWMSAQET 180
Query: 196 CDWGVVDKVLMSRI 209
D+G +D ++ +
Sbjct: 181 LDYGFIDAIMENNN 194
>gi|167754483|ref|ZP_02426610.1| hypothetical protein ALIPUT_02779 [Alistipes putredinis DSM 17216]
gi|167659108|gb|EDS03238.1| hypothetical protein ALIPUT_02779 [Alistipes putredinis DSM 17216]
Length = 221
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 96/200 (48%), Positives = 139/200 (69%), Gaps = 1/200 (0%)
Query: 10 DSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D + V P ++E+ + D++SRL+ +RI+F+ I D A +I AQLLFLE+
Sbjct: 21 DFRSQYAAYVSPTIIEERQLNVATMDVFSRLMMDRIIFLGAPIYDDAANIIQAQLLFLES 80
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+P+K+I +YINSPGG VTAG+ IYDTMQ ++P ++T C G AASMG++LL+AG G R
Sbjct: 81 ADPEKDIQIYINSPGGSVTAGLGIYDTMQLVQPDVATICTGLAASMGAVLLTAGAAGKRS 140
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
ALP++R+++HQP GG GQASDIE A++I K K+ L EI + G E++EK DRD+
Sbjct: 141 ALPHSRVMIHQPLGGAQGQASDIEITAREIRKTKQELYEIIAAHSGAPIEKIEKDADRDY 200
Query: 189 IMSASEACDWGVVDKVLMSR 208
+SA EA ++G++D+VL R
Sbjct: 201 WLSAREAKEYGLIDEVLTKR 220
>gi|111221349|ref|YP_712143.1| ATP-dependent Clp protease proteolytic subunit [Frankia alni
ACN14a]
gi|111148881|emb|CAJ60560.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Frankia alni ACN14a]
Length = 226
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 99/200 (49%), Positives = 145/200 (72%), Gaps = 2/200 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + ++P ++E+T+RGE D YS+LLKERIVF+ QI+D A + AQLLFLE+E
Sbjct: 21 QPQGRY--VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESE 78
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++IS+YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFA
Sbjct: 79 DPDRDISIYINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFA 138
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
L N+RIL+HQPS GQ+SDIE A++I++++ L + + G+ E++ K ++RD I
Sbjct: 139 LENSRILIHQPSAQGEGQSSDIEIQAREILRMRSLLERMLATHTGRKEEDIRKDIERDKI 198
Query: 190 MSASEACDWGVVDKVLMSRI 209
SA EA ++G++D+V+ +R
Sbjct: 199 FSADEAKEYGLIDEVIKTRK 218
>gi|290579971|ref|YP_003484363.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus mutans NN2025]
gi|254996870|dbj|BAH87471.1| putative ATP-dependent Clp protease proteolytic subunit
[Streptococcus mutans NN2025]
Length = 196
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YINSPGGSVSAGLAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K +++L +I N GKT +++ K +RD+ M A E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEKILSDNSGKTVKQIHKDAERDYWMDAKET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LKYGFIDEIMENNE 194
>gi|108935917|sp|Q2J9A9|CLPP3_FRASC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 213
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 102/192 (53%), Positives = 144/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +VE+T+RGE S D YS+LLKERIVF+ QI+D A + AQLLFLE+E+P ++IS+
Sbjct: 12 VLPNIVERTSRGEYSMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISI 71
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 72 YINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILI 131
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SDIE A++I++++ + ++ G+T E+ + +RD I SA EA +
Sbjct: 132 HQPSAQGEGQSSDIEIQAREILRVRALQETMLARHTGRTETEIRRDTERDKIFSADEAEE 191
Query: 198 WGVVDKVLMSRI 209
+G++D+V+MSR
Sbjct: 192 YGLIDEVIMSRK 203
>gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460521|sp|Q7VAR9|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 200
Score = 201 bits (512), Expect = 4e-50, Method: Composition-based stats.
Identities = 94/199 (47%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LLSAG K R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK LN + G+ +E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA D+G++DKV+ +
Sbjct: 181 AKEAKDYGLIDKVISHPNE 199
>gi|257452229|ref|ZP_05617528.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
3_1_5R]
gi|257465976|ref|ZP_05630287.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
gonidiaformans ATCC 25563]
gi|315917132|ref|ZP_07913372.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
gonidiaformans ATCC 25563]
gi|317058772|ref|ZP_07923257.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
3_1_5R]
gi|313684448|gb|EFS21283.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
3_1_5R]
gi|313691007|gb|EFS27842.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
gonidiaformans ATCC 25563]
Length = 195
Score = 201 bits (512), Expect = 5e-50, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 141/192 (73%), Gaps = 3/192 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V++ R ER +DI+SRLL++RI+F+ ++ D +A + AQLL+LEAE+P K+I LYI
Sbjct: 4 PTVIDNDGRQERHFDIFSRLLRDRIIFLGTEVNDQVAASLVAQLLYLEAEDPTKDIILYI 63
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V+AG+AIYDTM ++KP I T C+GQAASMG+ LLSAG KG RFAL N+RI++HQ
Sbjct: 64 NSPGGSVSAGLAIYDTMNYVKPDIQTVCIGQAASMGAFLLSAGTKGKRFALENSRIMIHQ 123
Query: 140 PSGGF---SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
P GG QA+D++ A+++ K +L I KN GKT EEV + +RD+ ++A EA
Sbjct: 124 PLGGTGSGYHQATDVQIIAKELQATKEKLASIIAKNSGKTTEEVLEDTERDNYLTAEEAV 183
Query: 197 DWGVVDKVLMSR 208
++G++D V+ +R
Sbjct: 184 NYGLIDMVMKAR 195
>gi|290962844|ref|YP_003494026.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
scabiei 87.22]
gi|260652370|emb|CBG75503.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces scabiei 87.22]
Length = 192
Score = 201 bits (511), Expect = 5e-50, Method: Composition-based stats.
Identities = 87/187 (46%), Positives = 134/187 (71%), Gaps = 1/187 (0%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
VE+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EI++YINSP
Sbjct: 2 VERTAQGERSYDVFSRLLSERIIFLGTEIDDGVANVVIAQLLHLESSAPESEIAIYINSP 61
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG T+ MAIYDTM +++ P+STFC+GQAAS ++LL+ G+ G RF L +AR+LL QP+
Sbjct: 62 GGSFTSLMAIYDTMSYVRAPVSTFCVGQAASTAAVLLAGGDAGRRFVLEHARVLLGQPAS 121
Query: 143 GFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G SD+ A+++V+I+ ++ E+ ++ G+ E+ +DRD + +A EA +G+
Sbjct: 122 GGRQGTVSDLALQAKEMVRIRSQVEEVLARHTGRATAELRADMDRDKVFTAQEAVAYGLA 181
Query: 202 DKVLMSR 208
D+VL R
Sbjct: 182 DEVLNRR 188
>gi|111115440|ref|YP_710058.1| ATP-dependent Clp protease proteolytic component [Borrelia afzelii
PKo]
gi|216263526|ref|ZP_03435521.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
afzelii ACA-1]
gi|123145670|sp|Q0SMP6|CLPP_BORAP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110890714|gb|ABH01882.1| ATP-dependent Clp protease proteolytic component [Borrelia afzelii
PKo]
gi|215980370|gb|EEC21191.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
afzelii ACA-1]
Length = 197
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 142/196 (72%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+
Sbjct: 1 MEFMHNLIPTVIEHTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+AG KG R +L
Sbjct: 61 NKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAAGAKGKRESLT 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M+
Sbjct: 121 YSRIMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMT 180
Query: 192 ASEACDWGVVDKVLMS 207
+S+A +G++D +L+
Sbjct: 181 SSDALKYGLIDNILVR 196
>gi|126663138|ref|ZP_01734136.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria
bacterium BAL38]
gi|126624796|gb|EAZ95486.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria
bacterium BAL38]
Length = 228
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 91/204 (44%), Positives = 145/204 (71%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + P ++E+ S D++SRL+ +RI+F+ ++D++A +I AQL
Sbjct: 25 HGVNSLYYDKIVGSMTPYIIEERQLNVASMDVFSRLMMDRIIFMGTGVDDYVANIIQAQL 84
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+IS+YINSPGG V AG+ IYDTMQF+KP ++T C G AASMG++LL AG
Sbjct: 85 LFLESVDASKDISIYINSPGGSVYAGLGIYDTMQFVKPDVATICTGMAASMGAVLLCAGA 144
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
+G R ALP++R+++HQPSGG G A+D+E + ++++K+K L EI K+ G+++E+V K
Sbjct: 145 EGKRSALPHSRVMIHQPSGGAQGVATDMEINLKEMLKLKNELYEIISKHSGQSFEKVHKD 204
Query: 184 LDRDHIMSASEACDWGVVDKVLMS 207
+RD+ M A+EA ++G++D+VL
Sbjct: 205 SERDYWMIAAEAKEYGMIDEVLTR 228
>gi|312195811|ref|YP_004015872.1| endopeptidase Clp [Frankia sp. EuI1c]
gi|311227147|gb|ADP80002.1| Endopeptidase Clp [Frankia sp. EuI1c]
Length = 210
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 99/192 (51%), Positives = 145/192 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P ++E+T+RGE D YS+LLKERIVF+ QI+D A + AQLLFLE+E+P ++IS+
Sbjct: 11 VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISI 70
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P I T CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 71 YINSPGGSFTSLTAIYDTMQFVRPDIQTICMGQAASAAAVLLAAGTPGKRFALQNSRILI 130
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSG GQ+SDIE A++I++++ L ++ + GK E++ + ++RD I+SA EA +
Sbjct: 131 HQPSGSGEGQSSDIEIQAREILRMRSLLEKMLADHTGKAEEDIRRDIERDKILSADEAKE 190
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ +R
Sbjct: 191 YGLIDEVIKTRK 202
>gi|154494362|ref|ZP_02033682.1| hypothetical protein PARMER_03717 [Parabacteroides merdae ATCC
43184]
gi|154085806|gb|EDN84851.1| hypothetical protein PARMER_03717 [Parabacteroides merdae ATCC
43184]
Length = 221
Score = 201 bits (511), Expect = 6e-50, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 140/208 (67%), Gaps = 5/208 (2%)
Query: 7 AKKDSEDVFLGLV-----PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
++ D ++ + P ++E+ D++SRL+ +RI+F+ Q++D+ A +I A
Sbjct: 14 MNSNALDSYMNITSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVDDYTANVIQA 73
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+L++ +P K+IS+YINSPGG V AG IYDTMQFI +ST C G AAS ++LL A
Sbjct: 74 QLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAASFAAVLLVA 133
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R ALP++R+++HQP GG GQASDIE A++I+K+K+ L I + G+ YE+VE
Sbjct: 134 GTKGKRMALPHSRVMIHQPLGGAQGQASDIEITAREILKVKKELYTIISTHSGQPYEKVE 193
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ M+A EA +G++DKVL+
Sbjct: 194 HDSDRDYWMTAEEALAYGMIDKVLVRNK 221
>gi|24380050|ref|NP_722005.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
mutans UA159]
gi|60389781|sp|Q8DST7|CLPP_STRMU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24378042|gb|AAN59311.1|AE014997_1 putative ATP-dependent Clp protease, proteolytic subunit
[Streptococcus mutans UA159]
Length = 196
Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 98/194 (50%), Positives = 139/194 (71%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA L+
Sbjct: 61 YINSPGGSVSAGLAIVDTMNFIKSDVQTIVMGIAASMGTIIASSGAKGKRFMLPNAEYLI 120
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K +++L +I N GKT +++ K +RD+ M A E
Sbjct: 121 HQPMGGTGGGTQQSDMAIAAEQLLKTRKKLEKILSDNSGKTIKQIHKDAERDYWMDAKET 180
Query: 196 CDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 181 LKYGFIDEIMENNE 194
>gi|108935916|sp|Q2JDQ8|CLPP2_FRASC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 217
Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 143/192 (74%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P ++E+T+RGE D YS+LLKERIVF+ QI+D A + AQLLFLE+E+P ++IS+
Sbjct: 18 VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISI 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 78 YINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILI 137
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SDIE A++I++++ L + + GK E++ K ++RD I SA EA +
Sbjct: 138 HQPSAQGEGQSSDIEIQAREILRMRSLLERMLAVHTGKKEEDIRKDIERDKIFSADEAKE 197
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ +R
Sbjct: 198 YGLIDEVIKTRK 209
>gi|238062482|ref|ZP_04607191.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
gi|237884293|gb|EEP73121.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
Length = 212
Score = 201 bits (510), Expect = 7e-50, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 139/205 (67%), Gaps = 2/205 (0%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQ 62
G +++ L ++ V N G+ S+D ++ +LL+ERI+F+ ++ D A ICAQ
Sbjct: 2 GGSRRLPAAWRLVMIRYDVRMRNGGQPSFDDQVFQQLLRERIIFLGTEVTDESANQICAQ 61
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL L AE+ +++I LYINSPGG V+AGMA+YDTM++++ ++T +G A SMG LL AG
Sbjct: 62 LLLLAAEDSERDIHLYINSPGGSVSAGMAVYDTMRYVRNDVATLALGMAGSMGQFLLCAG 121
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R+ALP++RI++HQPSGGF G +DI A++++ +KR + E+ ++ G+T E++ +
Sbjct: 122 TAGKRYALPHSRIMMHQPSGGFGGTVADITIQAENMLHVKRTMQELIARHSGRTLEQIRQ 181
Query: 183 TLDRDHIMSASEACDWGVVDKVLMS 207
DRD +A EA ++G+VD+VL
Sbjct: 182 DWDRDRWFTAEEAREYGLVDQVLTR 206
>gi|303316037|ref|XP_003068023.1| ATP-dependent Clp protease proteolytic subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107699|gb|EER25878.1| ATP-dependent Clp protease proteolytic subunit, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|320032384|gb|EFW14337.1| ATP-dependent Clp protease [Coccidioides posadasii str. Silveira]
Length = 237
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 107/198 (54%), Positives = 152/198 (76%), Gaps = 2/198 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E +YDI+SRLLKERIV + G++++ ++ I AQLLFLEA+NP+K+ISLY
Sbjct: 37 TPFVTETLGGAWHTYDIFSRLLKERIVCLNGEVDETVSASIVAQLLFLEADNPEKQISLY 96
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P+ST C+GQAASMGSLLL GE G RF LP++ +++H
Sbjct: 97 INSPGGSVTAGLAIYDTMTYIQSPVSTICVGQAASMGSLLLCGGEPGKRFCLPHSSVMVH 156
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEAC 196
QPSGG+ GQA+DI HA++I++++++LNEIY ++ K + EE+EK ++RD+ M A EA
Sbjct: 157 QPSGGYFGQATDIAIHAKEILRVRKQLNEIYRRHLTKDMSLEEIEKLMERDYFMGAKEAL 216
Query: 197 DWGVVDKVLMSRIDIEEK 214
D G+VD ++ R+ +E+
Sbjct: 217 DMGIVDGIMDRRMKPKEE 234
>gi|119177332|ref|XP_001240455.1| ATP-dependent Clp protease proteolytic subunit [Coccidioides
immitis RS]
Length = 237
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 107/198 (54%), Positives = 152/198 (76%), Gaps = 2/198 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E +YDI+SRLLKERIV + G++++ ++ I AQLLFLEA+NP+K+ISLY
Sbjct: 37 TPFVTETLGGAWHTYDIFSRLLKERIVCLNGEVDETVSASIVAQLLFLEADNPEKQISLY 96
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+AIYDTM +I+ P+ST C+GQAASMGSLLL GE G RF LP++ +++H
Sbjct: 97 INSPGGSVTAGLAIYDTMTYIQSPVSTICIGQAASMGSLLLCGGEPGKRFCLPHSSVMVH 156
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEAC 196
QPSGG+ GQA+DI HA++I++++++LNEIY ++ K + EE+EK ++RD+ M A EA
Sbjct: 157 QPSGGYFGQATDIAIHAKEILRVRKQLNEIYRRHLTKDMSLEEIEKLMERDYFMGAKEAL 216
Query: 197 DWGVVDKVLMSRIDIEEK 214
D G+VD ++ R+ +E+
Sbjct: 217 DMGIVDGIMDRRMKPKEE 234
>gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 194
Score = 201 bits (510), Expect = 8e-50, Method: Composition-based stats.
Identities = 97/194 (50%), Positives = 141/194 (72%), Gaps = 3/194 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + E+ D+ RL +ERI+F+T +++D +A I A LL+L++++
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDT+Q+IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQASDIE A++I++I+ +LN+IY N G+ ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLM 206
EA ++G++D+V+
Sbjct: 181 QEAKEYGLIDRVIE 194
>gi|294634101|ref|ZP_06712656.1| Clp protease [Streptomyces sp. e14]
gi|292829915|gb|EFF88269.1| Clp protease [Streptomyces sp. e14]
Length = 191
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 86/186 (46%), Positives = 132/186 (70%), Gaps = 1/186 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP V+E+T +GERSYD++SRLL ERI+F+ +I+D +A ++ AQLL LE+ P+ EIS+Y
Sbjct: 6 VPYVIERTAQGERSYDVFSRLLNERIIFLGTEIDDGVANVVIAQLLHLESAYPEHEISIY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG T+ MAIYDTM F++ PISTFC+GQAAS ++LL+ G+ G RF L +AR+LL
Sbjct: 66 LNSPGGSFTSLMAIYDTMTFVQSPISTFCVGQAASTAAVLLAGGDPGRRFVLEHARVLLG 125
Query: 139 QPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP+ G SD+ A+++V+++ ++ E+ ++ G + +DRD + +A EA
Sbjct: 126 QPASGGRQGTVSDLALQAKEMVRVRAQVEEVLSRHTGHDPAALRADMDRDKVFTAHEAVA 185
Query: 198 WGVVDK 203
+G+ D+
Sbjct: 186 YGLADE 191
>gi|309811144|ref|ZP_07704940.1| endopeptidase Clp [Dermacoccus sp. Ellin185]
gi|308434874|gb|EFP58710.1| endopeptidase Clp [Dermacoccus sp. Ellin185]
Length = 209
Score = 200 bits (509), Expect = 9e-50, Method: Composition-based stats.
Identities = 90/181 (49%), Positives = 125/181 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+F+ + D A ICAQLL L AE+P+K+I LYINSPGG VTAGMAI+D
Sbjct: 16 IYNRLLKERIIFLGSDVRDDNANAICAQLLLLAAEDPEKDIWLYINSPGGSVTAGMAIFD 75
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++ + T MG AASMG LLSAG KG R+A P+ARI++HQP GG G ASD++
Sbjct: 76 TMQWVPNDVCTVAMGLAASMGQFLLSAGAKGKRYATPHARIMMHQPLGGIQGTASDVKTQ 135
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ ++ IK+++ E+ ++ G+ E++ DRD +A+EA ++G VD V D +
Sbjct: 136 AEQLLHIKKQMAELIAEHTGQPVEKISADSDRDRWFTAAEAKEYGFVDHVFERSQDATKD 195
Query: 215 S 215
+
Sbjct: 196 A 196
>gi|224534182|ref|ZP_03674761.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
spielmanii A14S]
gi|224514543|gb|EEF84858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
spielmanii A14S]
Length = 197
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 97/196 (49%), Positives = 142/196 (72%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+
Sbjct: 1 MEFMHNLIPTVIEHTGNYERVFDIYSRLLRERIIFLSGEINDLKADTVIAQLLFLESEDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+AG KG R +L
Sbjct: 61 NKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAAGAKGKRESLT 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M+
Sbjct: 121 YSRIMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMT 180
Query: 192 ASEACDWGVVDKVLMS 207
+S+A +G++D +L+
Sbjct: 181 SSDALKYGLIDSILVR 196
>gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 197
Score = 200 bits (509), Expect = 1e-49, Method: Composition-based stats.
Identities = 95/196 (48%), Positives = 140/196 (71%), Gaps = 3/196 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + E+ D+ RL +ERI+F+T +++D +A I A L+L++++
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYFLYLDSDDQT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMGS LL+ G +G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLATGTQGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQA+DI+ AQ+I++I+ +LN+IY N G+ ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAQEILRIRSQLNQIYADNTGQALAKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLMSR 208
EA ++G++D+V+ R
Sbjct: 181 QEAKEYGLIDRVIEER 196
>gi|224533546|ref|ZP_03674135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi CA-11.2a]
gi|224513219|gb|EEF83581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi CA-11.2a]
Length = 194
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MHNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGTKGKRESLTYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++S+
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMTSSD 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|224532269|ref|ZP_03672901.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
valaisiana VS116]
gi|224511734|gb|EEF82140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
valaisiana VS116]
Length = 197
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 95/196 (48%), Positives = 142/196 (72%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+
Sbjct: 1 MEFMHNLIPTVIEHTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL++G KG R +L
Sbjct: 61 SKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLASGAKGKRESLT 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M+
Sbjct: 121 YSRIMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGIDKEKLALDMERDYFMT 180
Query: 192 ASEACDWGVVDKVLMS 207
+++A +G++D +L+
Sbjct: 181 SNDALKYGLIDSILVR 196
>gi|319745540|gb|EFV97842.1| ATP-dependent Clp protease, protease subunit [Streptococcus
agalactiae ATCC 13813]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 97/194 (50%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TGQ+ED+MA I AQLLFL+A++ K+I L
Sbjct: 5 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYL 64
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 65 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASSGAKGKRFMLPNAEYMI 124
Query: 138 HQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GG G D+ A+ ++K + L +I N G++ E+V +RD MSA E
Sbjct: 125 HQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQSIEKVHDDAERDRWMSAQET 184
Query: 196 CDWGVVDKVLMSRI 209
D+G +D ++ +
Sbjct: 185 LDYGFIDAIMENNN 198
>gi|225551910|ref|ZP_03772850.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia sp.
SV1]
gi|225370908|gb|EEH00338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia sp.
SV1]
Length = 194
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MHNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSNKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++S+
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMTSSD 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|326382827|ref|ZP_08204517.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
neofelifaecis NRRL B-59395]
gi|326198417|gb|EGD55601.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
neofelifaecis NRRL B-59395]
Length = 226
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 86/195 (44%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +E T G+R YD Y++L +ERIVFV I+ +A + AQLL LE+++P ++I++
Sbjct: 28 ILPSFIENTPNGQRQYDPYAKLFEERIVFVGTPIDQTVANDVMAQLLVLESQDPDRDITM 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V +AIYDTMQ++ + T C+G+AAS ++LL+ G G R ALPNA +L+
Sbjct: 88 YINSPGGSVPDMLAIYDTMQYVHCDVMTVCLGEAASAAAILLAGGTPGKRAALPNATVLI 147
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP G + GQ SD+E A +I +I++RL+EI + G+ E++ K DRD+I++A +A
Sbjct: 148 HQPRTGGAYQGQVSDLEIQAAEIERIRKRLDEILASHTGQDPEKIRKDTDRDNILTADQA 207
Query: 196 CDWGVVDKVLMSRID 210
++G++D+V R
Sbjct: 208 KEYGIIDEVFDYRKK 222
>gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 194
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 97/194 (50%), Positives = 141/194 (72%), Gaps = 3/194 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + E+ D+ RL +ERI+F+T +++D +A I A LL+L++++
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDT+Q+IK + T C+G AASMGS LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVITICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQPSGG GQASDIE A++I++I+ +LN+IY N G+ ++EK +DRD MSA
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSA 180
Query: 193 SEACDWGVVDKVLM 206
EA ++G++D+V+
Sbjct: 181 QEAKEYGLIDRVIE 194
>gi|271968525|ref|YP_003342721.1| endopeptidase Clp [Streptosporangium roseum DSM 43021]
gi|270511700|gb|ACZ89978.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021]
Length = 214
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 91/196 (46%), Positives = 128/196 (65%), Gaps = 1/196 (0%)
Query: 20 PMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P + Q N R D +Y RLL+ERI+ + Q+ D +A ICA+LL L A++P ++I LY
Sbjct: 15 PESMSQPNGSFRLEDQLYQRLLRERIIVLGTQVNDEIANRICAELLLLAADDPDRDIWLY 74
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMAIYD M+++ + T MG AASMG LL AGEKG R+ALP+ARI++H
Sbjct: 75 INSPGGSVTAGMAIYDMMEYVPNNVCTVAMGLAASMGQFLLCAGEKGKRYALPHARIMMH 134
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+DI A+ ++ +K+ L E + G+ +++E DRD +A EA D+
Sbjct: 135 QPSGGIGGTAADIAIQAEQMLYVKKTLAERIAFHTGQPLDQIEADSDRDRWFTAEEAKDY 194
Query: 199 GVVDKVLMSRIDIEEK 214
G +D+V+ S +
Sbjct: 195 GFIDQVVRSARQVPST 210
>gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/200 (46%), Positives = 137/200 (68%), Gaps = 4/200 (2%)
Query: 15 FLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 23 IMPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGVANSLVAQMLYLDSEDS 82
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LLSAG K R ALP
Sbjct: 83 TKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALP 142
Query: 132 NARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
++RI++HQP GG QASDIE A++I++IK LN + G+++E++EK DRD+ +
Sbjct: 143 HSRIMIHQPLGGTSQRQASDIEIEAKEILRIKEMLNRSLAEMTGQSFEKIEKDTDRDYFL 202
Query: 191 SASEACDWGVVDKVLMSRID 210
SA EA ++G++DKV+ +
Sbjct: 203 SAKEAEEYGLIDKVICHPNE 222
>gi|195941431|ref|ZP_03086813.1| ATP-dependent Clp protease proteolytic component (clpP-1) [Borrelia
burgdorferi 80a]
gi|218249848|ref|YP_002375116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi ZS7]
gi|223889055|ref|ZP_03623645.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 64b]
gi|224532428|ref|ZP_03673055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi WI91-23]
gi|225549547|ref|ZP_03770513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 118a]
gi|226321916|ref|ZP_03797442.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi Bol26]
gi|218165036|gb|ACK75097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi ZS7]
gi|223885481|gb|EEF56581.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 64b]
gi|224512638|gb|EEF83012.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi WI91-23]
gi|225369824|gb|EEG99271.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 118a]
gi|226233105|gb|EEH31858.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi Bol26]
gi|312147788|gb|ADQ30447.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi JD1]
gi|312149314|gb|ADQ29385.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi N40]
Length = 194
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MHNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++S+
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMTSSD 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|86739913|ref|YP_480313.1| ATP-dependent Clp protease proteolytic subunit [Frankia sp. CcI3]
gi|86566775|gb|ABD10584.1| ATP-dependent Clp protease proteolytic subunit ClpP [Frankia sp.
CcI3]
Length = 226
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 143/192 (74%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P ++E+T+RGE D YS+LLKERIVF+ QI+D A + AQLLFLE+E+P ++IS+
Sbjct: 27 VLPNIIEKTSRGEYGMDPYSKLLKERIVFLGVQIDDVSANDVMAQLLFLESEDPDRDISI 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ AIYDTMQF++P IST CMGQAAS ++LL+AG G RFAL N+RIL+
Sbjct: 87 YINSPGGSFTSLTAIYDTMQFVRPDISTICMGQAASAAAVLLAAGTPGKRFALENSRILI 146
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SDIE A++I++++ L + + GK E++ K ++RD I SA EA +
Sbjct: 147 HQPSAQGEGQSSDIEIQAREILRMRSLLERMLAVHTGKKEEDIRKDIERDKIFSADEAKE 206
Query: 198 WGVVDKVLMSRI 209
+G++D+V+ +R
Sbjct: 207 YGLIDEVIKTRK 218
>gi|15594956|ref|NP_212745.1| ATP-dependent Clp protease proteolytic subunit [Borrelia
burgdorferi B31]
gi|18202051|sp|O51556|CLPP1_BORBU RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|2688532|gb|AAC66964.1| ATP-dependent Clp protease proteolytic component (clpP-1) [Borrelia
burgdorferi B31]
Length = 197
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/196 (48%), Positives = 141/196 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+
Sbjct: 1 MEFMHNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L
Sbjct: 61 SKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLT 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M+
Sbjct: 121 YSRIMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMT 180
Query: 192 ASEACDWGVVDKVLMS 207
+S+A +G++D +L+
Sbjct: 181 SSDALKYGLIDSILVR 196
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 94/199 (47%), Positives = 138/199 (69%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LLSAG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A++I++IK LN+ + G+TYE++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKNYGLIDRVITHPSE 199
>gi|158316683|ref|YP_001509191.1| ATP-dependent Clp protease proteolytic subunit [Frankia sp.
EAN1pec]
gi|158112088|gb|ABW14285.1| Endopeptidase Clp [Frankia sp. EAN1pec]
Length = 210
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 93/192 (48%), Positives = 143/192 (74%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VVE+T RGE S D YS+LL+ERI+F+ QI+D A + AQLLFLE E+P ++IS+
Sbjct: 13 VLPNVVERTPRGEYSMDPYSKLLRERIIFLGTQIDDTSANDVMAQLLFLEGEDPDRDISI 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDT+ F++P ++T CMGQAAS ++LL+AG G R ALPN+RI++
Sbjct: 73 YINSPGGSLTALTAIYDTICFVRPEVATVCMGQAASAAAVLLAAGAPGKRVALPNSRIMI 132
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ+SD+E A+++++++ + + V++ G+ E+ + ++RD I++A +A
Sbjct: 133 HQPSAQGEGQSSDLEIQAREVLRLRALMERMLVEHTGRAEHEIRQDVERDTILTAEQARQ 192
Query: 198 WGVVDKVLMSRI 209
+G+VD+V+ SR
Sbjct: 193 YGIVDEVVASRK 204
>gi|254415772|ref|ZP_05029530.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
gi|196177478|gb|EDX72484.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
Length = 206
Score = 200 bits (508), Expect = 1e-49, Method: Composition-based stats.
Identities = 102/201 (50%), Positives = 141/201 (70%), Gaps = 7/201 (3%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
MVVEQ+ GER++DIYSRLL+ERIVF+ +I D +A I AQLL+LEAE+P K+I LYI+
Sbjct: 1 MVVEQSGVGERAFDIYSRLLRERIVFLGTRINDVVADSIIAQLLYLEAEDPTKDIQLYIH 60
Query: 81 SPGGVVTA------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
SPGG + GMAIYDTMQ I+P I T C G A MG +LL+ G G R +LPNAR
Sbjct: 61 SPGGPILGLGGVIAGMAIYDTMQQIRPDIVTICFGAATDMGVILLTGGTPGKRMSLPNAR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++ QP GG GQA DIE A++I+ K +LNE+ + G+ YE + +RD +SA+E
Sbjct: 121 IMISQPLGGAQGQAVDIEIQAKEILYHKNQLNELMAYHTGQPYERIATDTERDFFLSAAE 180
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G+VD+V+ SR +++ ++
Sbjct: 181 AKEYGLVDQVI-SRENLKSEA 200
>gi|221218018|ref|ZP_03589484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 72a]
gi|221191966|gb|EEE18187.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 72a]
Length = 194
Score = 199 bits (507), Expect = 1e-49, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MYNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDSKADTVIAQLLFLESEDSSKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++S+
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMTSSD 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|325970910|ref|YP_004247101.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta sp.
Buddy]
gi|324026148|gb|ADY12907.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta sp.
Buddy]
Length = 202
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 98/200 (49%), Positives = 147/200 (73%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ +PMVVEQ+ GER+YDI+SRLLK+RI+F+ G+I D A L+ AQ+LFL+
Sbjct: 1 MNNHPLRMQSTIPMVVEQSGVGERAYDIFSRLLKDRIIFLDGEIHDANADLVVAQMLFLD 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+ K+ISLYINSPGG VTAG+AIYDT+Q++ + T CMGQAASM +LLL++G +G R
Sbjct: 61 SEDSTKDISLYINSPGGSVTAGLAIYDTIQYLHCKVQTICMGQAASMAALLLASGSEGKR 120
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
F LP+AR+++HQP GG GQ++DI HA++I ++K+ +I ++ K++E+V K ++RD
Sbjct: 121 FMLPSARVMIHQPWGGVEGQSTDISIHAKEISRLKKLTIDIIAQHTHKSFEQVSKDVERD 180
Query: 188 HIMSASEACDWGVVDKVLMS 207
+S+ +A +G+VD V+
Sbjct: 181 FFLSSDDAVSYGIVDSVMRR 200
>gi|218262313|ref|ZP_03476827.1| hypothetical protein PRABACTJOHN_02501 [Parabacteroides johnsonii
DSM 18315]
gi|218223464|gb|EEC96114.1| hypothetical protein PRABACTJOHN_02501 [Parabacteroides johnsonii
DSM 18315]
Length = 221
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 94/208 (45%), Positives = 140/208 (67%), Gaps = 5/208 (2%)
Query: 7 AKKDSEDVFLGLV-----PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
++ D ++ + P ++E+ D++SRL+ +RI+F+ Q++D+ A +I A
Sbjct: 14 MNSNALDSYMNITSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVDDYTANVIQA 73
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+L++ +P K+IS+YINSPGG V AG IYDTMQFI +ST C G AAS ++LL A
Sbjct: 74 QLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAASFAAVLLVA 133
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G KG R ALP++R+++HQP GG GQASDIE A++I+K+K+ L I + G+ YE+VE
Sbjct: 134 GTKGKRMALPHSRVMIHQPLGGAQGQASDIEITAREILKVKKELYTIISTHSGQPYEKVE 193
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ M+A EA +G++DKVL+
Sbjct: 194 HDSDRDYWMTAEEALTYGMIDKVLVRNK 221
>gi|312195810|ref|YP_004015871.1| endopeptidase Clp [Frankia sp. EuI1c]
gi|311227146|gb|ADP80001.1| Endopeptidase Clp [Frankia sp. EuI1c]
Length = 215
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 90/188 (47%), Positives = 126/188 (67%), Gaps = 1/188 (0%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q+ G +Y+RLL+ERI+F+ +ED +A ICAQLL L AE+P ++I LYINSPGG
Sbjct: 22 QSGPGFDEQ-VYNRLLRERIIFLGTVVEDSIANAICAQLLLLNAEDPNRDIWLYINSPGG 80
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMAIYDTMQF++ ++T +G AASMG LL AG G R++LP+ARI++HQPSGG
Sbjct: 81 SVSAGMAIYDTMQFVENDVATVSLGLAASMGQFLLCAGAAGKRYSLPHARIMMHQPSGGI 140
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G ASDI A+ ++ KR + E + G+ +++E+ DRD +A EA D+G VD V
Sbjct: 141 GGTASDIAIQAEQMLYTKRMMQERIAFHTGQPIDQIERDSDRDRWFTAEEAKDYGFVDHV 200
Query: 205 LMSRIDIE 212
+ +
Sbjct: 201 VQRVRQVP 208
>gi|288920827|ref|ZP_06415125.1| Endopeptidase Clp [Frankia sp. EUN1f]
gi|288347786|gb|EFC82065.1| Endopeptidase Clp [Frankia sp. EUN1f]
Length = 255
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q+ G +++RLL+ERI+F+ +ED +A ICAQLL L AE+PQ++I LYINSPGG
Sbjct: 63 QSGPGFDEQ-VFNRLLRERIIFLGSVVEDSIANAICAQLLLLNAEDPQRDIFLYINSPGG 121
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMAIYDTMQ+++ ++T +G AASMG LL AG G R++LP+ARI++HQPSGG
Sbjct: 122 SVSAGMAIYDTMQYVENDVATVSLGLAASMGQFLLCAGAPGKRYSLPHARIMMHQPSGGI 181
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G ASDI A+ ++ KR + E + G+ E++E+ DRD +A EA D+G VD V
Sbjct: 182 GGTASDIAIQAEQMLYTKRMMQERIAFHTGQPVEQIERDSDRDRWFTADEAKDYGFVDHV 241
Query: 205 LMSRIDIEEK 214
+ + +
Sbjct: 242 VQRARQVPSE 251
>gi|216264918|ref|ZP_03436910.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 156a]
gi|225548921|ref|ZP_03769898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 94a]
gi|226321180|ref|ZP_03796719.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 29805]
gi|215981391|gb|EEC22198.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 156a]
gi|225370524|gb|EEG99960.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 94a]
gi|226233413|gb|EEH32155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
burgdorferi 29805]
Length = 194
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 96/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MYNLIPTVIENTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDSSKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLTYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++S+
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMTSSD 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|51598863|ref|YP_073051.1| ATP-dependent Clp protease proteolytic subunit [Borrelia garinii
PBi]
gi|67460252|sp|Q660R2|CLPP_BORGA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51573434|gb|AAU07459.1| ATP-dependent Clp protease proteolytic component [Borrelia garinii
PBi]
Length = 194
Score = 199 bits (507), Expect = 2e-49, Method: Composition-based stats.
Identities = 95/193 (49%), Positives = 140/193 (72%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+ K+
Sbjct: 1 MHNLIPTVIEHTGNYERVFDIYSRLLRERIIFLSGEINDLKADTVIAQLLFLESEDSNKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G KG R +L +R
Sbjct: 61 IYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGAKGKRESLAYSR 120
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M++++
Sbjct: 121 IMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGIDKEKLALDMERDYFMTSND 180
Query: 195 ACDWGVVDKVLMS 207
A +G++D +L+
Sbjct: 181 ALKYGLIDSILVR 193
>gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109]
gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109]
Length = 200
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I+++K LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLADMSGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKEYGLIDRVISHPNE 199
>gi|160331468|ref|XP_001712441.1| clpP2 [Hemiselmis andersenii]
gi|159765889|gb|ABW98116.1| clpP2 [Hemiselmis andersenii]
Length = 233
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 90/202 (44%), Positives = 137/202 (67%), Gaps = 3/202 (1%)
Query: 8 KKDSEDVFLGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ + + + VP V + DIY+RL +ERI+F+ +I+D +A I A +L
Sbjct: 28 QSQKDVFMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVML 87
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
+L++E+ K I LYINSPGG V +G+A+YDT++ IK + T +G AASM S +L+AGEK
Sbjct: 88 YLDSEDNSKPIYLYINSPGGSVISGLAMYDTIRHIKSEVVTINVGLAASMASFILAAGEK 147
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R ALP++RI++HQP GG GQASDI+ AQ I++I++ L E Y + G+ YE+V + +
Sbjct: 148 GKRLALPHSRIMIHQPMGGAQGQASDIKVEAQQILRIRKSLTEDYAQMTGRPYEKVLQDM 207
Query: 185 DRDHIMSASEACDWGVVDKVLM 206
DRD+ MSA EA ++G++D+V+
Sbjct: 208 DRDNFMSAYEAVEYGLIDRVIE 229
>gi|219684233|ref|ZP_03539177.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
garinii PBr]
gi|219685103|ref|ZP_03539923.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
garinii Far04]
gi|219672222|gb|EED29275.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
garinii PBr]
gi|219673199|gb|EED30218.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Borrelia
garinii Far04]
Length = 197
Score = 199 bits (506), Expect = 2e-49, Method: Composition-based stats.
Identities = 94/196 (47%), Positives = 141/196 (71%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ L+P V+E T ER +DIYSRLL+ERI+F++G+I D A + AQLLFLE+E+
Sbjct: 1 MEFMHNLIPTVIEHTGNYERVFDIYSRLLRERIIFLSGEINDPKADTVIAQLLFLESEDS 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LY+NSPGG +TAG+AIYDTMQ+IKP + T C+GQAASMG+ LL+ G +G R +L
Sbjct: 61 NKDIYLYLNSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMGAFLLAGGARGKRESLA 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG SGQASDI A +I+++K+ + +I G E++ ++RD+ M+
Sbjct: 121 YSRIMIHQPWGGISGQASDINIQANEILRLKKLIIDIMSNQIGVDKEKLALDMERDYFMT 180
Query: 192 ASEACDWGVVDKVLMS 207
+++A +G++D +L+
Sbjct: 181 SNDALKYGLIDSILVR 196
>gi|169351385|ref|ZP_02868323.1| hypothetical protein CLOSPI_02165 [Clostridium spiroforme DSM 1552]
gi|169291607|gb|EDS73740.1| hypothetical protein CLOSPI_02165 [Clostridium spiroforme DSM 1552]
Length = 190
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 137/190 (72%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+E+TN+ E +YDIYSRLL++RI+ +TG I+D MA+ I QLL+LE+ + +I
Sbjct: 1 MHLIPTVIEKTNQREYAYDIYSRLLEDRIILLTGTIDDKMASSIVGQLLYLESIDNSADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG + AGMAIYDTM FIK +ST +G AASM + LLSAG KG R +LPN+ I
Sbjct: 61 YMYINSPGGSINAGMAIYDTMNFIKCDVSTIVIGMAASMAAFLLSAGTKGKRCSLPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G F GQASDIE A+ I+K K +LN++ KN + ++ DRD+ + +EA
Sbjct: 121 MIHQPLGAFEGQASDIEISAKRILKQKEKLNKLLSKNTNQPLSKIITDTDRDYFLEPNEA 180
Query: 196 CDWGVVDKVL 205
+G++D+++
Sbjct: 181 LVYGIIDEII 190
>gi|312131371|ref|YP_003998711.1| ATP-dependent clp protease proteolytic subunit clpp [Leadbetterella
byssophila DSM 17132]
gi|311907917|gb|ADQ18358.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leadbetterella
byssophila DSM 17132]
Length = 225
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 137/191 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ + D++SRL+ +RI+FV I+D +A ++ AQLLFLE+ + +K+I
Sbjct: 32 NMTPNIIEERPMRFAAIDVFSRLIMDRIIFVGTGIDDQVANIVVAQLLFLESVDAKKDIL 91
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V AG+ +YDTMQ+++P ++T C AASMG++LL+ G G R ALP+AR++
Sbjct: 92 MYLNSPGGSVYAGLGMYDTMQYVRPEVATICTSLAASMGAVLLAGGAAGKRTALPHARVM 151
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ+ D+E + I+++++ L EI ++ GKT+EE+E+ DRD+ M A EA
Sbjct: 152 IHQPSGGAQGQSRDMEITVKQIIELRKELYEILAQHTGKTFEEIERDSDRDYWMKAEEAK 211
Query: 197 DWGVVDKVLMS 207
+G++D+VL
Sbjct: 212 AYGLIDEVLYR 222
>gi|291515533|emb|CBK64743.1| ATP-dependent Clp protease proteolytic subunit ClpP [Alistipes
shahii WAL 8301]
Length = 222
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 94/191 (49%), Positives = 136/191 (71%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ + D++SRL+ +RI+F+ I D A +I AQLLFLE+ +P+K+I +YI
Sbjct: 32 PTIIEERQLNIATMDVFSRLMMDRIIFLGAPIYDDAANIIQAQLLFLESVDPEKDIQIYI 91
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V+AG+ IYDTMQ + ++T C G AASMG++LL+AG KG R ALP++R+++HQ
Sbjct: 92 NSPGGSVSAGLGIYDTMQLVNSDVATICTGLAASMGAVLLTAGAKGKRSALPHSRVMIHQ 151
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQASDIE A++I+K KR L EI + G +++EK DRD+ +SA EA D+G
Sbjct: 152 PLGGAQGQASDIEITAREILKTKRELYEILSVHSGVPVKKIEKDADRDYWLSAREAKDYG 211
Query: 200 VVDKVLMSRID 210
++D+VL R
Sbjct: 212 LIDEVLSKRDK 222
>gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 201
Score = 199 bits (505), Expect = 3e-49, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT++++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK LN+ G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNKSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKNYGLIDRVISHPSE 199
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 198 bits (504), Expect = 3e-49, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ + D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQDVNDGVANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTMQ++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A++I+++K LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A+EA D+G++D+V+ +
Sbjct: 181 AAEAKDYGLIDRVISHPNE 199
>gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 200
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ G++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGGEVNDGVANALVAQMLYLDSDDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q+IK + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYIKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A++I+++K +LN+ G+T E++ K DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKDQLNKQLADMSGQTIEKITKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A +A +G++D+V+ +
Sbjct: 181 ADDAKAYGLIDRVISHPSE 199
>gi|296129241|ref|YP_003636491.1| Endopeptidase Clp [Cellulomonas flavigena DSM 20109]
gi|296021056|gb|ADG74292.1| Endopeptidase Clp [Cellulomonas flavigena DSM 20109]
Length = 231
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 137/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F+ Q++D A + AQLL LE+ +P ++I+L
Sbjct: 28 VLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLVLESTDPDRDITL 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 88 YINSPGGSFTALTAIYDTMQYIKPHIQTVCLGQAASAAAILLAAGSPGKRLALPNARVLI 147
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ QASDIE A ++++I+ L + ++ G+ E+V++ ++RD I++A++A
Sbjct: 148 HQPAMEGGGYAQASDIEIQANELIRIRDWLEKALAQHTGRPLEQVQQDIERDKILTAAQA 207
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL SR
Sbjct: 208 KEYGIVDQVLESRK 221
>gi|226309395|ref|YP_002769355.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229494681|ref|ZP_04388439.1| Clp protease [Rhodococcus erythropolis SK121]
gi|226188512|dbj|BAH36616.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229318348|gb|EEN84211.1| Clp protease [Rhodococcus erythropolis SK121]
Length = 195
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 95/188 (50%), Positives = 135/188 (71%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T GERS+DI+SRLL ERIVF+ +I+D +A ++ AQ+L L+A+NP +EI LY
Sbjct: 6 IPSVIERTPTGERSFDIFSRLLNERIVFLGTEIDDGVANVVMAQMLHLQADNPDREIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA +AIYDTMQF+KP IST+CMGQAAS ++LL+AG G R L ++R+LLH
Sbjct: 66 INSPGGSTTAMLAIYDTMQFLKPTISTYCMGQAASAAAVLLAAGTPGHRHVLAHSRVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS SG SD+ A +I++I+ + I K+ G++ E + K DRD I +A +A +
Sbjct: 126 QPSTQGSGTISDLALQAAEILRIREQTEAILSKHTGQSVERLRKDTDRDRIFTADDAISY 185
Query: 199 GVVDKVLM 206
G+ D ++
Sbjct: 186 GLADTLIE 193
>gi|150009000|ref|YP_001303743.1| ATP-dependent Clp protease proteolytic subunit [Parabacteroides
distasonis ATCC 8503]
gi|255014831|ref|ZP_05286957.1| ATP-dependent Clp protease, proteolytic subunit [Bacteroides sp.
2_1_7]
gi|256840999|ref|ZP_05546506.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Parabacteroides sp. D13]
gi|262383890|ref|ZP_06077026.1| Clp protease [Bacteroides sp. 2_1_33B]
gi|298375768|ref|ZP_06985724.1| Clp protease [Bacteroides sp. 3_1_19]
gi|301312050|ref|ZP_07217972.1| Clp protease [Bacteroides sp. 20_3]
gi|149937424|gb|ABR44121.1| ATP-dependent Clp protease, proteolytic subunit [Parabacteroides
distasonis ATCC 8503]
gi|256736842|gb|EEU50169.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Parabacteroides sp. D13]
gi|262294788|gb|EEY82720.1| Clp protease [Bacteroides sp. 2_1_33B]
gi|298266805|gb|EFI08462.1| Clp protease [Bacteroides sp. 3_1_19]
gi|300830152|gb|EFK60800.1| Clp protease [Bacteroides sp. 20_3]
Length = 220
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 95/209 (45%), Positives = 139/209 (66%), Gaps = 1/209 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
+ G A ++ + P ++E+ D++SRL+ +RI+F+ Q++D+ A +I
Sbjct: 12 LGMSGTALDSYMNISSSYISPTIIEERQLNVAQMDVFSRLMMDRIIFLGTQVDDYTANVI 71
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL+L++ +P K+IS+YINSPGG V AG IYDTMQFI +ST C G AASM S+LL
Sbjct: 72 QAQLLYLDSSDPGKDISIYINSPGGSVYAGYGIYDTMQFISSDVSTICTGMAASMASVLL 131
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG KG RF L ++R+++HQP GG GQASDIE A++I+K+K+ L I + G+ YEE
Sbjct: 132 VAGTKGKRFGLKHSRVMIHQPLGGVQGQASDIEITAREILKVKKELYTIISDHSGRPYEE 191
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+E+ DRD M+A EA +G++D VL +
Sbjct: 192 IERDGDRDFWMTAEEAKKYGMIDDVLTRK 220
>gi|300772705|ref|ZP_07082575.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
spiritivorum ATCC 33861]
gi|300761008|gb|EFK57834.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
spiritivorum ATCC 33861]
Length = 232
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 92/209 (44%), Positives = 147/209 (70%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ + +++ L P +VE+ D++SRL+ +RI+F+ + D +A +I AQL
Sbjct: 24 DSFISRVQQNMPTNLTPYIVEERQLNVAQMDVFSRLMMDRIIFLGDAVTDQVANIIQAQL 83
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFL++ + Q++I +YINSPGG V AG+ IYDTMQ+I P ++T C G AASMG++LL AG
Sbjct: 84 LFLQSTDAQRDIQIYINSPGGSVYAGLGIYDTMQYISPDVATICTGMAASMGAVLLVAGA 143
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R AL ++R+++HQPSGG G A+D+E + ++++K+K L I ++ G++YE VEK+
Sbjct: 144 KGKRAALKHSRVMIHQPSGGAQGVAADMEINLREMLKLKEELYTIIAEHSGQSYEWVEKS 203
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ M A+EA ++G+VD+VL S+ +I+
Sbjct: 204 SDRDYWMRAAEAKEFGMVDEVLSSKKEIK 232
>gi|256820835|ref|YP_003142114.1| Endopeptidase Clp [Capnocytophaga ochracea DSM 7271]
gi|256582418|gb|ACU93553.1| Endopeptidase Clp [Capnocytophaga ochracea DSM 7271]
Length = 219
Score = 198 bits (504), Expect = 4e-49, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 137/205 (66%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + P ++E+ D++SRL+ +RI+F+ + D +A ++ AQL
Sbjct: 15 HGVNSLYYDKIIGSMTPYIMEERQLNVAQMDVFSRLMMDRIIFLGTDVNDQVANIVTAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+I +YINSPGG V AG+ IYDTMQFIKP ++T C G AASM ++LL AG
Sbjct: 75 LFLESVDSAKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAGT 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
+G R ALP++R+++HQPSGG G ASD+E + ++++K+K L EI K+ + + +V K
Sbjct: 135 EGKRSALPHSRVMIHQPSGGAQGVASDMEINLKEMLKLKNELYEIIAKHSKQPFAKVYKD 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSR 208
+RD+ M A EA ++G++D+VL +
Sbjct: 195 SERDYWMIAREAKEYGMIDEVLERK 219
>gi|227538076|ref|ZP_03968125.1| endopeptidase Clp [Sphingobacterium spiritivorum ATCC 33300]
gi|227242152|gb|EEI92167.1| endopeptidase Clp [Sphingobacterium spiritivorum ATCC 33300]
Length = 232
Score = 198 bits (503), Expect = 4e-49, Method: Composition-based stats.
Identities = 92/209 (44%), Positives = 147/209 (70%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ + +++ L P +VE+ D++SRL+ +RI+F+ + D +A +I AQL
Sbjct: 24 DSFISRVQQNMPTNLTPYIVEERQLNVAQMDVFSRLMMDRIIFLGDAVTDQVANIIQAQL 83
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFL++ + Q++I +YINSPGG V AG+ IYDTMQ+I P ++T C G AASMG++LL AG
Sbjct: 84 LFLQSTDAQRDIQIYINSPGGSVYAGLGIYDTMQYISPDVATICTGMAASMGAVLLVAGA 143
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R AL ++R+++HQPSGG G A+D+E + ++++K+K L I ++ G++YE VEK+
Sbjct: 144 KGKRTALKHSRVMIHQPSGGAQGVAADMEINLREMLKLKEELYTIIAEHSGQSYEWVEKS 203
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIE 212
DRD+ M A+EA ++G+VD+VL S+ +I+
Sbjct: 204 SDRDYWMRAAEAKEFGMVDEVLSSKKEIK 232
>gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|124013824|sp|Q3ALC4|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 200
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I+++K LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKEYGLIDRVISHPNE 199
>gi|298372622|ref|ZP_06982612.1| Clp protease [Bacteroidetes oral taxon 274 str. F0058]
gi|298275526|gb|EFI17077.1| Clp protease [Bacteroidetes oral taxon 274 str. F0058]
Length = 226
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 135/191 (70%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ D++SRL+ +RI+F+ I+D++A +I AQLLFL+ +P K+IS+YI
Sbjct: 35 PTILEERQLNVTQMDVFSRLMMDRIIFLGTPIDDYVANVIQAQLLFLDTSDPGKDISIYI 94
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVV AG+ IYDTMQ++ + T C G AASM ++LL AGEKG R ALP++R+++HQ
Sbjct: 95 NSPGGVVQAGLGIYDTMQYVSSKVGTICTGMAASMAAVLLVAGEKGRRSALPHSRVMIHQ 154
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
PSGG GQ+SD+E +++ K+++ L I ++ G+ ++ VEK DRD+ M+A EA D+G
Sbjct: 155 PSGGMQGQSSDMEIAVREVQKLRKELYHIISEHSGQPFDRVEKDSDRDYWMTAQEALDYG 214
Query: 200 VVDKVLMSRID 210
+VD VL
Sbjct: 215 MVDSVLTKNNK 225
>gi|158317030|ref|YP_001509538.1| endopeptidase Clp [Frankia sp. EAN1pec]
gi|158112435|gb|ABW14632.1| Endopeptidase Clp [Frankia sp. EAN1pec]
Length = 213
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 125/180 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+++RLL+ERI+F+ +ED +A ICAQLL L AE+P+++I LYINSPGG V+AGMAIYD
Sbjct: 30 VFNRLLRERIIFLGSVVEDSIANAICAQLLLLNAEDPERDIFLYINSPGGSVSAGMAIYD 89
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+++ ++T +G AASMG LL AG G R++LP+ARI++HQPSGG G ASDI
Sbjct: 90 TMQYVENDVATVSLGLAASMGQFLLCAGAPGKRYSLPHARIMMHQPSGGIGGTASDIAIQ 149
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ ++ KR + E + G+ E++E+ DRD +A EA D+G VD V+ + +
Sbjct: 150 AEQMLYTKRMMQERIAFHTGQPVEQIERDSDRDRWFTADEAKDYGFVDHVVQRARQVPSE 209
>gi|25028868|ref|NP_738922.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
efficiens YS-314]
gi|259507930|ref|ZP_05750830.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium efficiens YS-314]
gi|67460556|sp|Q8FN36|CLPP2_COREF RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|23494155|dbj|BAC19122.1| putative endopeptidase Clp chain P1 [Corynebacterium efficiens
YS-314]
gi|259164425|gb|EEW48979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium efficiens YS-314]
Length = 199
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 125/173 (72%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
DI+ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIY
Sbjct: 19 DIFDRLLRERIIFLGSQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIY 78
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM++ I+T+ MG AASMG LLS G G R+ALP+ARI++HQPS G G A+DI
Sbjct: 79 DTMKYSPCDIATYGMGLAASMGQFLLSGGTPGKRYALPHARIMMHQPSAGVGGTAADIAI 138
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ + KR + ++ ++ G+T+E+V K DRD +A +A ++G+VD V+
Sbjct: 139 QAEQFAQTKREMAKLIAEHTGQTFEQVTKDSDRDRWFTAEQAKEYGLVDHVIT 191
>gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 200
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 95/199 (47%), Positives = 138/199 (69%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP GG QASDIE A++I++IK LN+ CG++ E+V K DRD+ +S
Sbjct: 121 ARIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSLADMCGQSLEKVTKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A+EA D+G++D+V+ +
Sbjct: 181 AAEAKDYGLIDRVISHPSE 199
>gi|23465517|ref|NP_696120.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum NCC2705]
gi|46190462|ref|ZP_00206473.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Bifidobacterium longum DJO10A]
gi|189439548|ref|YP_001954629.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum DJO10A]
gi|227546002|ref|ZP_03976051.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|239621942|ref|ZP_04664973.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|312132957|ref|YP_004000296.1| clpp1 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482288|ref|ZP_07941309.1| Clp protease [Bifidobacterium sp. 12_1_47BFAA]
gi|322688891|ref|YP_004208625.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis 157F]
gi|67460559|sp|Q8G5R0|CLPP1_BIFLO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|23326177|gb|AAN24756.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
longum NCC2705]
gi|189427983|gb|ACD98131.1| ATP-dependent Clp proteases Protease subunit [Bifidobacterium
longum DJO10A]
gi|227213636|gb|EEI81485.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|239515133|gb|EEQ55000.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|291517064|emb|CBK70680.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Bifidobacterium longum subsp. longum F8]
gi|311773939|gb|ADQ03427.1| ClpP1 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916304|gb|EFV37705.1| Clp protease [Bifidobacterium sp. 12_1_47BFAA]
gi|320460227|dbj|BAJ70847.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis 157F]
Length = 233
Score = 198 bits (503), Expect = 5e-49, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 161 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTAPEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRQ 233
>gi|313158115|gb|EFR57520.1| endopeptidase Clp [Alistipes sp. HGB5]
Length = 222
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 93/191 (48%), Positives = 136/191 (71%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ + D++SRL+ +RI+F+ I D A +I AQLLFLE+ +P+K+I +YI
Sbjct: 32 PTIIEERQLNIATMDVFSRLMMDRIIFLGAPIYDDAANIIQAQLLFLESVDPEKDIQIYI 91
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V+AG+ IYDTMQ + ++T C G AASMG++LL+AG KG R ALP++R+++HQ
Sbjct: 92 NSPGGSVSAGLGIYDTMQLVNSDVATICTGLAASMGAVLLTAGAKGKRSALPHSRVMIHQ 151
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQASDIE A++I+K KR L EI + G +++EK DRD+ +SA EA ++G
Sbjct: 152 PLGGAQGQASDIEITAREIMKTKRELYEILSAHSGVALKKIEKDADRDYWLSAREAKEYG 211
Query: 200 VVDKVLMSRID 210
++D+VL R
Sbjct: 212 LIDEVLSKRGK 222
>gi|110638106|ref|YP_678315.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cytophaga
hutchinsonii ATCC 33406]
gi|110280787|gb|ABG58973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cytophaga
hutchinsonii ATCC 33406]
Length = 229
Score = 198 bits (503), Expect = 6e-49, Method: Composition-based stats.
Identities = 96/206 (46%), Positives = 144/206 (69%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S+ + + + +G+ P VVE+ D++SRL+ +RI+F+ I+D++A ++ A
Sbjct: 24 SYINQIQSIAPNYIVGMTPNVVEERQMRATVIDVFSRLMGDRIIFLGTGIDDYVANVVNA 83
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFLE+ +P+K+I +YINSPGG V AG+ IYDTM +I P +ST C+G AASMG++LL
Sbjct: 84 QLLFLESVDPKKDIMMYINSPGGSVYAGLGIYDTMHYINPDVSTTCVGLAASMGAVLLCG 143
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALP++RI++HQP GG GQASDIE A++I+K+K L EI K+ GK E +E
Sbjct: 144 GAAKKRSALPHSRIMIHQPLGGAQGQASDIEITAREILKLKGELYEILAKHSGKDIETIE 203
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMS 207
K DRD+ + A+EA ++G++D+VL+
Sbjct: 204 KHSDRDYWLKAAEAKEYGIIDEVLVK 229
>gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 200
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFMGSEVNDAVANALVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTMQ++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDI A++I++IK LN G+ +E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIAIEAKEILRIKDMLNHSMADMTGQPFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A+EA D+G++D+V+ +
Sbjct: 181 AAEAKDYGLIDRVIAHPSE 199
>gi|117927945|ref|YP_872496.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Acidothermus
cellulolyticus 11B]
gi|117648408|gb|ABK52510.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidothermus
cellulolyticus 11B]
Length = 221
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 84/179 (46%), Positives = 123/179 (68%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++++LL+ RI+F+ ++D +A ICAQLL L AE+P ++I LYINSPGG V AGMAIY
Sbjct: 36 DVFNKLLRNRILFLGTVVDDALANKICAQLLLLAAEDPDRDIYLYINSPGGSVDAGMAIY 95
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTMQ+++ ++T +G AASMG LL AG KG R+ALP+ARI++HQP GG G AS I
Sbjct: 96 DTMQYVQCDVATVALGLAASMGQFLLCAGAKGKRYALPHARIMMHQPLGGIGGTASLIAI 155
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ ++ KR L ++ ++ G+ E +E+ DR+ SA EA ++G +D V+ S +
Sbjct: 156 QAEQMLYAKRTLQQLISQHTGQPIERIERDSDRERWFSAEEAKEYGFIDHVVRSSRQVP 214
>gi|170516914|gb|ACB15393.1| CplP2 [Bifidobacterium longum]
Length = 233
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 161 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTAPEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRQ 233
>gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
Length = 200
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 134/199 (67%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTMQ++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A +I++IK LN GK++E +EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEANEILRIKEMLNRSMAAMTGKSFETIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA D+G++D+V+ +
Sbjct: 181 AEEAKDYGLIDRVISHPNE 199
>gi|325280713|ref|YP_004253255.1| ATP-dependent Clp protease proteolytic subunit [Odoribacter
splanchnicus DSM 20712]
gi|324312522|gb|ADY33075.1| ATP-dependent Clp protease proteolytic subunit [Odoribacter
splanchnicus DSM 20712]
Length = 225
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 135/204 (66%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + P ++E+ + D++SRL+ +RI+F+ I+D +A +I AQLLFL
Sbjct: 22 LHRFQTATNSYITPNIIEERQLNIATMDVFSRLMMDRIIFLGVPIDDDVANIIMAQLLFL 81
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +P ++I LY NSPGG + AG+ IYDTMQ+I ++T C G AASM ++L++AG KG
Sbjct: 82 ETADPGRDIQLYFNSPGGSIYAGLGIYDTMQYINCDVATICTGLAASMAAVLMTAGTKGK 141
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R AL ++RI++HQP G GQA+DIE ++++ K+K+ L I ++ G+ Y++VEK DR
Sbjct: 142 RSALTHSRIMIHQPMSGVQGQAADIEITSREVQKLKKELYTIISEHSGQPYKKVEKDSDR 201
Query: 187 DHIMSASEACDWGVVDKVLMSRID 210
D+ M+A+EA ++G++D +L
Sbjct: 202 DYWMTAAEAKEYGMIDSILTRAKK 225
>gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 200
Score = 197 bits (502), Expect = 6e-49, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTMQ++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A++I++IK LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNRSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A +A ++G++D+V+ +
Sbjct: 181 AEDAKNYGLIDRVIAHPNE 199
>gi|213962584|ref|ZP_03390846.1| Clp protease [Capnocytophaga sputigena Capno]
gi|213954910|gb|EEB66230.1| Clp protease [Capnocytophaga sputigena Capno]
Length = 219
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 137/205 (66%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + P ++E+ D++SRL+ +RI+F+ + D +A ++ AQL
Sbjct: 15 HGVNSLYYDKIVGSMTPYIMEERQLNVAQMDVFSRLMMDRIIFLGTDVNDQVANIVTAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+I +YINSPGG V AG+ +YDTMQFIKP ++T C G AASM ++LL AG
Sbjct: 75 LFLESVDSAKDIQIYINSPGGSVYAGLGMYDTMQFIKPDVATICTGIAASMAAVLLCAGA 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
+G R ALP++R+++HQPSGG G ASD+E + ++++K+K L EI K+ + + +V K
Sbjct: 135 EGKRSALPHSRVMIHQPSGGAQGVASDMEINLKEMLKLKNELYEIIAKHSKQPFAKVYKD 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSR 208
+RD+ M A EA ++G++D+VL +
Sbjct: 195 SERDYWMIAHEAKEYGMIDEVLERK 219
>gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|115311346|sp|Q319H4|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 203
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT++++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKNYGLIDRVITHPSE 199
>gi|315224014|ref|ZP_07865855.1| ATP-dependent Clp protease proteolytic subunit [Capnocytophaga
ochracea F0287]
gi|314945985|gb|EFS97993.1| ATP-dependent Clp protease proteolytic subunit [Capnocytophaga
ochracea F0287]
Length = 219
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 87/205 (42%), Positives = 137/205 (66%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + P ++E+ D++SRL+ +RI+F+ + D +A ++ AQL
Sbjct: 15 HGVNSLYYDKIIDSMTPYIMEERQLNVAQMDVFSRLMMDRIIFLGTDVNDQVANIVTAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+I +YINSPGG V AG+ IYDTMQFIKP ++T C G AASM ++LL AG
Sbjct: 75 LFLESVDSAKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAGT 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
+G R ALP++R+++HQPSGG G ASD+E + ++++K+K L EI K+ + + +V K
Sbjct: 135 EGKRSALPHSRVMIHQPSGGAQGVASDMEINLKEMLKLKNELYEIIAKHSKQPFAKVYKD 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMSR 208
+RD+ M A EA ++G++D+VL +
Sbjct: 195 SERDYWMIAREAKEYGMIDEVLERK 219
>gi|260060592|ref|YP_003193672.1| ATP-dependent Clp protease, proteolytic subunit [Robiginitalea
biformata HTCC2501]
gi|88784722|gb|EAR15891.1| ATP-dependent Clp protease, proteolytic subunit [Robiginitalea
biformata HTCC2501]
Length = 195
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 136/195 (69%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G+ P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFL + + K+I
Sbjct: 1 MGMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGISDQVANIVQAQLLFLASADSSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASM ++LL AGEKG R L ++R+
Sbjct: 61 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMAAVLLCAGEKGKRSGLQHSRV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G GQASDIE A++++KIK L +I K+ G+ ++ +++ DRD+ M A EA
Sbjct: 121 MIHQPLSGAQGQASDIEIAAREVLKIKDELYQIISKHSGQPFDRIQEDSDRDYWMKAGEA 180
Query: 196 CDWGVVDKVLMSRID 210
++G++D++L D
Sbjct: 181 LEYGMIDEILERDKD 195
>gi|330040589|ref|XP_003239964.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
gi|327206890|gb|AEA39066.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
Length = 232
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 89/195 (45%), Positives = 135/195 (69%), Gaps = 3/195 (1%)
Query: 14 VFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP V + DIY+RL +ERI+F+ +I+D +A I A +L+L++E+
Sbjct: 36 RMMPIGVPKVAYRIPGSSSADWIDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSES 95
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K I LYINSPGG V +G+A+YDT+Q +K + T +G AASM S +L++G+KG R AL
Sbjct: 96 NSKPIYLYINSPGGSVISGLALYDTIQHVKSEVITVNIGLAASMASFILASGKKGKRLAL 155
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++R+++HQP GG GQASDIE AQ I+KIK+ L E Y + GK YE+V + +DRD+ M
Sbjct: 156 PHSRVMIHQPMGGAHGQASDIEVEAQQILKIKKTLTEDYARMTGKPYEKVLQDMDRDNFM 215
Query: 191 SASEACDWGVVDKVL 205
S+ EA ++G++D+++
Sbjct: 216 SSHEALEYGLIDRII 230
>gi|255038319|ref|YP_003088940.1| Endopeptidase Clp [Dyadobacter fermentans DSM 18053]
gi|254951075|gb|ACT95775.1| Endopeptidase Clp [Dyadobacter fermentans DSM 18053]
Length = 224
Score = 197 bits (502), Expect = 7e-49, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 133/191 (69%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ V+E+ R D++SRL+ +RI+F+ ++D++A +I AQLLFLE+ +P+K+I
Sbjct: 32 NMTRSVIEERPMNFREVDVFSRLMADRIIFMGTGVDDNIANIIVAQLLFLESADPKKDIL 91
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ+++P ++T C AASMG++LL+ G G R ALP+AR++
Sbjct: 92 MYINSPGGSVYAGLGIYDTMQYVRPDVATVCTSLAASMGAVLLAGGAAGKRSALPHARVM 151
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G + DIE ++IVK++ L EI + G+T E++ DRD + A EA
Sbjct: 152 IHQPSGGAQGTSVDIEITTREIVKLRHELYEILAHHTGQTPEQIALDSDRDKWLKALEAK 211
Query: 197 DWGVVDKVLMS 207
++G++D+VL
Sbjct: 212 EYGLIDEVLTR 222
>gi|39977745|ref|XP_370260.1| hypothetical protein MGG_06757 [Magnaporthe oryzae 70-15]
gi|145013724|gb|EDJ98365.1| hypothetical protein MGG_06757 [Magnaporthe oryzae 70-15]
Length = 274
Score = 197 bits (501), Expect = 7e-49, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 140/199 (70%), Gaps = 7/199 (3%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V E T G R+ DI+S+LL+ERIV + G I+D + AQLL+LE ++P K I+LY
Sbjct: 49 MPLVTEVTAGGWRTSDIFSKLLQERIVCLNGPIDDWTQASVTAQLLWLEQDSPHKPITLY 108
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V++G+AIYDTM +I P+ T C+G AASMG++LL G G R+ALP+++I++H
Sbjct: 109 INSPGGQVSSGLAIYDTMNYISSPVHTVCVGMAASMGAILLLGGAAGQRYALPHSQIMVH 168
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN----CGKTY---EEVEKTLDRDHIMS 191
QP G GQASDI +A+ I +I+ ++N+I ++ G+ +EV++ ++RD ++
Sbjct: 169 QPLGSTQGQASDIIIYAKQITRIRSQINDIMRRHLNTAAGRERFAAQEVDEMMERDKYLT 228
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA + G+VDK+L SR D
Sbjct: 229 ADEAVELGIVDKILTSRSD 247
>gi|256832188|ref|YP_003160915.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603]
gi|256685719|gb|ACV08612.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603]
Length = 235
Score = 197 bits (501), Expect = 9e-49, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 131/194 (67%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F+ Q++D A + AQLL LE++ P ++I L
Sbjct: 33 VLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLVLESQEPNRDIIL 92
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+I + T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 93 YINSPGGSFTAMTAIYDTMQYITSEVQTVCLGQAASSAAVLLAAGSPGKRLALPNARVLI 152
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQPS QASDIE HA +I++++ L + + GK +E+ ++RD I+SA EA
Sbjct: 153 HQPSLSGGGYAQASDIEIHANEILRMREWLEDTLAVHTGKPIDEIRTDIERDKILSAQEA 212
Query: 196 CDWGVVDKVLMSRI 209
++G+VD+VL SR
Sbjct: 213 VEYGLVDQVLESRK 226
>gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 200
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 94/199 (47%), Positives = 140/199 (70%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG + QASDIE A++I++IK LN + G+T+E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQTFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A+EA D+G++D+V+ +
Sbjct: 181 AAEAKDYGLIDRVIAHPNE 199
>gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460518|sp|Q7V8M4|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/199 (46%), Positives = 140/199 (70%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG + QASDIE A++I++IK LN + G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A+EA D+G++D+V+ +
Sbjct: 181 AAEAKDYGLIDRVIAHPNE 199
>gi|296270441|ref|YP_003653073.1| endopeptidase Clp [Thermobispora bispora DSM 43833]
gi|296093228|gb|ADG89180.1| Endopeptidase Clp [Thermobispora bispora DSM 43833]
Length = 217
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 88/196 (44%), Positives = 128/196 (65%), Gaps = 4/196 (2%)
Query: 23 VEQTNRGE---RSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+E +R + R D +Y LL+ERIV + Q+ D +A ICAQLL L AE+ +++I +Y
Sbjct: 18 IEARSRDDFPSRLEDQLYQWLLRERIVVLGSQVTDEVANRICAQLLLLAAEDEERDIWMY 77
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VT+GMAIYD MQ++ + T MG AASMG LL AG +G R+ALP+ARI++H
Sbjct: 78 INSPGGSVTSGMAIYDMMQYVPNDVCTVAMGLAASMGQFLLCAGTRGKRYALPHARIMMH 137
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+D+ A+ ++ +K+ L E + G+T E++E+ DRD +A EA +
Sbjct: 138 QPSGGIGGTAADVAIQAEQMLYVKKTLAERIAYHTGQTVEQIERDSDRDRWFTAEEAKAY 197
Query: 199 GVVDKVLMSRIDIEEK 214
G +D V+ S + +
Sbjct: 198 GFIDHVVRSARQVPSQ 213
>gi|307102787|gb|EFN51055.1| hypothetical protein CHLNCDRAFT_141566 [Chlorella variabilis]
Length = 258
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 90/188 (47%), Positives = 131/188 (69%), Gaps = 6/188 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMVVE R + S+L +RIV + G ++D MA LI AQLL+L++ +P ++I+LYI
Sbjct: 71 PMVVE------RFQQVISQLFSQRIVRLGGPVDDDMANLIVAQLLYLDSADPNRDITLYI 124
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ LL++G +G R++LPN+RI++HQ
Sbjct: 125 NSPGGSVTAGMAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGHQGKRYSLPNSRIMIHQ 184
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A +I+ K LN + G++ + + DRD MSA EA ++G
Sbjct: 185 PLGGAQGQAADIEIQANEILHHKLTLNGYLAEFTGQSMDTITADTDRDFFMSAQEAVEYG 244
Query: 200 VVDKVLMS 207
++D V+
Sbjct: 245 LIDAVVSK 252
>gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460515|sp|Q7V0F1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 201
Score = 197 bits (500), Expect = 1e-48, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT++++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKNYGLIDRVISHPSE 199
>gi|120434592|ref|YP_860283.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii
KT0803]
gi|117576742|emb|CAL65211.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii
KT0803]
Length = 225
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 92/191 (48%), Positives = 137/191 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
G+ P ++E+ + D++SRL+ +RI+F+ I + +A ++ AQLLFLE+ + K+I
Sbjct: 33 GMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINEQVANIVQAQLLFLESTDASKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AGE G R LP++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGEDGKRSGLPHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++IV +K L +I K+ G+TYE+V + DRD+ M A +A
Sbjct: 153 IHQPMGGAQGQASDIEITAREIVTLKEELYKIIAKHSGQTYEKVHEDSDRDYWMKAEKAK 212
Query: 197 DWGVVDKVLMS 207
++G++D++L
Sbjct: 213 EYGMIDEILKR 223
>gi|84494299|ref|ZP_00993418.1| ATP-dependent Clp protease proteolytic subunit 1 [Janibacter sp.
HTCC2649]
gi|84383792|gb|EAP99672.1| ATP-dependent Clp protease proteolytic subunit 1 [Janibacter sp.
HTCC2649]
Length = 206
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 93/176 (52%), Positives = 128/176 (72%), Gaps = 1/176 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+F+ ++ D A ICAQ+L L AE+ +K+I LYINSPGG VTAGMAI+D
Sbjct: 21 IYNRLLKERIIFLGSEVRDDNANAICAQMLLLAAEDSEKDIWLYINSPGGSVTAGMAIFD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++ ++T MG AASMG LLSAG G R A P+AR+++HQPSGG G ASDI+
Sbjct: 81 TMQWVPNDVATVAMGMAASMGQFLLSAGTPGKRHATPHARVMMHQPSGGIGGTASDIKIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ ++ IK+++ E+ ++ G+T E++E+ DRD +ASEA ++G VD V SR D
Sbjct: 141 AEQLLHIKKQMAELIAEHTGQTPEQIEEDSDRDRWFTASEAKEYGFVDHVF-SRAD 195
>gi|322690866|ref|YP_004220436.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. longum JCM 1217]
gi|320455722|dbj|BAJ66344.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. longum JCM 1217]
Length = 233
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG + A AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMMAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 161 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTAPEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRQ 233
>gi|195640846|gb|ACG39891.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
Length = 281
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 88 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYV 141
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 142 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 201
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD+ MSA EA ++G
Sbjct: 202 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYG 261
Query: 200 VVDKVL 205
++D V+
Sbjct: 262 LIDGVI 267
>gi|317970581|ref|ZP_07971971.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 200
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 134/199 (67%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSDDNS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I+++K LN G+ E++EK DRD+ MS
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRMKDMLNNSMAGMTGQPVEKIEKDTDRDYFMS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAMNYGLIDRVIAHPNE 199
>gi|298207459|ref|YP_003715638.1| ATP-dependent Clp protease proteolytic subunit 2 [Croceibacter
atlanticus HTCC2559]
gi|83850095|gb|EAP87963.1| ATP-dependent Clp protease proteolytic subunit 2 [Croceibacter
atlanticus HTCC2559]
Length = 224
Score = 196 bits (499), Expect = 1e-48, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 137/192 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+GL P ++E+ +D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 32 VGLTPNIIEERQMNIAIFDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESTDANKDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG +G R LP++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGAEGKRSGLPHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ +K L +I K+ G+ Y++V + DRD+ M A +A
Sbjct: 152 MIHQPLGGAQGQASDIEITAREILTLKEELYKIISKHSGQPYDKVYEDSDRDYWMKADKA 211
Query: 196 CDWGVVDKVLMS 207
++G++D+VL
Sbjct: 212 KEYGMIDEVLKR 223
>gi|226307301|ref|YP_002767261.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229493206|ref|ZP_04386998.1| Clp protease [Rhodococcus erythropolis SK121]
gi|226186418|dbj|BAH34522.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229319937|gb|EEN85766.1| Clp protease [Rhodococcus erythropolis SK121]
Length = 220
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/209 (43%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S G A + + ++P EQT+ G ++ D Y++L +ERI+F+ Q++D A + A
Sbjct: 9 SLGGQAPSGPQSRY--ILPQFTEQTSYGVKTSDPYNKLFEERIIFLGSQVDDVSANDLMA 66
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P ++I++YINSPGG TA MAIYDTMQ+++ IST C+GQAAS ++LL+
Sbjct: 67 QLLVLESQDPDRDITMYINSPGGSFTALMAIYDTMQYVRADISTVCLGQAASAAAVLLAG 126
Query: 122 GEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G RFALPN+RIL+HQP+ G GQ SD+E A +I +++R + + GK E +
Sbjct: 127 GTPGKRFALPNSRILIHQPATGGIQGQVSDLEIQAAEIERMRRLMESTLSLHTGKDPETI 186
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A +A ++G++D VL R
Sbjct: 187 RVDTDRDKILTAEQAKEYGIIDDVLAYRK 215
>gi|242035957|ref|XP_002465373.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
gi|241919227|gb|EER92371.1| hypothetical protein SORBIDRAFT_01g037430 [Sorghum bicolor]
Length = 283
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 90 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYV 143
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 144 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 203
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD+ MSA EA ++G
Sbjct: 204 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYG 263
Query: 200 VVDKVL 205
++D V+
Sbjct: 264 LIDGVI 269
>gi|297626027|ref|YP_003687790.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921792|emb|CBL56352.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 229
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/209 (40%), Positives = 133/209 (63%), Gaps = 5/209 (2%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G + +P E+T+ G R D Y++L ++RI+F+ I D +A + AQLL
Sbjct: 22 GGLATSPSAEY--YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGAPITDDVANAVMAQLL 79
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L++ + + IS+YINSPGG TA AIYDTMQ++KP + T C+GQAAS ++LL+AG K
Sbjct: 80 SLQSMDVDRPISIYINSPGGSFTALTAIYDTMQYLKPAVQTICLGQAASAAAVLLAAGAK 139
Query: 125 GMRFALPNARILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPN+RIL+HQP+ GQ+SD+E A++I++I+ + ++ G+ E +
Sbjct: 140 GQRLALPNSRILIHQPAISGEGSYGQSSDLEIQAKEILRIRSLMEQMLADATGQPVERIN 199
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRID 210
+ ++RD ++A EA ++G++D +L S D
Sbjct: 200 RDVERDKYLTAEEAKEYGLIDDILTSLKD 228
>gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460509|sp|Q7U5Q2|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
WH 8102]
Length = 200
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I+++K LN G++++++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA D+G++D+V+ +
Sbjct: 181 AEEAKDYGLIDRVISHPNE 199
>gi|271968524|ref|YP_003342720.1| endopeptidase Clp [Streptosporangium roseum DSM 43021]
gi|270511699|gb|ACZ89977.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021]
Length = 214
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/197 (46%), Positives = 139/197 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE+ +P ++IS+
Sbjct: 15 VLPSFVERTSYGVKEMNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLESLDPDRDISV 74
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA MAIYDTMQF++P I T C+GQAAS ++LL+ G G RFALPNAR+L+
Sbjct: 75 YINSPGGSFTAMMAIYDTMQFVRPEIQTVCLGQAASAAAILLAGGTAGKRFALPNARMLI 134
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS GQ SDIE A++I++++ ++ I ++ GKT EV K ++RD I+ A EA
Sbjct: 135 HQPSTEGGGQGSDIEIQAREILRMRSQMETILARHSGKTPAEVRKDIERDKILDAEEAKA 194
Query: 198 WGVVDKVLMSRIDIEEK 214
+G++D ++ SR + +
Sbjct: 195 YGLIDDIIPSRKKLAKA 211
>gi|19553610|ref|NP_601612.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|62391254|ref|YP_226656.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|145296394|ref|YP_001139215.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum R]
gi|41326594|emb|CAF21076.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP1
[Corynebacterium glutamicum ATCC 13032]
gi|140846314|dbj|BAF55313.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 197
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 90/173 (52%), Positives = 124/173 (71%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++ RLL ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIY
Sbjct: 17 DVFDRLLSERIIFLGSQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIY 76
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM++ I+T+ MG AASMG LLS G KG RFALP+ARI++HQPS G G A+DI
Sbjct: 77 DTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAI 136
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ KR + ++ ++ G+T+E++ K DRD +A EA D+G+VD V+
Sbjct: 137 QAEQFAATKREMAQLIAEHTGQTFEQISKDSDRDRWFTAQEAKDYGLVDHVIT 189
>gi|119473285|ref|ZP_01614937.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
gi|119444508|gb|EAW25828.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
Length = 173
Score = 196 bits (499), Expect = 2e-48, Method: Composition-based stats.
Identities = 105/171 (61%), Positives = 135/171 (78%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
KERI+F+TGQ+ED+MA LI AQ+LFLE+ENP K+I LYINSPGG VTAGMAIYDTM FI
Sbjct: 2 FKERIIFLTGQVEDNMANLILAQMLFLESENPDKDIFLYINSPGGSVTAGMAIYDTMNFI 61
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP +ST C+GQAASMG+ LL+AG KG RF LPN+R+++HQP GGF GQASD E HA++I+
Sbjct: 62 KPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGFQGQASDFEIHAKEIL 121
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
IK +LN + ++ G+ + + K DRD+ MSASEA ++G+VD V +R
Sbjct: 122 SIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEAVEYGLVDSVFANRDK 172
>gi|119953393|ref|YP_945602.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae
91E135]
gi|119862164|gb|AAX17932.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae
91E135]
Length = 199
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 95/195 (48%), Positives = 139/195 (71%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP VVE T ER +DIYSRLL++RI+F++G+I D A + AQLLFLE+E+ +
Sbjct: 4 EYMHNLVPTVVEHTGNYERVFDIYSRLLRDRIIFLSGEINDVRADTVIAQLLFLESEDSK 63
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGG +TAG+AIYDTMQ+IKP + T C+GQAASM + LL+ G G R +L
Sbjct: 64 KDIYVYINSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMAAFLLAGGAIGKRESLSY 123
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQASDI A +I+++KR + +I G + E++ ++RD+ M+
Sbjct: 124 SRIMIHQPWGGIGGQASDISIQANEIIRLKRLIIDIMSDKIGVSKEKLSLDIERDYFMTP 183
Query: 193 SEACDWGVVDKVLMS 207
+A D+G++D +L+
Sbjct: 184 KDALDYGIIDGILVR 198
>gi|332169553|gb|AEE18808.1| Endopeptidase Clp [Krokinobacter diaphorus 4H-3-7-5]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 136/191 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GL P ++E+ +D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 33 GLTPNIIEERQMNIAIFDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESTDANKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG KG R LP++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGAKGKRSGLPHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++I+ +K+ L +I K+ G+ Y++V DRD+ M A +A
Sbjct: 153 IHQPMGGAQGQASDIEITAKEILTLKKELYDIIAKHSGQDYDKVYNDSDRDYWMKADKAL 212
Query: 197 DWGVVDKVLMS 207
++G++D++L
Sbjct: 213 EYGMIDEILKR 223
>gi|307128583|ref|YP_003880613.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia
muelleri CARI]
gi|306483045|gb|ADM89915.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia
muelleri CARI]
Length = 217
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/205 (40%), Positives = 140/205 (68%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+S++ + + + P ++E+ D++SRL+ +RI+F+ I+D +A ++
Sbjct: 12 ISYKKINRSYLNNYIQSMTPYIMEERKSNVFQMDVFSRLMMDRIIFLGTPIDDKIANIVQ 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFL++ + K+I +YINSPGG V +G+ IYDTMQ +KP IST C G AASM ++LL
Sbjct: 72 AQLLFLQSLDSNKDIQIYINSPGGSVYSGLGIYDTMQILKPEISTICTGIAASMAAILLC 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G+KG R L ++R+L+HQP G GQ+SD+E ++I+K+K+ LN I ++ + +E+V
Sbjct: 132 SGKKGKRSILKHSRVLIHQPIGYAKGQSSDMEITVREILKLKKELNNIISEHTNQPFEKV 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVL 205
+K DRD+ M++ EA ++G+VD++L
Sbjct: 192 QKDSDRDYWMTSEEAKNYGIVDEIL 216
>gi|237785951|ref|YP_002906656.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758863|gb|ACR18113.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
kroppenstedtii DSM 44385]
Length = 212
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 90/179 (50%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ ++ D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 34 VFERLLRERIIFLGTEVNDDIANRLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 93
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM + I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQPS G G A+DI
Sbjct: 94 TMTYAPCDIATYGMGLAASMGQFLLTAGTKGKRYALPHARILMHQPSAGVGGTAADIAIQ 153
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ + KR L E+ ++ G++ E ++K DRD A EA ++G VD V+ S + E
Sbjct: 154 AEQFARTKRDLAELNAQHTGQSLERIQKDSDRDRWFDAQEALEYGFVDHVITSAKEETE 212
>gi|86130754|ref|ZP_01049353.1| ATP-dependent Clp protease proteolytic subunit [Dokdonia
donghaensis MED134]
gi|85818165|gb|EAQ39325.1| ATP-dependent Clp protease proteolytic subunit [Dokdonia
donghaensis MED134]
Length = 224
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/191 (48%), Positives = 137/191 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GL P ++E+ +D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 33 GLTPNIIEERQMNIAIFDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESTDANKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AGEKG R LP++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGEKGKRSGLPHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++I+ +K+ L +I K+ G+ Y++V DRD+ M A +A
Sbjct: 153 IHQPMGGAQGQASDIEITAKEILTLKKELYDIIAKHSGQDYDKVYNDSDRDYWMKADKAL 212
Query: 197 DWGVVDKVLMS 207
++G++D++L
Sbjct: 213 EYGMIDEILKR 223
>gi|330719338|ref|ZP_08313938.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc fallax
KCTC 3537]
Length = 202
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 102/199 (51%), Positives = 138/199 (69%), Gaps = 2/199 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RI+ V G++ED MAT I AQLLFLEA++ KEIS+YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLEAQDSDKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG+AI DTM+FIK P++T MG AASMG+++ S+G KG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLAIVDTMRFIKAPVTTIVMGLAASMGTIIASSGTKGKRFMLPNAEYLIHQ 122
Query: 140 PSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ AQ + K + RLN+I +N G+ E++ +RD+ MSA E D
Sbjct: 123 PMGGAAGGTQQTDMAIIAQQLTKTRERLNKILSENSGQPLEQIRNDTERDYWMSAEETLD 182
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++D +L ++ +
Sbjct: 183 YGLIDGILTQSGEMPVTKQ 201
>gi|60683331|ref|YP_213475.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
fragilis NCTC 9343]
gi|81313617|sp|Q5L8L6|CLPP_BACFN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60494765|emb|CAH09571.1| putative ATP-dependent CLP protease proteolytic subunit
[Bacteroides fragilis NCTC 9343]
Length = 207
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 136/191 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 17 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 76
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM S+LL AG KG R ALP++R+++
Sbjct: 77 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALPHSRVMI 136
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + G ++++V DRD+ M+A EA +
Sbjct: 137 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMTAQEAKE 196
Query: 198 WGVVDKVLMSR 208
+G++D+VL+ +
Sbjct: 197 YGMIDEVLIKK 207
>gi|269955920|ref|YP_003325709.1| endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
gi|269304601|gb|ACZ30151.1| Endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
Length = 236
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 93/207 (44%), Positives = 143/207 (69%), Gaps = 4/207 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G A + ++P E+T G + D Y++L ++RI+F+ Q++D A + AQLL
Sbjct: 25 GVALPGPSSRY--VLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLL 82
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE+++P ++I +YINSPGG TA A+YDTMQ+IKP I T C+GQAAS ++LL+AG+K
Sbjct: 83 VLESQDPDRDIMMYINSPGGSFTAMTALYDTMQYIKPQIQTVCLGQAASAAAVLLAAGQK 142
Query: 125 GMRFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R+ALPNAR+L+HQP+ QASDIE HA ++++++ L E + G+T E+V++
Sbjct: 143 GKRYALPNARVLIHQPAMEGGGYAQASDIEIHANELIRMREWLEETLASHSGRTPEQVKE 202
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
++RD I++A++A D+G+VD VL SR
Sbjct: 203 DIERDKILTAAQAKDYGLVDLVLESRK 229
>gi|25008291|sp|Q8NN01|CLPP2_CORGL RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|21325183|dbj|BAB99805.1| Protease subunit of ATP-dependent Clp proteases [Corynebacterium
glutamicum ATCC 13032]
Length = 201
Score = 196 bits (498), Expect = 2e-48, Method: Composition-based stats.
Identities = 90/173 (52%), Positives = 124/173 (71%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++ RLL ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIY
Sbjct: 21 DVFDRLLSERIIFLGSQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIY 80
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM++ I+T+ MG AASMG LLS G KG RFALP+ARI++HQPS G G A+DI
Sbjct: 81 DTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAI 140
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ KR + ++ ++ G+T+E++ K DRD +A EA D+G+VD V+
Sbjct: 141 QAEQFAATKREMAQLIAEHTGQTFEQISKDSDRDRWFTAQEAKDYGLVDHVIT 193
>gi|313675245|ref|YP_004053241.1| ATP-dependent clp protease proteolytic subunit clpp [Marivirga
tractuosa DSM 4126]
gi|312941943|gb|ADR21133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Marivirga
tractuosa DSM 4126]
Length = 222
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 136/206 (66%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
G + V+E+ R D++SRL+ +RI+F+ Q++D++A +I AQ
Sbjct: 17 LSGSMVDSYVQQVENMTRAVIEERPTNFREIDVFSRLIMDRIIFLGMQVDDNIANVITAQ 76
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LLFL++ + +K+ISLYINSPGG V AG+ IYDTM +I P + T C G AASMG++LL+ G
Sbjct: 77 LLFLQSVDAKKDISLYINSPGGSVYAGLGIYDTMHYISPDVGTICTGLAASMGAVLLAGG 136
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ R ALP+ARI++HQP G GQASD+E + + +K L I K+ GKTY++VEK
Sbjct: 137 AEKKRSALPHARIMIHQPMSGMQGQASDMEISLKQTLSVKEDLYNILSKHSGKTYKQVEK 196
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSR 208
DRD M ASEA ++G++D+VL+ +
Sbjct: 197 DSDRDFWMRASEAKEYGLIDEVLVRK 222
>gi|296139202|ref|YP_003646445.1| endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
gi|296027336|gb|ADG78106.1| Endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
Length = 195
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 76/188 (40%), Positives = 126/188 (67%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+ GER D+YS LL ER+V++ I+ +A + AQLLFLE++NP +I LY
Sbjct: 6 IPTVIERRPNGERVSDVYSYLLSERVVYLGTAIDAGVANAVVAQLLFLESDNPDSDIQLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
IN GG A +AIYDTM++I+ PI+T C+GQA ++G++LL+AG +G R ALP++R++LH
Sbjct: 66 INCEGGDPAAMLAIYDTMRYIRSPIATTCVGQAVAVGAVLLAAGARGKRVALPHSRVVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+ G D+ A ++V+++ ++ +I + G+T E + D D + + +A +
Sbjct: 126 QPAAQGRGTIPDLILQADEVVRVRGQMEQILASHTGQTAERLRADTDHDRVFTPPDAVAY 185
Query: 199 GVVDKVLM 206
G++D+V+
Sbjct: 186 GLIDEVIE 193
>gi|325676029|ref|ZP_08155712.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC
33707]
gi|325553267|gb|EGD22946.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC
33707]
Length = 195
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 91/173 (52%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++I+LYINSPGG VTAGMAIYD
Sbjct: 14 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDINLYINSPGGSVTAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + ++TF MG AASMG LLSAG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 74 TMQFAECDVATFGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGIGGTASDIAIM 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ ++ G+T E++ DRD +A EA ++G VD V+
Sbjct: 134 AEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAKEALEYGFVDHVVTR 186
>gi|163840395|ref|YP_001624800.1| ATP-dependent Clp protease proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162953871|gb|ABY23386.1| ATP-dependent endopeptidase clp proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
Length = 206
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/191 (48%), Positives = 139/191 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T GERSYD++SRL+++RIVFV +I+D +A +I AQL++LE++NP ++I+LY
Sbjct: 6 MPTVLEKTPFGERSYDVFSRLVRDRIVFVGSEIDDDVANVIMAQLIYLESDNPDEDINLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA MAI DTM F++P ++T CMGQAAS ++LL+AG KG R L ++R+LLH
Sbjct: 66 INSPGGSHTALMAILDTMDFVRPDVATVCMGQAASAAAILLAAGAKGKRSVLAHSRVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS G +D+ HA+++ +I+ +L EI ++ G++ E + RD I +A EA D+
Sbjct: 126 QPSSQGRGTLADLSVHAKEMSRIRHQLEEILAEHTGQSTEILHADTSRDKIFTAQEAVDY 185
Query: 199 GVVDKVLMSRI 209
G+ D ++ SR
Sbjct: 186 GLADAIISSRK 196
>gi|327404286|ref|YP_004345124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Fluviicola
taffensis DSM 16823]
gi|327319794|gb|AEA44286.1| ATP-dependent Clp protease proteolytic subunit ClpP [Fluviicola
taffensis DSM 16823]
Length = 222
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/195 (47%), Positives = 138/195 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L P ++E+ + D++SRL+ +RI+F+ I D +A +I AQLLFLE+ + +K+I
Sbjct: 28 SSLTPYIIEERHMNMTQMDVFSRLMMDRIIFLGTGINDQVANIINAQLLFLESVDAKKDI 87
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+Y+NSPGG V AG+ IYDTMQ+IKP ++T C G AASMG++L+ AG +G R AL +AR+
Sbjct: 88 QIYLNSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLMCAGAEGKRSALKHARV 147
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I K+K+ L +I + +TYE+V DRD+ M+A+EA
Sbjct: 148 MIHQPLGGAQGQASDIEITAREIQKLKKELYDIIATHSKQTYEKVWADSDRDYWMTAAEA 207
Query: 196 CDWGVVDKVLMSRID 210
D+G+VD++L+
Sbjct: 208 KDYGMVDEILLRNPK 222
>gi|325955073|ref|YP_004238733.1| ATP-dependent Clp protease proteolytic subunit [Weeksella virosa
DSM 16922]
gi|323437691|gb|ADX68155.1| ATP-dependent Clp protease proteolytic subunit [Weeksella virosa
DSM 16922]
Length = 222
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/210 (41%), Positives = 142/210 (67%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ G + + + P ++E+ D++SRL+ +RI+F+ I+D +A +I
Sbjct: 13 IKHSGISSLTMDSYIQAVTPYIIEERKLNVAQMDVFSRLMMDRIIFLGTAIDDQIANIIQ 72
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ + K+I +Y+NSPGG V AG+ IYDTMQ +KP ++T C G AASMG++LL+
Sbjct: 73 AQLLFLESTDATKDIQIYVNSPGGGVYAGLGIYDTMQLVKPDVATICTGMAASMGAVLLA 132
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R AL ++R+++HQP GG GQA+D+E ++I+K+K+ L +I + G+T+E++
Sbjct: 133 AGAKGKRSALKHSRVMIHQPLGGAQGQATDMEITLKEILKLKKELYDIIAYHSGQTFEQI 192
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRID 210
EK +RD+ M++ EA ++G++D+VL
Sbjct: 193 EKDGERDYWMTSEEAKNYGMIDEVLEPNRK 222
>gi|78185116|ref|YP_377551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013823|sp|Q3AVC3|CLPP3_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78169410|gb|ABB26507.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 200
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 92/199 (46%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I+++K LN G+T+E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA +G++D+V+ +
Sbjct: 181 AEEAMAYGLIDRVISHPTE 199
>gi|319947981|ref|ZP_08022158.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
gi|319438327|gb|EFV93270.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
Length = 213
Score = 196 bits (497), Expect = 2e-48, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 125/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++I++YINSPGG VTAGMAIYD
Sbjct: 31 VYERLLQERIIFLGSQVDDDIANRLCAQMLLLAAEDPSRDIAMYINSPGGSVTAGMAIYD 90
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF++ ++T+ MG AASMG LL+AG KG R+ALP+A+I++HQPS G G A+DI
Sbjct: 91 TMQFVECDVATYGMGLAASMGQFLLAAGTKGKRYALPHAKIMMHQPSAGVGGSAADIAIQ 150
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ + G+++E+V + DRD +A +A ++G VD V+
Sbjct: 151 AEQFAATKREMAELIAFHTGQSFEQVTEDSDRDRWFTAEQAKEYGFVDHVISR 203
>gi|256824760|ref|YP_003148720.1| ATP-dependent Clp protease proteolytic subunit ClpP [Kytococcus
sedentarius DSM 20547]
gi|256688153|gb|ACV05955.1| ATP-dependent Clp protease proteolytic subunit ClpP [Kytococcus
sedentarius DSM 20547]
Length = 225
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 97/199 (48%), Positives = 129/199 (64%), Gaps = 1/199 (0%)
Query: 19 VPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
P V + R D IY+RLLKERIVF+ + D A ICAQLL L AE+P +I L
Sbjct: 8 TPAVASEGARLAGLDDQIYNRLLKERIVFLGSDVRDDNANAICAQLLLLSAEDPNADIWL 67
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAGMAI+DTM +I ++T MG AASMG LLSAG G R+A P++R+++
Sbjct: 68 YINSPGGSVTAGMAIFDTMNWIPNDVATVAMGLAASMGQFLLSAGTPGKRYATPHSRVMM 127
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPSGG G ASDI+ A+ ++ IKR++ E+ ++ G+T E++ DRD +A EA D
Sbjct: 128 HQPSGGVGGTASDIKIQAEQLLHIKRQMAELIAQHTGQTAEQITLDSDRDRWFTAQEAKD 187
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G VD V + D + K
Sbjct: 188 YGFVDHVFQTSTDTHDVKK 206
>gi|53715362|ref|YP_101354.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
fragilis YCH46]
gi|253567251|ref|ZP_04844701.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
3_2_5]
gi|255011711|ref|ZP_05283837.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides
fragilis 3_1_12]
gi|265767849|ref|ZP_06095381.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacteroides
sp. 2_1_16]
gi|313149546|ref|ZP_07811739.1| endopeptidase Clp [Bacteroides fragilis 3_1_12]
gi|67460245|sp|Q64NW2|CLPP_BACFR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|52218227|dbj|BAD50820.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides
fragilis YCH46]
gi|251944082|gb|EES84601.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
3_2_5]
gi|263252521|gb|EEZ24049.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacteroides
sp. 2_1_16]
gi|301164820|emb|CBW24380.1| putative ATP-dependent CLP protease proteolytic subunit
[Bacteroides fragilis 638R]
gi|313138313|gb|EFR55673.1| endopeptidase Clp [Bacteroides fragilis 3_1_12]
Length = 220
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 91/191 (47%), Positives = 136/191 (71%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM S+LL AG KG R ALP++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMASVLLVAGAKGKRSALPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + G ++++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSGTSFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+VL+ +
Sbjct: 210 YGMIDEVLIKK 220
>gi|269956966|ref|YP_003326755.1| endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
gi|269305647|gb|ACZ31197.1| Endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
Length = 195
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 77/190 (40%), Positives = 127/190 (66%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+ Q RGER+ D+YS+LL ERIV++ I+ +A + AQLLFLE+ +P +I LY
Sbjct: 6 IPTVIAQHARGERALDVYSQLLTERIVYLGTPIDAGVANALIAQLLFLESADPDADIQLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I+ GG AG+AIYDT++++KP ++T +G+A ++G++LL+AG G R ALP+AR++LH
Sbjct: 66 IHCEGGDPGAGLAIYDTLRYVKPAVATTVVGEAVAVGAVLLAAGAPGKRAALPHARVVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+ G D+ A ++++I+ L + ++ G+ E + D D I++A +A D+
Sbjct: 126 QPAAQGRGAIPDLILQADEVLRIRSDLESVLARHTGQPVERLRADTDHDRILTAVQARDY 185
Query: 199 GVVDKVLMSR 208
G++D V+ R
Sbjct: 186 GLIDHVIAER 195
>gi|54023139|ref|YP_117381.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
gi|67460460|sp|Q5Z0M4|CLPP1_NOCFA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|54014647|dbj|BAD56017.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
Length = 197
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 125/191 (65%), Gaps = 1/191 (0%)
Query: 19 VPMVVEQTNRG-ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P V+ Q RG ER DIYS LL ERIV++ I+ +A + AQLL LE+E+P +EI+
Sbjct: 6 IPNVIAQHPRGGERITDIYSHLLAERIVYLGTPIDSGVANALIAQLLHLESESPDQEINF 65
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN GG + + +A+YDTMQ I P+ T C+GQA ++G++LL+ G G R LP+AR++L
Sbjct: 66 YINCEGGDLPSMLAVYDTMQHIGAPVHTTCVGQAIAVGAVLLAGGAPGQRAMLPHARVVL 125
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP+ G D+ A ++V+++ + I ++ G++ E++ + DRD + +A+ A +
Sbjct: 126 HQPAARGQGPIPDLILQADELVRMRSEIEAILSRHTGRSPEQLREDTDRDRVFTATAALE 185
Query: 198 WGVVDKVLMSR 208
+G++D VL R
Sbjct: 186 YGLIDTVLSPR 196
>gi|318040432|ref|ZP_07972388.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 200
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 134/199 (67%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSEDNS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP GG QASDIE A++I++IK LN+ G+ ++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSMADMTGQELAKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G++D+V+ +
Sbjct: 181 AEEAKNYGLIDRVIAHPSE 199
>gi|213692575|ref|YP_002323161.1| Endopeptidase Clp [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524036|gb|ACJ52783.1| Endopeptidase Clp [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320458727|dbj|BAJ69348.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis ATCC 15697]
Length = 233
Score = 196 bits (497), Expect = 3e-48, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G +G R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTEGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 161 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTAPEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRQ 233
>gi|222624791|gb|EEE58923.1| hypothetical protein OsJ_10573 [Oryza sativa Japonica Group]
Length = 282
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 89 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYV 142
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 143 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 202
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD+ MSA EA ++G
Sbjct: 203 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYG 262
Query: 200 VVDKVL 205
++D V+
Sbjct: 263 LIDGVI 268
>gi|297600816|ref|NP_001049902.2| Os03g0308100 [Oryza sativa Japonica Group]
gi|63003513|dbj|BAD98161.1| ATP-dependent protease [Oryza sativa Japonica Group]
gi|108707751|gb|ABF95546.1| ATP-dependent Clp protease proteolytic subunit 1, putative,
expressed [Oryza sativa Japonica Group]
gi|215740983|dbj|BAG97478.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765780|dbj|BAG87477.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674452|dbj|BAF11816.2| Os03g0308100 [Oryza sativa Japonica Group]
Length = 282
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 89 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPNKDIIMYV 142
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 143 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 202
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD+ MSA EA ++G
Sbjct: 203 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYG 262
Query: 200 VVDKVL 205
++D V+
Sbjct: 263 LIDGVI 268
>gi|227503044|ref|ZP_03933093.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|306836723|ref|ZP_07469686.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
gi|227076105|gb|EEI14068.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|304567401|gb|EFM43003.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
Length = 203
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 91/173 (52%), Positives = 126/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 24 VYERLLHERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ IST+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 84 TMKYSPCDISTYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + KR + E+ ++ G+T+E++ K DRD M+A +A ++G+VD V+ S
Sbjct: 144 AEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWMTAQQAKEYGIVDHVIES 196
>gi|312140361|ref|YP_004007697.1| clp peptidase proteolytic subunit 1 clpp1 [Rhodococcus equi 103S]
gi|311889700|emb|CBH49017.1| Clp peptidase proteolytic subunit 1 ClpP1 [Rhodococcus equi 103S]
Length = 202
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 91/173 (52%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++I+LYINSPGG VTAGMAIYD
Sbjct: 21 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDINLYINSPGGSVTAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + ++TF MG AASMG LLSAG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 81 TMQFAECDVATFGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGIGGTASDIAIM 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ ++ G+T E++ DRD +A EA ++G VD V+
Sbjct: 141 AEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAKEALEYGFVDHVVTR 193
>gi|291456562|ref|ZP_06595952.1| Clp protease [Bifidobacterium breve DSM 20213]
gi|291381839|gb|EFE89357.1| Clp protease [Bifidobacterium breve DSM 20213]
Length = 227
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 35 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 94
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 95 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 154
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 155 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTADEAK 214
Query: 197 DWGVVDKVLMSRI 209
D+G+VD+VL R
Sbjct: 215 DYGIVDEVLAHRQ 227
>gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 200
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDT+Q++K + T C+G AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE A++I+++K LN + G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMAEMSGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
+ EA D+G++D+V+ +
Sbjct: 181 SQEAMDYGLIDRVIAHPNE 199
>gi|223973663|gb|ACN31019.1| unknown [Zea mays]
Length = 280
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 87 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPTKDIIMYV 140
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 141 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 200
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD+ MSA EA ++G
Sbjct: 201 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDYFMSAKEAKEYG 260
Query: 200 VVDKVL 205
++D V+
Sbjct: 261 LIDGVI 266
>gi|284990114|ref|YP_003408668.1| endopeptidase Clp [Geodermatophilus obscurus DSM 43160]
gi|284063359|gb|ADB74297.1| Endopeptidase Clp [Geodermatophilus obscurus DSM 43160]
Length = 208
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 93/209 (44%), Positives = 144/209 (68%), Gaps = 7/209 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MSFE + + ++P VE+T+ G + + Y++L +ERI+F+ QI+D A +
Sbjct: 1 MSFEMPSSRY-------ILPSFVERTSYGMKESNPYNKLFEERIIFLGVQIDDASANDVM 53
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQL+ LE+ +P ++I++YINSPGG T+ MAIYDTM F++P I T CMGQAAS ++LL+
Sbjct: 54 AQLITLESADPDRDITIYINSPGGSFTSLMAIYDTMMFVRPDIQTVCMGQAASAAAVLLA 113
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG G R ALP +R+L+HQPSG GQ SD+E HA +I +++ ++ EI ++ G++ ++V
Sbjct: 114 AGTPGKRLALPYSRVLIHQPSGEAGGQVSDLEIHAAEIQRVRAQMEEILARHTGRSVDQV 173
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD I++A EA ++G+VD V+ SR
Sbjct: 174 RADIDRDKILTAEEAKEYGIVDAVIQSRK 202
>gi|254423169|ref|ZP_05036887.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196190658|gb|EDX85622.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 200
Score = 195 bits (496), Expect = 3e-48, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 139/197 (70%), Gaps = 4/197 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + E+ IY RL +ERI+F+T +++D +A I A +L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSTYEQWISIYERLFRERIIFLTEEVDDGIANAIVAYMLYLDSEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T CMG AASMG+ LL+AG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICMGLAASMGAFLLNAGTKGKRLALPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQPSGG QA+DIE A IV+++R LNE+ + G+T EE+E+ DRD+ MS
Sbjct: 121 SRIMIHQPSGGVGRRQATDIEIEAVRIVQVRRELNELMAAHSGRTVEEIERDSDRDNFMS 180
Query: 192 ASEACDWGVVDKVLMSR 208
A EA ++G++D+V+ R
Sbjct: 181 AEEAKEYGLIDRVIEER 197
>gi|294629345|ref|ZP_06707905.1| Clp protease [Streptomyces sp. e14]
gi|292832678|gb|EFF91027.1| Clp protease [Streptomyces sp. e14]
Length = 226
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L E+ K+ E++ + ++RD I++A EA
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIREDIERDKILTAEEAL 206
Query: 197 DWGVVDKVLMSRI 209
++G++D+++ +R
Sbjct: 207 EYGLIDQIISTRK 219
>gi|326505348|dbj|BAK03061.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 284
Score = 195 bits (496), Expect = 4e-48, Method: Composition-based stats.
Identities = 88/188 (46%), Positives = 129/188 (68%), Gaps = 6/188 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P K+I +Y+
Sbjct: 91 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANVIVAQLLYLDAVDPNKDIIMYV 144
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+RI++HQ
Sbjct: 145 NSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQ 204
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQ +D+E A +++ K LN + G+ +++ DRD MSA EA ++G
Sbjct: 205 PLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDFFMSAKEAKEYG 264
Query: 200 VVDKVLMS 207
++D V+++
Sbjct: 265 LIDGVIVN 272
>gi|146299462|ref|YP_001194053.1| endopeptidase Clp [Flavobacterium johnsoniae UW101]
gi|146153880|gb|ABQ04734.1| Endopeptidase Clp [Flavobacterium johnsoniae UW101]
Length = 224
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 135/191 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ + K+I
Sbjct: 33 NLTPNIIEERQLNVSILDVFSRLMMDRIIFLGTGIDDQIANVVQAQLLFLESADASKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V AG+ IYDTMQ+IKP ++T C G AASMG++LL AG G R ALP++R++
Sbjct: 93 IYLNSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAGAAGKRSALPHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+D+E + ++++K+K L I ++ G+++E V K +RD+ M A EA
Sbjct: 153 IHQPSGGAQGVATDMEINLREMLKLKDELYHIISQHSGQSFERVHKDSERDYWMIADEAK 212
Query: 197 DWGVVDKVLMS 207
++G++D+VL
Sbjct: 213 EYGMIDEVLRR 223
>gi|255535603|ref|YP_003095974.1| ATP-dependent Clp protease proteolytic subunit [Flavobacteriaceae
bacterium 3519-10]
gi|255341799|gb|ACU07912.1| ATP-dependent Clp protease proteolytic subunit [Flavobacteriaceae
bacterium 3519-10]
Length = 228
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 96/194 (49%), Positives = 141/194 (72%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ + K+I
Sbjct: 33 NLTPYIMEERRLNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESSDASKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ IKP +ST C G AASMG++LL AGEKG R AL ++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQIIKPDVSTICTGMAASMGAVLLVAGEKGKRSALKHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASD+E + ++++K+K+ L +I + G+TYE VEK DRD+ M++SEA
Sbjct: 153 IHQPSGGAQGVASDMEINLREMLKLKKELYDIISIHSGQTYEWVEKASDRDYWMTSSEAK 212
Query: 197 DWGVVDKVLMSRID 210
++G+VD+VL + D
Sbjct: 213 EYGMVDEVLERKTD 226
>gi|283455719|ref|YP_003360283.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
dentium Bd1]
gi|283102353|gb|ADB09459.1| clpP2 ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium dentium Bd1]
Length = 233
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQDRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L + K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLEDTLAKHTGQDVEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A+EA +G+VD+VL R
Sbjct: 214 LTAAEAKAYGIVDEVLEHRS 233
>gi|300778994|ref|ZP_07088852.1| ATP-dependent Clp protease proteolytic subunit [Chryseobacterium
gleum ATCC 35910]
gi|300504504|gb|EFK35644.1| ATP-dependent Clp protease proteolytic subunit [Chryseobacterium
gleum ATCC 35910]
Length = 228
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 95/196 (48%), Positives = 141/196 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ +P K+I
Sbjct: 33 NLTPYIMEERRLNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESADPSKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ IKP ++T C G AASMG++LL AGEKG R AL ++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQIIKPDVATICTGMAASMGAVLLVAGEKGKRSALKHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASD+E + ++++K+K+ L EI + G+TYE VEK+ DRD+ M++ EA
Sbjct: 153 IHQPSGGAQGVASDMEINLREMLKLKQELYEIIAHHSGQTYEWVEKSSDRDYWMTSEEAK 212
Query: 197 DWGVVDKVLMSRIDIE 212
+G+VD+VL + +
Sbjct: 213 GYGMVDEVLQRSTEKK 228
>gi|284990113|ref|YP_003408667.1| endopeptidase Clp [Geodermatophilus obscurus DSM 43160]
gi|284063358|gb|ADB74296.1| Endopeptidase Clp [Geodermatophilus obscurus DSM 43160]
Length = 211
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 123/181 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A + AQ+L L AE+P+++I LYINSPGG V+AGMAIYD
Sbjct: 26 VYERLLRERIIFLGTQVDDVIANQLAAQMLLLSAEDPKRDIHLYINSPGGSVSAGMAIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI ++T+ MG AASMG LL+AG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 86 TMQFIDCDVATYGMGLAASMGQFLLTAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 145
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A + K+ LNE+ + G+ E + + DRD +A EA ++G VD V+ +
Sbjct: 146 ADLFRRTKQELNELQSFHTGQPVERINEDSDRDRWFTAQEALEYGFVDHVVSRAAMTDST 205
Query: 215 S 215
+
Sbjct: 206 N 206
>gi|309801928|ref|ZP_07696043.1| endopeptidase Clp [Bifidobacterium dentium JCVIHMP022]
gi|308221484|gb|EFO77781.1| endopeptidase Clp [Bifidobacterium dentium JCVIHMP022]
Length = 233
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQDRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L + K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLEDTLAKHTGQDVEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A+EA +G+VD+VL R
Sbjct: 214 LTAAEAKAYGIVDEVLEHRS 233
>gi|149369719|ref|ZP_01889571.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit)
[unidentified eubacterium SCB49]
gi|149357146|gb|EDM45701.1| endopeptidase Clp (ATP-dependent Clp protease proteolytic subunit)
[unidentified eubacterium SCB49]
Length = 226
Score = 195 bits (495), Expect = 4e-48, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 136/192 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+GL P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFL + + ++I
Sbjct: 32 VGLTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLASVDATRDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFI P ++T C G AASMG++LL AGEKG R L ++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFITPDVATICTGMAASMGAVLLCAGEKGKRSGLTHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ +K+ L EI K+ G+ Y++V + DRD+ M A +A
Sbjct: 152 MIHQPMGGAQGQASDIEITAKEIITLKKELYEIISKHTGQDYDKVYEDSDRDYWMKADKA 211
Query: 196 CDWGVVDKVLMS 207
++G++D++L
Sbjct: 212 LEYGMIDEILTR 223
>gi|227833714|ref|YP_002835421.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
aurimucosum ATCC 700975]
gi|262184721|ref|ZP_06044142.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
aurimucosum ATCC 700975]
gi|227454730|gb|ACP33483.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
aurimucosum ATCC 700975]
Length = 199
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 126/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 20 VYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ ++T+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 80 TMKYSPCDVATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + KR + E+ ++ G+T+E++ K DRD +A +A ++G+VD V+ S
Sbjct: 140 AEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAQQAKEYGIVDHVIES 192
>gi|310287698|ref|YP_003938956.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
bifidum S17]
gi|309251634|gb|ADO53382.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
bifidum S17]
Length = 239
Score = 195 bits (495), Expect = 5e-48, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ G A ++ + ++P E+T G ++ D Y++L ++RI+F+ Q++D A I A
Sbjct: 33 ALRGAAAVSPQNRY--VLPQFSEKTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMA 90
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+A
Sbjct: 91 QLLVLESQDPSRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAA 150
Query: 122 GEKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R LPNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++
Sbjct: 151 GAKGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGQDVEKI 210
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K ++ D ++A EA D+G+VD+VL R
Sbjct: 211 RKDIEVDTFLTAQEAKDYGIVDEVLEHRS 239
>gi|269795807|ref|YP_003315262.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
gi|269097992|gb|ACZ22428.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
Length = 204
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T GER+ D+YSRLL +RIVF+ +I+D +A ++ AQL+ LE+ P + I LY
Sbjct: 7 IPSVIEKTTTGERAADVYSRLLTDRIVFLGTEIDDGVANVVVAQLIHLESVAPDQGIELY 66
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+A +AIYDT+Q+++ P+ T C+GQAAS ++LL+AGE G R LP+AR+LLH
Sbjct: 67 INSPGGSVSAMLAIYDTIQYLRAPVGTVCVGQAASSAAVLLAAGEPGRRGILPHARVLLH 126
Query: 139 QPSGGFSGQA-SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
PS A D+E A++I +++ ++EI + G+ + RD I +A +A
Sbjct: 127 PPSTSSGRGALPDLEIQAKEIQRVRDEVDEILAAHTGQDQAVLRADTSRDRIFTAQQAVA 186
Query: 198 WGVVDKVLMSRI 209
+G+VD+V+ SR
Sbjct: 187 YGLVDEVVASRK 198
>gi|269125773|ref|YP_003299143.1| endopeptidase Clp [Thermomonospora curvata DSM 43183]
gi|268310731|gb|ACY97105.1| Endopeptidase Clp [Thermomonospora curvata DSM 43183]
Length = 213
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 87/180 (48%), Positives = 125/180 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ +LL++RIVF+ Q++D +A ICA+LL L AE+ +++I LYINSPGG VTAGMAIYD
Sbjct: 30 LFQQLLRKRIVFLGQQVDDDIANRICAELLLLSAEDGERDIYLYINSPGGSVTAGMAIYD 89
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
MQ++ ++T +G AASMG LL AG G R+ALP+ARI++HQPSGG G ASDI+
Sbjct: 90 IMQYVPNDVATVGIGLAASMGQFLLCAGAPGKRYALPHARIMMHQPSGGIGGTASDIKIQ 149
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ ++ +KR L E + G+T E++E+ DRD +A EA +G VD V+ S + +
Sbjct: 150 AEQMLYVKRTLAERIALHTGQTVEQIERDSDRDRWFTAEEAKAYGFVDHVVRSANQVPSE 209
>gi|187918471|ref|YP_001884034.1| ATP-dependent Clp protease proteolytic subunit [Borrelia hermsii
DAH]
gi|119861319|gb|AAX17114.1| ATP-dependent Clp protease proteolytic subunit [Borrelia hermsii
DAH]
Length = 199
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 94/195 (48%), Positives = 139/195 (71%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVP VVE T ER +DIYSRLL++RI+F++G+I D A + AQLLFLE+E+ +
Sbjct: 4 EYMHNLVPTVVEYTGNYERVFDIYSRLLRDRIIFLSGEINDIRADTVIAQLLFLESEDSK 63
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +YINSPGG +T+G+AIYDTMQ+IKP + T C+GQAASM + LL+ G G R +L
Sbjct: 64 KDIYVYINSPGGSITSGLAIYDTMQYIKPDVRTICIGQAASMAAFLLAGGAIGKRESLSY 123
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQASDI A +I+++KR + +I G + E++ ++RD+ M+
Sbjct: 124 SRIMIHQPWGGIGGQASDISIQANEIIRLKRLIIDIMSNKIGVSKEKLSLDIERDYFMTP 183
Query: 193 SEACDWGVVDKVLMS 207
+A D+G++D +L+
Sbjct: 184 KDALDYGIIDGILVR 198
>gi|311064596|ref|YP_003971321.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
bifidum PRL2010]
gi|310866915|gb|ADP36284.1| ClpP2 ATP-dependent Clp protease proteolytic subunit
[Bifidobacterium bifidum PRL2010]
Length = 239
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ G A ++ + ++P E+T G ++ D Y++L ++RI+F+ Q++D A I A
Sbjct: 33 ALRGGAAVSPQNRY--VLPQFSEKTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMA 90
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+A
Sbjct: 91 QLLVLESQDPSRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAA 150
Query: 122 GEKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R LPNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++
Sbjct: 151 GAKGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGQDVEKI 210
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K ++ D ++A EA D+G+VD+VL R
Sbjct: 211 RKDIEVDTFLTAQEAKDYGIVDEVLEHRS 239
>gi|300780629|ref|ZP_07090484.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
gi|300533615|gb|EFK54675.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
Length = 193
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 126/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 14 VYERLLRERIIFLGQQVDDEIANKLCAQILLLSAEDPNRDISLYINSPGGSVTAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLS G KG RFALP+ARI++HQPS G G A+DI
Sbjct: 74 TMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTAADIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + K+ + E+ ++ G+++E++ K DRD +A EA D+G+VD V+ +
Sbjct: 134 AEQFAQTKKEMAELIAEHTGQSFEQITKDSDRDRWFTAQEAKDYGIVDHVISN 186
>gi|224283328|ref|ZP_03646650.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
bifidum NCIMB 41171]
gi|313140480|ref|ZP_07802673.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
bifidum NCIMB 41171]
gi|313132990|gb|EFR50607.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
bifidum NCIMB 41171]
Length = 239
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 86/209 (41%), Positives = 141/209 (67%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+ G A ++ + ++P E+T G ++ D Y++L ++RI+F+ Q++D A I A
Sbjct: 33 ALRGAAAVSPQNRY--VLPQFSEKTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMA 90
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+A
Sbjct: 91 QLLVLESQDPSRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAA 150
Query: 122 GEKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G KG R LPNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++
Sbjct: 151 GAKGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGQDVEKI 210
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K ++ D ++A EA D+G+VD+VL R
Sbjct: 211 RKDIEVDTFLTAQEAKDYGIVDEVLEHRS 239
>gi|111221348|ref|YP_712142.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Frankia alni ACN14a]
gi|111148880|emb|CAJ60559.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Frankia alni ACN14a]
Length = 213
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Query: 27 NRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+G ++D +++RLL RIVF+ +ED +A ICAQLL L AE+P ++I LYINSPGG
Sbjct: 20 GQGGPAFDDQVFNRLLANRIVFLGSVVEDSIANAICAQLLLLNAEDPTRDIFLYINSPGG 79
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMAIYDTMQF++ ++T +G AASMG LL AG G R++LP+ARI++HQPSGG
Sbjct: 80 SVSAGMAIYDTMQFVENDVATVSLGLAASMGQFLLCAGAPGKRYSLPHARIMMHQPSGGI 139
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G ASDI A+ ++ KR + E + G+ E++E+ DRD +A EA D+G VD V
Sbjct: 140 GGTASDIAIQAEQMLYTKRMMQERIAFHTGQPIEQIERDSDRDRWFTAEEAKDYGFVDHV 199
Query: 205 LMSRIDIEEK 214
+ + +
Sbjct: 200 VQQARQVPSE 209
>gi|203284513|ref|YP_002222253.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii
Ly]
gi|203288047|ref|YP_002223062.1| ATP-dependent Clp protease proteolytic component [Borrelia
recurrentis A1]
gi|201083956|gb|ACH93547.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii
Ly]
gi|201085267|gb|ACH94841.1| ATP-dependent Clp protease proteolytic component [Borrelia
recurrentis A1]
Length = 199
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 137/193 (70%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVP VVE T ER +DIYSRLL++RI+F++G+I D + AQLLFLE+E+ +K+
Sbjct: 6 MHNLVPTVVEHTGNYERVFDIYSRLLRDRIIFLSGEINDLRGDTVIAQLLFLESEDSKKD 65
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +TAG+AIYDTMQ+IKP + T C+GQAASM + LL+ G G R +L +R
Sbjct: 66 IYLYINSPGGSITAGLAIYDTMQYIKPDVRTICIGQAASMAAFLLAGGAVGKRESLSYSR 125
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQASDI A +I+++KR + +I + G + E++ ++RD+ M+
Sbjct: 126 IMIHQPWGGIGGQASDISIQANEIIRLKRLIIDIMSEKIGVSKEKLALDIERDYFMTPEG 185
Query: 195 ACDWGVVDKVLMS 207
A ++G++D +L+
Sbjct: 186 ALNYGIIDSILVR 198
>gi|163841992|ref|YP_001626397.1| ATP-dependent Clp protease proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162955468|gb|ABY24983.1| ATP-dependent endopeptidase clp proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
Length = 227
Score = 194 bits (494), Expect = 5e-48, Method: Composition-based stats.
Identities = 94/207 (45%), Positives = 141/207 (68%), Gaps = 4/207 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G A+ + ++P E+T G + D Y++L ++RI+F+ Q++D A I AQLL
Sbjct: 15 GAAENLPTSRY--ILPQFEERTPYGFKRQDPYTKLFEDRIIFLGVQVDDASADDIMAQLL 72
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE+ +P ++I+LYINSPGG TA AIYDTMQ+I+P I T C+GQAAS ++LL+AG
Sbjct: 73 VLESTDPDRDITLYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAAAVLLAAGTP 132
Query: 125 GMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPNAR+L+HQP SGG GQASD+E A ++++++ L + + G T E++
Sbjct: 133 GKRLALPNARVLIHQPALSGGQGGQASDLEIQANEVMRMRSWLEDTLAMHSGLTPEQLNN 192
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
++RD I++A+EA D+G++D+VL SR
Sbjct: 193 DIERDKILTAAEALDYGLIDQVLESRK 219
>gi|154509334|ref|ZP_02044976.1| hypothetical protein ACTODO_01859 [Actinomyces odontolyticus ATCC
17982]
gi|153798968|gb|EDN81388.1| hypothetical protein ACTODO_01859 [Actinomyces odontolyticus ATCC
17982]
Length = 216
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 95/182 (52%), Positives = 126/182 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLLKERI+++ G++ D A +ICAQLL L AE+P ++I LYINSPGG VTAGMAIYD
Sbjct: 34 VYQRLLKERIIWLGGEVRDENANVICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAIYD 93
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG G R+ P+ R+LLHQP GG G A++I +
Sbjct: 94 TMQYIKPDVVTVGMGMAASMGQFLLTAGAPGKRYITPHTRVLLHQPLGGAGGSATEIRIN 153
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+ +K+ L I GKT E+VE DRDH +A EA ++G VD+V+ S +I +
Sbjct: 154 ADLILGMKKELAAITASRTGKTVEQVEADGDRDHWFTAQEALEYGFVDRVIDSPQEIGTR 213
Query: 215 SK 216
+
Sbjct: 214 GE 215
>gi|313207344|ref|YP_004046521.1| endopeptidase clp [Riemerella anatipestifer DSM 15868]
gi|312446660|gb|ADQ83015.1| Endopeptidase Clp [Riemerella anatipestifer DSM 15868]
gi|315023239|gb|EFT36249.1| ATP-dependent Clp protease proteolytic subunit [Riemerella
anatipestifer RA-YM]
gi|325335197|gb|ADZ11471.1| Protease subunit of ATP-dependent Clp proteases [Riemerella
anatipestifer RA-GD]
Length = 224
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 92/192 (47%), Positives = 142/192 (73%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ +P K+I
Sbjct: 33 NLTPYIMEERRMNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVTAQLLFLESADPTKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ IKP ++T C G AASMG++LL AGEKG R AL ++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQIIKPDVATICTGMAASMGAVLLVAGEKGKRSALKHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASD+E + ++++K+K+ L +I ++ G++YE VEK+ DRD+ M++ EA
Sbjct: 153 IHQPSGGAQGVASDMEINLREMLKLKKELYDIISEHSGQSYEWVEKSSDRDYWMTSEEAK 212
Query: 197 DWGVVDKVLMSR 208
++G++D+VL +
Sbjct: 213 EFGMIDEVLARK 224
>gi|296453941|ref|YP_003661084.1| endopeptidase Clp [Bifidobacterium longum subsp. longum JDM301]
gi|296183372|gb|ADH00254.1| Endopeptidase Clp [Bifidobacterium longum subsp. longum JDM301]
Length = 233
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E K+ G+ E++ + ++ D ++A EA
Sbjct: 161 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLAKHTGQDVEKIRRDIEVDTFLTAPEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRQ 233
>gi|293189652|ref|ZP_06608369.1| Clp protease [Actinomyces odontolyticus F0309]
gi|292821390|gb|EFF80332.1| Clp protease [Actinomyces odontolyticus F0309]
Length = 216
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 95/182 (52%), Positives = 126/182 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLLKERI+++ G++ D A +ICAQLL L AE+P ++I LYINSPGG VTAGMAIYD
Sbjct: 34 VYQRLLKERIIWLGGEVRDDNANVICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAIYD 93
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG G R+ P+ R+LLHQP GG G A++I +
Sbjct: 94 TMQYIKPDVVTVGMGMAASMGQFLLTAGAPGKRYITPHTRVLLHQPLGGAGGSATEIRIN 153
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+ +K+ L I GKT E+VE DRDH +A EA ++G VD+V+ S +I +
Sbjct: 154 ADLILGMKKELASITAARTGKTVEQVEADGDRDHWFTAQEALEYGFVDRVIDSPQEIGTR 213
Query: 215 SK 216
+
Sbjct: 214 GE 215
>gi|299471219|emb|CBN79074.1| chloroplast clp protease P [Ectocarpus siliculosus]
Length = 292
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 127/181 (70%)
Query: 29 GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
G D+ SRLLK+RI+ + Q+ D +A ++ AQLL+L ++P K+I+LYINSPGG V+A
Sbjct: 97 GGSQMDVISRLLKDRILLLGQQVNDEVANVLVAQLLYLANDDPDKDITLYINSPGGSVSA 156
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
GMAIYD MQ++ +ST C G AASMG+ LL AG KG R +LPNARI++HQP GG GQA
Sbjct: 157 GMAIYDAMQYVPCDVSTVCFGTAASMGAFLLGAGAKGKRRSLPNARIMIHQPLGGAQGQA 216
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+DIE A++I+ I+ LN + C + ++++ DRD M+ EA D+G++D+V+ ++
Sbjct: 217 ADIEIQAKEILFIRSLLNSYMAEYCDQPADKIQDDCDRDFFMTPEEAMDYGLIDEVVTTK 276
Query: 209 I 209
Sbjct: 277 T 277
>gi|297843050|ref|XP_002889406.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
gi|297335248|gb|EFH65665.1| hypothetical protein ARALYDRAFT_887394 [Arabidopsis lyrata subsp.
lyrata]
Length = 298
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 128/186 (68%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R I S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 106 PMVQE------RFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYV 159
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 160 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 219
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G +DI+ A +++ K LN + G++ E++ + DRD MSA EA ++G
Sbjct: 220 PLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYG 279
Query: 200 VVDKVL 205
++D V+
Sbjct: 280 LIDGVI 285
>gi|18378982|ref|NP_563657.1| CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase
[Arabidopsis thaliana]
gi|75313059|sp|Q9S834|CLPP5_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 5,
chloroplastic; AltName: Full=Endopeptidase ClpP5;
Short=nClpP5; AltName: Full=nClpP1; Flags: Precursor
gi|9972387|gb|AAG10637.1|AC022521_15 ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|4887543|emb|CAB43488.1| ATP-dependent Clp protease subunit ClpP [Arabidopsis thaliana]
gi|5360579|dbj|BAA82065.1| nClpP1 [Arabidopsis thaliana]
gi|21536639|gb|AAM60971.1| ATP-dependent Clp protease proteolytic subunit ClpP5 [Arabidopsis
thaliana]
gi|89274139|gb|ABD65590.1| At1g02560 [Arabidopsis thaliana]
gi|332189323|gb|AEE27444.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 298
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 89/186 (47%), Positives = 128/186 (68%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R I S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 106 PMVQE------RFQSIISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYV 159
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 160 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 219
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G +DI+ A +++ K LN + G++ E++ + DRD MSA EA ++G
Sbjct: 220 PLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDFFMSAKEAKEYG 279
Query: 200 VVDKVL 205
++D V+
Sbjct: 280 LIDGVI 285
>gi|159465361|ref|XP_001690891.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158279577|gb|EDP05337.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 256
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 84/196 (42%), Positives = 135/196 (68%), Gaps = 6/196 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+E R + S+L ++RIV + G ++D MA L+ AQLL+L++ + +++I++Y+
Sbjct: 62 PLVIE------RFQGVVSQLFQQRIVRLGGAVDDDMANLLVAQLLYLDSVDNKRDITMYV 115
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ +L++G+ G R++LPN+RI++HQ
Sbjct: 116 NSPGGSVTAGMAVFDTMRHIRPDVSTCCIGLAASMGAFILASGQAGKRYSLPNSRIMIHQ 175
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A +I+ K LN + G++ E + K DRD MS EA ++G
Sbjct: 176 PLGGAQGQATDIEIQANEILHHKLTLNGYLAQFTGQSMETITKDTDRDFFMSPQEAIEYG 235
Query: 200 VVDKVLMSRIDIEEKS 215
+VD ++ ++ +
Sbjct: 236 LVDAIISKPQMLQSRE 251
>gi|308800514|ref|XP_003075038.1| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus
tauri]
gi|119358863|emb|CAL52310.2| ClpP1 Clp protease proteolytic subunit ClpP (IC) [Ostreococcus
tauri]
Length = 252
Score = 194 bits (494), Expect = 6e-48, Method: Composition-based stats.
Identities = 93/197 (47%), Positives = 133/197 (67%), Gaps = 6/197 (3%)
Query: 21 MVVEQTNRG------ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
VV+Q +G ER + S+L+ +RIV + G ++D LI AQLL+L+A +P K+
Sbjct: 42 YVVDQQGKGPSPIVVERFQSVASQLMSQRIVRLGGAVDDDGCNLIVAQLLWLDAADPDKD 101
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ LL++GE G R++LPN+R
Sbjct: 102 ITLYINSPGGSVTAGMAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGEAGKRYSLPNSR 161
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG GQA+DIE A +I+ K LN + K + V + DRD MSA E
Sbjct: 162 IMIHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTKKPLQTVMEDTDRDFFMSAQE 221
Query: 195 ACDWGVVDKVLMSRIDI 211
A ++G++D ++ DI
Sbjct: 222 ALEYGLIDSIIEHPADI 238
>gi|325000575|ref|ZP_08121687.1| endopeptidase Clp [Pseudonocardia sp. P1]
Length = 230
Score = 194 bits (493), Expect = 6e-48, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L +ERI+F+ QI D A AQLL LE+ +P +EISL
Sbjct: 31 VLPSYVERTSYGVKESNPYNKLFEERIIFLGEQINDTSANDTMAQLLVLESLDPDREISL 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ MAIYDTMQFI+P I T C+GQAAS ++LL AG G R A+ NARIL+
Sbjct: 91 YINSPGGSFTSLMAIYDTMQFIRPDIQTVCLGQAASAAAVLLCAGTPGRRMAVENARILI 150
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQASD+E A +I +I++R+ E+ ++ +T E+V +DRD I++A EA
Sbjct: 151 HQPATEGVYGQASDLEIQATEISRIRKRMEEVIARHSNRTAEQVRDDIDRDKILTAEEAK 210
Query: 197 DWGVVDKVLMSRI 209
++G+VD+++ SR
Sbjct: 211 EYGLVDEIVQSRK 223
>gi|225012269|ref|ZP_03702706.1| Endopeptidase Clp [Flavobacteria bacterium MS024-2A]
gi|225003824|gb|EEG41797.1| Endopeptidase Clp [Flavobacteria bacterium MS024-2A]
Length = 221
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 92/204 (45%), Positives = 138/204 (67%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G +++ + P ++E+ D++SRL+ +RI+F+ I+D++A +I AQL
Sbjct: 15 HGINSMYYDNIVSSMTPYIIEERQMNVAQMDVFSRLMMDRIMFLGTGIDDNVANIIQAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFL++ + ++I +YINSPGG V AG+ IYDTMQFI P ++T C G AASMG++LL AG
Sbjct: 75 LFLQSTDANRDIQMYINSPGGSVYAGLGIYDTMQFISPNVATICTGIAASMGAVLLCAGH 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
+G R ALP+AR+++HQP GG GQASDIE ++I+K+K L +I K+ G+ E+V
Sbjct: 135 EGKRSALPHARVMIHQPLGGAQGQASDIEITTREILKLKDELYQIISKHSGQKMEKVTHD 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMS 207
DRD+ M A EA +G+VD+VL +
Sbjct: 195 SDRDYWMKAEEAKAYGMVDEVLQN 218
>gi|311746206|ref|ZP_07719991.1| Clp protease [Algoriphagus sp. PR1]
gi|126576434|gb|EAZ80712.1| Clp protease [Algoriphagus sp. PR1]
Length = 223
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 92/205 (44%), Positives = 142/205 (69%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G A + V+E+ + R D++SRL+ +RI+F+ I+DH+A +I AQLL
Sbjct: 19 GTAFDQYTQHIENMTRSVIEERPQNFREIDVFSRLIMDRIIFLGTGIDDHIANIIVAQLL 78
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FLE+ + +K++ LY+NSPGG VTAG+ IYDTMQ+I P ++T C G AASMG++LL+ G K
Sbjct: 79 FLESVDAKKDVLLYVNSPGGSVTAGLGIYDTMQYIGPDVATICTGIAASMGAVLLAGGAK 138
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R AL ++R+++HQPSGG GQ+SD+E + I+ +++ L +I + GKTYEE+E+
Sbjct: 139 DKRSALKHSRVMIHQPSGGMQGQSSDMEISLKLILSMRQELYQILANHTGKTYEEIERDS 198
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD+ + A EA D+G++D+VL+ +
Sbjct: 199 DRDYWLKAPEAKDYGLIDEVLVKKS 223
>gi|189502525|ref|YP_001958242.1| hypothetical protein Aasi_1180 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497966|gb|ACE06513.1| hypothetical protein Aasi_1180 [Candidatus Amoebophilus asiaticus
5a2]
Length = 224
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 135/194 (69%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ V+E+ R D++SRL+ +RI+F+ ++DH++ +I AQLLFLE+ +P+K++
Sbjct: 31 NMTRSVIEERPTHFREIDVFSRLIMDRIIFLGMPVDDHISNIIVAQLLFLESTDPKKDVR 90
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V G+ IYDTMQ+I P + T C G AASM ++LL+ G R+ALP++RIL
Sbjct: 91 LYINSPGGSVYPGLGIYDTMQYIAPDVHTICTGLAASMAAVLLAGGAHKKRYALPHSRIL 150
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASD+E + +++IKR L +I K+ GK+ ++EK DRD+ M ASEA
Sbjct: 151 IHQPLGGAQGQASDMEITVKQMLEIKRDLYQILAKHTGKSQGKLEKDGDRDYWMRASEAK 210
Query: 197 DWGVVDKVLMSRID 210
++G++D+VL
Sbjct: 211 EYGIIDEVLEKNNQ 224
>gi|325286841|ref|YP_004262631.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica
DSM 7489]
gi|324322295|gb|ADY29760.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica
DSM 7489]
Length = 226
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 134/194 (69%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 32 SNMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADASKDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AGEKG R L ++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGEKGKRSGLTHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+K+K L I + G+T+++V DRD+ M A EA
Sbjct: 152 MIHQPLGGAQGQASDIEITAREILKLKDELYNIIATHSGQTFDKVSNDSDRDYWMKADEA 211
Query: 196 CDWGVVDKVLMSRI 209
+G++D++L+
Sbjct: 212 KKYGMIDEILVREK 225
>gi|261337232|ref|ZP_05965116.1| Clp protease [Bifidobacterium gallicum DSM 20093]
gi|270277586|gb|EFA23440.1| Clp protease [Bifidobacterium gallicum DSM 20093]
Length = 234
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 83/201 (41%), Positives = 135/201 (67%), Gaps = 3/201 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
++ + ++P E+T G + D Y+RL ++RI+++ Q++D A I AQLL LE+
Sbjct: 36 SPQNRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIWMGVQVDDTSADDIMAQLLVLESL 93
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R
Sbjct: 94 DPSRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLI 153
Query: 130 LPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LPNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E + K ++ D
Sbjct: 154 LPNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGQPIERIRKDIEVDT 213
Query: 189 IMSASEACDWGVVDKVLMSRI 209
++A EA ++G+VD+VL R
Sbjct: 214 FLTAQEAKEYGIVDEVLEHRA 234
>gi|63079329|gb|AAY29672.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium breve UCC2003]
Length = 227
Score = 194 bits (493), Expect = 7e-48, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 35 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 94
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 95 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 154
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L E + G+ E++ + ++ D ++A EA
Sbjct: 155 HQPAIDQGFGKATEIEIQAKEMLRMREWLEETLANHTGQDVEKIRRDIEVDTFLTADEAK 214
Query: 197 DWGVVDKVLMSRI 209
D+G+VD+VL R
Sbjct: 215 DYGIVDEVLAHRQ 227
>gi|326330783|ref|ZP_08197084.1| Clp protease [Nocardioidaceae bacterium Broad-1]
gi|325951313|gb|EGD43352.1| Clp protease [Nocardioidaceae bacterium Broad-1]
Length = 222
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 93/180 (51%), Positives = 127/180 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLL+ERIVF+ ++ D A ICAQLL L AE+P+ +I L+INSPGG V AGMAIYD
Sbjct: 35 IYNRLLRERIVFLGSEVRDQNANAICAQLLLLSAEDPEADIFLHINSPGGSVDAGMAIYD 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM +I ++T MG AASMG LL AG KG R+ALP+ARI++HQPS G G ASDI+
Sbjct: 95 TMNYIPNDVATVGMGLAASMGQFLLCAGAKGKRYALPHARIMMHQPSSGMGGSASDIKIQ 154
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
AQ + IK+ L E+ ++ G++ E+V DRD +A+EA D+G+VD+V+ S + ++
Sbjct: 155 AQQSLHIKKVLLELISEHTGQSVEQVTVDADRDRWFTAAEALDYGLVDQVIKSAKEASDE 214
>gi|320010821|gb|ADW05671.1| Endopeptidase Clp [Streptomyces flavogriseus ATCC 33331]
Length = 222
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 23 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 83 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 142
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L E+ K+ E++ + ++RD I++A +A
Sbjct: 143 HQPSSQTGREQLSDLEIAANEILRMRTQLEEMLAKHSTTPLEKISEDIERDKILTADDAL 202
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G+VD+++ +R S
Sbjct: 203 AYGLVDQIVSTRKTTAGAS 221
>gi|256391235|ref|YP_003112799.1| endopeptidase Clp [Catenulispora acidiphila DSM 44928]
gi|256357461|gb|ACU70958.1| Endopeptidase Clp [Catenulispora acidiphila DSM 44928]
Length = 201
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 125/197 (63%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+P V Q GER DIYS LL ERI+++ I+ +A + AQLL LE++ P
Sbjct: 5 ATMNYTIPYVTTQRPGGERVTDIYSHLLTERIIYLGTAIDAGVANALIAQLLHLESDGPD 64
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+EISLY+N GG +T+ +AIYDTMQ IK PI T C+GQA ++G++LL+AG G+R LP+
Sbjct: 65 REISLYVNCEGGDLTSMLAIYDTMQHIKAPIRTTCVGQAIAVGAVLLAAGTPGLRSVLPH 124
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR++LHQP+ G D+ A ++V+++ L I ++ G+T E + DRD + +A
Sbjct: 125 ARVVLHQPAARGQGAIPDLIIQADELVRMRSELEAILTQHTGQTAERLRHDTDRDRVFTA 184
Query: 193 SEACDWGVVDKVLMSRI 209
+ A ++G+ D+VL R
Sbjct: 185 AAAVEYGLADQVLGPRE 201
>gi|189485256|ref|YP_001956197.1| ATP-dependent Clp protease protease subunit P [uncultured Termite
group 1 bacterium phylotype Rs-D17]
gi|170287215|dbj|BAG13736.1| ATP-dependent Clp protease protease subunit P [uncultured Termite
group 1 bacterium phylotype Rs-D17]
Length = 203
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 99/197 (50%), Positives = 146/197 (74%), Gaps = 7/197 (3%)
Query: 18 LVPMVVEQTNRGER-SYDIYSRLLKERIVFVTGQ---IEDHMATLICAQLLFLEAENPQK 73
L+P V+E+ N+G +YD+YSRLLK+RI+FV GQ + A ++ AQLL+L++E+ K
Sbjct: 4 LIPTVIERWNQGAAVTYDLYSRLLKDRIIFVGGQDGAVTTDSANVLIAQLLYLDSEDQGK 63
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+ISLYINSPGG+V+AG+A+YDTMQFIK PI+T CMG A S G++LL+AG KG R+AL ++
Sbjct: 64 DISLYINSPGGMVSAGLAVYDTMQFIKSPITTICMGMAMSFGAVLLAAGTKGKRYALTHS 123
Query: 134 RILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
RI++HQP SG SDI+ A+++V K++L+ I ++ GKT E V K DR+ M
Sbjct: 124 RIMIHQPLIYGGGLSGTVSDIDIEAKELVSTKQKLSGIIAEHTGKTSERVLKDTDRNCYM 183
Query: 191 SASEACDWGVVDKVLMS 207
SA EA ++G++D+V+++
Sbjct: 184 SAQEAKEYGLIDEVIVN 200
>gi|145342132|ref|XP_001416147.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576372|gb|ABO94440.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 128/186 (68%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + S+L+ +RI+ + G ++D LI AQLL+L+A +P K+I+LY+NSPGG VTAG
Sbjct: 56 ERFQSVASQLMSQRIIRLGGAVDDDSCNLIVAQLLWLDAADPTKDITLYVNSPGGSVTAG 115
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MA++DTM+ I+P +ST C+G AASMG+ LL++G G R++LPN+RI++HQP GG GQA+
Sbjct: 116 MAVFDTMRHIRPNVSTVCVGLAASMGAFLLASGHPGKRYSLPNSRIMIHQPLGGAQGQAA 175
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE A +I+ K LN + K E V + DRD MSA EA ++G++D ++
Sbjct: 176 DIEIQANEIMHHKSTLNGYLAEFTKKPLETVMEDTDRDFFMSAKEAVEYGLIDAIIEHPT 235
Query: 210 DIEEKS 215
D+ K+
Sbjct: 236 DVAVKA 241
>gi|38234363|ref|NP_940130.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|67460484|sp|Q6NFU4|CLPP2_CORDI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|38200626|emb|CAE50322.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
diphtheriae]
Length = 199
Score = 194 bits (493), Expect = 8e-48, Method: Composition-based stats.
Identities = 92/186 (49%), Positives = 131/186 (70%), Gaps = 1/186 (0%)
Query: 23 VEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
+ Q + G D +Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINS
Sbjct: 7 MAQASAGMNLSDSVYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINS 66
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG VTAGMAIYDTM++ I+T+ MG AASMG LLS G KG RFALP+ARI++HQPS
Sbjct: 67 PGGSVTAGMAIYDTMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPS 126
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G G A+DI A+ + KR + E+ ++ G+++E++ K DRD +A +A ++G+V
Sbjct: 127 AGVGGTAADIAIQAEQFAQTKREMAELIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIV 186
Query: 202 DKVLMS 207
D V+ S
Sbjct: 187 DHVIES 192
>gi|261880040|ref|ZP_06006467.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
bergensis DSM 17361]
gi|270333280|gb|EFA44066.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
bergensis DSM 17361]
Length = 232
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 139/199 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +++D+ A + AQLL+L++ + +K+IS+
Sbjct: 31 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEVDDYTANTLQAQLLYLDSVDNEKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASMG++LL +G +G R ALP+AR+++
Sbjct: 91 YINSPGGSVTAGLGIYDTMQFISSSVATICTGMAASMGAVLLVSGAEGKRAALPHARVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K+ L I + ++YE+V K DR++ M+A EA
Sbjct: 151 HQPLGGVQGQASDIEIEAREILKFKKELYTIIANHSHQSYEKVWKDSDRNYWMNAEEAKA 210
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++D VL + + E K
Sbjct: 211 YGMIDMVLTRKNNETENGK 229
>gi|313239506|emb|CBY14435.1| unnamed protein product [Oikopleura dioica]
Length = 249
Score = 194 bits (492), Expect = 8e-48, Method: Composition-based stats.
Identities = 106/212 (50%), Positives = 145/212 (68%), Gaps = 8/212 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQ------IEDH 54
+ F G + + VP+V+EQ GER+YDIYSRLLK+RI+ V G + D
Sbjct: 22 LRFSGPRSRTATQERAFGVPLVIEQEMGGERTYDIYSRLLKDRIICVFGIFHPRKKVHDQ 81
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
+A + AQLLFL ++ P + I +YINSPGGVVT+GMAIYD MQ I P+ T+C+G AASM
Sbjct: 82 LAAAVVAQLLFLASDKPDQPIKMYINSPGGVVTSGMAIYDCMQLISCPVETWCLGNAASM 141
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC- 173
GSLLL+AG G R+ALPNA+I++HQP GG GQA+DI A++I + K+ L + YV +
Sbjct: 142 GSLLLTAGSPGCRYALPNAQIMIHQPLGGAQGQATDILIAAKNIDRTKKTLTQTYVTHNA 201
Query: 174 -GKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
KTYEE ++RD+ M+A EA D+G++DK+
Sbjct: 202 KNKTYEEFFNAMERDNYMTAQEALDFGIIDKI 233
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 90/195 (46%), Positives = 129/195 (66%), Gaps = 3/195 (1%)
Query: 16 LGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G DIY+RL +ERI+F+ +I+D +A I +L+L+ E+
Sbjct: 1 MPIGVPKVAYRVPGSSGGEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG V +G+AI+D MQ IK + T +G AASM S +LSAG KG R ALP+
Sbjct: 61 KPIYLYINSPGGSVISGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLALPS 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQA DI+ A I++I+ L ++Y G+T E++ K LDRD+ MSA
Sbjct: 121 SRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFTGQTTEQITKDLDRDNFMSA 180
Query: 193 SEACDWGVVDKVLMS 207
EA ++G++D+VL
Sbjct: 181 QEALEYGLIDRVLER 195
>gi|255325480|ref|ZP_05366582.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311741272|ref|ZP_07715096.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255297418|gb|EET76733.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311303442|gb|EFQ79521.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 199
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 91/173 (52%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 20 VYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 80 TMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + KR + E+ ++ G+T+E++ K DRD M+A +A D+G+VD V+ S
Sbjct: 140 AEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWMTAQQAKDYGIVDHVIES 192
>gi|317124503|ref|YP_004098615.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Intrasporangium calvum DSM 43043]
gi|315588591|gb|ADU47888.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Intrasporangium calvum DSM 43043]
Length = 214
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 126/179 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+F+ + D A ICAQLL L AE+P+K+I LYINSPGG ++AGMAI+D
Sbjct: 20 IYNRLLKERIIFLGSDVRDDNANAICAQLLLLSAEDPEKDIWLYINSPGGSISAGMAIFD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM +I ++T MG AASMG LLSAG G R+A P+AR+++HQPSGG G A+DI+
Sbjct: 80 TMNWIPNDVATVAMGMAASMGQFLLSAGTHGKRYATPHARVMMHQPSGGIGGTATDIKIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ +K+++ E+ ++ G+T E++EK DRD SA EA ++G VD V S E
Sbjct: 140 AEQMLYVKKQMAELIAEHTGQTIEQIEKDSDRDRWFSAQEAKEYGFVDHVFSSSGQAIE 198
>gi|284030228|ref|YP_003380159.1| endopeptidase Clp [Kribbella flavida DSM 17836]
gi|283809521|gb|ADB31360.1| Endopeptidase Clp [Kribbella flavida DSM 17836]
Length = 207
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 92/181 (50%), Positives = 121/181 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLL RI+F+ ++ D A ICAQ+L L AE+P K+I LYINSPGG V AGMAIYD
Sbjct: 24 IYQRLLSSRIIFLGSEVRDDNANAICAQMLLLNAEDPNKDIWLYINSPGGSVDAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I ++T MG AASMG LL AG K RFALP+ARI++HQPSGG G ASDI+
Sbjct: 84 TMQYISNDVATVGMGLAASMGQFLLCAGAKNKRFALPHARIMMHQPSGGMGGTASDIKIQ 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
AQ + IK +L ++ ++ G+ E+VE DRD +A +A ++G +D V+ S +
Sbjct: 144 AQQSLHIKAQLFKLIAEHTGQALEQVENDADRDRWFTADQAKEYGFIDHVVASAAQLSSG 203
Query: 215 S 215
S
Sbjct: 204 S 204
>gi|171743308|ref|ZP_02919115.1| hypothetical protein BIFDEN_02439 [Bifidobacterium dentium ATCC
27678]
gi|171278922|gb|EDT46583.1| hypothetical protein BIFDEN_02439 [Bifidobacterium dentium ATCC
27678]
Length = 235
Score = 194 bits (492), Expect = 9e-48, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 38 PQDRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 95
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 96 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 155
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L + K+ G+ E++ K ++ D
Sbjct: 156 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLEDTLAKHTGQDVEKIRKDIEVDTF 215
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A+EA +G+VD+VL R
Sbjct: 216 LTAAEAKAYGIVDEVLEHRS 235
>gi|145596011|ref|YP_001160308.1| endopeptidase Clp [Salinispora tropica CNB-440]
gi|145305348|gb|ABP55930.1| Endopeptidase Clp [Salinispora tropica CNB-440]
Length = 213
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+F+ ++ D +A ICAQLL L AE+P ++I+L+INSPGG V +GMAIYD
Sbjct: 29 VYNRLLKERIIFLGSEVTDQVANRICAQLLLLAAEDPDRDINLWINSPGGSVYSGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI +ST MG AASMG LLL AG KG R+ALP+ARI++HQPSGG G ASDI
Sbjct: 89 TMQFIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARIMMHQPSGGMGGTASDIAIQ 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR E + G++ ++E DRD +A EA ++G +DKV+ + E
Sbjct: 149 AEQMLYTKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMEYGFIDKVITGAAQVPE 207
>gi|156037438|ref|XP_001586446.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980]
gi|154697841|gb|EDN97579.1| hypothetical protein SS1G_12432 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 198
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 100/192 (52%), Positives = 146/192 (76%), Gaps = 2/192 (1%)
Query: 26 TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
G R+ DI+S+LL+ERI+ + G+++ ++ + AQLL+LE++ P+K I+LYINSPGG
Sbjct: 5 RGGGWRTSDIFSKLLQERIICLNGEVDSSLSAAVVAQLLYLESDAPEKAITLYINSPGGS 64
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
VTAG+AIYDTM +IK P+ST C+GQAASMGSLLL GE G RF LP++ I++HQPSGG+S
Sbjct: 65 VTAGLAIYDTMTYIKSPVSTVCVGQAASMGSLLLCGGEPGKRFCLPHSSIMIHQPSGGYS 124
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDK 203
GQA+DI HA +I+++++ LNEIY ++ K + EE+E+ ++RD +SA EA D G+VD+
Sbjct: 125 GQATDIAIHATEILRVRKSLNEIYKRHLTKEHSLEEIERMMERDKFLSAQEALDMGIVDE 184
Query: 204 VLMSRIDIEEKS 215
+L R + +K
Sbjct: 185 ILDRRESVGKKE 196
>gi|86739912|ref|YP_480312.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Frankia sp.
CcI3]
gi|108935915|sp|Q2JDQ9|CLPP1_FRASC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86566774|gb|ABD10583.1| ATP-dependent Clp protease proteolytic subunit ClpP [Frankia sp.
CcI3]
Length = 213
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 127/190 (66%), Gaps = 2/190 (1%)
Query: 27 NRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+G ++D +++RLL RIVF+ +ED +A ICAQLL L AE+P ++I LYINSPGG
Sbjct: 20 GQGGPAFDDQVFNRLLANRIVFLGSVVEDSIANAICAQLLLLNAEDPTRDIFLYINSPGG 79
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMAIYDTMQF++ ++T +G AASMG LL AG G R++LP+ARI++HQPSGG
Sbjct: 80 SVSAGMAIYDTMQFVENDVATVSLGLAASMGQFLLCAGASGKRYSLPHARIMMHQPSGGI 139
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G ASDI A+ ++ KR + E + G+ E++E+ DRD +A EA D+G VD V
Sbjct: 140 GGTASDIAIQAEQMLYTKRMMQERIAFHTGQPIEQIERDSDRDRWFTAEEAKDYGFVDHV 199
Query: 205 LMSRIDIEEK 214
+ + +
Sbjct: 200 VQQARQVPSE 209
>gi|223994545|ref|XP_002286956.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220978271|gb|EED96597.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 260
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/193 (47%), Positives = 131/193 (67%), Gaps = 4/193 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+P V G D+ SRLLK+RI+ + + D +A ++ AQLL+L E+P+K+I+
Sbjct: 59 PTLPTV----EGGSGQLDVISRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPEKDIT 114
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V+AG+AIYDTMQFI + T C G AASMG+ LL AG G R +LPNARI+
Sbjct: 115 LYINSPGGSVSAGLAIYDTMQFIPCDVQTVCFGMAASMGAFLLGAGAPGKRKSLPNARIM 174
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA+DIE A++I+ +K LN+ + C + E++E+ DRD M+ EA
Sbjct: 175 IHQPLGGAQGQAADIEIQAKEILFVKACLNKYIAEYCDQPVEKIEEDTDRDFFMTPYEAQ 234
Query: 197 DWGVVDKVLMSRI 209
D+G++D+V+ ++
Sbjct: 235 DYGIIDEVIKTKT 247
>gi|306823253|ref|ZP_07456629.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
dentium ATCC 27679]
gi|304553885|gb|EFM41796.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
dentium ATCC 27679]
Length = 235
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 138/200 (69%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 38 PQDRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 95
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 96 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 155
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L + K+ G+ E++ K ++ D
Sbjct: 156 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLEDTLAKHTGQDVEKIRKDIEVDTF 215
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A+EA +G+VD+VL R
Sbjct: 216 LTAAEAKAYGIVDEVLEHRS 235
>gi|305665189|ref|YP_003861476.1| ATP-dependent Clp protease proteolytic subunit 2 [Maribacter sp.
HTCC2170]
gi|88709941|gb|EAR02173.1| ATP-dependent Clp protease proteolytic subunit 2 [Maribacter sp.
HTCC2170]
Length = 226
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/215 (42%), Positives = 142/215 (66%), Gaps = 5/215 (2%)
Query: 1 MSFEGCAKKDSEDVFL-----GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHM 55
++ +G + + + P ++E+ + D++SRL+ +RI+F+ I D +
Sbjct: 12 INHQGINSMYYDKIMSSMYPTNMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGINDQV 71
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A ++ AQLLFLE+ + K+I +YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG
Sbjct: 72 ANIVQAQLLFLESADASKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMG 131
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
++LL AGEKG R L ++R+++HQP GG GQASDIE A++I+K+K L +I K+ G+
Sbjct: 132 AVLLCAGEKGKRSGLTHSRVMIHQPMGGAQGQASDIEITAREILKLKEELYQIISKHSGQ 191
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
++V + DRD+ M A EA +G++D++L+ D
Sbjct: 192 KLDKVHEDSDRDYWMKADEAKKYGMIDEILVRDKD 226
>gi|239941127|ref|ZP_04693064.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
roseosporus NRRL 15998]
gi|239987605|ref|ZP_04708269.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
roseosporus NRRL 11379]
gi|291444568|ref|ZP_06583958.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
roseosporus NRRL 15998]
gi|291347515|gb|EFE74419.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
roseosporus NRRL 15998]
Length = 227
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 28 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 88 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 147
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L E+ ++ E++ + ++RD I++A +A
Sbjct: 148 HQPSSQTGREQLSDLEIAANEILRMRTQLEEMLARHSTTPLEKISEDIERDKILTAEDAL 207
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G+VD+++ +R S
Sbjct: 208 AYGLVDQIVSTRKTTAGAS 226
>gi|171692433|ref|XP_001911141.1| hypothetical protein [Podospora anserina S mat+]
gi|170946165|emb|CAP72966.1| unnamed protein product [Podospora anserina S mat+]
Length = 254
Score = 194 bits (492), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 142/201 (70%), Gaps = 7/201 (3%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P + E T G R+ DI+S+LL+ERIV + G I+D ++ I AQLL+LE++NP K I++Y
Sbjct: 41 MPYITEVTAGGWRTSDIFSKLLQERIVCLNGAIDDTVSASIVAQLLWLESDNPDKPITMY 100
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V++G+AIYDTM +IK P+ST C+G AASM ++LL GE G R+ALP++ I++H
Sbjct: 101 INSPGGEVSSGLAIYDTMTYIKSPVSTVCVGGAASMAAILLIGGEPGKRYALPHSSIMVH 160
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT--YEE-----VEKTLDRDHIMS 191
QP GG GQASDI +A I +++ ++N+I + K+ +E+ + ++RD ++
Sbjct: 161 QPLGGTRGQASDILIYANQIQRLRDQINKIVQSHINKSFGFEKYDMQAINDMMERDKYLT 220
Query: 192 ASEACDWGVVDKVLMSRIDIE 212
A EA D+G++D++L R+ +
Sbjct: 221 AEEAKDFGIIDEILHRRVKND 241
>gi|227497466|ref|ZP_03927695.1| endopeptidase Clp [Actinomyces urogenitalis DSM 15434]
gi|226833040|gb|EEH65423.1| endopeptidase Clp [Actinomyces urogenitalis DSM 15434]
Length = 205
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/200 (50%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 18 LVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ PM + G D IY+RLLKERI+++ ++ D A ICAQ+L L AE+P+++I
Sbjct: 5 IAPMAADSHGGGLGLTDSIYNRLLKERIIWLGSEVRDDNANAICAQMLLLAAEDPERDIY 64
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ I+P + T G AASMG LLSAG KG R+ P+AR+L
Sbjct: 65 LYINSPGGSVTAGMAIYDTMQLIQPDVVTVATGMAASMGQHLLSAGAKGKRYITPHARVL 124
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+DI +A I+K+K L EI N G T EE+ DRDH SA EA
Sbjct: 125 MHQPSGGAGGSATDIRINADLIIKMKHELAEITADNTGHTVEEIIADSDRDHWFSAQEAL 184
Query: 197 DWGVVDKVLMSRIDIEEKSK 216
++G VD ++ S +I++ +
Sbjct: 185 EYGFVDHIISSSREIQQNGE 204
>gi|227504047|ref|ZP_03934096.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
gi|227199377|gb|EEI79425.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
Length = 199
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 87/173 (50%), Positives = 126/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 20 VYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 80 TMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + KR + ++ ++ G+++E++ K DRD +A +A ++G+VD V+ S
Sbjct: 140 AEQFAQTKREMAQLIAEHTGQSFEQITKDSDRDRWFTAQQAKEYGIVDHVIES 192
>gi|224068558|ref|XP_002302770.1| predicted protein [Populus trichocarpa]
gi|222844496|gb|EEE82043.1| predicted protein [Populus trichocarpa]
Length = 300
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/186 (48%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 104 PMVHE------RFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYV 157
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 158 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 217
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G SDI+ A +++ K LN + G++ E++ + DRD+ MSA EA D+G
Sbjct: 218 PLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSAKEAKDYG 277
Query: 200 VVDKVL 205
++D V+
Sbjct: 278 LIDGVI 283
>gi|227548721|ref|ZP_03978770.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079188|gb|EEI17151.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length = 190
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/172 (51%), Positives = 124/172 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 7 VYERLLRERIIFLGQQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 66
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 67 TMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 126
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ KR + E+ ++ G+T+E++ K DRD +A EA ++G+VD V+
Sbjct: 127 AEQFAATKREMAELIAEHTGQTFEQITKDSDRDRWFTAQEAKEYGIVDHVIS 178
>gi|326779366|ref|ZP_08238631.1| Endopeptidase Clp [Streptomyces cf. griseus XylebKG-1]
gi|326659699|gb|EGE44545.1| Endopeptidase Clp [Streptomyces cf. griseus XylebKG-1]
Length = 222
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 89/199 (44%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 23 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 83 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 142
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L ++ ++ E++ + ++RD I++A +A
Sbjct: 143 HQPSSQTGREQLSDLEIAANEILRMRTQLEQMLARHSTTPLEKISEDIERDKILTAEDAL 202
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G+VD+++ +R S
Sbjct: 203 AYGLVDQIVSTRKTTAGAS 221
>gi|326382826|ref|ZP_08204516.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
neofelifaecis NRRL B-59395]
gi|326198416|gb|EGD55600.1| ATP-dependent Clp protease proteolytic subunit [Gordonia
neofelifaecis NRRL B-59395]
Length = 238
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 87/173 (50%), Positives = 121/173 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P K+I+LYINSPGG VTAGMAI+D
Sbjct: 61 VFERLLRERIIFLGTQVDDDIANRLCAQILLLAAEDPTKDINLYINSPGGSVTAGMAIFD 120
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ ++T+ MG AASMG LL+AG KG R ALP+ARI++HQPS G G A+DI
Sbjct: 121 TMQLAPCDVATYAMGMAASMGQFLLAAGAKGKRHALPHARIMMHQPSAGIGGTAADIAIQ 180
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR +N + + G+ E++E DRD+ +A EA ++G VD V+ S
Sbjct: 181 AEQFAATKREMNRLNAEFTGQPLEKIEADADRDNWFTAEEAKEYGFVDHVVTS 233
>gi|229822178|ref|YP_002883704.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
gi|229568091|gb|ACQ81942.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
Length = 197
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 129/192 (67%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE+ ER+ D++SRLL +RIV++ I++ +A ++ AQL+ LE++NP I LY
Sbjct: 6 IPYVVEKRPGSERAMDVFSRLLSDRIVYLGTAIDEGVANVLIAQLIHLESDNPDLPIHLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG + A +++YD MQ+++PP++T C+GQAA+ +LLL+ G KG R L + R++LH
Sbjct: 66 INSPGGDIPATLSVYDAMQYVRPPVATTCLGQAATTAALLLAGGAKGQRSILSHGRVVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+G G D+ A +IV+++ +L E+ + G++ E + + DR+ I+ A A +
Sbjct: 126 QPTGQGRGTVPDLILAADEIVRVRSQLEEVLSAHTGQSVETLRRDTDRELILDAERAKAY 185
Query: 199 GVVDKVLMSRID 210
GVVD +L R D
Sbjct: 186 GVVDHILTERPD 197
>gi|88855133|ref|ZP_01129798.1| ATP-dependent Clp protease proteolytic subunit [marine
actinobacterium PHSC20C1]
gi|88815661|gb|EAR25518.1| ATP-dependent Clp protease proteolytic subunit [marine
actinobacterium PHSC20C1]
Length = 224
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/194 (46%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F+ QI+D A + AQLL LE+++P ++I +
Sbjct: 24 ILPTFEERTAYGYKRQDPYAKLFEDRIIFLGVQIDDASADDVMAQLLVLESQDPDRDIVM 83
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+I+P I T +GQAAS +++ + G KG R ALPNARI++
Sbjct: 84 YINSPGGSFTAMTAIYDTMQYIRPHIQTVVLGQAASAAAVITAGGTKGKRLALPNARIMI 143
Query: 138 HQPSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+GG QASDIE A++I++++ L E + +T E+V K ++RD I+SA+EA
Sbjct: 144 HQPAGGSEGSSQASDIEIQAREILRMRTWLEETLSHHSNRTAEQVNKDIERDKILSATEA 203
Query: 196 CDWGVVDKVLMSRI 209
++G++D+VL SR
Sbjct: 204 VEYGLIDQVLTSRK 217
>gi|295395011|ref|ZP_06805223.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972170|gb|EFG48033.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium
mcbrellneri ATCC 49030]
Length = 203
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 101/178 (56%), Positives = 130/178 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQL+ L AE+P+K+I LYINSPGG VTAGMAIYD
Sbjct: 21 IYNRLLKERIIWLGSEVRDSNANAICAQLMLLAAEDPEKDIWLYINSPGGSVTAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LLSAG KG RFA P+ARIL+HQP GG G A+DI+
Sbjct: 81 TMQYIKPDVGTVAMGMAASMGQFLLSAGAKGKRFATPHARILMHQPLGGIGGTATDIKIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ I+ +KR++ EI + GKT E++ K DRDH +A EA D+G +DKV+ D+
Sbjct: 141 AELILHMKRQMAEITAEQTGKTVEQILKDNDRDHWFTADEALDYGFIDKVVTHAADVP 198
>gi|238060619|ref|ZP_04605328.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
gi|237882430|gb|EEP71258.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
Length = 213
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 123/179 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+F+ ++ D +A ICAQLL L AE+P ++I L+INSPGG V +GMAIYD
Sbjct: 29 VYNRLLKERIIFLGSEVNDQVANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I +ST MG AASMG LLL AG KG R+ALP+ARI++HQPSGG G ASDI
Sbjct: 89 TMQYIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARIMMHQPSGGMGGTASDIAIQ 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR E + G+T ++E DRD +A EA D+G +DKV+ + E
Sbjct: 149 AEQMLYTKRMFQERVAFHTGQTQAQIEADSDRDRWFTAQEAMDYGFIDKVITGAAQVPE 207
>gi|108800543|ref|YP_640740.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
MCS]
gi|119869682|ref|YP_939634.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
KMS]
gi|126436159|ref|YP_001071850.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
JLS]
gi|108770962|gb|ABG09684.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. MCS]
gi|119695771|gb|ABL92844.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2
peptidase, Serine peptidase, MEROPS family S14
[Mycobacterium sp. KMS]
gi|126235959|gb|ABN99359.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. JLS]
Length = 215
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/211 (42%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS + + + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I
Sbjct: 1 MSNQTDPRLQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIM 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+
Sbjct: 59 AQLLVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLA 118
Query: 121 AGEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
AG G R ALPNARIL+HQP SG GQ SD+E A++I +++ + ++ GK E
Sbjct: 119 AGTPGKRLALPNARILIHQPALSGVIQGQFSDLEIQAKEIERMRTLMEVTLARHTGKDPE 178
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ K DRD I++A EA D+G++D VL R
Sbjct: 179 TIRKDTDRDKILTAEEAKDYGIIDTVLEYRK 209
>gi|282866710|ref|ZP_06275750.1| Endopeptidase Clp [Streptomyces sp. ACTE]
gi|282558409|gb|EFB63971.1| Endopeptidase Clp [Streptomyces sp. ACTE]
Length = 232
Score = 193 bits (491), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/199 (45%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 33 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 92
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 93 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 152
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L E+ K+ E++ + ++RD I++A +A
Sbjct: 153 HQPSSQTGREQLSDLEIAANEILRMRTQLEEMLAKHSTTPLEKISEDIERDKILTADDAL 212
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G+VD+++ +R S
Sbjct: 213 AYGLVDQIVSTRKTTAGAS 231
>gi|68535616|ref|YP_250321.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
jeikeium K411]
gi|109878151|sp|Q4JWV4|CLPP1_CORJK RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|68263215|emb|CAI36703.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
jeikeium K411]
Length = 188
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 124/176 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 12 VYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLSAG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 72 TMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ KR + E+ + G+T E++ K DRD +A +A ++G VD V+ S +
Sbjct: 132 AEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAQQAKEYGFVDHVITSAKE 187
>gi|76262827|gb|ABA41488.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 306
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 127/186 (68%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 105 PMVQE------RFQSVISQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYV 158
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 159 NSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 218
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G +DI+ A +++ K LN + G++ E + + DRD MSA EA ++G
Sbjct: 219 PLGGAQGGQTDIDIQANEMLHHKANLNSYLAYHTGQSLERINQDTDRDFFMSAKEAKEYG 278
Query: 200 VVDKVL 205
++D V+
Sbjct: 279 LIDGVI 284
>gi|86140705|ref|ZP_01059264.1| ATP-dependent Clp protease proteolytic subunit 2 [Leeuwenhoekiella
blandensis MED217]
gi|85832647|gb|EAQ51096.1| ATP-dependent Clp protease proteolytic subunit 2 [Leeuwenhoekiella
blandensis MED217]
Length = 237
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 136/192 (70%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+GL P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 45 VGLTPNIIEERQMNAVAMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADASKDI 104
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG KG R L ++R+
Sbjct: 105 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGAKGKRSGLTHSRV 164
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ +K L I K+ G+TY++V + DRD+ M A +A
Sbjct: 165 MIHQPMGGAQGQASDIEITAKEILTLKEELYNIIAKHSGQTYDKVYEDSDRDYWMKADKA 224
Query: 196 CDWGVVDKVLMS 207
++G++D++L
Sbjct: 225 LEYGMIDEILAR 236
>gi|297198068|ref|ZP_06915465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
gi|197714242|gb|EDY58276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
Length = 211
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/197 (42%), Positives = 132/197 (67%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G++S D YS+LL+ERIVF+ QI+D A + AQ ++LE ++P ++I+L
Sbjct: 9 VLPEFHERTSFGQKSMDPYSKLLEERIVFLGTQIDDTSANDLMAQFMYLEYQDPDRDIAL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +A AIYDTMQ++ + T C+GQA S ++LL+AG G R LP AR+++
Sbjct: 69 YINSPGGSFSAMSAIYDTMQYVSCDVETTCLGQAGSSAAVLLAAGTPGKRSVLPGARVVI 128
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP S GQASD+ A ++++++ RL E+ V++ G++ E+V ++RD I+ A A
Sbjct: 129 HQPALSEPVQGQASDLAIQADELLRVRARLEEMLVRHTGRSPEQVSADIERDRILDAQGA 188
Query: 196 CDWGVVDKVLMSRIDIE 212
D G+ D ++ SR
Sbjct: 189 LDHGLADAIVPSRKSSP 205
>gi|227497467|ref|ZP_03927696.1| endopeptidase Clp [Actinomyces urogenitalis DSM 15434]
gi|226833041|gb|EEH65424.1| endopeptidase Clp [Actinomyces urogenitalis DSM 15434]
Length = 221
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D YS+L ++RIVF+ Q++D A + AQLL LE+++P I++
Sbjct: 21 VMPQFEERTAYGFKRQDAYSKLFEDRIVFLGVQVDDASADDVMAQLLVLESQDPDGLITM 80
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG +G R ALPNARIL+
Sbjct: 81 YINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLAAGSEGKRLALPNARILI 140
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQASDIE A ++ +++ L E + G++ ++V L+RD I++A A
Sbjct: 141 HQPAMEGMQGQASDIEIVANELDRMRTWLEETLAAHTGQSVDKVHADLERDKILTAQAAL 200
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL SR
Sbjct: 201 EYGLVDQVLSSRK 213
>gi|302833543|ref|XP_002948335.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
gi|300266555|gb|EFJ50742.1| hypothetical protein VOLCADRAFT_80119 [Volvox carteri f.
nagariensis]
Length = 256
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 84/188 (44%), Positives = 134/188 (71%), Gaps = 6/188 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+E R + S+L ++RIV + G ++D MA L+ AQLL+L++ +P+++I++Y+
Sbjct: 61 PLVIE------RFQGVVSQLFQQRIVRLGGAVDDDMANLLVAQLLYLDSVDPKRDITMYV 114
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ +L++G++G R++LPN+RI++HQ
Sbjct: 115 NSPGGSVTAGMAVFDTMRHIRPDVSTCCIGMAASMGAFILTSGQQGKRYSLPNSRIMIHQ 174
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A +I+ K LN + G++ E + K DRD MS EA ++G
Sbjct: 175 PLGGAQGQATDIEIQANEILHHKLTLNGYLAQFSGQSMETITKDTDRDFFMSPQEAIEYG 234
Query: 200 VVDKVLMS 207
++D ++
Sbjct: 235 LIDAIIAK 242
>gi|260578314|ref|ZP_05846230.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
gi|258603616|gb|EEW16877.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
Length = 188
Score = 193 bits (490), Expect = 1e-47, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 124/176 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 12 VYERLLRERIIFLGSQVDDEIANELCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLSAG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 72 TMKYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ KR + E+ + G+T E++ K DRD +A +A ++G VD V+ S +
Sbjct: 132 AEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVITSAKE 187
>gi|21221075|ref|NP_626854.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
coelicolor A3(2)]
gi|256787754|ref|ZP_05526185.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
lividans TK24]
gi|3834446|gb|AAC70948.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
coelicolor A3(2)]
gi|10280518|emb|CAC09994.1| ATP dependent Clp protease proteolytic subunit 2 [Streptomyces
coelicolor A3(2)]
Length = 236
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ ++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +
Sbjct: 30 PQAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD 89
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++IS+YINSPGG TA AIYDTMQ++KP + T CMGQAAS ++LL+AG G R AL
Sbjct: 90 PDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMAL 149
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP GQ SD+E A +I++++ +L E+ K+ E++ + ++RD I
Sbjct: 150 PNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIREDIERDKI 209
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A +A +G++D+++ +R
Sbjct: 210 LTAEDALSYGLIDQIITTRK 229
>gi|123230949|emb|CAM15338.1| novel protein similar to human and mouse ClpP caseinolytic
protease, ATP-dependent, proteolytic subunit homolog (E.
coli) (CLPP) [Danio rerio]
Length = 220
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 106/171 (61%), Positives = 138/171 (80%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S L+P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +A+L+ AQLLFL++E
Sbjct: 21 QSSPWSSPLIPIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSVASLVIAQLLFLQSE 80
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K I +YINSPGGVVT+G+AIYDTMQ+I PIST+C+GQAASMGSLLL+AG GMR +
Sbjct: 81 SNNKPIHMYINSPGGVVTSGLAIYDTMQYILNPISTWCVGQAASMGSLLLAAGTAGMRHS 140
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
LPNARI++HQPSGG GQA+DI A++I+K+KR++N IY K+ G+ E +
Sbjct: 141 LPNARIMVHQPSGGARGQATDIAIQAEEILKLKRQINNIYSKHTGQLLETI 191
>gi|291451317|ref|ZP_06590707.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
gi|291354266|gb|EFE81168.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
Length = 219
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I+LYINSPGG ++AGMAIYD
Sbjct: 36 VYNRLLGERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDINLYINSPGGSISAGMAIYD 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFIK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 95 TMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 154
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ ++ K+R+ E+ + G++ E++ + DRD SA EA ++G++D+V+ S ++
Sbjct: 155 AERLLHTKKRMAELTAFHTGQSVEQITRDSDRDRWFSADEAKEYGLIDEVIASAANVP 212
>gi|239979447|ref|ZP_04701971.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
Length = 201
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 91/178 (51%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I+LYINSPGG ++AGMAIYD
Sbjct: 18 VYNRLLGERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDINLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFIK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 77 TMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ ++ K+R+ E+ + G++ E++ + DRD SA EA ++G++D+V+ S ++
Sbjct: 137 AERLLHTKKRMAELTAFHTGQSVEQITRDSDRDRWFSADEAKEYGLIDEVIASAANVP 194
>gi|300934280|ref|ZP_07149536.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
resistens DSM 45100]
Length = 198
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 124/176 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P K+ISLYINSPGG VTAGMAIYD
Sbjct: 22 VFERLLRERIIFLGSQVDDEIANKLCAQILLLAAEDPNKDISLYINSPGGSVTAGMAIYD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLSAG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 82 TMRYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ KR + E+ + G+T E++ K DRD +A +A ++G VD V+ S +
Sbjct: 142 AEQFAYTKREMAELIAEFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVITSAKE 197
>gi|326693258|ref|ZP_08230263.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc
argentinum KCTC 3773]
Length = 200
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 102/195 (52%), Positives = 132/195 (67%), Gaps = 2/195 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RIV V G+IED MAT I AQLLFLEA++P KEIS+YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIVLVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG++I DTM FIK P++T MG AASMG+++ S+GEKG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLSITDTMNFIKAPVTTIVMGLAASMGTIIASSGEKGHRFMLPNAEYLIHQ 122
Query: 140 PSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ A+ + K + +LN I GK E + +RD+ MSA E +
Sbjct: 123 PMGGAAGGTQQTDMAIIAEQLTKTRAKLNRILADASGKDLETIAHDTERDYWMSAEETLE 182
Query: 198 WGVVDKVLMSRIDIE 212
+G +D +L +
Sbjct: 183 YGFIDGILTKSGEKP 197
>gi|295132506|ref|YP_003583182.1| ATP-dependent Clp protease proteolytic subunit 2 [Zunongwangia
profunda SM-A87]
gi|294980521|gb|ADF50986.1| ATP-dependent Clp protease proteolytic subunit 2 [Zunongwangia
profunda SM-A87]
Length = 224
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 137/192 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G+ P ++E+ + D++SRL+ +RI+F+ I D +A +I AQLLFLE+ + K+I
Sbjct: 32 VGMTPNIIEERQMNAVAMDVFSRLMMDRIIFMGTGINDQVANIIQAQLLFLESTDSSKDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG +G R LP++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGAEGKRSGLPHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A++I+ +K L +I K+ G++YE+V + DRD+ M A A
Sbjct: 152 MIHQPLGGAQGQASDIEITAREIITLKEELYKIISKHSGQSYEKVYEDSDRDYWMKADRA 211
Query: 196 CDWGVVDKVLMS 207
++G++D++L
Sbjct: 212 KEYGMIDEILTR 223
>gi|326334771|ref|ZP_08200977.1| ATP-dependent Clp protease, protease subunit [Capnocytophaga sp.
oral taxon 338 str. F0234]
gi|325693084|gb|EGD35017.1| ATP-dependent Clp protease, protease subunit [Capnocytophaga sp.
oral taxon 338 str. F0234]
Length = 220
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 98/209 (46%), Positives = 144/209 (68%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ +G + + + + P ++E+ D++SRL+ +RI+F+ + +A +I
Sbjct: 12 IEHQGVSSTYYDAIVNSMTPYIMEERQLNVTQMDVFSRLMMDRIIFLGTDVNSQVANIIQ 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ + QK+I +YINSPGG V +G+ IYDTMQFIKP ++T C G AASM ++LL
Sbjct: 72 AQLLFLESLDAQKDIQIYINSPGGEVYSGLGIYDTMQFIKPQVATICTGLAASMAAVLLC 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG KG R ALP++RI++HQP GG GQASDIE +A++I+KIK L+ I K+ GKT +EV
Sbjct: 132 AGAKGKRSALPHSRIMIHQPLGGAQGQASDIEINAREILKIKEELSLIIAKHSGKTLQEV 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ DRD+ M ASEA D+G++D+VL +
Sbjct: 192 IHSSDRDYWMIASEAKDFGMIDEVLERQK 220
>gi|255645951|gb|ACU23464.1| unknown [Glycine max]
Length = 304
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 128/186 (68%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 103 PMVAE------RFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYV 156
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 157 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 216
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G +DI+ A +++ K LN + G++ +++ + DRD MSA EA ++G
Sbjct: 217 PLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQSLDKINQDTDRDFFMSAKEAKEYG 276
Query: 200 VVDKVL 205
++D V+
Sbjct: 277 LIDGVI 282
>gi|228472130|ref|ZP_04056896.1| Clp protease [Capnocytophaga gingivalis ATCC 33624]
gi|228276333|gb|EEK15057.1| Clp protease [Capnocytophaga gingivalis ATCC 33624]
Length = 219
Score = 193 bits (490), Expect = 2e-47, Method: Composition-based stats.
Identities = 96/204 (47%), Positives = 139/204 (68%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + + + + P ++E+ D++SRL+ +RI+F+ + H+A +I AQL
Sbjct: 15 RGVSSTYYDKIISSMTPYIMEERQLNVTQMDVFSRLMMDRIIFLGTDVNSHVANIIQAQL 74
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
LFLE+ + K+I +YINSPGG V +G+ IYDTMQFIKP ++T C G AASM ++LL AG
Sbjct: 75 LFLESLDASKDIQIYINSPGGEVYSGLGIYDTMQFIKPEVATICTGMAASMAAVLLCAGA 134
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
KG R ALP++R+++HQP GG GQASDIE A++I+KIK L +I + GK+ EV +T
Sbjct: 135 KGKRSALPHSRVMIHQPLGGAQGQASDIEITAREILKIKEELAQIIAHHSGKSLAEVIQT 194
Query: 184 LDRDHIMSASEACDWGVVDKVLMS 207
DRD+ M ASEA D+G++D+VL
Sbjct: 195 GDRDYWMIASEAKDFGMIDEVLTR 218
>gi|150026123|ref|YP_001296949.1| ATP-dependent Clp protease proteolytic subunit [Flavobacterium
psychrophilum JIP02/86]
gi|149772664|emb|CAL44147.1| S14 family, ATP-dependent Clp protease proteolytic subunit
[Flavobacterium psychrophilum JIP02/86]
Length = 233
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 83/191 (43%), Positives = 134/191 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ + K+I
Sbjct: 43 NMTPYIIEERQLNISQLDVFSRLMMDRIIFLGTGIDDQIANIVQAQLLFLESADASKDIQ 102
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG V AG+ IYDTMQ+IKP ++T C G AASMG++LL AG G R ALP++R++
Sbjct: 103 IYLNSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAGAAGKRSALPHSRVM 162
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+D+E + ++++K+K L I + G+T+++V +RD+ M A +A
Sbjct: 163 IHQPSGGAQGVATDMEINLREMLKLKDELYNIISHHSGQTFDKVHADSERDYWMIADQAK 222
Query: 197 DWGVVDKVLMS 207
++G++D+VL
Sbjct: 223 EYGMIDEVLRR 233
>gi|182438717|ref|YP_001826436.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178467233|dbj|BAG21753.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 227
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/199 (44%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 28 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 88 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 147
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L ++ ++ E++ + ++RD I++A +A
Sbjct: 148 HQPSSQTGREQLSDLEIAANEILRMRTQLEQMLARHSTTPLEKISEDIERDKILTAEDAL 207
Query: 197 DWGVVDKVLMSRIDIEEKS 215
+G+VD+++ +R S
Sbjct: 208 AYGLVDQIVSTRKTTAGAS 226
>gi|160916260|ref|ZP_02078467.1| hypothetical protein EUBDOL_02287 [Eubacterium dolichum DSM 3991]
gi|158431984|gb|EDP10273.1| hypothetical protein EUBDOL_02287 [Eubacterium dolichum DSM 3991]
Length = 204
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/201 (45%), Positives = 137/201 (68%), Gaps = 1/201 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+++ E ++L +VP ++E+ GE +YD+YS LLKERI+ + G+I+D M+ ICAQLL+L
Sbjct: 1 MEREKEVIYLVIVPTIIEKNINGEHAYDLYSCLLKERIIILCGEIDDAMSASICAQLLYL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+ + I LYINS GG VTAG+AIYD M +I +ST CMG ASM ++LL AG G
Sbjct: 61 -STCSKAPIQLYINSNGGSVTAGLAIYDIMHYIPCEVSTICMGMCASMAAVLLCAGSNGK 119
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
RFAL N+ I++HQP GG GQA D+E AQ I ++K +L +I K+ + + + + DR
Sbjct: 120 RFALANSEIMIHQPLGGMQGQAIDMEIAAQHIQQVKEKLYQILCKHTKQDKDIIIRDCDR 179
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D M+A +A D+G+VD+++ +
Sbjct: 180 DFYMNAKQALDYGMVDEIITN 200
>gi|269795730|ref|YP_003315185.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
gi|269097915|gb|ACZ22351.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
Length = 232
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/207 (42%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ + P E+T G + D YS+L ++RI+F+ Q++D A + AQLL
Sbjct: 21 AMPYGSPSSRY--IFPQFEERTAYGIKRQDPYSKLFEDRIIFLGVQVDDASADDVMAQLL 78
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE++ P ++I LYINSPGG TA AIYDTMQ+I + T C+GQAAS ++LL+AG
Sbjct: 79 VLESQEPNRDIILYINSPGGSFTAMTAIYDTMQYITSQVQTVCLGQAASAAAVLLAAGTP 138
Query: 125 GMRFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPNAR+L+HQP+ QASDIE HA ++++++ L + G+ E+V K
Sbjct: 139 GKRLALPNARVLIHQPAMEGGNYAQASDIEIHANELIRMREWLESTLALHSGRDVEQVRK 198
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
++RD I+SA +A D+G+VD +L SR
Sbjct: 199 DIERDKILSAQQAVDYGLVDSILESRK 225
>gi|212550900|ref|YP_002309217.1| ATP-dependent Clp protease protease subunit [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
gi|212549138|dbj|BAG83806.1| ATP-dependent Clp protease protease subunit [Candidatus
Azobacteroides pseudotrichonymphae genomovar. CFP2]
Length = 222
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/190 (46%), Positives = 134/190 (70%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++E+ D++SRL+ +RI+F+ +I+D+ A+++ AQLL+L++ P K+IS+YI
Sbjct: 33 PTIIEERQLNVAQMDVFSRLMMDRIIFLGTRIDDYSASVVQAQLLYLDSAEPGKDISIYI 92
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG V AG IYDTMQFI ++T C G AASM ++LL AG KG R AL ++R+++HQ
Sbjct: 93 NSPGGTVYAGYGIYDTMQFISSDVTTICTGMAASMAAVLLVAGTKGKRSALCHSRVMIHQ 152
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQASDIE A++I+KIK+ + I ++ G++YE+V K DRD M+A EA +G
Sbjct: 153 PLGGAQGQASDIEITAREILKIKKEIYTIIAEHSGQSYEQVLKDGDRDFWMNAEEALAYG 212
Query: 200 VVDKVLMSRI 209
++D +L +
Sbjct: 213 MIDGILTKKK 222
>gi|223982668|ref|ZP_03632900.1| hypothetical protein HOLDEFILI_00174 [Holdemania filiformis DSM
12042]
gi|223965367|gb|EEF69647.1| hypothetical protein HOLDEFILI_00174 [Holdemania filiformis DSM
12042]
Length = 193
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 91/194 (46%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P ++EQ+ R +R+YD+ S LLKERI+ +T QI+D ++ +CAQLL+L + + Q +I
Sbjct: 1 MTLIPTIIEQSARSDRAYDLISCLLKERIILLTSQIDDTVSGNLCAQLLYLASRSSQ-DI 59
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG V+AG+AIYDTMQ I+ +ST CMG AASM ++LL+ G +G R+ALPN+ I
Sbjct: 60 QLYINSPGGSVSAGLAIYDTMQLIRCDVSTICMGMAASMAAVLLAGGTRGKRYALPNSEI 119
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA+D++ A+ I++I++RLN + + G++ E+ + DRD SA EA
Sbjct: 120 MIHQPLGGVQGQAADVKIAAEHILQIRQRLNTLLANDTGRSLREISEDSDRDRYFSAEEA 179
Query: 196 CDWGVVDKVLMSRI 209
++G++D ++ +
Sbjct: 180 KNYGLIDDLVHKQK 193
>gi|296129240|ref|YP_003636490.1| Endopeptidase Clp [Cellulomonas flavigena DSM 20109]
gi|296021055|gb|ADG74291.1| Endopeptidase Clp [Cellulomonas flavigena DSM 20109]
Length = 206
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 88/177 (49%), Positives = 126/177 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLL+ERI+++ ++ D A ICAQ++ L AE+P K+I LYINSPGG +TAGMAIYD
Sbjct: 22 IYNRLLRERIIWLGSEVRDENANAICAQMMLLAAEDPDKDIWLYINSPGGSITAGMAIYD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP ++T MG AASMG LLS+G KG R+A P+AR+++HQPSGG G A+D+ +
Sbjct: 82 TMQYIKPDVATIAMGMAASMGQFLLSSGTKGKRYATPHARVMMHQPSGGIGGTATDVRIN 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A I+ +K+ L E+ + GK+ E++ DRD +A EA ++G +D V+ S +
Sbjct: 142 AALILHMKKVLAELIAEQTGKSVEQINADSDRDRWFTAPEALEYGFIDHVVSSSNSV 198
>gi|254392447|ref|ZP_05007628.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
clavuligerus ATCC 27064]
gi|294812617|ref|ZP_06771260.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
gi|326440935|ref|ZP_08215669.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197706115|gb|EDY51927.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
clavuligerus ATCC 27064]
gi|294325216|gb|EFG06859.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
Length = 219
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 90/203 (44%), Positives = 139/203 (68%), Gaps = 3/203 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + +VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+
Sbjct: 14 QPDSRY--VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESM 71
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++IS+YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R A
Sbjct: 72 DPDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMA 131
Query: 130 LPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LP+AR+L+HQPS Q SD+E A++I++++ +L E+ K+ E+V ++RD
Sbjct: 132 LPHARVLIHQPSSQTGREQLSDLEIAAKEILRMRVQLEEMLAKHSTTPIEKVRDDIERDK 191
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
I++A +A +G++D+++ +R
Sbjct: 192 ILTAEDALAYGLIDQIVSTRKST 214
>gi|329934561|ref|ZP_08284602.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
griseoaurantiacus M045]
gi|329305383|gb|EGG49239.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
griseoaurantiacus M045]
Length = 235
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/193 (46%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 36 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 95
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 96 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLI 155
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L ++ K+ E++ + ++RD I++A EA
Sbjct: 156 HQPYSETGRGQVSDLEIAANEILRMRAQLEDLLAKHSTTPIEKIREDIERDKILTAEEAL 215
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 216 SYGLIDQIISTRK 228
>gi|300859022|ref|YP_003784005.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|300686476|gb|ADK29398.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudotuberculosis FRC41]
gi|302206721|gb|ADL11063.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
pseudotuberculosis C231]
gi|302331275|gb|ADL21469.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
pseudotuberculosis 1002]
gi|308276964|gb|ADO26863.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
pseudotuberculosis I19]
Length = 199
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 20 VYERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPNRDISLYINSPGGSVTAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I+T+ MG AASMG LLS G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 80 TMKYSPCDIATYGMGLAASMGQFLLSGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + KR + E+ ++ G+T+E++ K DRD +A++A ++G+VD V+ S
Sbjct: 140 AEQFAQTKREMAELIAEHTGQTFEQITKDSDRDRWFTAAQAKEYGIVDHVIAS 192
>gi|295111709|emb|CBL28459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 184
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 94/180 (52%), Positives = 130/180 (72%), Gaps = 1/180 (0%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
+GE D+YS L ++RIVF+ I+D +A I AQLL L + +KEISLYINSPGG V+
Sbjct: 6 KGEGR-DVYSCLFEDRIVFLGSPIDDAVANGIVAQLLLLANRDEKKEISLYINSPGGSVS 64
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AG+AIYDTMQF+ P++T C+GQAASMG++LL+AG KG R ALP+A+++LHQP GG GQ
Sbjct: 65 AGLAIYDTMQFVPCPVATTCIGQAASMGAVLLAAGAKGRRSALPHAKVMLHQPLGGAGGQ 124
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
ASD+ AQ+++K + LN + + + E VEK DRD MSA EA +G++D+V+ +
Sbjct: 125 ASDVALFAQELIKTREVLNALIAHHTAQKVETVEKDTDRDFFMSAQEAQRYGIIDEVIRN 184
>gi|319440930|ref|ZP_07990086.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
variabile DSM 44702]
Length = 227
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 139/210 (66%), Gaps = 3/210 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
++ E + + + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I
Sbjct: 15 LTGEVAGAQLPQSRY--ILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIM 72
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE +P ++I++YINSPGG T+ MAIYDTMQ+++P I T C+GQAAS ++LL+
Sbjct: 73 AQLLVLEGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDIVTVCLGQAASAAAVLLA 132
Query: 121 AGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R ALPN+R+L+HQP+ GQ SD+E A++I +++R + E ++ G+T E+
Sbjct: 133 AGTPGKRAALPNSRVLIHQPATQGTQGQVSDLEIQAREIERMRRLMEETLSRHTGQTAEQ 192
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V DRD ++A EA ++G++D+V R
Sbjct: 193 VRLDTDRDKFLTADEAKEYGIIDQVFEYRK 222
>gi|17373662|sp|Q9ZH58|CLPP2_STRCO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 218
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ ++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +
Sbjct: 12 PQAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD 71
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++IS+YINSPGG TA AIYDTMQ++KP + T CMGQAAS ++LL+AG G R AL
Sbjct: 72 PDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMAL 131
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP GQ SD+E A +I++++ +L E+ K+ E++ + ++RD I
Sbjct: 132 PNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIREDIERDKI 191
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A +A +G++D+++ +R
Sbjct: 192 LTAEDALSYGLIDQIITTRK 211
>gi|159039408|ref|YP_001538661.1| endopeptidase Clp [Salinispora arenicola CNS-205]
gi|157918243|gb|ABV99670.1| Endopeptidase Clp [Salinispora arenicola CNS-205]
Length = 213
Score = 192 bits (489), Expect = 2e-47, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+F+ ++ D +A ICAQLL L AE+P ++I+L+INSPGG V +GMAIYD
Sbjct: 29 VYNRLLKERIIFLGSEVTDQVANRICAQLLLLAAEDPDRDINLWINSPGGSVYSGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI +ST MG AASMG LLL AG KG R+ALP+ARI++HQPSGG G ASDI
Sbjct: 89 TMQFIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARIMMHQPSGGMGGTASDIAIQ 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR E + G++ ++E DRD +A EA D+G +DKV+ + E
Sbjct: 149 AEQMLYTKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDKVITGAAQVPE 207
>gi|148240100|ref|YP_001225487.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848639|emb|CAK24190.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 200
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 90/199 (45%), Positives = 136/199 (68%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V + ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAG+AIYDTM+++K + T C+G AASMG+ LL+AG +G R ALP+
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLAAGTQGKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP G QASDIE AQ+I+++K LN G+++E++EK DRD+ +S
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAQEILRMKEMLNRSMADMSGQSFEKIEKDTDRDYFLS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
+ EA D+G++D+V+ +
Sbjct: 181 SQEAMDYGLIDRVIAHPNE 199
>gi|168048812|ref|XP_001776859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671715|gb|EDQ58262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 265
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 127/178 (71%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + ++L ++RI+ G ++D MA LI AQLL+L+A +P ++I +Y+NSPGG VTAG
Sbjct: 66 ERFQSVITQLFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAG 125
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+RI++HQP GG GQ +
Sbjct: 126 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQT 185
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+ K LN + G+ YE++ + DRD MSA EA ++G++D V+ +
Sbjct: 186 DIEIQANEILHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAKEYGLIDAVISN 243
>gi|319935305|ref|ZP_08009743.1| ATP-dependent Clp protease proteolytic subunit [Coprobacillus sp.
29_1]
gi|319809713|gb|EFW06114.1| ATP-dependent Clp protease proteolytic subunit [Coprobacillus sp.
29_1]
Length = 194
Score = 192 bits (488), Expect = 2e-47, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 137/192 (71%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+ + E +YDI+SRLL++RI+ + G+I D +A+ I +QLL+LE+ + +I
Sbjct: 1 MHFIPTVILKKQSKEYAYDIFSRLLEDRIIMLCGEINDEVASSIVSQLLYLESLDSSADI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYDTM F+K +ST +G +ASMG+ LL+AG+KG R AL N+ I
Sbjct: 61 YMYINSPGGSVSAGLAIYDTMNFVKCDVSTISIGLSASMGAFLLAAGQKGKRCALQNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG +GQASDIE + I++ K +LN++ + + +++K DRD+ M+A +A
Sbjct: 121 MIHQPLGGTNGQASDIEITTKHILRQKEKLNKLLSEMTSQPLRKIKKDTDRDYFMNAYDA 180
Query: 196 CDWGVVDKVLMS 207
++G++D+VL
Sbjct: 181 LEYGLIDEVLTK 192
>gi|256372514|ref|YP_003110338.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
gi|256009098|gb|ACU54665.1| Endopeptidase Clp [Acidimicrobium ferrooxidans DSM 10331]
Length = 211
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 79/176 (44%), Positives = 116/176 (65%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++ RLL+ERIVF+ ++ A ICAQLL L AE+P+++IS INSPGG + G+A+Y
Sbjct: 25 DVFQRLLRERIVFLGTEVSQASANQICAQLLLLAAEDPERDISFIINSPGGSIYDGLAVY 84
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTMQ++ +ST +G AASM LL AG G R+ALP+ARIL+HQP GQA+DI
Sbjct: 85 DTMQYVSCDVSTIAIGMAASMAQFLLCAGTHGKRYALPHARILMHQPLAQMQGQAADIAI 144
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
A+ I +KR+L E + G+ E ++ +RD +A EA ++G +D+V+ ++
Sbjct: 145 QAEQITYLKRQLAERIAFHTGQPLERIQADSERDRWFTADEALEYGFIDQVIRTKS 200
>gi|293189653|ref|ZP_06608370.1| Clp protease [Actinomyces odontolyticus F0309]
gi|315604695|ref|ZP_07879758.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 180 str. F0310]
gi|292821391|gb|EFF80333.1| Clp protease [Actinomyces odontolyticus F0309]
gi|315313707|gb|EFU61761.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 214
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 142/210 (67%), Gaps = 3/210 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
FE A++ + + ++P E+T G R + Y++L ++RIVF+ Q++D A + AQ
Sbjct: 7 FEAVARQMPQARY--VLPDFEERTAYGFRRQNPYTKLFEDRIVFLGVQVDDASADDVMAQ 64
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG
Sbjct: 65 LLVLESQDPDSLITMYINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLAAG 124
Query: 123 EKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ GQASDI+ A +I +++ L + K+ GK E+V
Sbjct: 125 SPGKRLALPNARVLIHQPAMEGMQGQASDIQIVADEIDRMRAWLEDTISKHSGKPVEQVR 184
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ ++RD I++A +A ++G++D+VL SR +
Sbjct: 185 RDIERDKILTAPQAAEYGLIDQVLESRKAL 214
>gi|162606094|ref|XP_001713562.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794482|gb|AAK39857.1|AF165818_65 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 233
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/202 (46%), Positives = 140/202 (69%), Gaps = 3/202 (1%)
Query: 14 VFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP V + DIY+RL +ERI+F+ +I+D +A I A +L+L++E+
Sbjct: 31 KMMPIGVPKVAYRVPGSPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSED 90
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K I +YINSPGG V +G+A+YDTM+ IK + T +G AASM S +L+AGEKG R AL
Sbjct: 91 NSKPIYMYINSPGGSVISGLAMYDTMRHIKSEVITINVGLAASMSSFILAAGEKGKRLAL 150
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P++RI++HQP GG GQASDIE AQ I+KI++ L E Y + G++YE+V + +DRD+ M
Sbjct: 151 PHSRIMIHQPMGGAQGQASDIEVEAQQILKIRKSLTEDYAEMSGRSYEKVLQDMDRDNFM 210
Query: 191 SASEACDWGVVDKVLMSRIDIE 212
S+ EA D+G++DKV+ S++ +
Sbjct: 211 SSYEALDYGLIDKVIESKLKFK 232
>gi|89889548|ref|ZP_01201059.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria
bacterium BBFL7]
gi|89517821|gb|EAS20477.1| ATP-dependent Clp protease proteolytic subunit 2 [Flavobacteria
bacterium BBFL7]
Length = 224
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/191 (48%), Positives = 134/191 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ +D++SRL+ +RI+F+ + D +A +I AQLLFLE+ + K+I
Sbjct: 33 NLTPNIIEERQMNIAIFDVFSRLMMDRIIFMGTGVNDQVANIIQAQLLFLESTDANKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG G R ALP++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGADGKRSALPHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ S G GQASDIE A+++VK++ L I K+ +TYE+V DRD+ M A+EA
Sbjct: 153 IHQVSSGAQGQASDIEITAREVVKLREELYTIIAKHSKQTYEKVYADSDRDYWMKAAEAK 212
Query: 197 DWGVVDKVLMS 207
++G++D+VL
Sbjct: 213 EYGMIDEVLTR 223
>gi|239979446|ref|ZP_04701970.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces albus
J1074]
gi|291451316|ref|ZP_06590706.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces
albus J1074]
gi|291354265|gb|EFE81167.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces
albus J1074]
Length = 227
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 89/193 (46%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 30 IVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESIDPDRDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 90 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGSPGKRMALPNARVLI 149
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L E+ K+ +++ ++RD I++A +A
Sbjct: 150 HQPYSETGRGQVSDLEIAANEILRMRAQLEEMLAKHSTTPLDKIRDDIERDKILTAEDAL 209
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 210 AYGLIDQIVSTRK 222
>gi|302560651|ref|ZP_07312993.1| Clp protease [Streptomyces griseoflavus Tu4000]
gi|302478269|gb|EFL41362.1| Clp protease [Streptomyces griseoflavus Tu4000]
Length = 226
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ++KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQYVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L E+ K+ + +++ + ++RD I++A +A
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTRPIDKIREDIERDKILTAEDAL 206
Query: 197 DWGVVDKVLMSRI 209
++G++D+++ +R
Sbjct: 207 EYGLIDQIITTRK 219
>gi|255071043|ref|XP_002507603.1| predicted protein [Micromonas sp. RCC299]
gi|226522878|gb|ACO68861.1| predicted protein [Micromonas sp. RCC299]
Length = 272
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 91/196 (46%), Positives = 136/196 (69%), Gaps = 6/196 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V+E R + S+L+ +RI+ + G ++D LI AQLL+L+A +P+K+I+LY+
Sbjct: 73 PIVME------RFQGVASQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDATDPKKDITLYV 126
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ ++P IST C+G AASMG+ LL++G++G RF+LPN+RI++HQ
Sbjct: 127 NSPGGSVTAGMAVFDTMRHVRPDISTVCVGLAASMGAFLLASGQQGKRFSLPNSRIMIHQ 186
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG GQA+DIE A +I+ K LN + GK + V + DRD MSA EA ++G
Sbjct: 187 PLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTGKPLDTVMQDTDRDFFMSAFEAKEYG 246
Query: 200 VVDKVLMSRIDIEEKS 215
++D V+ D+ +S
Sbjct: 247 LIDSVIEHPTDVAVRS 262
>gi|308177634|ref|YP_003917040.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
arilaitensis Re117]
gi|307745097|emb|CBT76069.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
arilaitensis Re117]
Length = 219
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 86/208 (41%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
E + + + ++P E+T G + D Y++L ++RI+F+ Q++D A + AQL
Sbjct: 6 EAVSGQMPSARY--ILPQFEERTPYGFKRQDPYAKLFEDRIIFLGAQVDDASADDVMAQL 63
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+ +P+++++LYINSPGG TA AIYDT+QFI+P + T C+GQAAS ++LL+AG
Sbjct: 64 LVLESMDPERDVTLYINSPGGSFTAMTAIYDTIQFIRPEVQTVCLGQAASAAAVLLAAGT 123
Query: 124 KGMRFALPNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ G G A+D++ A+++++++ L E + G+ E+V
Sbjct: 124 PGKRLALPNARVLIHQPAMGGGERGTATDLQIQAEEVMRMRSWLEETIASHSGQDVEKVR 183
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
++RD M+ASEA +G+VD+VL R
Sbjct: 184 DDVERDLFMTASEAKVYGIVDEVLTPRK 211
>gi|124007705|ref|ZP_01692408.1| Clp protease [Microscilla marina ATCC 23134]
gi|123986827|gb|EAY26599.1| Clp protease [Microscilla marina ATCC 23134]
Length = 232
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 132/192 (68%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ V+E+ R D++SRL+ +RI+F+ I+D +A ++ AQLLFLE+ + +K+I
Sbjct: 38 NNMTRTVIEERPTNFREIDVFSRLIMDRIIFLGMGIDDLVANVVTAQLLFLESVDSKKDI 97
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQ++ P + T C G AASMG++LL+ G + R AL ++R+
Sbjct: 98 LVYINSPGGSVYAGLGIYDTMQYVNPDVVTICTGLAASMGAVLLAGGAENKRSALEHSRV 157
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQASDIE A+ I+ +K L EI K+ GK E++EK DRD+ M + A
Sbjct: 158 MIHQPLGGAQGQASDIEITAKQILILKHELYEILAKHSGKAIEDIEKHADRDYWMKSDAA 217
Query: 196 CDWGVVDKVLMS 207
++G++D+VL+
Sbjct: 218 KEYGLIDEVLVK 229
>gi|329934560|ref|ZP_08284601.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
griseoaurantiacus M045]
gi|329305382|gb|EGG49238.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
griseoaurantiacus M045]
Length = 206
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 96/199 (48%), Positives = 132/199 (66%), Gaps = 2/199 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L A +P+K
Sbjct: 1 MTNLMPSAAGEPSIGGGLGDQVYNRLLGERIIFLGQPVDDDIANKITAQLLLLAA-DPEK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+LYINSPGG +TAGMAIYDTMQFIK + T MG AASMG LLSAG G RFALPNA
Sbjct: 60 DINLYINSPGGSITAGMAIYDTMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNA 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQPS G +G ASDI+ HA+ ++ K+R+ E+ + G+T E++ + DRD A
Sbjct: 120 EILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSHHTGQTVEQITRDSDRDRWFDAY 179
Query: 194 EACDWGVVDKVLMSRIDIE 212
EA ++G++D V+ +
Sbjct: 180 EAKEYGLIDDVITHAASLP 198
>gi|255548433|ref|XP_002515273.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223545753|gb|EEF47257.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 305
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 90/188 (47%), Positives = 130/188 (69%), Gaps = 6/188 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 109 PMVHE------RFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYV 162
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 163 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 222
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G SDI+ A +++ K LN + G++ E++ + DRD+ MSA EA D+G
Sbjct: 223 PLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTGQSLEKINQDTDRDYFMSAKEATDYG 282
Query: 200 VVDKVLMS 207
++D V+ +
Sbjct: 283 LIDGVITN 290
>gi|309811146|ref|ZP_07704942.1| endopeptidase Clp [Dermacoccus sp. Ellin185]
gi|308434876|gb|EFP58712.1| endopeptidase Clp [Dermacoccus sp. Ellin185]
Length = 221
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 138/206 (66%), Gaps = 3/206 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G + ++P E+T+ G + D Y++L ++RI+F+ Q++D A I AQL+
Sbjct: 13 GVTAPMPTSRY--ILPQFEERTSYGTKRLDPYTKLFEDRIIFLGVQVDDASADDIIAQLI 70
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE+++P ++I +YINSPGG TA AIYDTMQ+I+P + TF +GQAAS ++LL AG
Sbjct: 71 VLESQDPDRDIVMYINSPGGSFTALTAIYDTMQYIRPDVHTFVLGQAASAAAVLLGAGAP 130
Query: 125 GMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
G R+ALPNAR+L+HQP+ GQASD+E A +I++++ L E K+ G++ E+V
Sbjct: 131 GKRYALPNARVLIHQPAMEGSGGQASDVEIQANEIMRMREWLEETLAKHSGRSIEQVRAD 190
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD I++A A ++G++D+VL SR
Sbjct: 191 IDRDKILTAEMAKEYGLIDEVLTSRK 216
>gi|297160512|gb|ADI10224.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
bingchenggensis BCW-1]
Length = 200
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 95/178 (53%), Positives = 127/178 (71%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L AE P K+I+LYINSPGG +TAGMAIYD
Sbjct: 17 VYNRLLGERIIFLGQPVDDDIANKITAQLLLLAAE-PDKDINLYINSPGGSITAGMAIYD 75
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 76 TMQYIKNDVITIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 135
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ +++ KR++ ++ + G+T E++ + DRD SA EA +G+VD+V+ S I
Sbjct: 136 AEQLLRTKRKMADLTAFHTGQTVEQITRDSDRDRWFSAEEAKAYGLVDEVIASAAHIP 193
>gi|77455725|gb|ABA86601.1| chloroplast clp protease P [Isochrysis galbana]
Length = 277
Score = 192 bits (488), Expect = 3e-47, Method: Composition-based stats.
Identities = 91/194 (46%), Positives = 135/194 (69%), Gaps = 4/194 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PMV G+ D+ SRLLK+RI+ + ++D +A L+ AQLL+L E+ +K+I++Y
Sbjct: 78 LPMV----GSGDDKMDVMSRLLKDRILLLGQGVDDEVANLLVAQLLYLANEDARKDITMY 133
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AGMAI+DTMQ++ ++T C G AASMG+ LL AG+KG R +LPN+RI++H
Sbjct: 134 INSPGGSVSAGMAIFDTMQYVPCDLNTVCFGTAASMGAFLLGAGQKGKRRSLPNSRIMIH 193
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+ I+ L E G+ +++E DRD M+ EA D+
Sbjct: 194 QPLGGAQGQAADIEIQAKEILFIRALLCEYIADYTGQPVDKIEDDCDRDFFMTPEEAKDY 253
Query: 199 GVVDKVLMSRIDIE 212
G++D+VL S++ I
Sbjct: 254 GIIDEVLASKVRIP 267
>gi|226360502|ref|YP_002778280.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
gi|226238987|dbj|BAH49335.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
Length = 208
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG V+AGMAI+D
Sbjct: 27 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPSRDISLYINSPGGSVSAGMAIFD 86
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + ++TF MG AASMG LLSAG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 87 TMQFAECDVATFGMGLAASMGQFLLSAGAKGKRYALPHARIMMHQPSAGIGGTASDIAIM 146
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ ++ G+T E++ DRD +A +A ++G VD V+
Sbjct: 147 AEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAQQALEYGFVDHVVSR 199
>gi|226307302|ref|YP_002767262.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229493230|ref|ZP_04387022.1| Clp protease [Rhodococcus erythropolis SK121]
gi|226186419|dbj|BAH34523.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|229319961|gb|EEN85790.1| Clp protease [Rhodococcus erythropolis SK121]
Length = 208
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/173 (53%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAI+D
Sbjct: 27 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIFD 86
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + I+TF MG AASMG LLSAG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 87 TMQFAECDIATFGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGIGGSASDIAIM 146
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ ++ G+T E++ DRD +A EA ++G VD V+
Sbjct: 147 AEQFKHTKREMAELIAQHTGQTVEQITADSDRDRWFTAKEALEYGFVDHVVSR 199
>gi|256824761|ref|YP_003148721.1| ATP-dependent Clp protease proteolytic subunit ClpP [Kytococcus
sedentarius DSM 20547]
gi|256688154|gb|ACV05956.1| ATP-dependent Clp protease proteolytic subunit ClpP [Kytococcus
sedentarius DSM 20547]
Length = 240
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F QI+D A I AQLL LE+++P +++ +
Sbjct: 43 VLPQFEERTAYGTKRQDPYTKLFEDRIIFCGVQIDDASADDIIAQLLVLESQDPDRDVLM 102
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQFI+P + TF +GQAAS G++LL+AG G RFALPN+RIL+
Sbjct: 103 YINSPGGSFTAMTAIYDTMQFIRPDVQTFVLGQAASAGAVLLAAGAPGKRFALPNSRILI 162
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G ASD+E A ++++++ L E + K+ G+T E+V K ++RD I+SA+EA
Sbjct: 163 HQPAMEGMGGMASDLEITANEVLRMRTWLEETWAKHSGQTPEKVRKDIERDKILSAAEAQ 222
Query: 197 DWGVVDKVLMSRI 209
++G+VD VL SR
Sbjct: 223 EYGLVDAVLPSRK 235
>gi|289771641|ref|ZP_06531019.1| Clp protease [Streptomyces lividans TK24]
gi|289701840|gb|EFD69269.1| Clp protease [Streptomyces lividans TK24]
Length = 224
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 138/200 (69%), Gaps = 1/200 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ ++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +
Sbjct: 18 PQAESRYVIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD 77
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++IS+YINSPGG TA AIYDTMQ++KP + T CMGQAAS ++LL+AG G R AL
Sbjct: 78 PDRDISVYINSPGGSFTALTAIYDTMQYVKPDVQTVCMGQAASAAAVLLAAGTPGKRMAL 137
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP GQ SD+E A +I++++ +L E+ K+ E++ + ++RD I
Sbjct: 138 PNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEKIREDIERDKI 197
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A +A +G++D+++ +R
Sbjct: 198 LTAEDALSYGLIDQIITTRK 217
>gi|330469650|ref|YP_004407393.1| endopeptidase clp [Verrucosispora maris AB-18-032]
gi|328812621|gb|AEB46793.1| endopeptidase clp [Verrucosispora maris AB-18-032]
Length = 212
Score = 192 bits (487), Expect = 3e-47, Method: Composition-based stats.
Identities = 92/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+F+ ++ D +A ICAQLL L AE+P ++I L+INSPGG V +GMAIYD
Sbjct: 28 VYNRLLKERIIFLGSEVNDQVANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYD 87
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I +ST MG AASMG LLL AG KG R+ALP+ARI++HQPSGG G ASDI
Sbjct: 88 TMQYIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARIMMHQPSGGLGGTASDIAIQ 147
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR E + G++ ++E DRD +A EA D+G +DKV++ + E
Sbjct: 148 AEQMLYTKRMFQERVAHHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDKVIIGAAQVPE 206
>gi|119025606|ref|YP_909451.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
adolescentis ATCC 15703]
gi|118765190|dbj|BAF39369.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
adolescentis ATCC 15703]
Length = 233
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++ + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQNRY--VLPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGRDIEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A EA ++G+VD+VL R
Sbjct: 214 LTAQEAKEYGIVDEVLEHRS 233
>gi|256396401|ref|YP_003117965.1| ATP-dependent Clp protease proteolytic subunit [Catenulispora
acidiphila DSM 44928]
gi|256362627|gb|ACU76124.1| Endopeptidase Clp [Catenulispora acidiphila DSM 44928]
Length = 208
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 123/178 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL+ RI+F+ Q++D +A +CAQLL L AE+ +K+I YINSPGG V+AG+AIYD
Sbjct: 23 VYNRLLRNRIIFLGSQVDDDIANSLCAQLLLLTAEDSEKDIYFYINSPGGSVSAGLAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM ++ I T MG AASMG LL+AG RFALPN ILLHQ S G G A+DI
Sbjct: 83 TMMYVPNDIVTVGMGMAASMGQFLLTAGTPNKRFALPNTEILLHQGSAGIGGSAADIRIQ 142
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ +++ K+R+ E+ ++ G+T +++EK DRD S++EA ++G++D ++ D+
Sbjct: 143 AERLLRSKKRMAELTAQHTGQTLDKIEKDSDRDTWFSSAEAKEYGLIDDIMTHANDVP 200
>gi|111018382|ref|YP_701354.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus jostii
RHA1]
gi|116243119|sp|Q0SGZ0|CLPP2_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|110817912|gb|ABG93196.1| ATP-dependent protease proteolytic subunit [Rhodococcus jostii
RHA1]
Length = 195
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG V+AGMAI+D
Sbjct: 14 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPSRDISLYINSPGGSVSAGMAIFD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + ++TF MG AASMG LLSAG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 74 TMQFAECDVATFGMGLAASMGQFLLSAGAKGKRYALPHARIMMHQPSAGIGGTASDIAIM 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR + E+ ++ G+T E++ DRD +A +A ++G VD V+
Sbjct: 134 AEQFAHTKREMAELIAEHTGQTVEQITADSDRDRWFTAQQALEYGFVDHVVSR 186
>gi|225437581|ref|XP_002277104.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297743987|emb|CBI36957.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 127/186 (68%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 94 PMVQE------RFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYV 147
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+RI++HQ
Sbjct: 148 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASMGAFLLSCGTKGKRYSLPNSRIMIHQ 207
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G +DI+ A +++ K LN + G++ E++ + DRD MSA EA ++G
Sbjct: 208 PLGGAQGGQTDIDIQANEMLHHKANLNGYLSYHTGQSLEKINQDTDRDFFMSAKEAKEYG 267
Query: 200 VVDKVL 205
++D V+
Sbjct: 268 LIDGVI 273
>gi|257068142|ref|YP_003154397.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium faecium DSM 4810]
gi|256558960|gb|ACU84807.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium faecium DSM 4810]
Length = 233
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 93/202 (46%), Positives = 138/202 (68%), Gaps = 3/202 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++P E+T G + D Y++L ++RI+F+ Q++D A + AQLL LE+++
Sbjct: 24 PMPTSRYVLPQYEERTAYGMKRQDPYTKLFEDRIIFLGVQVDDASADDVMAQLLVLESQD 83
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I+LYINSPGG TA AIYDTMQ+IKP ++T C+GQAAS ++LL+AG G R AL
Sbjct: 84 PDRDITLYINSPGGSFTALTAIYDTMQYIKPEVTTVCLGQAASAAAVLLAAGSPGKRLAL 143
Query: 131 PNARILLHQPSG---GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
PNARIL+HQP+ G GQASD+E A +I++++ L E + G+T E+V K ++RD
Sbjct: 144 PNARILIHQPAMGGEGGGGQASDLEIQANEIMRMREWLEETLAHHSGRTKEQVSKDIERD 203
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A A ++G+VD+VL SR
Sbjct: 204 KILTAKAALEYGLVDQVLESRK 225
>gi|154509333|ref|ZP_02044975.1| hypothetical protein ACTODO_01858 [Actinomyces odontolyticus ATCC
17982]
gi|153798967|gb|EDN81387.1| hypothetical protein ACTODO_01858 [Actinomyces odontolyticus ATCC
17982]
Length = 214
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 142/210 (67%), Gaps = 3/210 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
FE A++ + + ++P E+T G R + Y++L ++RIVF+ Q++D A + AQ
Sbjct: 7 FEAVARQMPQARY--VLPDFEERTAYGFRRQNPYTKLFEDRIVFLGVQVDDASADDVMAQ 64
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG
Sbjct: 65 LLVLESQDPDSLITMYINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLAAG 124
Query: 123 EKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ GQASDI+ A +I +++ L + K+ GK E+V
Sbjct: 125 SPGKRLALPNARVLIHQPAMEGMQGQASDIQIVADEIDRMRAWLEDTISKHSGKPVEQVR 184
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ ++RD I++A +A ++G++D+VL SR +
Sbjct: 185 RDIERDKILTAPQAAEYGLIDQVLESRKAL 214
>gi|305681092|ref|ZP_07403899.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
gi|305659297|gb|EFM48797.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
Length = 191
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/172 (50%), Positives = 124/172 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 12 VYERLLRDRIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM + I+T+ MG AASMG LL+ G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 72 TMTYSPCDIATYAMGLAASMGQFLLTGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ + KR + E+ ++ G+T+E++ K DRD +A +A ++G+VD V+
Sbjct: 132 AEQFAQTKREMAELIAEHSGQTFEQITKDSDRDRWFTAQQALEYGLVDHVIT 183
>gi|302545417|ref|ZP_07297759.1| Clp protease [Streptomyces hygroscopicus ATCC 53653]
gi|302463035|gb|EFL26128.1| Clp protease [Streptomyces himastatinicus ATCC 53653]
Length = 223
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 25 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNARIL+
Sbjct: 85 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARILI 144
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L E+ K+ E++ ++RD I++A E+
Sbjct: 145 HQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPIEKIRDDIERDKILTAEESL 204
Query: 197 DWGVVDKVLMSRI 209
++G+VD+++ +R
Sbjct: 205 EYGLVDQIVSTRK 217
>gi|116791922|gb|ABK26160.1| unknown [Picea sitchensis]
Length = 303
Score = 192 bits (487), Expect = 4e-47, Method: Composition-based stats.
Identities = 88/178 (49%), Positives = 127/178 (71%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + S+L + RI+ G ++D MA LI AQLL+L+A +P ++I +YINSPGG VTAG
Sbjct: 112 ERFQSVISQLFQHRIIRCGGAVDDDMANLIVAQLLYLDAADPNRDIIMYINSPGGSVTAG 171
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MA++DTM+ I+P +ST C+G AASMG+ LLS+G KG R++LPN+RI++HQP GG GQ S
Sbjct: 172 MAVFDTMRHIRPDVSTVCVGLAASMGAFLLSSGTKGKRYSLPNSRIMIHQPLGGGQGQQS 231
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
D+E A +I+ K LN + G++ E++ + DRD MSA EA D+G++D V+ +
Sbjct: 232 DLEIQANEILHHKANLNGYLAYHTGQSIEKIVEDTDRDFFMSAKEAKDYGLIDGVIAN 289
>gi|289641548|ref|ZP_06473710.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
gi|289508643|gb|EFD29580.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
Length = 211
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 86/181 (47%), Positives = 121/181 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+++RLL+ERI+F+ +ED +A I QLL L AE+P ++ISLYINSPGG V+AGMAIYD
Sbjct: 28 VFNRLLRERIIFLGSVVEDQIANTIIGQLLLLSAEDPNRDISLYINSPGGSVSAGMAIYD 87
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
MQ+++ I T +G AASMG LL AG G R++LP+ RI++HQPSGG G ASDI
Sbjct: 88 VMQYVENDIVTVALGLAASMGQFLLCAGTAGKRYSLPHTRIMMHQPSGGIGGTASDIAIQ 147
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ ++ KR + E + G+ E++E+ DRD +A EA D+G VD V+ + +
Sbjct: 148 AEQMLYTKRMMQERIAFHTGQPVEQIERDSDRDRWFTAVEAKDYGFVDHVVSQARQVPSE 207
Query: 215 S 215
S
Sbjct: 208 S 208
>gi|284029222|ref|YP_003379153.1| endopeptidase Clp [Kribbella flavida DSM 17836]
gi|283808515|gb|ADB30354.1| Endopeptidase Clp [Kribbella flavida DSM 17836]
Length = 211
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 132/193 (68%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+ Q+ RGER D+YS LL ERI+++ I+ +A + AQLL LEA+ P ++I+LY
Sbjct: 6 IPNVITQSPRGERIMDVYSHLLSERIIYLGTGIDAGVANALIAQLLHLEADKPDQDINLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
IN GG +TA +AIYDT+Q+I+ P+ST C+GQA + G++LL+AGE G R LP+ARI+LH
Sbjct: 66 INCEGGDMTAMLAIYDTIQYIRSPVSTLCVGQAIAAGAVLLAAGEPGRRAVLPHARIVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+ G D+ A ++V+++ ++ I + G+T E++ DRDH+++A A +
Sbjct: 126 QPAARGQGTIPDLILQADEVVRVRAQVESILSAHTGQTIEQLRHDTDRDHVLTAEGARAY 185
Query: 199 GVVDKVLMSRIDI 211
G+VD+V+ R +
Sbjct: 186 GIVDEVIQHRAQV 198
>gi|86741463|ref|YP_481863.1| ATP-dependent Clp protease proteolytic subunit [Frankia sp. CcI3]
gi|108935918|sp|Q2J9A8|CLPP4_FRASC RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|86568325|gb|ABD12134.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP1
peptidase. Serine peptidase. MEROPS family S14 [Frankia
sp. CcI3]
Length = 238
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 119/179 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++SRLL+ RIVF+ +ED +A I A+LL L AE+P +I LYINSPGG V+AGMAIYD
Sbjct: 35 VFSRLLENRIVFLGSVVEDAVANAISAKLLLLAAEDPAADIYLYINSPGGSVSAGMAIYD 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++ ++T +G A SMG LL AG G R+ALP+ARI++HQP GG G A+DI
Sbjct: 95 TMQYVGNDVATVALGLAGSMGQFLLCAGTAGKRYALPHARIMMHQPHGGIGGTAADISIQ 154
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR L E + G+T E++E DRD +A EA ++G+VD V++ +
Sbjct: 155 AEQMLYTKRTLQERIAFHTGQTVEQIETDSDRDRWFTAEEAKEYGLVDHVVVRADQVPS 213
>gi|297195743|ref|ZP_06913141.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
pristinaespiralis ATCC 25486]
gi|297152927|gb|EFH32055.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 211
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 126/194 (64%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P + E+T+ G R+ D YS+L+ ERIVF+ ++D A + AQ L LE E P ++I L
Sbjct: 9 VLPELTERTSFGTRTLDPYSKLMSERIVFLGTAVDDTAANDVIAQFLHLEYEAPDQDICL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG ++A AIYDTMQ + ++T C+GQAAS LL+AG G R ALP ARI++
Sbjct: 69 YINSPGGSLSAMSAIYDTMQVVMCDVATTCLGQAASTAVALLTAGTPGKRMALPGARIVM 128
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QPS GQ SD+E HA ++++++ +L V++ G T E + L+RD I A+ A
Sbjct: 129 QQPSYEEPLRGQPSDLEIHAAELLRLREQLASTLVRHTGNTPERIAADLERDKIFDAAGA 188
Query: 196 CDWGVVDKVLMSRI 209
++G++D V+ SR
Sbjct: 189 REYGLIDHVVTSRK 202
>gi|329946414|ref|ZP_08293981.1| endopeptidase Clp [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527390|gb|EGF54388.1| endopeptidase Clp [Actinomyces sp. oral taxon 170 str. F0386]
Length = 212
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 96/181 (53%), Positives = 130/181 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQ+L L AE+P+++I LYINSPGG VTAGMAIYD
Sbjct: 29 IYNRLLKERIIWLGSEVRDDNANAICAQMLLLAAEDPERDIYLYINSPGGSVTAGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+++P ++T G AASMG LLSAG KG R+ P+AR+L+HQPSGG G A+DI +
Sbjct: 89 TMQYVQPDVATVATGLAASMGQHLLSAGAKGKRYLTPHARVLMHQPSGGAGGSATDIRIN 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+K+K+ L EI N G T EE+ DRDH SA EA ++G VD ++ S +I ++
Sbjct: 149 ADLIIKMKQELAEITAANTGHTVEEIIADSDRDHWFSAQEALEYGFVDHIVRSSREIGKQ 208
Query: 215 S 215
+
Sbjct: 209 N 209
>gi|261749127|ref|YP_003256812.1| ATP-dependent Clp protease proteolytic subunit 2 [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
gi|261497219|gb|ACX83669.1| ATP-dependent Clp protease proteolytic subunit 2 [Blattabacterium
sp. (Periplaneta americana) str. BPLAN]
Length = 234
Score = 191 bits (486), Expect = 4e-47, Method: Composition-based stats.
Identities = 87/199 (43%), Positives = 135/199 (67%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P +VE+ D++SRL+ +R++F+ IED +A ++ AQLLFL++ + K+I +
Sbjct: 33 MTPYIVEERKLNVAQMDVFSRLMMDRVIFLGTPIEDQVANIVQAQLLFLQSVDSLKDIQI 92
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQ ++P ++T C G AASM ++LL AG K R L ++R+++
Sbjct: 93 YINSPGGDVHAGLGIYDTMQIVEPDVATICTGMAASMAAVLLCAGVKNKRSGLKHSRVMI 152
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE ++I+K+KR L EI + G E++EK DRD+ M++ EA +
Sbjct: 153 HQPMGGTHGQASDIEITVREILKLKRELYEIIAIHSGSPIEKIEKDSDRDYWMTSEEAKE 212
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G++D+VL ++ + K
Sbjct: 213 YGMIDEVLKEKVSKKTFEK 231
>gi|297571128|ref|YP_003696902.1| endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595]
gi|296931475|gb|ADH92283.1| Endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595]
Length = 238
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 97/204 (47%), Positives = 141/204 (69%), Gaps = 1/204 (0%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQ 62
E K+ +E ++ P + ++ G D IY+RLLKERI+++ Q++D A +ICAQ
Sbjct: 14 EARHKRHNEGEYVTTTPQLAGGSSNGLGLGDSIYNRLLKERIIWLGDQVKDENANMICAQ 73
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL L AE+P+K+I LYINSPGG VTAGMAI+DTMQ+IKP ++T MG AASMG LL+AG
Sbjct: 74 LLLLAAEDPEKDIYLYINSPGGSVTAGMAIFDTMQYIKPDVATVGMGLAASMGQFLLTAG 133
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG R+ P+ R+L+HQP GG G A++I +A I+++K+ L+E+ K+ GK+ E++
Sbjct: 134 AKGKRYITPHTRVLMHQPLGGAGGTATEIRINADLILQMKQELSELNAKHTGKSVEQILV 193
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
DRDH +A EA ++G VD ++
Sbjct: 194 DSDRDHWFTAREALEYGFVDHIIE 217
>gi|119717699|ref|YP_924664.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Nocardioides
sp. JS614]
gi|119538360|gb|ABL82977.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
Length = 195
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 125/180 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLL+ERIVF+ ++ D A ICAQLL L AE+P+ +I L+INSPGG V AGMAIYD
Sbjct: 8 IYQRLLRERIVFLGSEVRDQNANAICAQLLLLSAEDPEADIFLHINSPGGSVDAGMAIYD 67
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM +I ++T MG AASMG LL AG KG R+ALP+ARI++HQPS G G ASDI+
Sbjct: 68 TMNYIPNDVATVGMGLAASMGQFLLCAGTKGKRYALPHARIMMHQPSSGMGGSASDIKIQ 127
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
AQ + IK+ L E+ ++ G+T E++E DRD +A +A ++G+VD+V+ S + +
Sbjct: 128 AQQSLHIKKVLLELIAEHTGQTVEQIEMDADRDRWFTADQAKEYGLVDQVIKSAREAADD 187
>gi|262201986|ref|YP_003273194.1| endopeptidase Clp [Gordonia bronchialis DSM 43247]
gi|262085333|gb|ACY21301.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247]
Length = 207
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 120/173 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P K+I+LYINSPGG VTAGMAI+D
Sbjct: 29 VFERLLRERIIFLGTQVDDDIANRLCAQILLLAAEDPHKDINLYINSPGGSVTAGMAIFD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ ++T+ MG AASMG LL+AG KG R ALP+ARI++HQPS G G A+DI
Sbjct: 89 TMQLATCDVATYAMGMAASMGQFLLAAGAKGKRHALPHARIMMHQPSAGIGGTAADIAIQ 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ K+ +N + + G+ E++E DRD +A EA ++G+VD V+
Sbjct: 149 AEQFAATKKEMNRLNAEFSGQPLEKIEADADRDKWFTAEEAKEYGLVDHVITR 201
>gi|315604696|ref|ZP_07879759.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 180 str. F0310]
gi|315313708|gb|EFU61762.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 180 str. F0310]
Length = 204
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 93/182 (51%), Positives = 125/182 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLLKERI+++ G++ D A ICAQLL L AE+P ++I LYINSPGG VTAGMAIYD
Sbjct: 21 VFQRLLKERIIWLGGEVRDENANTICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++KP + T MG AASM LL+AG G R+ P+ R+LLHQP GG G A++I +
Sbjct: 81 TMQYVKPDVVTVGMGMAASMAQFLLTAGAPGKRYITPHTRVLLHQPLGGAGGSATEIRIN 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+ +K+ L I GKT E+VE DRDH SA+EA ++G VD+V+ S +I +
Sbjct: 141 ADLILGMKKELASITAARTGKTVEQVEADGDRDHWFSAAEALEYGFVDRVINSPDEIGTR 200
Query: 215 SK 216
+
Sbjct: 201 GE 202
>gi|225021668|ref|ZP_03710860.1| hypothetical protein CORMATOL_01696 [Corynebacterium matruchotii
ATCC 33806]
gi|224945659|gb|EEG26868.1| hypothetical protein CORMATOL_01696 [Corynebacterium matruchotii
ATCC 33806]
Length = 191
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 86/172 (50%), Positives = 124/172 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 12 VYERLLRDRIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM + I+T+ MG AASMG LL+ G KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 72 TMTYSPCDIATYAMGLAASMGQFLLTGGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ + KR + E+ ++ G+T+E++ K DRD +A +A ++G+VD V+
Sbjct: 132 AEQFAQTKREMAELIAEHSGQTFEQITKDSDRDRWFTAQQALEYGLVDHVVT 183
>gi|296111257|ref|YP_003621639.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii
IMSNU 11154]
gi|295832789|gb|ADG40670.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii
IMSNU 11154]
Length = 201
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 100/199 (50%), Positives = 133/199 (66%), Gaps = 2/199 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RI+ V G++ED MAT I AQLLFLEA++P KEIS+YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG++I DTM FIK P++T MG AASMG+++ S+GEKG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLSITDTMNFIKAPVTTIVMGLAASMGTIIASSGEKGHRFMLPNAEYLIHQ 122
Query: 140 PSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ A+ + K + +LN+I K E + +RD+ MSA E +
Sbjct: 123 PMGGAVGGTQQTDMAIIAEQLTKTRAKLNKILADASDKDLETIAHDTERDNWMSAEETLE 182
Query: 198 WGVVDKVLMSRIDIEEKSK 216
+G +D +L + K
Sbjct: 183 YGFIDGILSKAGEKPVTKK 201
>gi|300788576|ref|YP_003768867.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
gi|299798090|gb|ADJ48465.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
Length = 217
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + ++P VE+T+ G + + Y++L +ER++F+ Q++D A + AQLL LE
Sbjct: 14 NIPQSRY--ILPSYVERTSYGVKESNPYNKLYEERVIFLGVQVDDASANDVMAQLLHLEH 71
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+P ++I +YINSPGG T+ MAIYDTMQF++P I T+C+GQAAS ++LLSAG G R+
Sbjct: 72 EDPDRDILIYINSPGGSFTSLMAIYDTMQFVRPDIQTYCLGQAASAAAVLLSAGTPGKRY 131
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+R+L+HQP+ GQ SD+E A +I +++R++ I + GK +++ K ++RD
Sbjct: 132 ALPNSRVLIHQPATEGTYGQVSDLEIQANEIQRVRRQMEVILAHHTGKDADQIRKDIERD 191
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA +G++D+VL R
Sbjct: 192 KILTAEEAKSYGIIDEVLPYRK 213
>gi|323359781|ref|YP_004226177.1| protease subunit of ATP-dependent Clp protease [Microbacterium
testaceum StLB037]
gi|323276152|dbj|BAJ76297.1| protease subunit of ATP-dependent Clp protease [Microbacterium
testaceum StLB037]
Length = 220
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F G A + ++P E+T G + D Y++L ++R++F+ Q++D A + A
Sbjct: 5 TFGGAAAHMPSSRY--VLPQFEERTAYGYKRQDPYNKLFEDRVIFLGVQVDDASADDVMA 62
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P ++I +YINSPGG TA AIYDTMQ++ P I T +GQAAS S+LL+A
Sbjct: 63 QLLVLESQDPDRDIIMYINSPGGSFTAMTAIYDTMQYVSPQIQTVVLGQAASAASVLLAA 122
Query: 122 GEKGMRFALPNARILLHQPSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
G G R ALPNARIL+HQP+ G GQASDIE A +I++++ L E ++ G+ +
Sbjct: 123 GAPGKRLALPNARILIHQPAMGEAGHGQASDIEIQAAEILRMRTWLEETMARHTGQDAAK 182
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V K +DRD I+S+ EA ++G+VD+VL +R
Sbjct: 183 VNKDIDRDKILSSQEAMEYGIVDQVLTTRK 212
>gi|294629346|ref|ZP_06707906.1| Clp protease [Streptomyces sp. e14]
gi|292832679|gb|EFF91028.1| Clp protease [Streptomyces sp. e14]
Length = 219
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 96/192 (50%), Positives = 132/192 (68%), Gaps = 2/192 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L A +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAA-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IK + T MG AASMG LLSAG G RFALPNA I
Sbjct: 76 YLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ K+R+ E+ ++ G+T+E++ + DRD A EA
Sbjct: 136 LIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTAQHTGQTFEQITRDSDRDRWFDAYEA 195
Query: 196 CDWGVVDKVLMS 207
++G++D V+ S
Sbjct: 196 KEYGLIDDVITS 207
>gi|152967459|ref|YP_001363243.1| endopeptidase Clp [Kineococcus radiotolerans SRS30216]
gi|151361976|gb|ABS04979.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216]
Length = 235
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 136/194 (70%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G + D Y++L ++RIVF+ Q++D A I AQL+ LE+++ +++I +
Sbjct: 36 VLPQFEERTSYGMKRSDPYTKLFEDRIVFLGVQVDDASADDIIAQLIVLESQDTERDIIM 95
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+I+P I T+CMGQAAS ++LL AG G RFALPN+RIL+
Sbjct: 96 YINSPGGSFTALTAIYDTMQYIRPDIQTYCMGQAASAAAVLLGAGAPGKRFALPNSRILI 155
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ G GQASD+E A +I++++ L + +T ++V + ++RD ++A EA
Sbjct: 156 HQPAMAGGDYGQASDLEIQANEILRMRSWLESTLAFHSHRTADQVREDIERDKFLTAREA 215
Query: 196 CDWGVVDKVLMSRI 209
++G++D+VL SR
Sbjct: 216 VEYGLIDEVLTSRK 229
>gi|258648499|ref|ZP_05735968.1| Clp protease [Prevotella tannerae ATCC 51259]
gi|260851264|gb|EEX71133.1| Clp protease [Prevotella tannerae ATCC 51259]
Length = 235
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/190 (46%), Positives = 132/190 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 46 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSADPGKDISI 105
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG++G R L ++R+++
Sbjct: 106 YINSPGGSVYAGLGIYDTMQFIGSDVATICTGMAASMAAVLLVAGKEGKRSGLKHSRVMI 165
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +E+V + DRD+ M+A EA +
Sbjct: 166 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFEKVWQDSDRDYWMTAEEAKE 225
Query: 198 WGVVDKVLMS 207
+G++DKVL
Sbjct: 226 YGMIDKVLTK 235
>gi|154487068|ref|ZP_02028475.1| hypothetical protein BIFADO_00906 [Bifidobacterium adolescentis
L2-32]
gi|154084931|gb|EDN83976.1| hypothetical protein BIFADO_00906 [Bifidobacterium adolescentis
L2-32]
Length = 233
Score = 191 bits (486), Expect = 5e-47, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++ + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQNRY--VLPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGRDIEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A EA ++G+VD+VL R
Sbjct: 214 LTAQEAKEYGIVDEVLEHRS 233
>gi|330996067|ref|ZP_08319961.1| endopeptidase Clp [Paraprevotella xylaniphila YIT 11841]
gi|329574064|gb|EGG55642.1| endopeptidase Clp [Paraprevotella xylaniphila YIT 11841]
Length = 231
Score = 191 bits (485), Expect = 5e-47, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI P++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSPVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I ++ +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIAEHSHTDFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSRI 209
+G++D VL+ +
Sbjct: 210 YGMIDSVLIRKK 221
>gi|326800322|ref|YP_004318141.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
sp. 21]
gi|326551086|gb|ADZ79471.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
sp. 21]
Length = 231
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 141/202 (69%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + + L P ++E+ D++SRL+ +RI+F+ + D +A +I AQLLFL++
Sbjct: 29 RVEQQMPVSLTPYIIEERQLNVAQMDVFSRLMMDRIIFLGDAVTDQVANIIQAQLLFLQS 88
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+ ++I +YINSPGG V AG+ IYDTMQ+I P ++T C G AASMG++LL AG KG R
Sbjct: 89 ADAHRDIQIYINSPGGSVYAGLGIYDTMQYISPDVATICTGMAASMGAVLLVAGAKGKRA 148
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
AL ++R+++HQPSGG G A+D+E + ++++K+K+ L +I + G++Y+ VEK DRD
Sbjct: 149 ALKHSRVMIHQPSGGAQGVAADMEINLREMLKLKKELYQIIADHSGQSYDWVEKASDRDF 208
Query: 189 IMSASEACDWGVVDKVLMSRID 210
M++ EA + G++D+VL+ + D
Sbjct: 209 WMTSGEAKENGMIDEVLLGKKD 230
>gi|163753152|ref|ZP_02160276.1| ATP-dependent Clp protease proteolytic subunit 2 [Kordia algicida
OT-1]
gi|161326884|gb|EDP98209.1| ATP-dependent Clp protease proteolytic subunit 2 [Kordia algicida
OT-1]
Length = 230
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 87/203 (42%), Positives = 137/203 (67%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ +G+ P ++E+ D++SRL+ +RI+F+ I+D +A ++ AQLL
Sbjct: 27 SRMSPSAFSNPVGMTPYIIEERQMNVAQMDVFSRLMMDRIIFLGTGIDDQVANIVQAQLL 86
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
F+E+ + K+I +YINSPGG V AG+ IYDTMQFIKP ++T C G AASMG++LL AG+
Sbjct: 87 FMESVDSSKDIQIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGMAASMGAVLLCAGQA 146
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R L ++R+++HQP GG GQASDIE A++I+ +K L +I K+ G+ YE++ +
Sbjct: 147 GKRSGLTHSRVMIHQPLGGAQGQASDIEITAREILILKEELYKIISKHSGQPYEKIYEDS 206
Query: 185 DRDHIMSASEACDWGVVDKVLMS 207
DRD+ M A A ++G++D++L+
Sbjct: 207 DRDYWMKADRAKEYGMIDEILVR 229
>gi|67460459|sp|Q5Z063|CLPP2_NOCFA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|54014808|dbj|BAD56178.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
Length = 203
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 92/173 (53%), Positives = 121/173 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 22 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + I T MG AASMG LL+AG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 82 TMQFAECDIRTVGMGLAASMGQFLLTAGTKGKRYALPHARIMMHQPSAGIGGSAADIAIM 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR LNE+ + GK+ E+V DRD +A EA ++G +D V+
Sbjct: 142 AEQFAHTKRELNELQALHTGKSVEQVTADADRDRWFTAQEALEYGFIDHVISH 194
>gi|256832187|ref|YP_003160914.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603]
gi|256685718|gb|ACV08611.1| Endopeptidase Clp [Jonesia denitrificans DSM 20603]
Length = 207
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 128/190 (67%), Gaps = 1/190 (0%)
Query: 27 NRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
G D IY+RLLKERI+++ ++ D A ICAQ+L L AE+P K+I LYINSPGG
Sbjct: 13 GNGFALNDSIYNRLLKERIIWLGSEVRDENANAICAQMLLLAAEDPDKDIYLYINSPGGS 72
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+TAGMAIYDTMQFIKP + T MG AASMG LLS+G++G RFA P+AR+++HQPSGG
Sbjct: 73 ITAGMAIYDTMQFIKPDVVTVAMGMAASMGQFLLSSGKRGKRFATPHARVMMHQPSGGIG 132
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G A+DI +AQ I+ +K+ L E+ + GKT E++ DRD +A EA ++G +D ++
Sbjct: 133 GTATDIRINAQLILHMKKVLAELIAEQTGKTVEQINTDSDRDRWFTAQEALEYGFIDHIV 192
Query: 206 MSRIDIEEKS 215
I
Sbjct: 193 EHAGSISGSK 202
>gi|297194375|ref|ZP_06911773.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720967|gb|EDY64875.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 222
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 90/195 (46%), Positives = 135/195 (69%), Gaps = 1/195 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 23 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALP+AR+L+
Sbjct: 83 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPHARVLI 142
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A +I++++ +L E+ K+ E++ ++RD I++A A
Sbjct: 143 HQPSSQTGREQLSDLEIAANEILRMREQLEEMLAKHSTTPIEKIRDDIERDKILTADGAL 202
Query: 197 DWGVVDKVLMSRIDI 211
+G+VD+++ +R
Sbjct: 203 AYGLVDQIVSTRKST 217
>gi|116617520|ref|YP_817891.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|227432636|ref|ZP_03914612.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|116096367|gb|ABJ61518.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|227351606|gb|EEJ41856.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 200
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 98/198 (49%), Positives = 134/198 (67%), Gaps = 2/198 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G +YD+ SRLLK+RI+ V G+IED MAT I AQLLFLEA++P KEIS+YI
Sbjct: 3 PGVIEQTANGRENYDLPSRLLKDRIILVQGEIEDSMATSIVAQLLFLEAQDPTKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG++I DTM FIK P++T MG AASMG+++ ++GEKG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLSITDTMNFIKAPVTTIVMGLAASMGTIIAASGEKGHRFMLPNAEYLIHQ 122
Query: 140 PSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ A+ + K + +LN+I GK + + + +RD+ MSA E +
Sbjct: 123 PMGGAAGGTQQTDMAIIAEQLTKTRAKLNKILADASGKDLKVIGRDTERDNWMSAEETLE 182
Query: 198 WGVVDKVLMSRIDIEEKS 215
+G +D +L +
Sbjct: 183 YGFIDGILTKSGEKPATK 200
>gi|183601399|ref|ZP_02962769.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis HN019]
gi|219683456|ref|YP_002469839.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis AD011]
gi|241191101|ref|YP_002968495.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196507|ref|YP_002970062.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|63055004|gb|AAY29040.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium animalis subsp. animalis ATCC 25527]
gi|183219005|gb|EDT89646.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis HN019]
gi|219621106|gb|ACL29263.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium animalis subsp. lactis AD011]
gi|240249493|gb|ACS46433.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240251061|gb|ACS48000.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|289178845|gb|ADC86091.1| ClpP [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794090|gb|ADG33625.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
animalis subsp. lactis V9]
Length = 233
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 134/193 (69%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP E+T G ++ + Y+RL +RI+F+ Q++D A I AQLL LE+ +P +++ +
Sbjct: 41 VVPEFTERTPYGMKTQNPYTRLFDDRIIFLGVQVDDTSADDIMAQLLVLESMDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS +++L+AG KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAIILAAGTKGKRLMLPNARVLI 160
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A+DIE A+++++++ L K+ G++ E + + ++ D ++ASEA
Sbjct: 161 HQPAIDQGFGKATDIEIQAKEMMRMREWLENTLAKHTGQSRERISRDIEVDTFLTASEAK 220
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 221 EYGIVDEVLEHRS 233
>gi|312200165|ref|YP_004020226.1| endopeptidase Clp [Frankia sp. EuI1c]
gi|311231501|gb|ADP84356.1| Endopeptidase Clp [Frankia sp. EuI1c]
Length = 200
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 87/181 (48%), Positives = 127/181 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ ++D +A +CAQLL L AE+P+++I LYINSPGGVVTAGMAIYD
Sbjct: 14 VFQRLLRERIIFLGSAVDDEVANRVCAQLLLLGAEDPRRDIFLYINSPGGVVTAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++ ++T +G +ASMG LL AG G R+ALP+ARI++HQPSGG G ASDI
Sbjct: 74 TMQYLDNDVATVALGLSASMGQFLLCAGTPGKRYALPHARIMMHQPSGGIGGTASDIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + KR + E + G+T E++++ DRD +A EA D+G++D+V+ S + +
Sbjct: 134 VEQTLHTKRVIQERTAFHTGQTVEQIDRDSDRDRWFTADEARDYGLIDEVVASARAVPAE 193
Query: 215 S 215
S
Sbjct: 194 S 194
>gi|116490635|ref|YP_810179.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oenococcus
oeni PSU-1]
gi|290890048|ref|ZP_06553131.1| hypothetical protein AWRIB429_0521 [Oenococcus oeni AWRIB429]
gi|116091360|gb|ABJ56514.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oenococcus
oeni PSU-1]
gi|290480239|gb|EFD88880.1| hypothetical protein AWRIB429_0521 [Oenococcus oeni AWRIB429]
Length = 198
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 99/196 (50%), Positives = 136/196 (69%), Gaps = 2/196 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RI+ V G++ED MAT I AQLLFL+A++P K+I +YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLDAQDPNKDIYMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI DTM FI+ + T MG AASM +++ S+G KG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGMAIVDTMNFIRSDVQTIVMGMAASMATIIASSGTKGKRFMLPNAEYLIHQ 122
Query: 140 PS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P G Q +D+ A ++K ++RLN I +N GK E++EK +RDH M + E D
Sbjct: 123 PMGGAGAGTQQTDMSIIADQLLKTRKRLNNILKENSGKPIEKIEKDTERDHWMDSKETLD 182
Query: 198 WGVVDKVLMSRIDIEE 213
+G++DK+L+++ +
Sbjct: 183 YGLIDKILINKEKNKS 198
>gi|161598446|ref|YP_117542.2| ATP-dependent Clp protease proteolytic subunit [Nocardia farcinica
IFM 10152]
Length = 195
Score = 191 bits (485), Expect = 6e-47, Method: Composition-based stats.
Identities = 92/173 (53%), Positives = 121/173 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 14 VYERLLRERIIFLGTQVDDDIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF + I T MG AASMG LL+AG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 74 TMQFAECDIRTVGMGLAASMGQFLLTAGTKGKRYALPHARIMMHQPSAGIGGSAADIAIM 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ KR LNE+ + GK+ E+V DRD +A EA ++G +D V+
Sbjct: 134 AEQFAHTKRELNELQALHTGKSVEQVTADADRDRWFTAQEALEYGFIDHVISH 186
>gi|212716951|ref|ZP_03325079.1| hypothetical protein BIFCAT_01895 [Bifidobacterium catenulatum DSM
16992]
gi|212660236|gb|EEB20811.1| hypothetical protein BIFCAT_01895 [Bifidobacterium catenulatum DSM
16992]
Length = 233
Score = 191 bits (485), Expect = 7e-47, Method: Composition-based stats.
Identities = 84/199 (42%), Positives = 137/199 (68%), Gaps = 3/199 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++ + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQNRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGRDVEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSR 208
++A EA ++G+VD+VL R
Sbjct: 214 LTAPEAKEYGIVDEVLEHR 232
>gi|298346553|ref|YP_003719240.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
gi|304389729|ref|ZP_07371688.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|315655110|ref|ZP_07908012.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
ATCC 51333]
gi|315657032|ref|ZP_07909917.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
gi|298236614|gb|ADI67746.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
gi|304326905|gb|EFL94144.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|315490591|gb|EFU80214.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
ATCC 51333]
gi|315492424|gb|EFU82030.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
Length = 202
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 93/182 (51%), Positives = 124/182 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLLKERI+++ ++ A ICAQ+L L AE+P +I LYINSPGG VTAGMAIYD
Sbjct: 19 IYKRLLKERIIWLGDEVSQENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYD 78
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++KP + T MG AASMG LL+AG KG RFA P+ARIL+HQP GG G AS++ +
Sbjct: 79 TMQYVKPDVVTVAMGMAASMGQFLLTAGTKGKRFATPHARILMHQPLGGVQGTASEVRIN 138
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+ +K L +I + G T EE+ + DRDH +A EA ++G +D V+ S ++
Sbjct: 139 ADLILAMKHELAQITAERTGHTLEEITRDADRDHWFTAQEALEYGFIDAVVESAAAVQSS 198
Query: 215 SK 216
+K
Sbjct: 199 NK 200
>gi|297199670|ref|ZP_06917067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
gi|197713960|gb|EDY57994.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
Length = 226
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP + T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQFVKPDVQTVCMGQAASAAAILLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L ++ K+ E++ + ++RD I++A +A
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRAQLEDLLAKHSTTPIEKIREDIERDKILTADDAL 206
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 207 AYGLIDQIISTRK 219
>gi|311743054|ref|ZP_07716862.1| ATP-dependent Clp protease proteolytic subunit [Aeromicrobium
marinum DSM 15272]
gi|311313734|gb|EFQ83643.1| ATP-dependent Clp protease proteolytic subunit [Aeromicrobium
marinum DSM 15272]
Length = 200
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 132/194 (68%), Gaps = 1/194 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P E+T+ G R D Y++L ++RI+F+ I D +A + AQLL L+ P ++
Sbjct: 1 MSYYIPQWEERTSYGFRRIDPYAKLFEDRIIFLGTPISDDVANAVIAQLLCLQVMEPDRD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG TA AIYDTM+++KP + TFC+GQAAS ++LL AG G RFALPNAR
Sbjct: 61 ISIYINSPGGSFTAMTAIYDTMRYLKPDVQTFCLGQAASAAAVLLGAGTPGKRFALPNAR 120
Query: 135 ILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQP GQ SD+E A +I++++ + ++ + G++ E+V + +DRD I++A
Sbjct: 121 ILIHQPYTEGTGGQISDLEIQANEIMRMRSLMEQMISTSTGRSPEDVSRDVDRDKILTAQ 180
Query: 194 EACDWGVVDKVLMS 207
+A ++G++D+VL +
Sbjct: 181 QALEYGLIDQVLDT 194
>gi|300741666|ref|ZP_07071687.1| Clp protease [Rothia dentocariosa M567]
gi|300380851|gb|EFJ77413.1| Clp protease [Rothia dentocariosa M567]
Length = 223
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 99/208 (47%), Positives = 148/208 (71%), Gaps = 4/208 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G A + + + ++P E+T G + D Y++L ++RI+F+ Q++D A + AQL
Sbjct: 3 HGSAPQVPSNRY--VLPSFEERTPYGYKRQDPYAKLFEDRIIFLGTQVDDSSADDVMAQL 60
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LEA++P ++I+LYINSPGG TA AIYDTMQFI+P I T C+GQAAS ++LL+AG
Sbjct: 61 LVLEAQDPDRDITLYINSPGGSFTAMTAIYDTMQFIRPEIQTVCLGQAASAAAVLLAAGT 120
Query: 124 KGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP SG GQASD+E HA ++++++ + + GKTYEEV+
Sbjct: 121 PGKRLALPNARVLIHQPALSGQQRGQASDLEIHANEVMRMREWTAQTLALHSGKTYEEVD 180
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
++++RD+I++A+EA ++G+VDKVL SR
Sbjct: 181 RSIERDNILTAAEAQEYGLVDKVLESRK 208
>gi|296118749|ref|ZP_06837325.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
gi|295968238|gb|EFG81487.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
Length = 199
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 90/172 (52%), Positives = 122/172 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 20 VYERLLSERIIFLGTQVDDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ I T+ MG AASMG LLS G KG RFALP+ARI++HQPS G G ASDI
Sbjct: 80 TMKYSPCDIRTYGMGLAASMGQFLLSGGTKGKRFALPHARIMMHQPSAGVGGTASDIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ KR + E+ ++ G+T+E++ K DRD +A +A ++G+VD V+
Sbjct: 140 AEQFAATKREMAELIAEHTGQTFEQITKDSDRDRWFTADQAKEYGIVDHVID 191
>gi|302832604|ref|XP_002947866.1| hypothetical protein VOLCADRAFT_103638 [Volvox carteri f.
nagariensis]
gi|300266668|gb|EFJ50854.1| hypothetical protein VOLCADRAFT_103638 [Volvox carteri f.
nagariensis]
Length = 347
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 125/186 (67%), Gaps = 2/186 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V +T E D + LL++RIVF+ G++ED A + +QLL L++++P K+I ++I
Sbjct: 58 PIVAPRTA--EMQGDPFGLLLRQRIVFLGGEVEDFGADALISQLLLLDSQDPTKDIKMFI 115
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGM IYD M + + T+C G AASMG+ LL AG++G R ++PN+RI++HQ
Sbjct: 116 NSPGGSVTAGMGIYDAMMLCRADVHTYCFGLAASMGAFLLGAGKRGKRHSMPNSRIMIHQ 175
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG SGQA DIE A++I+ K LN I G+ ++E+ DRD MS EA ++G
Sbjct: 176 PLGGASGQAVDIEIQAKEIMYHKANLNRIMADYTGQPLAKIEEDTDRDRYMSPLEAKEYG 235
Query: 200 VVDKVL 205
++D ++
Sbjct: 236 IIDHIV 241
>gi|313204335|ref|YP_004042992.1| ATP-dependent clp protease proteolytic subunit clpp [Paludibacter
propionicigenes WB4]
gi|312443651|gb|ADQ80007.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paludibacter
propionicigenes WB4]
Length = 223
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 89/211 (42%), Positives = 141/211 (66%), Gaps = 1/211 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLV-PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
+ G A D+ + P ++E+ D++SRL+ +RI+F+ Q++D+ A +I
Sbjct: 12 LGMNGLALDKYADITSNYISPSILEERQLNVTQMDVFSRLMMDRIIFLGTQVDDYTANVI 71
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL+L++ +P K+IS+Y+N+PGG V AG+ IYDTMQFI ++T C G AASMG++LL
Sbjct: 72 QAQLLYLDSADPGKDISIYLNTPGGSVYAGLGIYDTMQFISSDVATICTGMAASMGAVLL 131
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG +G R AL ++R+++HQP GG GQASDIE A++I K+K+ L I + ++
Sbjct: 132 VAGAQGKRSALKHSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSNNPFDR 191
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+EK DRD+ M+++EA ++G++DKVL +
Sbjct: 192 IEKDSDRDYWMTSTEALEYGMIDKVLFNEKK 222
>gi|294809722|ref|ZP_06768409.1| Clp protease [Bacteroides xylanisolvens SD CC 1b]
gi|294443056|gb|EFG11836.1| Clp protease [Bacteroides xylanisolvens SD CC 1b]
Length = 207
Score = 190 bits (484), Expect = 7e-47, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 134/191 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ +P K+IS+
Sbjct: 17 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVDPGKDISI 76
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R ALP++R+++
Sbjct: 77 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALPHSRVMI 136
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 137 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 196
Query: 198 WGVVDKVLMSR 208
+G++D+VL+ +
Sbjct: 197 YGMIDEVLIKK 207
>gi|225352780|ref|ZP_03743803.1| hypothetical protein BIFPSEUDO_04410 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156387|gb|EEG69956.1| hypothetical protein BIFPSEUDO_04410 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 233
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 84/200 (42%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++ + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQNRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E++ K ++ D
Sbjct: 154 PNARVLIHQPAIDQGFGKATEIEIQAKEMLRMREWLENTLAKHTGRDVEKIRKDIEVDTF 213
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A EA ++G+VD+VL R
Sbjct: 214 LTAPEAKEYGIVDEVLEHRS 233
>gi|168004996|ref|XP_001755197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693790|gb|EDQ80141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 251
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 127/178 (71%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + ++L ++RI+ G ++D MA LI AQLL+L+A +P ++I +Y+NSPGG VTAG
Sbjct: 52 ERFQSVITQLFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPNRDIVMYVNSPGGSVTAG 111
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+RI++HQP GG GQ +
Sbjct: 112 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQT 171
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+ K LN + G+ YE++ + DRD MSA EA ++G++D V+ +
Sbjct: 172 DIEIQANEILHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAQEYGLIDAVISN 229
>gi|28493447|ref|NP_787608.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei
str. Twist]
gi|28572440|ref|NP_789220.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei
TW08/27]
gi|67460538|sp|Q83G49|CLPP1_TROWT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460539|sp|Q83I18|CLPP2_TROW8 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|28410571|emb|CAD66958.1| ATP dependent Clp protease proteolytic subunit 2 [Tropheryma
whipplei TW08/27]
gi|28476488|gb|AAO44577.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei
str. Twist]
Length = 207
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 89/202 (44%), Positives = 138/202 (68%), Gaps = 4/202 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ ++P + E+T G + D Y++L ++RIVF+ QI+D A + AQLL LE +
Sbjct: 2 YPNSRY--ILPSLDERTAYGYKQVDPYTKLFEDRIVFLGVQIDDASADDVMAQLLVLEGQ 59
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ +++I +YINSPGG TA AIYDTMQ+I+P I T C+GQAAS +++LSAG G R A
Sbjct: 60 DAERDIIMYINSPGGSFTAMTAIYDTMQYIRPQIQTVCLGQAASAAAVILSAGTPGKRLA 119
Query: 130 LPNARILLHQPSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPNARIL+HQP GQASDIE A++I++++ L + ++ K+ ++V K +DRD
Sbjct: 120 LPNARILIHQPVVASSGYGQASDIEIQAREIMRMREWLEKTLAQHSNKSVKQVSKDIDRD 179
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I+S+ +A ++G++D++L+SR
Sbjct: 180 KILSSEQALEYGLIDQILVSRK 201
>gi|260591256|ref|ZP_05856714.1| Clp protease [Prevotella veroralis F0319]
gi|260537121|gb|EEX19738.1| Clp protease [Prevotella veroralis F0319]
Length = 237
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ ERI+F+ Q++D+ A I AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMERIIFLGTQVDDYTANTIQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATLCTGMAASMAAVLLVAGKEGKRSALKHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K+ L I + +++E+V DR++ M+A EA
Sbjct: 150 HQPLGGVQGQASDIEIEAKEIMKFKKELYTIISDHSHQSFEKVWNDSDRNYWMNAEEAKA 209
Query: 198 WGVVDKVLMSRI 209
+G++D VL+ +
Sbjct: 210 YGMIDDVLVKKP 221
>gi|297160513|gb|ADI10225.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
bingchenggensis BCW-1]
Length = 223
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 1/200 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ +VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +
Sbjct: 18 PQAEARYVVPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMD 77
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++IS+YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LLSAG G R AL
Sbjct: 78 PDRDISIYINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLSAGTPGKRMAL 137
Query: 131 PNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP GQ SD+E A +I++++ +L E+ K+ E++ ++RD I
Sbjct: 138 PNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPIEKIRDDIERDKI 197
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A E+ +G++D+++ +R
Sbjct: 198 LTAEESLSYGLIDQIVSTRK 217
>gi|29831991|ref|NP_826625.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
avermitilis MA-4680]
gi|67460533|sp|Q82CA5|CLPP4_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|29609109|dbj|BAC73160.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces avermitilis MA-4680]
Length = 226
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L ++ K+ E++ + ++RD I++A +A
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRSQLEDMLAKHSTTPIEKIREDIERDKILTAEDAL 206
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 207 AYGLIDQIISTRK 219
>gi|168018159|ref|XP_001761614.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162687298|gb|EDQ73682.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 303
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 127/178 (71%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + ++L ++RI+ G ++D MA LI AQLL+L+A +P ++I +Y+NSPGG VTAG
Sbjct: 104 ERFQSVITQLFQQRIIRCGGAVDDDMANLIVAQLLYLDAADPDRDIVMYVNSPGGSVTAG 163
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+RI++HQP GG GQ +
Sbjct: 164 MAIFDTMRHIRPDVSTVCVGLAASMGAFLLSGGTKGKRYSLPNSRIMIHQPLGGAQGQQT 223
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+ K LN + G+ YE++ + DRD MSA EA ++G++D V+ +
Sbjct: 224 DIEIQANEILHHKANLNGYLAYHTGQPYEKIVQDTDRDFFMSAKEAQEYGLIDAVISN 281
>gi|307566218|ref|ZP_07628666.1| endopeptidase Clp [Prevotella amnii CRIS 21A-A]
gi|307345076|gb|EFN90465.1| endopeptidase Clp [Prevotella amnii CRIS 21A-A]
Length = 221
Score = 190 bits (484), Expect = 8e-47, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDSGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASMG++LL AG++G R LP++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMGAVLLVAGQEGKRSVLPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + + +E+V DR++ M+A EA
Sbjct: 150 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISTHSHQPFEKVWNDSDRNYWMTAEEAKA 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VL+ +
Sbjct: 210 YGMIDEVLVRKK 221
>gi|260906247|ref|ZP_05914569.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium
linens BL2]
Length = 210
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 88/205 (42%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + ++P E+T G + D Y++L +R++F+ Q++D A + AQLL LE+
Sbjct: 8 NMPQSRY--VMPQFEERTPYGFKRQDPYTKLFDDRVIFLGVQVDDTSADDVMAQLLVLES 65
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
++P ++I+LYINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG G R
Sbjct: 66 QDPDRDITLYINSPGGSFTAMTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAAGTPGKRL 125
Query: 129 ALPNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
ALPNAR+L+HQP+ GQASDIE A ++ ++++ L + K+ E+V ++R
Sbjct: 126 ALPNARVLIHQPAMEGQGQGQASDIEIQAAEVFRMRQWLETTLSDHSNKSPEQVSNDIER 185
Query: 187 DHIMSASEACDWGVVDKVLMSRIDI 211
D ++A +A D+G+VD+VL SR +
Sbjct: 186 DLFLTAEQAKDYGLVDQVLTSRKAV 210
>gi|269955919|ref|YP_003325708.1| endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
gi|269304600|gb|ACZ30150.1| Endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
Length = 214
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 90/173 (52%), Positives = 126/173 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQ++ L AE+P K+I LYINSPGG +TAGMAIYD
Sbjct: 27 IYNRLLKERIIWLGSEVRDENANAICAQMMLLAAEDPDKDIWLYINSPGGSITAGMAIYD 86
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI+P ++T MG AASMG LLS+G KG R+A P+AR+++HQPSGG G A+D+ +
Sbjct: 87 TMQFIQPDVATVAMGMAASMGQFLLSSGAKGKRYATPHARVMMHQPSGGIGGTATDVRIN 146
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ I+ +K L E+ + GK E++ K DRD +A+EA ++G +D V+ +
Sbjct: 147 AQLIMHMKTVLAELTAEQTGKPLEQILKDNDRDSWFTATEALEYGFIDHVVEN 199
>gi|269219684|ref|ZP_06163538.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210926|gb|EEZ77266.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332]
Length = 225
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 131/209 (62%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
F G A + ++P E+T G + D Y++L ++RI+F+ Q++D A I A
Sbjct: 14 HFSGLAPAMPSARY--VLPNFEERTPYGYKRQDPYAKLFEDRIIFLGVQVDDASADDIMA 71
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+A
Sbjct: 72 QLLVLESQDPDSPITMYINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLAA 131
Query: 122 GEKGMRFALPNARIL-LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R ALPNAR+L G GQASDI A ++ ++ L + + GK +E+
Sbjct: 132 GSPGRRLALPNARVLIHEPAMEGMQGQASDIAIVADELERMNDWLCDTLSHHSGKPADEI 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ + RD I++A++A ++G+VD+VL SR
Sbjct: 192 KNDIKRDKILTANDAKEYGLVDQVLTSRK 220
>gi|227548722|ref|ZP_03978771.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
gi|227079189|gb|EEI17152.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
lipophiloflavum DSM 44291]
Length = 206
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 140/210 (66%), Gaps = 8/210 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
M+F+ + ++P +E+T+ G + D Y +L +ERIVF+ Q++D A +
Sbjct: 1 MNFQMPTSRY-------VLPQFLEETSFGTKQIDPYGKLFEERIVFLGTQVDDTSANDVM 53
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+++P ++I++YINSPGG TA MAIYDTMQ+++P + T C+GQAAS +++L+
Sbjct: 54 AQLLVLESQDPDRDITMYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVILA 113
Query: 121 AGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R ALPN+R+L+HQP+ GQ SD+E A +I +++R + ++ G++ E+
Sbjct: 114 AGAPGKRAALPNSRVLIHQPATQGTQGQVSDLEIQAAEIERMRRLMESTLAEHTGRSAEQ 173
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ K DRD I++A EA ++G++D+V R
Sbjct: 174 IRKDTDRDKILTADEAVEYGIIDQVFDYRK 203
>gi|256375294|ref|YP_003098954.1| endopeptidase Clp [Actinosynnema mirum DSM 43827]
gi|255919597|gb|ACU35108.1| Endopeptidase Clp [Actinosynnema mirum DSM 43827]
Length = 209
Score = 190 bits (483), Expect = 9e-47, Method: Composition-based stats.
Identities = 86/200 (43%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P VE+T+ G + + Y++L +ERI+F+ Q++D A + AQLL LE+E+
Sbjct: 7 PQSRY--VLPSFVERTSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESED 64
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I +YINSPGG T+ MAIYDTMQF++P I T+C+GQA+S ++LL+AG G R AL
Sbjct: 65 PDRDILMYINSPGGSFTSLMAIYDTMQFVRPDIQTYCLGQASSAAAVLLAAGTPGKRHAL 124
Query: 131 PNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ GQ SD+E + +I +++R L + ++ E+V ++RD I
Sbjct: 125 PNARVLIHQPATEGVYGQVSDLEIQSNEIQRVRRLLESTLAHHTNRSPEQVRADIERDKI 184
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A EA ++G+VD VL R
Sbjct: 185 LTAEEAKEYGIVDTVLPYRK 204
>gi|225010439|ref|ZP_03700910.1| Endopeptidase Clp [Flavobacteria bacterium MS024-3C]
gi|225005268|gb|EEG43219.1| Endopeptidase Clp [Flavobacteria bacterium MS024-3C]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/195 (45%), Positives = 134/195 (68%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+G+ P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 32 VGMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADAAKDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASM ++LL AGEKG R L ++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAGEKGKRSGLTHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G GQASDIE A++++KIK L I + G+T+++V + DRD+ M A +A
Sbjct: 152 MIHQPLSGAQGQASDIEIAAKEVLKIKDELYTIISNHSGQTFDKVYQDSDRDYWMKAEQA 211
Query: 196 CDWGVVDKVLMSRID 210
+G++D++L
Sbjct: 212 KSYGMIDEILSRDKK 226
>gi|320094139|ref|ZP_08025952.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319978941|gb|EFW10471.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 214
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 91/208 (43%), Positives = 140/208 (67%), Gaps = 3/208 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
FE A++ + + ++P E+T G R + Y++L ++RIVF+ Q++D A + AQ
Sbjct: 7 FEAAARQMPQARY--VLPDFEERTAYGFRRQNPYTKLFEDRIVFLGVQVDDASADDVMAQ 64
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG
Sbjct: 65 LLVLESQDPDSLITMYINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLAAG 124
Query: 123 EKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ GQASDI+ A +I +++ L + ++ G E+V
Sbjct: 125 SPGKRLALPNARVLIHQPAMEGMQGQASDIQIVADEIDRMRAWLEDTLAEHSGTPVEQVR 184
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ ++RD I++A +A ++G++D+VL SR
Sbjct: 185 RDIERDKILTAPQAAEYGLIDQVLESRK 212
>gi|29349250|ref|NP_812753.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
thetaiotaomicron VPI-5482]
gi|160882386|ref|ZP_02063389.1| hypothetical protein BACOVA_00335 [Bacteroides ovatus ATCC 8483]
gi|237712737|ref|ZP_04543218.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
D1]
gi|237719059|ref|ZP_04549540.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
2_2_4]
gi|253573097|ref|ZP_04850488.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|255690574|ref|ZP_05414249.1| Clp protease [Bacteroides finegoldii DSM 17565]
gi|260172007|ref|ZP_05758419.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides sp. D2]
gi|262408126|ref|ZP_06084673.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacteroides
sp. 2_1_22]
gi|293369498|ref|ZP_06616077.1| Clp protease [Bacteroides ovatus SD CMC 3f]
gi|294645126|ref|ZP_06722851.1| Clp protease [Bacteroides ovatus SD CC 2a]
gi|298384791|ref|ZP_06994350.1| Clp protease [Bacteroides sp. 1_1_14]
gi|298480169|ref|ZP_06998367.1| Clp protease [Bacteroides sp. D22]
gi|299148142|ref|ZP_07041204.1| Clp protease [Bacteroides sp. 3_1_23]
gi|315920320|ref|ZP_07916560.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides sp. D2]
gi|67460394|sp|Q8A129|CLPP_BACTN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29341158|gb|AAO78947.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides
thetaiotaomicron VPI-5482]
gi|156112199|gb|EDO13944.1| hypothetical protein BACOVA_00335 [Bacteroides ovatus ATCC 8483]
gi|229447214|gb|EEO53005.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
D1]
gi|229451438|gb|EEO57229.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
2_2_4]
gi|251837320|gb|EES65420.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|260624036|gb|EEX46907.1| Clp protease [Bacteroides finegoldii DSM 17565]
gi|262353678|gb|EEZ02771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacteroides
sp. 2_1_22]
gi|292635383|gb|EFF53896.1| Clp protease [Bacteroides ovatus SD CMC 3f]
gi|292639550|gb|EFF57843.1| Clp protease [Bacteroides ovatus SD CC 2a]
gi|295088060|emb|CBK69583.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacteroides
xylanisolvens XB1A]
gi|298261935|gb|EFI04800.1| Clp protease [Bacteroides sp. 1_1_14]
gi|298273450|gb|EFI15013.1| Clp protease [Bacteroides sp. D22]
gi|298512903|gb|EFI36790.1| Clp protease [Bacteroides sp. 3_1_23]
gi|313694195|gb|EFS31030.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides sp. D2]
Length = 220
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 134/191 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R ALP++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+VL+ +
Sbjct: 210 YGMIDEVLIKK 220
>gi|328882449|emb|CCA55688.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
venezuelae ATCC 10712]
Length = 224
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 92/195 (47%), Positives = 139/195 (71%), Gaps = 1/195 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 25 VVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 85 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 144
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPSGG Q SD+E A++I++++ +L ++ K+ E++ ++RD I++A +A
Sbjct: 145 HQPSGGTGREQLSDLEIAAREILRMRTQLEDMLAKHSSTPIEKIRDDIERDKILTAEDAL 204
Query: 197 DWGVVDKVLMSRIDI 211
+G+VD+++ +R
Sbjct: 205 AYGLVDQIVSTRKST 219
>gi|116670950|ref|YP_831883.1| ATP-dependent Clp protease proteolytic subunit [Arthrobacter sp.
FB24]
gi|116611059|gb|ABK03783.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
sp. FB24]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 142/210 (67%), Gaps = 4/210 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F A + ++P E+T G + D Y++L ++RI+F+ Q++D A + A
Sbjct: 11 NFGSSAGNLPTSRY--VLPQFEERTPYGFKRQDPYTKLFEDRIIFLGVQVDDASADDVMA 68
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I+LYINSPGG TA AIYDTMQ+I+P I T C+GQAAS ++LL+A
Sbjct: 69 QLLVLESTDPDRDITLYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAAAVLLAA 128
Query: 122 GEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
G G R ALPNAR+L+HQP SGG GQASD+E A ++++++ L + K+ G+T E+
Sbjct: 129 GTPGKRLALPNARVLIHQPALSGGQGGQASDLEIQAAEVMRMRSWLEDTLAKHSGRTSEQ 188
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V ++RD I++A+EA +G++D+VL SR
Sbjct: 189 VNNDIERDKILTAAEAQSYGLIDQVLDSRK 218
>gi|302345891|ref|YP_003814244.1| Clp protease [Prevotella melaninogenica ATCC 25845]
gi|302149660|gb|ADK95922.1| Clp protease [Prevotella melaninogenica ATCC 25845]
Length = 230
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ ERI+F+ Q++D+ A I AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMERIIFLGTQVDDYSANTIQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATLCTGMAASMAAVLLVAGKEGKRSALKHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ + +++V DR++ M++ EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAREIQKFKKELYNIISEHSHQPFDKVWNDSDRNYWMTSEEAKE 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VLM +
Sbjct: 210 YGMIDEVLMRKP 221
>gi|153809070|ref|ZP_01961738.1| hypothetical protein BACCAC_03378 [Bacteroides caccae ATCC 43185]
gi|149128403|gb|EDM19622.1| hypothetical protein BACCAC_03378 [Bacteroides caccae ATCC 43185]
Length = 220
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 135/191 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG++G R ALP++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGKEGKRSALPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+VL+ +
Sbjct: 210 YGMIDEVLIKK 220
>gi|239931288|ref|ZP_04688241.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
ghanaensis ATCC 14672]
gi|291439661|ref|ZP_06579051.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces
ghanaensis ATCC 14672]
gi|291342556|gb|EFE69512.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces
ghanaensis ATCC 14672]
Length = 226
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ++KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQYVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L E+ K+ + +++ + ++RD I++A +A
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRTQLEEMLAKHSTRPIDKIREDIERDKILTAEDAL 206
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 207 QYGLIDQIITTRK 219
>gi|226360501|ref|YP_002778279.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
gi|226238986|dbj|BAH49334.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
Length = 220
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 89/209 (42%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S G A + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A + A
Sbjct: 9 SLGGQAPAGPQSRY--ILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMA 66
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I+T C+GQAAS ++LL+A
Sbjct: 67 QLLVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAA 126
Query: 122 GEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R ALPNAR+L+HQP+ G GQ SD+E A +I +++R + K+ GK + +
Sbjct: 127 GTPGKRLALPNARVLIHQPATGGIQGQVSDLEIQAAEIERMRRLMETTLAKHTGKDADVI 186
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD I++A+EA D+G++D VL R
Sbjct: 187 RKDTDRDKILTAAEAKDYGIIDDVLEYRK 215
>gi|172041060|ref|YP_001800774.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
urealyticum DSM 7109]
gi|171852364|emb|CAQ05340.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
urealyticum DSM 7109]
Length = 198
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 90/176 (51%), Positives = 124/176 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P+K+ISLYINSPGG VTAGMAI+D
Sbjct: 22 VFERLLRERIIFLGSQVDDEIANKLCAQILLLAAEDPEKDISLYINSPGGSVTAGMAIFD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+ I+T+ MG AASMG LLSAG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 82 TMQYAPCDIATYGMGLAASMGQFLLSAGTKGKRYALPHARIMMHQPSAGVGGTAADIAIQ 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ KR + E+ G+T E++ K DRD +A +A ++G VD V+ S +
Sbjct: 142 AEQFAHTKREMAELIAGFTGQTVEQITKDSDRDRWFTAEQAKEYGFVDHVISSAKE 197
>gi|311896031|dbj|BAJ28439.1| putative ATP-dependent Clp protease proteolytic subunit
[Kitasatospora setae KM-6054]
Length = 220
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 139/193 (72%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ERI+F+ Q++D A I AQL+ LE+ +P ++ISL
Sbjct: 23 IVPRFVERTSQGIREYDPYAKLFEERIIFLGSQVDDVSANDIMAQLICLESMDPDRDISL 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS +++L+AG G R ALPNAR+L+
Sbjct: 83 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVILAAGTPGKRLALPNARVLI 142
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A++I +++ +L + K+ +T ++V + ++RD I++A E+
Sbjct: 143 HQPYTETGRGQVSDLEIQAKEIFRMREQLETMLAKHSSQTVDKVREDIERDKILTAEESL 202
Query: 197 DWGVVDKVLMSRI 209
++G++D+++ +R
Sbjct: 203 EYGLIDQIVSTRK 215
>gi|72162592|ref|YP_290249.1| ATP-dependent Clp protease proteolytic subunit [Thermobifida fusca
YX]
gi|124013819|sp|Q47MU3|CLPP1_THEFY RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|71916324|gb|AAZ56226.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2
peptidase. Serine peptidase. MEROPS family S14
[Thermobifida fusca YX]
Length = 222
Score = 190 bits (483), Expect = 1e-46, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 140/206 (67%), Gaps = 3/206 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G A + + ++P +E+T G + + Y++L +ERI+FV QI+D A I AQ++
Sbjct: 15 GMAPMAPQSRY--VLPSYIERTAYGVKEMNPYNKLFEERIIFVGVQIDDTSANDIIAQMM 72
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE + ++I+LYINSPGG T+ MAIYDTMQF++P I T C+GQAAS ++LL+ G K
Sbjct: 73 TLEHIDSDRDITLYINSPGGSFTSLMAIYDTMQFVRPDIQTVCVGQAASAAAVLLAGGTK 132
Query: 125 GMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
G R ALPN+RIL+HQP+ GQASD+E A +I++I+ +L I K+ G++ EE+ +
Sbjct: 133 GKRTALPNSRILIHQPATEGTHGQASDVEIMANEIMRIRHQLETILAKHTGRSVEEISRD 192
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
++RD I++A EA ++G+VD VL R
Sbjct: 193 IERDKILTAEEAKEYGIVDDVLPYRK 218
>gi|227542940|ref|ZP_03972989.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glucuronolyticum ATCC 51866]
gi|227181162|gb|EEI62134.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glucuronolyticum ATCC 51866]
Length = 187
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 123/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ ++ D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 7 VYERLLRERIIFLGSEVNDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 66
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ ++T+ MG AASMG LL+AG KG R+ALP+ARIL+HQPS G G ASDI
Sbjct: 67 TMKYAPCDVATYAMGLAASMGQFLLTAGTKGKRYALPHARILMHQPSAGVGGTASDIAIQ 126
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ K+ + E+ ++ G+T+E++ K DRD +A EA D+G+ D V+
Sbjct: 127 AQQFALTKKEMAELIAEHSGQTFEQISKDSDRDRWFTAEEARDYGLCDHVISH 179
>gi|325107894|ref|YP_004268962.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
gi|324968162|gb|ADY58940.1| ATP-dependent Clp protease proteolytic subunit ClpP [Planctomyces
brasiliensis DSM 5305]
Length = 215
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 79/186 (42%), Positives = 123/186 (66%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
+R I LL RI+F+ G I D A LI +LL+L++EN +++ LYINSPGG VTA
Sbjct: 29 QRQMGIGDLLLDNRIIFLDGPIHDASANLIVMKLLYLQSENRHQDVHLYINSPGGSVTAT 88
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+AIYDTMQF+ ++T+C+G AAS G++L++ G KG R++LP++++++HQP G GQ S
Sbjct: 89 LAIYDTMQFLDCDVATYCVGLAASGGAVLMAGGAKGKRYSLPHSKMMIHQPFGQVGGQVS 148
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE AQ+I+ + LN+I + G+ E + K +RD ++A EA ++G+VD+V+
Sbjct: 149 DIEIQAQEIINTRETLNQILADHTGQPIERIAKDTERDRYLTAKEAKEYGLVDEVVEKIK 208
Query: 210 DIEEKS 215
+
Sbjct: 209 KTAAEK 214
>gi|288803882|ref|ZP_06409307.1| Clp protease [Prevotella melaninogenica D18]
gi|288333647|gb|EFC72097.1| Clp protease [Prevotella melaninogenica D18]
Length = 230
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ ERI+F+ Q++D+ A I AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMERIIFLGTQVDDYSANTIQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATLCTGMAASMAAVLLVAGKEGKRSALKHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ + +++V DR++ M++ EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAREIQKFKKELYTIISEHSHQPFDKVWNDSDRNYWMTSEEAKE 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VLM +
Sbjct: 210 YGMIDEVLMRKP 221
>gi|320534809|ref|ZP_08035228.1| Clp protease [Actinomyces sp. oral taxon 171 str. F0337]
gi|320132988|gb|EFW25517.1| Clp protease [Actinomyces sp. oral taxon 171 str. F0337]
Length = 224
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 92/211 (43%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 FEGCAKKD---SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
FE A++ + + ++P E+T G + D Y++L ++RIVF+ Q++D A I
Sbjct: 8 FEAIARQAGTLPQARY--VLPQFEERTAYGFKRQDPYAKLFEDRIVFMGVQVDDASADDI 65
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LE+++P I++YINSPGG TA AIYDTMQ+IKP + T C+GQAAS ++LL
Sbjct: 66 MAQLLVLESQDPDGLITMYINSPGGSFTALTAIYDTMQYIKPQVQTVCLGQAASAAAVLL 125
Query: 120 SAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+AG +G R ALPNAR+L+HQP+ GQASDIE A ++ +++ L + + G+ E
Sbjct: 126 AAGSEGKRLALPNARVLIHQPAMEGMQGQASDIEIVANEMDRMRSWLEDTLAAHTGQDRE 185
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ L+RD I++A+ A ++G+VD+VL SR
Sbjct: 186 KIHADLERDKILTAAAAKEYGIVDQVLTSRK 216
>gi|213966160|ref|ZP_03394346.1| Clp protease [Corynebacterium amycolatum SK46]
gi|213951175|gb|EEB62571.1| Clp protease [Corynebacterium amycolatum SK46]
Length = 190
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 86/177 (48%), Positives = 125/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ +LLKERI+++ Q++D +A +C Q+L L AE+P+ +ISLYINSPGG VTAGMAIYD
Sbjct: 12 VFDKLLKERIIWLGEQVDDEIANKLCGQMLLLAAEDPESDISLYINSPGGSVTAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+ ++T+ MG AASMG LL+AG KG R+ALP+ARI++HQPS G G ASDI
Sbjct: 72 TMQFVPCDVATYGMGLAASMGQFLLAAGAKGKRYALPHARIMMHQPSAGIGGTASDITIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ K+ + + ++ G+ E +E+ DRD +A+EA ++G+VD V+ + D
Sbjct: 132 AEQFAATKKEMARLIAQHTGQPVERIEEDSDRDRWFTAAEAKEYGLVDHVVTALKDT 188
>gi|258652074|ref|YP_003201230.1| endopeptidase Clp [Nakamurella multipartita DSM 44233]
gi|258555299|gb|ACV78241.1| Endopeptidase Clp [Nakamurella multipartita DSM 44233]
Length = 220
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 96/207 (46%), Positives = 141/207 (68%), Gaps = 3/207 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G A + + ++P VE+T+ G + + Y++L +ERI+F+ QI+D A + AQL
Sbjct: 14 HGEALSLPQARY--ILPSFVERTSYGVKESNPYNKLFEERIIFLGVQIDDASANDVMAQL 71
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+ +P +EI +YINSPGG T+ AIYDTMQF++P I T C+GQAAS ++LL+AG
Sbjct: 72 LTLESTDPDREIIMYINSPGGSFTSMTAIYDTMQFVRPHIQTVCLGQAASAAAVLLAAGS 131
Query: 124 KGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPN+RIL+HQP+ GQ SD+E A++I +++ L EI ++ KT EEV K
Sbjct: 132 PGRRLALPNSRILIHQPATEGVYGQVSDLEIQAKEIGRMRAALEEILSRHSTKTPEEVRK 191
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD I++A+EA D+G++D+VL R
Sbjct: 192 DIDRDKILTAAEAKDYGLIDEVLQYRK 218
>gi|302551409|ref|ZP_07303751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
gi|302469027|gb|EFL32120.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
Length = 235
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 90/210 (42%), Positives = 140/210 (66%), Gaps = 1/210 (0%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS + ++P VE+T++G R YD Y++L +ER++F+ QI+D A +
Sbjct: 19 MSDSQGRYTGPQAESRYVIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVM 78
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+ +P ++IS+YINSPGG TA AIYDTMQ++KP I T CMGQAAS ++LL+
Sbjct: 79 AQLLCLESMDPDRDISVYINSPGGSFTALTAIYDTMQYVKPDIQTVCMGQAASAAAVLLA 138
Query: 121 AGEKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R ALPNAR+L+HQP GQ SD+E A +I++++ +L E+ K+ E+
Sbjct: 139 AGTPGKRMALPNARVLIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPVEK 198
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ + ++RD I++A +A +G++D+++ +R
Sbjct: 199 IREDIERDKILTAEDALSYGLIDQIITTRK 228
>gi|161833700|ref|YP_001597896.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia
muelleri GWSS]
gi|293977810|ref|YP_003543240.1| protease subunit of ATp-dependent Clp protease [Candidatus Sulcia
muelleri DMIN]
gi|152206190|gb|ABS30500.1| ATP-dependent Clp protease, proteolytic subunit [Candidatus Sulcia
muelleri GWSS]
gi|292667741|gb|ADE35376.1| Protease subunit of ATP-dependent Clp protease [Candidatus Sulcia
muelleri DMIN]
Length = 219
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 84/189 (44%), Positives = 133/189 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I+D +A +I AQLLFL++ + K I
Sbjct: 30 SMTPYIMEERKYNVSQMDVFSRLMMDRIIFLGTPIDDQIANIIQAQLLFLQSLDSNKGIQ 89
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V +G+ IYDTMQ +KP IST C G AASM ++LL +G+KG R L ++R+L
Sbjct: 90 IYINSPGGSVYSGLGIYDTMQILKPEISTICTGIAASMAAILLCSGKKGKRSILKHSRVL 149
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G GQ+SD+E ++I+K+K LN+I ++ + +E+V+K DRD+ M++ EA
Sbjct: 150 IHQPIGYAKGQSSDMEITVREILKLKEELNKIISEHTNQPFEKVQKDSDRDYWMTSEEAK 209
Query: 197 DWGVVDKVL 205
++G+VD++L
Sbjct: 210 NYGIVDEIL 218
>gi|111018381|ref|YP_701353.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus jostii
RHA1]
gi|116243108|sp|Q0SGZ1|CLPP1_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|110817911|gb|ABG93195.1| ATP-dependent Clp protease [Rhodococcus jostii RHA1]
Length = 220
Score = 190 bits (482), Expect = 1e-46, Method: Composition-based stats.
Identities = 88/209 (42%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
S G A + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A + A
Sbjct: 9 SLGGQAPAGPQSRY--ILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMA 66
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I+T C+GQAAS ++LL+A
Sbjct: 67 QLLVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAA 126
Query: 122 GEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G G R ALPNAR+L+HQP+ G GQ SD+E A +I +++R + K+ GK +
Sbjct: 127 GSPGKRLALPNARVLIHQPATGGIQGQVSDLEIQAAEIERMRRLMETTLAKHTGKDAAVI 186
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD I++A+EA ++G++D VL R
Sbjct: 187 RKDTDRDKILTAAEAKEYGIIDDVLEYRK 215
>gi|302869360|ref|YP_003837997.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
gi|315504165|ref|YP_004083052.1| endopeptidase clp [Micromonospora sp. L5]
gi|302572219|gb|ADL48421.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
gi|315410784|gb|ADU08901.1| Endopeptidase Clp [Micromonospora sp. L5]
Length = 213
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/179 (50%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+F+ ++ D +A ICAQLL L AE+P ++I L+INSPGG V +GMAIYD
Sbjct: 29 VYNRLLKERIIFLGSEVNDQVANRICAQLLLLAAEDPDRDIFLWINSPGGSVYSGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I +ST MG AASMG LLL AG KG R+ALP+ARI++HQPSGG G ASDI
Sbjct: 89 TMQYIDNDVSTVAMGMAASMGQLLLCAGTKGKRYALPHARIMMHQPSGGLGGTASDIAIQ 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A+ ++ KR E + G++ ++E DRD +A EA D+G +DKV++ + +
Sbjct: 149 AEQMLYTKRMFQERVAFHTGQSQAQIEADSDRDRWFTAQEAMDYGFIDKVIIGAAQVPD 207
>gi|307328455|ref|ZP_07607630.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
gi|306885867|gb|EFN16878.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
Length = 218
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/204 (44%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL L
Sbjct: 9 LYNGPMAESRYVVPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCL 68
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++IS+YINSPGG TA AIYDTM+F+KP I T CMGQAAS ++LL+AG G
Sbjct: 69 ESMDPDRDISVYINSPGGSFTALTAIYDTMEFVKPDIQTVCMGQAASAAAVLLAAGTPGK 128
Query: 127 RFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNARIL+HQP GQ SD+E A +I++++ +L E+ K+ E++ ++
Sbjct: 129 RMALPNARILIHQPYSETGRGQVSDLEIAANEILRMRSQLEEMLAKHSTTPIEKIRDDIE 188
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A E+ +G+VD+++ +R
Sbjct: 189 RDKILTAEESLAYGLVDQIVSTRK 212
>gi|295395010|ref|ZP_06805222.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium
mcbrellneri ATCC 49030]
gi|294972169|gb|EFG48032.1| ATP-dependent Clp protease proteolytic subunit [Brevibacterium
mcbrellneri ATCC 49030]
Length = 215
Score = 190 bits (482), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/210 (43%), Positives = 140/210 (66%), Gaps = 4/210 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
A + ++P E+T G + D Y++L ++R++F+ Q++D A + AQLL
Sbjct: 8 ATAGNMPTSRY--VMPQFEERTPYGFKRQDPYTKLFEDRVIFLGVQVDDTSADDVMAQLL 65
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE+++P ++I+LYINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+AG
Sbjct: 66 VLESQDPDRDITLYINSPGGSFTALTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAAGAP 125
Query: 125 GMRFALPNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPNAR+L+HQP+ GQASD+E A ++++++R L E K+ K+ +EV
Sbjct: 126 GKRLALPNARVLIHQPAMQGQGQGQASDLEIQANEVLRMRRWLEETLAKHSNKSADEVSN 185
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++RD ++A EA ++G+VD+VL SR ++
Sbjct: 186 DIERDLFLTAEEAKNYGLVDQVLSSRKGVK 215
>gi|72162593|ref|YP_290250.1| ClpP1 peptidase [Thermobifida fusca YX]
gi|124013822|sp|Q47MU2|CLPP2_THEFY RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|71916325|gb|AAZ56227.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Thermobifida
fusca YX]
Length = 203
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/206 (43%), Positives = 129/206 (62%), Gaps = 10/206 (4%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ + + PM EQT + RLL++RIVF+ Q++D +A I +LL
Sbjct: 3 PTHNEFMRTDVPMQPMY-EQTAQ---------RLLRQRIVFLGQQVDDEIANRIVGELLL 52
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L AE+ +++I+LYINSPGG VTAGMAIYD MQ+I + T +G AASMG +LL AG +G
Sbjct: 53 LSAEDRERDITLYINSPGGSVTAGMAIYDVMQYIPNDVRTVGIGLAASMGQMLLCAGTRG 112
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ALP+ RI++HQPSGG G ASDI A ++ +K+ E + G+ E++EK D
Sbjct: 113 KRYALPHTRIMMHQPSGGIGGTASDIRILADQLLYVKKMFLERISLHTGQPVEQIEKDAD 172
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
RD +A EA ++G +D+VL + D+
Sbjct: 173 RDRWFTAQEALEYGFIDEVLTNTPDV 198
>gi|325066963|ref|ZP_08125636.1| Endopeptidase Clp [Actinomyces oris K20]
gi|326771855|ref|ZP_08231140.1| Clp protease [Actinomyces viscosus C505]
gi|326637988|gb|EGE38889.1| Clp protease [Actinomyces viscosus C505]
Length = 212
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 96/181 (53%), Positives = 130/181 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQ+L L AE+P+++I LYINSPGG VTAGMAIYD
Sbjct: 29 IYNRLLKERIIWLGSEVRDDNANAICAQMLLLAAEDPERDIYLYINSPGGSVTAGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+++P ++T G AASMG LLSAG KG R+ P+AR+L+HQPSGG G A+DI +
Sbjct: 89 TMQYVQPDVATVATGLAASMGQHLLSAGAKGKRYLTPHARVLMHQPSGGAGGSATDIRIN 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+K+K+ L EI N G T EE+ DRDH SA EA ++G VD ++ S +I ++
Sbjct: 149 ADLIIKMKQELAEITAANTGHTVEEIIADSDRDHWFSAQEALEYGFVDHIVRSSREIGKQ 208
Query: 215 S 215
+
Sbjct: 209 N 209
>gi|303236896|ref|ZP_07323475.1| Clp protease [Prevotella disiens FB035-09AN]
gi|302483064|gb|EFL46080.1| Clp protease [Prevotella disiens FB035-09AN]
Length = 228
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 90/192 (46%), Positives = 140/192 (72%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 37 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 96
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASMG++LL AG++G R ALP++R+++
Sbjct: 97 YINSPGGSVTAGLGIYDTMQFITSDVATICTGMAASMGAVLLVAGQEGKRSALPHSRVMI 156
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K+ L I + ++YE+V + DR++ M+A EA +
Sbjct: 157 HQPLGGVQGQASDIEIEAKEILKFKKELYTIISNHSHQSYEKVYQDSDRNYWMTAEEAKE 216
Query: 198 WGVVDKVLMSRI 209
+G++D++L+ +
Sbjct: 217 YGMIDQILIRKK 228
>gi|229821079|ref|YP_002882605.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
gi|229566992|gb|ACQ80843.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
Length = 213
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/177 (49%), Positives = 125/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A IC Q++ L AE+P K+I LYINSPGG VTAGMAIYD
Sbjct: 29 IYNRLLKERIIWLGSEVRDDNANQICGQMMLLAAEDPTKDIWLYINSPGGSVTAGMAIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+++P ++T MG AASMG LL++G KG R+A P+AR+++HQPSGG G A+DI +
Sbjct: 89 TMQYVQPDVATVAMGMAASMGQFLLASGAKGKRYATPHARVMMHQPSGGIGGTATDIRIN 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ I+ +KR + E+ + GKT E+V DRD +A EA ++G +D V+ +
Sbjct: 149 AELILHMKRVMAELTAEQTGKTVEQVNADADRDRWFTAEEAREYGFIDHVVTHAASV 205
>gi|290960371|ref|YP_003491553.1| ATP dependent Clp protease proteolytic subunit 2 [Streptomyces
scabiei 87.22]
gi|260649897|emb|CBG73013.1| ATP dependent Clp protease proteolytic subunit 2 [Streptomyces
scabiei 87.22]
Length = 226
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 27 VIPRFVERTSQGIREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISV 86
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 87 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAILLAAGTPGKRMALPNARVLI 146
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP GQ SD+E A +I++++ +L ++ K+ E++ + ++RD I++A +A
Sbjct: 147 HQPYSETGRGQVSDLEIAANEILRMRGQLEDMLAKHSTTPIEKIREDIERDKILTAEDAL 206
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 207 SYGLIDQIISTRK 219
>gi|262192152|ref|ZP_06050312.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae CT
5369-93]
gi|262031941|gb|EEY50519.1| ATP-dependent Clp protease proteolytic subunit [Vibrio cholerae CT
5369-93]
Length = 167
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 100/166 (60%), Positives = 131/166 (78%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+F+TGQ+EDHMA L+ AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +S
Sbjct: 2 IFLTGQVEDHMANLVVAQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVS 61
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T CMGQA SMG+ LL+ G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +
Sbjct: 62 TVCMGQACSMGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNK 121
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
LN + ++ G+ E +E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 122 LNRLLAEHTGQPIEVIERDTDRDNFMSADQAVEYGLVDAVLKHRGE 167
>gi|160890572|ref|ZP_02071575.1| hypothetical protein BACUNI_03015 [Bacteroides uniformis ATCC 8492]
gi|270295709|ref|ZP_06201909.1| Clp protease [Bacteroides sp. D20]
gi|317479886|ref|ZP_07939003.1| Clp protease [Bacteroides sp. 4_1_36]
gi|156859571|gb|EDO53002.1| hypothetical protein BACUNI_03015 [Bacteroides uniformis ATCC 8492]
gi|270273113|gb|EFA18975.1| Clp protease [Bacteroides sp. D20]
gi|316903960|gb|EFV25797.1| Clp protease [Bacteroides sp. 4_1_36]
Length = 220
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 133/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTPFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G+VD+VL+ +
Sbjct: 210 YGMVDEVLIKK 220
>gi|84494298|ref|ZP_00993417.1| ATP-dependent Clp protease proteolytic subunit [Janibacter sp.
HTCC2649]
gi|84383791|gb|EAP99671.1| ATP-dependent Clp protease proteolytic subunit [Janibacter sp.
HTCC2649]
Length = 219
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 138/211 (65%), Gaps = 3/211 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + ++P E+T+ G + D Y++L ++RI+F+ Q++D A + AQL
Sbjct: 10 SGLHMPAPSSRY--ILPQFEERTSYGMKRTDPYTKLFEDRIIFLGVQVDDASADDVIAQL 67
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
+ LE+++P ++I +YINSPGG TA AIYDTMQ+I+P + TF +GQAAS ++LL AG
Sbjct: 68 IVLESQDPDRDILMYINSPGGSFTAMTAIYDTMQYIRPDVQTFVIGQAASAAAVLLGAGA 127
Query: 124 KGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R+ALPNAR+L+HQP+ G ASD+E A ++++++ L + + G+ E V K
Sbjct: 128 PGKRYALPNARVLIHQPAIEGTGGMASDLEIQANEVLRMRGWLEDTIASHSGRDVELVRK 187
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++RD I+SA++A ++G++D+VL SR E
Sbjct: 188 DIERDKILSAAQAKEYGLIDEVLASRKATNE 218
>gi|319947980|ref|ZP_08022157.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
gi|319438326|gb|EFV93269.1| ATP-dependent Clp protease proteolytic subunit [Dietzia cinnamea
P4]
Length = 207
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 135/204 (66%), Gaps = 3/204 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 1 MTSLPSSRY--ILPSFVEHSSYGVKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVL 58
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E ++P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG KG
Sbjct: 59 EGQDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVVTVCLGQAASAAAVLLAAGTKGK 118
Query: 127 RFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNARIL+HQP+ G GQ SD+E A +I +++R + ++ G+ +++ K D
Sbjct: 119 RAALPNARILIHQPATGGIQGQVSDLEIQAAEIERMRRLMETTLARHTGRDADQIRKDTD 178
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA D+G++D V R
Sbjct: 179 RDKILTAEEAKDYGIIDTVFDYRK 202
>gi|254382769|ref|ZP_04998126.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces sp.
Mg1]
gi|194341671|gb|EDX22637.1| ATP-dependent Clp protease proteolytic subunit 4 [Streptomyces sp.
Mg1]
Length = 224
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ERI+F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 28 VIPRFVERTSQGVREYDPYAKLFEERIIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 87
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP IST CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 88 YINSPGGSFTALTAIYDTMQFVKPDISTVCMGQAASAAAVLLAAGTPGKRLALPNARVLI 147
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPSGG Q SD+E A +I++++ +L + K+ E++ ++RD I++A +A
Sbjct: 148 HQPSGGTGREQLSDLEIAANEILRMRDQLETMLAKHSTTPIEKIRDDIERDKILTAEDAL 207
Query: 197 DWGVVDKVLMSRI 209
+G+VD+V+ +R
Sbjct: 208 AYGLVDQVVSTRK 220
>gi|325300151|ref|YP_004260068.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
salanitronis DSM 18170]
gi|324319704|gb|ADY37595.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
salanitronis DSM 18170]
Length = 222
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/211 (41%), Positives = 136/211 (64%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+ D L P ++E+ D++SRL+ +RI+F+ QI+D+ A +
Sbjct: 12 LGMSSMVLDDVIKSQSYLNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQ 71
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL+L++ + K+IS+YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL
Sbjct: 72 AQLLYLDSVDSGKDISIYINSPGGSVYAGLGIYDTMQFIGSDVATICTGMAASMAAVLLV 131
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG++G R AL ++R+++HQP GG GQASDIE A++I K+K+ L I ++ +++V
Sbjct: 132 AGKEGKRSALTHSRVMIHQPMGGAQGQASDIEITAREIQKLKKELYTIIAEHSHTDFDKV 191
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
DRD+ M+A EA ++G++D+VL + +
Sbjct: 192 WADSDRDYWMTAQEAKEYGMIDEVLSRKSAL 222
>gi|325963648|ref|YP_004241554.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469735|gb|ADX73420.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
phenanthrenivorans Sphe3]
Length = 219
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 140/210 (66%), Gaps = 4/210 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F A + ++P E+T G + D Y++L ++RI+F+ Q++D A I A
Sbjct: 4 NFGWSAGNLPSSRY--VLPQFEERTPYGFKRQDPYTKLFEDRIIFLGVQVDDASADDIMA 61
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I+LYINSPGG TA AIYDTMQ+I+P I T C+GQAAS ++LL+A
Sbjct: 62 QLLVLESTDPDRDITLYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAAAVLLAA 121
Query: 122 GEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
G G R ALPNAR+L+HQP SGG GQASD+E A ++++++ L + + G+T E+
Sbjct: 122 GTPGKRLALPNARVLIHQPALSGGQGGQASDLEIQAAEVMRMRSWLEDTLAHHSGRTSEQ 181
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V ++RD I++A EA +G++D+VL SR
Sbjct: 182 VNNDIERDKILTAEEAQVYGLIDQVLDSRK 211
>gi|152968202|ref|YP_001363986.1| endopeptidase Clp [Kineococcus radiotolerans SRS30216]
gi|151362719|gb|ABS05722.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216]
Length = 198
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 90/188 (47%), Positives = 136/188 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VVE T RGER+ D++SRLL +RIVF+ G+I+D +A ++ AQL+ L +E+ EISLY
Sbjct: 5 IPHVVETTARGERTSDVFSRLLSDRIVFLHGEIDDGVANVVIAQLVHLASESSTAEISLY 64
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG TA MAIYDTMQF++P ++TFC+GQAAS ++LL+AG G R L ++R+LLH
Sbjct: 65 VNSPGGSATALMAIYDTMQFVQPDVATFCVGQAASAAAVLLAAGAPGKRSVLEHSRVLLH 124
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+D++ A+++++I+ + + ++ G E + LDRD ++ +EA +
Sbjct: 125 QPSGGAQGTAADLQIQAREVLRIRSEIERVLARHTGHPVERLRADLDRDLVLPGAEAVAY 184
Query: 199 GVVDKVLM 206
GV D+V+
Sbjct: 185 GVADRVVT 192
>gi|224025975|ref|ZP_03644341.1| hypothetical protein BACCOPRO_02726 [Bacteroides coprophilus DSM
18228]
gi|224019211|gb|EEF77209.1| hypothetical protein BACCOPRO_02726 [Bacteroides coprophilus DSM
18228]
Length = 224
Score = 189 bits (481), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 132/192 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ + K+IS+
Sbjct: 31 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDAGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 91 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGKEGKRSALTHSRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 151 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 210
Query: 198 WGVVDKVLMSRI 209
+G++D+VL +
Sbjct: 211 YGMIDEVLSRKP 222
>gi|325268720|ref|ZP_08135349.1| ATP-dependent Clp protease, protease subunit [Prevotella
multiformis DSM 16608]
gi|324988964|gb|EGC20918.1| ATP-dependent Clp protease, protease subunit [Prevotella
multiformis DSM 16608]
Length = 253
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 53 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 112
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 113 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSALTHSRVMI 172
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + + +++V DR++ M+A EA +
Sbjct: 173 HQPLGGVQGQASDIEIEAREIQKFKKELYTIISNHSHQPFDKVWNDSDRNYWMTAEEARE 232
Query: 198 WGVVDKVLMSRI 209
+G++D+VL +
Sbjct: 233 YGMIDEVLTRKP 244
>gi|220912906|ref|YP_002488215.1| ATP-dependent Clp protease proteolytic subunit [Arthrobacter
chlorophenolicus A6]
gi|219859784|gb|ACL40126.1| Endopeptidase Clp [Arthrobacter chlorophenolicus A6]
Length = 219
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/210 (44%), Positives = 141/210 (67%), Gaps = 4/210 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F A + ++P E+T G + D Y++L ++RI+F+ Q++D A I A
Sbjct: 4 NFGWSAGNLPSSRY--VLPQFEERTPYGFKRQDPYTKLFEDRIIFLGVQVDDASADDIMA 61
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I+LYINSPGG TA AIYDTMQ+I+P I T C+GQAAS ++LL+A
Sbjct: 62 QLLVLESTDPDRDITLYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAAAVLLAA 121
Query: 122 GEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
G G R ALPNAR+L+HQP SGG GQASD+E A ++++++ L + + G+T E+
Sbjct: 122 GTPGKRLALPNARVLIHQPALSGGQGGQASDLEIQAAEVMRMRSWLEDTLAHHSGRTSEQ 181
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V ++RD I++A+EA +G++D+VL SR
Sbjct: 182 VNNDIERDKILTAAEAQSYGLIDQVLDSRK 211
>gi|159039407|ref|YP_001538660.1| endopeptidase Clp [Salinispora arenicola CNS-205]
gi|157918242|gb|ABV99669.1| Endopeptidase Clp [Salinispora arenicola CNS-205]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE +P ++I +
Sbjct: 18 VLPSFVERTSYGVKESNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLEGTDPDRDIIM 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P I T C+GQAAS ++LLSAG G R ALPN+RI++
Sbjct: 78 YINSPGGSFTAMTAIYDTMQYVRPDIQTVCLGQAASAAAVLLSAGTPGKRMALPNSRIII 137
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SDIE A++I++++ +L E+ ++C + E+V K +DRD IM+A E+
Sbjct: 138 HQPATEGGYGQGSDIEIQAREILRMRTQLEEMLSRHCNQPVEKVRKDIDRDKIMTAEESR 197
Query: 197 DWGVVDKVLMSRID 210
++G+VD +L SR
Sbjct: 198 EYGLVDTILTSRKK 211
>gi|145596010|ref|YP_001160307.1| endopeptidase Clp [Salinispora tropica CNB-440]
gi|145305347|gb|ABP55929.1| Endopeptidase Clp [Salinispora tropica CNB-440]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE +P ++I +
Sbjct: 18 VLPSFVERTSYGVKESNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLEGTDPDRDIIM 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P I T C+GQAAS ++LLSAG G R ALPN+RI++
Sbjct: 78 YINSPGGSFTAMTAIYDTMQYVRPDIQTVCLGQAASAAAMLLSAGTPGKRMALPNSRIII 137
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SDIE A++I++++ +L E+ ++C + E+V K +DRD IM+A E+
Sbjct: 138 HQPATEGGYGQGSDIEIQAREILRMRTQLEEMLSRHCNQPVEKVRKDIDRDKIMTAEESR 197
Query: 197 DWGVVDKVLMSRID 210
++G+VD +L SR
Sbjct: 198 EYGLVDTILTSRKK 211
>gi|152967460|ref|YP_001363244.1| endopeptidase Clp [Kineococcus radiotolerans SRS30216]
gi|151361977|gb|ABS04980.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216]
Length = 213
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/178 (48%), Positives = 126/178 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RI+++ ++ D MA ICAQLL L AE+P +I +YINSPGG V+AGM+IYD
Sbjct: 29 VYQRLLQQRIIWLGTEVRDDMANAICAQLLLLAAEDPDADIFMYINSPGGSVSAGMSIYD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP ++T G AASMG LL AG G R ALP+A+I++HQP GG G ASDI+
Sbjct: 89 TMQYIKPDVATIATGMAASMGQFLLCAGAAGKRSALPHAKIMMHQPLGGLGGSASDIKIL 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ I+ K+++ E+ ++ G+T+E + + DRD SA EA ++G++D V+ ++E
Sbjct: 149 AEQIIATKKQMAELIAQHSGQTFETITRDSDRDRWFSAQEAKEYGLIDHVVGHTSEVE 206
>gi|163786488|ref|ZP_02180936.1| ATP-dependent Clp protease, proteolytic subunit [Flavobacteriales
bacterium ALC-1]
gi|159878348|gb|EDP72404.1| ATP-dependent Clp protease, proteolytic subunit [Flavobacteriales
bacterium ALC-1]
Length = 224
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 137/192 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P ++E+ +D++SRL+ +RI+F+ + D +A +I AQLLFL++ + K++
Sbjct: 33 NLTPNIIEERQMNIAVFDVFSRLMMDRIIFLGTGVNDQVANIIQAQLLFLQSTDASKDVQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFIKP ++T C G AASM ++LL AGEKG R AL ++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQFIKPDVATICTGIAASMAAVLLCAGEKGKRSALKHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G GQ SD+E ++ +KIK+ L +I + GKTYE+VEK DRD+ M+++EA
Sbjct: 153 IHQPMSGTQGQVSDMEIAVRETLKIKKELYDIISGHSGKTYEQVEKDSDRDYWMTSNEAL 212
Query: 197 DWGVVDKVLMSR 208
D+G++D+VL +
Sbjct: 213 DYGMIDEVLGRK 224
>gi|325855169|ref|ZP_08171792.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella denticola CRIS 18C-A]
gi|327312568|ref|YP_004328005.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella denticola F0289]
gi|325483906|gb|EGC86850.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella denticola CRIS 18C-A]
gi|326946024|gb|AEA21909.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Prevotella denticola F0289]
Length = 227
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 134/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + + +++V DR++ M++ EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAREIQKFKKELYTIISNHSHQPFDKVWNDSDRNYWMTSEEARE 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VL +
Sbjct: 210 YGMIDEVLTRKP 221
>gi|238060618|ref|ZP_04605327.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
gi|237882429|gb|EEP71257.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
Length = 217
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE +P ++I +
Sbjct: 15 VLPSFVERTSYGVKESNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLEGTDPDRDIIM 74
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P IST C+GQAAS ++LL+AG G R ALPN+RI++
Sbjct: 75 YINSPGGSFTAMTAIYDTMQYVRPDISTVCLGQAASAAAVLLAAGTPGKRMALPNSRIII 134
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SDIE A++I++++ +L E+ ++C + E+V K +DRD IM+A E+
Sbjct: 135 HQPATEGGYGQGSDIEIQAREILRMRTQLEEMLSRHCNQPVEKVRKDIDRDKIMTAEESR 194
Query: 197 DWGVVDKVLMSRID 210
++G+VD +L SR
Sbjct: 195 EYGLVDTILTSRKK 208
>gi|54023301|ref|YP_117543.1| ATP-dependent Clp protease proteolytic subunit [Nocardia farcinica
IFM 10152]
gi|67460458|sp|Q5Z062|CLPP3_NOCFA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|54014809|dbj|BAD56179.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
Length = 221
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/209 (39%), Positives = 134/209 (64%), Gaps = 4/209 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
G A + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQ
Sbjct: 10 LSGIAPSSPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQ 67
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+ +P ++I++YINSPGG T+ MAIYDTMQ+++ ++T C+GQAAS ++LL+AG
Sbjct: 68 LLVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADVATVCLGQAASAAAVLLAAG 127
Query: 123 EKGMRFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
G R LPNAR+L+HQPS GQ SD+E A +I +++R + ++ GK + +
Sbjct: 128 TPGKRACLPNARVLIHQPSLEGGIQGQVSDLEIQAAEIERMRRLMETTLARHTGKDPDTI 187
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD I++A +A ++G++D V R
Sbjct: 188 RKDTDRDKILTAEDAKEYGIIDTVFDYRK 216
>gi|329946415|ref|ZP_08293982.1| endopeptidase Clp [Actinomyces sp. oral taxon 170 str. F0386]
gi|328527391|gb|EGF54389.1| endopeptidase Clp [Actinomyces sp. oral taxon 170 str. F0386]
Length = 224
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 94/211 (44%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 FEGCAKK---DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
FE A++ + + ++P E+T G + D Y++L ++RIVF+ Q++D A I
Sbjct: 8 FEAVARQAGAMPQARY--VLPQFEERTAYGFKRQDPYAKLFEDRIVFMGVQVDDASADDI 65
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LE+++P I++YINSPGG TA AIYDTMQ+IKP + T C+GQAAS ++LL
Sbjct: 66 MAQLLVLESQDPDGLITMYINSPGGSFTALTAIYDTMQYIKPQVQTVCLGQAASAAAVLL 125
Query: 120 SAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+AG +G R ALPNAR+L+HQP+ GQASDIE A +I +++ L + + G+ E
Sbjct: 126 AAGSEGKRLALPNARVLIHQPAMEGMQGQASDIEIVADEIDRMRSWLEDTLAAHTGQDRE 185
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ L+RD I++A+ A D+G+VD+VL SR
Sbjct: 186 KIHADLERDKILTAAAAKDYGIVDQVLTSRK 216
>gi|218128447|ref|ZP_03457251.1| hypothetical protein BACEGG_00015 [Bacteroides eggerthii DSM 20697]
gi|317475727|ref|ZP_07934986.1| Clp protease [Bacteroides eggerthii 1_2_48FAA]
gi|217989338|gb|EEC55651.1| hypothetical protein BACEGG_00015 [Bacteroides eggerthii DSM 20697]
gi|316908110|gb|EFV29805.1| Clp protease [Bacteroides eggerthii 1_2_48FAA]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 131/191 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTPFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+V +
Sbjct: 210 YGMIDQVYTKK 220
>gi|189463685|ref|ZP_03012470.1| hypothetical protein BACINT_00016 [Bacteroides intestinalis DSM
17393]
gi|189438635|gb|EDV07620.1| hypothetical protein BACINT_00016 [Bacteroides intestinalis DSM
17393]
Length = 220
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 133/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFITSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTPFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G+VD+VL+ +
Sbjct: 210 YGMVDEVLIKK 220
>gi|269125774|ref|YP_003299144.1| endopeptidase Clp [Thermomonospora curvata DSM 43183]
gi|268310732|gb|ACY97106.1| Endopeptidase Clp [Thermomonospora curvata DSM 43183]
Length = 223
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 93/193 (48%), Positives = 138/193 (71%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G + + Y++L +ERI+F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 23 IIPSFVERTTYGVKEMNPYNKLFEERIIFLGVQIDDASANDVMAQLLTLESIDPDRDISM 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA MAIYDTMQ+++P I T C+GQAAS ++LL+AG G R ALPN+RIL+
Sbjct: 83 YINSPGGSFTAMMAIYDTMQYVRPDIQTVCIGQAASAAAVLLAAGTPGKRAALPNSRILI 142
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ+SDIE A++I++I+ L EI ++ G+ E+V K ++RD I++A +A
Sbjct: 143 HQPATEGTYGQSSDIEIQAREIMRIRELLEEIISRHSGQPIEKVRKDIERDKILTAEDAK 202
Query: 197 DWGVVDKVLMSRI 209
+G+VD V +SR
Sbjct: 203 AYGLVDDVFVSRK 215
>gi|21219747|ref|NP_625526.1| ATP-dependent Clp protease [Streptomyces coelicolor A3(2)]
gi|256789167|ref|ZP_05527598.1| ATP-dependent Clp protease [Streptomyces lividans TK24]
gi|289773060|ref|ZP_06532438.1| Clp protease [Streptomyces lividans TK24]
gi|32171362|sp|Q9FCC9|CLPP5_STRCO RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|9716124|emb|CAC01462.1| putative ATP-dependent Clp protease [Streptomyces coelicolor A3(2)]
gi|289703259|gb|EFD70688.1| Clp protease [Streptomyces lividans TK24]
Length = 211
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YS+LL+ERIVF+ +++ A + AQL++LE + P ++I L
Sbjct: 9 VLPEFTERTSAGTRTSDPYSKLLQERIVFLGTPVDETSANDVTAQLMYLEHQAPDRDIEL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG TA AIYDTM+++ ++T C+GQA ++LL+AG G R ALP AR++L
Sbjct: 69 YVNSPGGSFTAMTAIYDTMRYVACDVATTCLGQAGPSAAVLLAAGTPGKRAALPGARVVL 128
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP + GQA D+ HA ++V+++ RL EI V++ G+T +V L+RD ++ A +A
Sbjct: 129 HQPALTEPVRGQAGDLAVHAAELVRVRARLEEILVRHTGRTPGQVAADLERDTVLDARQA 188
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G+VD+++ R S
Sbjct: 189 REYGLVDRIVPGRRTPPASS 208
>gi|325066964|ref|ZP_08125637.1| Endopeptidase Clp [Actinomyces oris K20]
Length = 224
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 141/211 (66%), Gaps = 6/211 (2%)
Query: 3 FEGCAKK---DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
FE A++ + + ++P E+T G + D Y++L ++RIVF+ Q++D A I
Sbjct: 8 FEAIARQAGAMPQARY--VLPQFEERTAYGFKRQDPYAKLFEDRIVFMGVQVDDASADDI 65
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LE+++P I++YINSPGG TA AIYDTMQ+IKP + T C+GQAAS ++LL
Sbjct: 66 MAQLLVLESQDPDGLITMYINSPGGSFTALTAIYDTMQYIKPQVQTVCLGQAASAAAVLL 125
Query: 120 SAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+AG +G R ALPNAR+L+HQP+ GQASDIE A +I +++ L + + G+ E
Sbjct: 126 AAGSEGKRLALPNARVLIHQPAMEGVQGQASDIEIVANEIDRMRSWLEDTLAAHTGRDRE 185
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ L+RD I++A++A ++G+VD+VL SR
Sbjct: 186 KIHADLERDKILTAADAKEYGIVDQVLTSRK 216
>gi|302865150|ref|YP_003833787.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
gi|302568009|gb|ADL44211.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
Length = 196
Score = 189 bits (480), Expect = 2e-46, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q G+R ++ RLLKERI+F+ ++ D A ICAQ+L L AE+ +++I LYINSPGG
Sbjct: 11 QPAFGDR---VFERLLKERIIFLGTEVTDASANQICAQILLLAAEDAERDIFLYINSPGG 67
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMA+YDTM+++K ++T +G A SMG LL AG G RFALP++RI++HQPSGG
Sbjct: 68 SVSAGMAVYDTMRYVKNDVATLALGMAGSMGQFLLCAGAAGKRFALPHSRIMMHQPSGGM 127
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+DI A++++ +KR + E+ ++ G+T EE+++ DRD +A +A ++G+VD+V
Sbjct: 128 GGTAADITIQAENMLHVKRTMQELIAQHSGRTLEEIQRDWDRDRWFTAEQAREYGLVDQV 187
Query: 205 LMS 207
L
Sbjct: 188 LTR 190
>gi|319440931|ref|ZP_07990087.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
variabile DSM 44702]
Length = 203
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/176 (50%), Positives = 125/176 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ Q++D +A +CAQ+L L AE+P+++ISLYINSPGG VTAGMAI+D
Sbjct: 27 VFERLLRERIIFLGTQVDDEIANKLCAQILLLSAEDPERDISLYINSPGGSVTAGMAIFD 86
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF ++T+ MG AASMG LLSAG G R+ALP+ARI++HQPS G G ASDI
Sbjct: 87 TMQFAPCDVATYSMGLAASMGQFLLSAGAPGKRYALPHARIMMHQPSAGVGGTASDIAIQ 146
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ ++K+ + + ++ G++ E + K DRD A EA ++G+VD V+ S D
Sbjct: 147 AEQFGEVKKEMAALIAEHTGQSVETIRKDSDRDRWFKAQEAKEYGLVDHVISSLKD 202
>gi|227488326|ref|ZP_03918642.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glucuronolyticum ATCC 51867]
gi|227091736|gb|EEI27048.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glucuronolyticum ATCC 51867]
Length = 187
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 89/173 (51%), Positives = 124/173 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERI+F+ ++ D +A +CAQ+L L AE+P ++ISLYINSPGG VTAGMAIYD
Sbjct: 7 VYERLLRERIIFLGSEVNDEIANKLCAQILLLSAEDPTRDISLYINSPGGSVTAGMAIYD 66
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++ ++T+ MG AASMG LL+AG KG R+ALP+ARIL+HQPS G G ASDI
Sbjct: 67 TMKYAPCDVATYAMGLAASMGQFLLTAGTKGKRYALPHARILMHQPSAGVGGTASDIAIQ 126
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ K+ ++E+ ++ G+T+E++ K DRD +A EA D+G+ D V+
Sbjct: 127 AQQFALTKKEMDELIAEHSGQTFEQISKDSDRDRWFTAEEARDYGLCDHVISH 179
>gi|302534406|ref|ZP_07286748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
gi|302443301|gb|EFL15117.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
Length = 205
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 93/193 (48%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L P + + G D +Y+RLL ERI+F+ Q++D +A I AQLL L AE P+K
Sbjct: 1 MTNLKPYAAGEPSIGGGLGDHVYNRLLGERIIFLGQQVDDDIANKITAQLLLLAAE-PEK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTPGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ AQ +++ K+R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAQYLLRTKQRMAEITAHHSGQTVEAIIRDGDRDRWFTAE 179
Query: 194 EACDWGVVDKVLM 206
EA D+G++D+++
Sbjct: 180 EAKDYGLIDEIIS 192
>gi|239917500|ref|YP_002957058.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
gi|281414010|ref|ZP_06245752.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
gi|289705667|ref|ZP_06502052.1| Clp protease [Micrococcus luteus SK58]
gi|239838707|gb|ACS30504.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
gi|289557615|gb|EFD50921.1| Clp protease [Micrococcus luteus SK58]
Length = 221
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 132/193 (68%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RIVF+ Q++D A + AQLL LEA + +++I+L
Sbjct: 23 ILPQFEERTPYGFKRQDPYAKLFEDRIVFLGAQVDDASADDVMAQLLVLEAMDSERDITL 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQFI+P + T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 83 YINSPGGSFTAMTAIYDTMQFIRPEVQTVCLGQAASAAAVLLAAGAPGKRLALPNARVLI 142
Query: 138 HQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ A+D+E HAQ+I +++ + E +T EEV + +DRD +SA +A
Sbjct: 143 HQPAMQGDRGTATDLEIHAQEINRMRVWMEETLASLTNRTPEEVSQDIDRDKFLSAEQAL 202
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL SR
Sbjct: 203 EYGLVDEVLASRK 215
>gi|315501699|ref|YP_004080586.1| endopeptidase clp [Micromonospora sp. L5]
gi|315408318|gb|ADU06435.1| Endopeptidase Clp [Micromonospora sp. L5]
Length = 196
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q G+R ++ RLLKERI+F+ ++ D A ICAQ+L L AE+ +++I LYINSPGG
Sbjct: 11 QPAFGDR---VFERLLKERIIFLGTEVTDASANQICAQILLLAAEDAERDIFLYINSPGG 67
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V+AGMA+YDTM+++K ++T +G A SMG LL AG G RFALP++RI++HQPSGG
Sbjct: 68 SVSAGMAVYDTMRYVKNDVATLALGMAGSMGQFLLCAGAAGKRFALPHSRIMMHQPSGGM 127
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+DI A++++ +KR + E+ ++ G+T EE+++ DRD +A +A ++G+VD+V
Sbjct: 128 GGTAADITIQAENMLHVKRTMQELIAQHSGRTLEEIQRDWDRDRWFTAEQAREYGLVDQV 187
Query: 205 LMS 207
L
Sbjct: 188 LTR 190
>gi|116072309|ref|ZP_01469576.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064831|gb|EAU70590.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 184
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/182 (49%), Positives = 132/182 (72%), Gaps = 1/182 (0%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER DIY+RL ERI+F+ ++ D +A + AQ+L+L++E+ K I LYINSPGG VTAG
Sbjct: 2 ERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAG 61
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF-SGQA 148
+AI+DT+Q++K + T C+G AASMG+ LL+AG KG R ALP++RI++HQP GG QA
Sbjct: 62 LAIFDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQA 121
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
SDIE A++I+++K LN G+T+E++EK DRD+ +SA EA D+G++D+V+
Sbjct: 122 SDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLSAQEAMDYGLIDRVISHP 181
Query: 209 ID 210
+
Sbjct: 182 NE 183
>gi|317124504|ref|YP_004098616.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Intrasporangium calvum DSM 43043]
gi|315588592|gb|ADU47889.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Intrasporangium calvum DSM 43043]
Length = 217
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 93/201 (46%), Positives = 139/201 (69%), Gaps = 4/201 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P E+T+ G + D Y++L ++RI+F+ Q++D A I AQLL LE+ +
Sbjct: 14 PQSRY--ILPQFEERTSYGMKRSDPYNKLFEDRIIFLGVQVDDASADDIIAQLLVLESLD 71
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I +YINSPGG TA AIYDTMQF++P I TF +GQAAS ++LL AG G RFAL
Sbjct: 72 PDRDILMYINSPGGSFTAMTAIYDTMQFVRPDIQTFVIGQAASAAAVLLGAGAPGKRFAL 131
Query: 131 PNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PNARIL+HQP SGG GQASDIE A ++++++ L + + G+T E+V ++RD
Sbjct: 132 PNARILIHQPALSGGDYGQASDIEIQANEVLRMRTWLEDTLAHHTGRTSEQVRNDIERDK 191
Query: 189 IMSASEACDWGVVDKVLMSRI 209
I+S+ +A ++G++D+VL SR
Sbjct: 192 ILSSDDAKEYGLIDEVLASRK 212
>gi|297626026|ref|YP_003687789.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296921791|emb|CBL56351.1| ATP-dependent Clp protease proteolytic subunit 1 (Endopeptidase Clp
1) [Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 211
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 87/201 (43%), Positives = 125/201 (62%), Gaps = 1/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
++P + G D +Y LL RIVF+ +++D + ICAQ+L L AE+P ++
Sbjct: 7 NPVLPSLAAGGASGFGLSDNVYQSLLANRIVFLGSEVKDENSNAICAQMLLLNAEDPHRD 66
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG + +GMAIYDTMQ+I ++T +G AASMG LLS G KG RFALP+AR
Sbjct: 67 IYLYINSPGGSIDSGMAIYDTMQWISNDVATVALGLAASMGQFLLSGGAKGKRFALPHAR 126
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL+HQPSGG G ASD++ A+ + +K + + + G+T E++EK DRD +A +
Sbjct: 127 ILMHQPSGGIGGTASDVKIQAEQSIHLKHEMAALIAGHTGQTVEQIEKDSDRDRWFTAQQ 186
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G +D V I +
Sbjct: 187 ALEYGFIDHVYERASKISDTD 207
>gi|118473678|ref|YP_888935.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118174965|gb|ABK75861.1| Clp protease [Mycobacterium smegmatis str. MC2 155]
Length = 218
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
A+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 10 ARLQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 67
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G
Sbjct: 68 ESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 127
Query: 127 RFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNAR+L+HQP SG GQ SD+E A +I +++ + ++ GK ++ K
Sbjct: 128 RLALPNARVLIHQPALSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDPAQIRKDT 187
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A EA ++G++D VL R
Sbjct: 188 DRDKILTAEEAKEYGIIDTVLQYRK 212
>gi|320103932|ref|YP_004179523.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
gi|319751214|gb|ADV62974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Isosphaera
pallida ATCC 43644]
Length = 252
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 82/178 (46%), Positives = 125/178 (70%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
+R + LL+ RI+F+ G I++ +A + Q L+L+ EN + IS YINSPGG V +
Sbjct: 35 QRQMTLSDLLLENRIIFLEGPIDNVIANHLIKQFLYLQFENRTQGISFYINSPGGSVYST 94
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+A+YDTMQF+ PI+T+C+G AAS ++LL+ G KG RF+LP+++I++HQPSG GQ S
Sbjct: 95 LAVYDTMQFVNCPIATYCIGMAASGAAVLLAGGTKGKRFSLPHSKIMIHQPSGYVGGQVS 154
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+K K+ +NEI K+ G+ YE + K +RD ++A+EA ++G+VD+VL
Sbjct: 155 DIEIQADEILKNKKLINEILAKHTGQPYERIAKDTERDRYLTAAEAKEYGLVDEVLSK 212
>gi|119961335|ref|YP_948115.1| ATP-dependent Clp protease proteolytic subunit [Arthrobacter
aurescens TC1]
gi|119948194|gb|ABM07105.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Arthrobacter aurescens TC1]
Length = 219
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 93/210 (44%), Positives = 141/210 (67%), Gaps = 4/210 (1%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F A + ++P E+T G + D Y++L ++RI+F+ Q++D A I A
Sbjct: 4 NFGWSAGNLPSSRY--VLPQFEERTPYGFKRQDPYTKLFEDRIIFLGVQVDDASADDIMA 61
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL LE+ +P ++I+LYINSPGG TA AIYDTMQ+I+P I T C+GQAAS ++LL+A
Sbjct: 62 QLLVLESTDPDRDITLYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAAAVLLAA 121
Query: 122 GEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
G G R ALPNAR+L+HQP SGG GQASD+E A ++++++ L + + G+T E+
Sbjct: 122 GTPGKRLALPNARVLIHQPALSGGQGGQASDLEIQAAEVMRMRTWLEDTLAHHSGRTSEQ 181
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V ++RD I++A++A +G++D+VL SR
Sbjct: 182 VNNDIERDKILTAADALSYGLIDQVLDSRK 211
>gi|255583777|ref|XP_002532641.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223527632|gb|EEF29744.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 334
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 83/197 (42%), Positives = 125/197 (63%), Gaps = 8/197 (4%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S +P E D + LL++RI+F+ Q++D A + +QLLFL+AE
Sbjct: 76 SSFATSSPALPRFEE--------LDTTNMLLRQRIIFLGSQVDDMTADFVISQLLFLDAE 127
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P K+I L+INSPGG VTAG+ IYD M+ K +ST C+G AASMG+ LL+AG KG RF
Sbjct: 128 DPTKDIKLFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLAAGTKGKRFC 187
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
+PN R+++HQP G G+A+++ +++ K +LN+I + GK E++E DRD+
Sbjct: 188 MPNGRVMIHQPLGTAGGKATEMSIRIREMNYHKIKLNKILSRATGKPVEQIEVDTDRDNF 247
Query: 190 MSASEACDWGVVDKVLM 206
MSA EA ++G++D V+
Sbjct: 248 MSAWEAKEYGLIDVVID 264
>gi|120404993|ref|YP_954822.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
vanbaalenii PYR-1]
gi|119957811|gb|ABM14816.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP2
peptidase, Serine peptidase, MEROPS family S14
[Mycobacterium vanbaalenii PYR-1]
Length = 212
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 85/205 (41%), Positives = 135/205 (65%), Gaps = 4/205 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 4 PRLQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 61
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G
Sbjct: 62 ESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 121
Query: 127 RFALPNARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNARIL+HQP+ G GQ SD+E A +I +++ + E ++ GK ++ K
Sbjct: 122 RMALPNARILIHQPALGGVIQGQFSDLEIQAAEIERMRTLMEETLARHTGKDAAQIRKDT 181
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A +A ++G++D VL R
Sbjct: 182 DRDKILTAEQAKEYGIIDTVLEYRK 206
>gi|170016746|ref|YP_001727665.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc
citreum KM20]
gi|259585959|sp|B1MXG9|CLPP_LEUCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|169803603|gb|ACA82221.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leuconostoc
citreum KM20]
Length = 200
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 100/198 (50%), Positives = 132/198 (66%), Gaps = 2/198 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RIV V G++ED MAT I AQLLFLEA++P KEIS+YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIVLVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG++I DTM FIK P++T MG AASMG+++ S+GEKG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLSITDTMNFIKAPVTTIVMGLAASMGTIIASSGEKGHRFMLPNAEYLIHQ 122
Query: 140 PSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ A+ + K + +LN+I + E + + +RDH MSA E
Sbjct: 123 PMGGAVGGTQQTDMAIIAEQLTKTRDKLNKILADASDRDLETIARDTERDHWMSAEETLA 182
Query: 198 WGVVDKVLMSRIDIEEKS 215
+G +D +L +
Sbjct: 183 YGFIDGILTKSGEKPTTK 200
>gi|229817802|ref|ZP_04448084.1| hypothetical protein BIFANG_03078 [Bifidobacterium angulatum DSM
20098]
gi|229785591|gb|EEP21705.1| hypothetical protein BIFANG_03078 [Bifidobacterium angulatum DSM
20098]
Length = 215
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 87/208 (41%), Positives = 140/208 (67%), Gaps = 1/208 (0%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F A++ + ++P E+T G ++ D YSRL ++RI+F+ Q++D A I AQ
Sbjct: 8 FVARAQRLAGPTNRYVMPQFSEKTPYGMKTMDAYSRLFEDRIIFLGVQVDDTSADDIMAQ 67
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+++P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG
Sbjct: 68 LLVLESQDPNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAG 127
Query: 123 EKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
+G R LPNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E +
Sbjct: 128 AEGKRLMLPNARVLIHQPAIDQGFGKATEIEIQAREMLRMREWLENTLAKHTGQPVERIR 187
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
K ++ D ++ASEA ++G+VD+VL R
Sbjct: 188 KDIEVDTFLTASEAKEYGIVDEVLEHRQ 215
>gi|298714280|emb|CBJ27396.1| chloroplast clp protease P [Ectocarpus siliculosus]
Length = 264
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 132/191 (69%), Gaps = 4/191 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V E G D+ SRLLK+RI+ + ++ D + ++ AQLL+L ++P+K+I+LY
Sbjct: 66 MPTVGE----GSEQMDVMSRLLKDRILLLGQEVNDEVGNVLVAQLLYLANDDPEKDITLY 121
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AG+AIYDTMQFI ++T C G AASMG+ LL AG G R +LPN+RI++H
Sbjct: 122 INSPGGSVSAGLAIYDTMQFIPCDVATVCFGMAASMGAFLLGAGSAGKRKSLPNSRIMIH 181
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG +GQA+DIE A++I+ KR LN + + +++E+ DRD M+ EA ++
Sbjct: 182 QPLGGAAGQAADIEIQAKEILFTKRLLNGYMSEYTDQPADKIEEDTDRDFFMTPIEAMEY 241
Query: 199 GVVDKVLMSRI 209
G++D+V+ ++
Sbjct: 242 GLIDEVIKTKT 252
>gi|262341363|ref|YP_003284218.1| ATP-dependent Clp protease, proteolytic subunit 2 [Blattabacterium
sp. (Blattella germanica) str. Bge]
gi|262272700|gb|ACY40608.1| ATP-dependent Clp protease, proteolytic subunit 2 [Blattabacterium
sp. (Blattella germanica) str. Bge]
Length = 237
Score = 189 bits (479), Expect = 3e-46, Method: Composition-based stats.
Identities = 88/197 (44%), Positives = 134/197 (68%)
Query: 14 VFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
+ + P +VE+ D++SRL+ +R++F+ IED +A ++ AQLLFL++ + K
Sbjct: 40 IIQSMTPYIVEERKLNVAQMDVFSRLMMDRVIFLGTPIEDQVANIVQAQLLFLQSVDSVK 99
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I +YINSPGG V AG+ IYDTMQ ++P +ST C G AASM ++LL AG K R AL ++
Sbjct: 100 DIQIYINSPGGDVYAGLGIYDTMQIVEPDVSTICTGMAASMAAVLLCAGVKNKRSALKHS 159
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GG GQASDIE ++I+K+K+ L EI K+ G E++E DRD+ M++
Sbjct: 160 RIMIHQPIGGTQGQASDIEITVREILKLKKELYEIISKHSGVPIEKIEIDSDRDYWMTSQ 219
Query: 194 EACDWGVVDKVLMSRID 210
EA ++G++D+VL +
Sbjct: 220 EAKEYGMIDEVLEGKRK 236
>gi|149275732|ref|ZP_01881877.1| ATP-dependent Clp protease proteolytic subunit 2 [Pedobacter sp.
BAL39]
gi|149233160|gb|EDM38534.1| ATP-dependent Clp protease proteolytic subunit 2 [Pedobacter sp.
BAL39]
Length = 233
Score = 188 bits (478), Expect = 3e-46, Method: Composition-based stats.
Identities = 90/189 (47%), Positives = 135/189 (71%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I D A +I AQLLFL++ + Q++I
Sbjct: 36 SMTPYIIEERQLNVAQMDVFSRLMMDRIIFLGDAIYDGNANIIQAQLLFLQSTDNQRDIQ 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ+I P ++T C G AASMG++LL AG KG R ALP++R++
Sbjct: 96 IYINSPGGSVYAGLGIYDTMQYISPDVATICTGMAASMGAVLLVAGAKGKRAALPHSRVM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASD+E + ++++K+K+ L +I + G++YE VEK DRD+ M A EA
Sbjct: 156 IHQPSGGAQGVASDMEINLREMLKLKKELYDIISNHSGQSYEWVEKASDRDYWMKADEAK 215
Query: 197 DWGVVDKVL 205
+G++D+VL
Sbjct: 216 SFGMIDEVL 224
>gi|297162278|gb|ADI11990.1| ATP-dependent Clp protease, protease subunit [Streptomyces
bingchenggensis BCW-1]
Length = 211
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 87/194 (44%), Positives = 130/194 (67%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YS+LL ERIVF+ Q++D A + AQL+ LE +P ++ISL
Sbjct: 9 VLPEFTERTSNGVRTMDPYSKLLSERIVFLGTQVDDTSANDVIAQLVHLEHASPDQDISL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +A AIYDTM F+ + T C+GQAAS ++LL+AG G RFALP AR+L+
Sbjct: 69 YINSPGGSFSAMTAIYDTMHFVTCDVETICLGQAASAAAVLLAAGTPGKRFALPGARVLI 128
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQPS G SD+E A+++++ + L E+ V++ G+T E + ++RD I +A +A
Sbjct: 129 HQPSFSEPIQGTTSDLELQAKEMLRTRALLEELLVRHTGQTAERIRSDIERDKIFNAEDA 188
Query: 196 CDWGVVDKVLMSRI 209
+G+VD++ SR
Sbjct: 189 VSYGLVDRLTQSRK 202
>gi|320094140|ref|ZP_08025953.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 178 str. F0338]
gi|319978942|gb|EFW10472.1| ATP-dependent Clp protease proteolytic subunit [Actinomyces sp.
oral taxon 178 str. F0338]
Length = 201
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 124/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLLKERI+++ G++ D A ICAQLL L AE+P ++I LYINSPGG VTAGMA+YD
Sbjct: 18 VYQRLLKERIIWLGGEVRDENANTICAQLLLLAAEDPDRDIYLYINSPGGSVTAGMAVYD 77
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG G R+ P+ R+LLHQP GG G A++I +
Sbjct: 78 TMQYIKPDVVTVGMGLAASMGQFLLTAGAPGKRYITPHTRVLLHQPLGGAGGSATEIRIN 137
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A I+ +K+ L EI + GK+ E++E DRDH +A EA ++G VD+++ +I
Sbjct: 138 ADLILGMKKELAEITAQRTGKSVEQIEADADRDHWFTAREALEYGFVDQLIEGPQEI 194
>gi|302760453|ref|XP_002963649.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
gi|302785934|ref|XP_002974738.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300157633|gb|EFJ24258.1| hypothetical protein SELMODRAFT_57153 [Selaginella moellendorffii]
gi|300168917|gb|EFJ35520.1| hypothetical protein SELMODRAFT_67117 [Selaginella moellendorffii]
Length = 235
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 87/178 (48%), Positives = 125/178 (70%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
ER + ++L + RI+ G ++D MA LI AQLL+L+A +P+K+I +Y+NSPGG VTAG
Sbjct: 48 ERFQSVITQLFQHRIIRCGGAVDDDMANLIVAQLLYLDAADPKKDIVMYVNSPGGSVTAG 107
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MA++DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQP GG GQ S
Sbjct: 108 MAVFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQQS 167
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+ K LN + G+ E + + DRD MS EA ++G++D V+ +
Sbjct: 168 DIEIQANEILHHKANLNSYLSYHTGQPLERIIQDTDRDFFMSPKEAQEYGLIDGVISN 225
>gi|312140360|ref|YP_004007696.1| clp peptidase proteolytic subunit 2 clpp2 [Rhodococcus equi 103S]
gi|325676030|ref|ZP_08155713.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC
33707]
gi|311889699|emb|CBH49016.1| Clp peptidase proteolytic subunit 2 ClpP2 [Rhodococcus equi 103S]
gi|325553268|gb|EGD22947.1| ATP-dependent Clp protease, protease subunit [Rhodococcus equi ATCC
33707]
Length = 223
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +E ++ G + + Y++L +ERI+F+ Q++D A + AQLL LE+ +P ++I++
Sbjct: 26 ILPSFIEHSSYGVKESNPYNKLFEERIIFLGVQVDDASANDVMAQLLVLESLDPDRDITM 85
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ MAIYDTMQ+++ I+T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 86 YINSPGGSFTSLMAIYDTMQYVRADITTVCLGQAASAAAVLLAAGTPGKRLALPNARVLI 145
Query: 138 HQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G GQ SD+E A +I +++R + K+ GK + + K DRD I++A EA
Sbjct: 146 HQPATGGIQGQVSDLEIQAAEIERMRRLMETTLGKHTGKDPDVIRKDTDRDKILTAEEAK 205
Query: 197 DWGVVDKVLMSRI 209
++G++D VL R
Sbjct: 206 EYGIIDDVLQYRK 218
>gi|282860204|ref|ZP_06269278.1| Clp protease [Prevotella bivia JCVIHMP010]
gi|282587025|gb|EFB92256.1| Clp protease [Prevotella bivia JCVIHMP010]
Length = 221
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 89/192 (46%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDSGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASMG++LL AG +G R ALP++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMGAVLLVAGAEGKRSALPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + +++E+V DR++ M+A EA
Sbjct: 150 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISNHSHQSFEKVWNDSDRNYWMTADEAKA 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VL+ +
Sbjct: 210 YGMIDEVLIRKK 221
>gi|300780630|ref|ZP_07090485.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
gi|300533616|gb|EFK54676.1| endopeptidase Clp [Corynebacterium genitalium ATCC 33030]
Length = 206
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 142/210 (67%), Gaps = 8/210 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MSF+ + ++P +EQ++ G + + YS+L +ERI+F+ Q++D A I
Sbjct: 1 MSFQMPNSRY-------VLPSFIEQSSYGTKETNPYSKLFEERIIFLGTQVDDTSANDIM 53
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+++P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS +++L+
Sbjct: 54 AQLLVLESQDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVILA 113
Query: 121 AGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R ALPN+R+L+HQP+ GQ SD+E AQ+I +++R + E ++ G+T E+
Sbjct: 114 AGAPGKRAALPNSRVLIHQPATQGTQGQVSDLEIQAQEIERMRRLMEETLARHSGRTAEQ 173
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V DRD I++A EA ++G++D+V R
Sbjct: 174 VRIDTDRDKILTAEEAVEYGIIDQVFDYRK 203
>gi|296394282|ref|YP_003659166.1| endopeptidase Clp [Segniliparus rotundus DSM 44985]
gi|296181429|gb|ADG98335.1| Endopeptidase Clp [Segniliparus rotundus DSM 44985]
Length = 210
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 91/200 (45%), Positives = 134/200 (67%), Gaps = 3/200 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP +E T+ G + + Y++L +ERI+F+ Q++D A I AQLL LE+ +P ++I++
Sbjct: 11 IVPSFIEHTSTGVKETNPYTKLFEERIIFLGTQVDDTSANDIMAQLLVLESLDPDRDITI 70
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ MAIYDTMQF+ I+T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 71 YINSPGGSFTSLMAIYDTMQFVHCDIATVCLGQAASAAAVLLAAGTPGKRAALPNARVLI 130
Query: 138 HQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
HQP GQA+D+E A +I +++R + E ++ GKT +EV K DRD I++A E
Sbjct: 131 HQPRIEGGAIRGQATDLEIQAAEIERMRRLMEETLSRHTGKTADEVRKDTDRDKILTAQE 190
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A D+G++D V R +
Sbjct: 191 AKDYGIIDSVYPYRKKSAKN 210
>gi|294672820|ref|YP_003573436.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prevotella
ruminicola 23]
gi|294471657|gb|ADE81046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Prevotella
ruminicola 23]
Length = 192
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 90/192 (46%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLLFL++ +P K+IS+
Sbjct: 1 MNPYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLFLDSTDPGKDISI 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASMG++LL AG +G R ALP++R+++
Sbjct: 61 YINSPGGSVTAGLGIYDTMQFITSDVATICTGMAASMGAVLLVAGAEGKRSALPHSRVMI 120
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K+ L I ++ Y++V DR++ M+A EA
Sbjct: 121 HQPLGGVQGQASDIEIEAKEILKFKKELYTIISEHSHTPYDKVYADSDRNYWMTAEEAKA 180
Query: 198 WGVVDKVLMSRI 209
+G++D+VL+ +
Sbjct: 181 YGMIDEVLIRKK 192
>gi|329957343|ref|ZP_08297863.1| endopeptidase Clp [Bacteroides clarus YIT 12056]
gi|328523056|gb|EGF50159.1| endopeptidase Clp [Bacteroides clarus YIT 12056]
Length = 220
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 132/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + ++++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTSFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+V +
Sbjct: 210 YGMIDQVYTKK 220
>gi|288800853|ref|ZP_06406310.1| Clp protease [Prevotella sp. oral taxon 299 str. F0039]
gi|288332314|gb|EFC70795.1| Clp protease [Prevotella sp. oral taxon 299 str. F0039]
Length = 222
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 132/192 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ I+D+ A + AQLL+L++ + K+IS+
Sbjct: 31 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTPIDDYTANTLQAQLLYLDSVDSGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G +G R ALP+ R+++
Sbjct: 91 YINSPGGSVTAGLGIYDTMQFITSDVATICTGMAASMAAVLLVSGAEGKRSALPHGRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K+K+ L I + +++V + DR++ M+A EA +
Sbjct: 151 HQPLGGVQGQASDIEIEAREIIKMKKELYTIISDHSHTPFDKVWQDSDRNYWMTAEEAKE 210
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 211 YGMIDTVLKRKK 222
>gi|15677178|ref|NP_274331.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis MC58]
gi|7226553|gb|AAF41687.1| ATP-dependent Clp protease, proteolytic subunit [Neisseria
meningitidis MC58]
Length = 176
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 101/175 (57%), Positives = 134/175 (76%), Gaps = 2/175 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+KERIVF+ G + D A L+ AQLLFLE+ENP K+I YINSPGG VTAGM+IYDTM FI
Sbjct: 1 MKERIVFLVGPVTDESANLVVAQLLFLESENPDKDIFFYINSPGGSVTAGMSIYDTMNFI 60
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG--FSGQASDIERHAQD 157
KP +ST C+GQAASMG+ LLSAGEKG RFALPN+RI++HQP GQASDIE HA++
Sbjct: 61 KPDVSTLCLGQAASMGAFLLSAGEKGKRFALPNSRIMIHQPLISGGLGGQASDIEIHARE 120
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++KIK +LN + K+C + ++E+ DRD+ MSA EA ++G++D++L +R +
Sbjct: 121 LLKIKEKLNRLMAKHCDRDLADLERDTDRDNFMSAEEAKEYGLIDQILENRASLR 175
>gi|323456646|gb|EGB12512.1| hypothetical protein AURANDRAFT_70482 [Aureococcus anophagefferens]
Length = 1031
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 127/186 (68%), Gaps = 3/186 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V T D+ SRLLK+RI+ + ++ D +A ++ AQ+L+L E+P+ +I+L
Sbjct: 57 IMPTV---TGANGEQIDVVSRLLKDRILLLGSEVNDEVANVLVAQMLYLANEDPEGDITL 113
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AGMAIYDTMQFI +ST C G AASMG+ LL AG KG R +LPNARI++
Sbjct: 114 YINSPGGSVSAGMAIYDTMQFIPCDVSTVCFGMAASMGAFLLGAGSKGKRKSLPNARIMI 173
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQA+DIE A++I+ K +N + G+ +++ + DRD M +EA D
Sbjct: 174 HQPLGGAQGQAADIEIQAKEILFTKACINTYMSEYTGQPIDKLAEDTDRDFYMMPTEAQD 233
Query: 198 WGVVDK 203
+G++D+
Sbjct: 234 YGLIDE 239
>gi|323448447|gb|EGB04345.1| hypothetical protein AURANDRAFT_32730 [Aureococcus anophagefferens]
Length = 197
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 88/193 (45%), Positives = 126/193 (65%), Gaps = 3/193 (1%)
Query: 16 LGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + DIY+RL +ERI+F+ +I+D +A I +L+L++E+
Sbjct: 1 MPIGVPKVAYRVPGAPSADWIDIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYIN PGG V AG+AI+DTM IK + T +G +ASM S LL G KG R ALPN
Sbjct: 61 KPIYLYINCPGGSVIAGLAIFDTMNHIKSKVVTINIGLSASMASFLLCGGTKGSRLALPN 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+++HQP GG GQA DI+ A I++IK L ++Y G+T +++ LDRD+ MSA
Sbjct: 121 SRVMIHQPMGGAQGQAEDIKVEAAQIIRIKENLVKLYAMMTGQTQDQIILDLDRDNFMSA 180
Query: 193 SEACDWGVVDKVL 205
EACD+G++DKV+
Sbjct: 181 QEACDYGIIDKVI 193
>gi|118586974|ref|ZP_01544406.1| ATP-dependent Clp protease, proteolytic subunit [Oenococcus oeni
ATCC BAA-1163]
gi|45597799|emb|CAE54287.1| ClpP protease [Oenococcus oeni]
gi|118432596|gb|EAV39330.1| ATP-dependent Clp protease, proteolytic subunit [Oenococcus oeni
ATCC BAA-1163]
Length = 202
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 99/188 (52%), Positives = 132/188 (70%), Gaps = 2/188 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RI+ V G++ED MAT I AQLLFL+A++P K+I +YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDQMATSIVAQLLFLDAQDPNKDIYMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAI DTM FI+ + T MG AASM +++ S+G KG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGMAIVDTMNFIRSDVQTIVMGMAASMATIIASSGTKGKRFMLPNAEYLIHQ 122
Query: 140 PS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P G Q +D+ A ++K ++RLN I +N GK E++EK +RDH M + E D
Sbjct: 123 PMGGAGAGTQQTDMSIIADQLLKTRKRLNNILKENSGKPIEKIEKDTERDHWMDSKETLD 182
Query: 198 WGVVDKVL 205
+G++DK+L
Sbjct: 183 YGLIDKIL 190
>gi|239941128|ref|ZP_04693065.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces roseosporus NRRL 15998]
gi|239987606|ref|ZP_04708270.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces roseosporus NRRL 11379]
gi|291444569|ref|ZP_06583959.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
roseosporus NRRL 15998]
gi|291347516|gb|EFE74420.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
roseosporus NRRL 15998]
Length = 205
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 91/193 (47%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +YSRLL ERI+F+ Q++D +A I AQLL L A +P K
Sbjct: 1 MTNLMPYAAGEPSLGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQLLLLAA-DPDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGASGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ A+ +++ K R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAEYLLRTKTRMAEITAHHSGQTVETIIRDGDRDRWYTAE 179
Query: 194 EACDWGVVDKVLM 206
EA ++G++D+++
Sbjct: 180 EAKEYGLIDEIIT 192
>gi|212690529|ref|ZP_03298657.1| hypothetical protein BACDOR_00011 [Bacteroides dorei DSM 17855]
gi|237708014|ref|ZP_04538495.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
9_1_42FAA]
gi|237725286|ref|ZP_04555767.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
D4]
gi|265754199|ref|ZP_06089388.1| Clp protease [Bacteroides sp. 3_1_33FAA]
gi|212666878|gb|EEB27450.1| hypothetical protein BACDOR_00011 [Bacteroides dorei DSM 17855]
gi|229436552|gb|EEO46629.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides dorei
5_1_36/D4]
gi|229458000|gb|EEO63721.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
9_1_42FAA]
gi|263234908|gb|EEZ20463.1| Clp protease [Bacteroides sp. 3_1_33FAA]
Length = 223
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 86/194 (44%), Positives = 130/194 (67%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ K+IS+
Sbjct: 29 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVESGKDISI 88
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 89 YINSPGGSVYAGLGIYDTMQFINSDVATICTGMAASMAAVLLVAGTEGKRSALTHSRVMI 148
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 149 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 208
Query: 198 WGVVDKVLMSRIDI 211
+G++D+VL +
Sbjct: 209 YGMIDEVLSRKPAT 222
>gi|295838900|ref|ZP_06825833.1| Clp protease [Streptomyces sp. SPB74]
gi|302519066|ref|ZP_07271408.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
gi|197695452|gb|EDY42385.1| Clp protease [Streptomyces sp. SPB74]
gi|302427961|gb|EFK99776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
Length = 215
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 2/202 (0%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ + + L+P + G D +YSRLL ERI+F+ Q++D +A I AQ+L
Sbjct: 2 PSSRRAGGYVTNLMPSAAGEAFSGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQML 61
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L A +P K+I LYINSPGG VTAGMAIYDTMQ+I + T MG AASMG LL+ G
Sbjct: 62 LLAA-DPSKDIYLYINSPGGSVTAGMAIYDTMQYIPNDVITIGMGMAASMGQFLLTGGTP 120
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G RFALPN IL+HQ S G G ASDI+ A+ +++ K R+ EI ++ G+T E++ +
Sbjct: 121 GKRFALPNTDILMHQGSAGIGGTASDIKIQAEYLLRTKNRMAEITARHSGQTIEKIIRDG 180
Query: 185 DRDHIMSASEACDWGVVDKVLM 206
DRD +A EA D+G++D+++
Sbjct: 181 DRDRWFTAEEAKDYGLIDEIIT 202
>gi|288924566|ref|ZP_06418503.1| Clp protease [Prevotella buccae D17]
gi|315607428|ref|ZP_07882424.1| ATP-dependent Clp protease proteolytic subunit [Prevotella buccae
ATCC 33574]
gi|288338353|gb|EFC76702.1| Clp protease [Prevotella buccae D17]
gi|315250860|gb|EFU30853.1| ATP-dependent Clp protease proteolytic subunit [Prevotella buccae
ATCC 33574]
Length = 222
Score = 188 bits (478), Expect = 4e-46, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 136/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ +P K+IS+
Sbjct: 31 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSTDPGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG VTAG+ IYDTMQF+ ++T C G AASM ++LL AG++G R ALP++R+++
Sbjct: 91 YLNSPGGSVTAGLGIYDTMQFVSSDVATICTGMAASMAAVLLVAGKEGKRQALPHSRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ +++V + DR++ M+A EA +
Sbjct: 151 HQPLGGVQGQASDIEIEAKEIQKFKKELYNIISEHSHTPFDKVWQDSDRNYWMTADEAKE 210
Query: 198 WGVVDKVLMSRI 209
+G++D VL ++
Sbjct: 211 YGMIDMVLKNKA 222
>gi|219129357|ref|XP_002184857.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403642|gb|EEC43593.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 188
Score = 188 bits (477), Expect = 4e-46, Method: Composition-based stats.
Identities = 87/177 (49%), Positives = 128/177 (72%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D+ SRLLK+RI+ + ++D +A ++ AQLL+L E+P+K+I+LYINSPGG V+AGMAI
Sbjct: 1 MDVISRLLKDRILLLGQGVDDEVANVLVAQLLYLANEDPEKDITLYINSPGGSVSAGMAI 60
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YDTMQ++ +ST C G AASMG+ LL AG KG R ALPN+RI++HQP GG GQA+DIE
Sbjct: 61 YDTMQYVPCDVSTVCFGMAASMGAFLLGAGAKGKRRALPNSRIMIHQPLGGAQGQAADIE 120
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
A++I+ I+ LN + C + +++E DRD M+ EA ++G++D+V+ ++
Sbjct: 121 IQAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTPEEAVEYGIIDEVVKTKT 177
>gi|329962626|ref|ZP_08300574.1| endopeptidase Clp [Bacteroides fluxus YIT 12057]
gi|328529657|gb|EGF56555.1| endopeptidase Clp [Bacteroides fluxus YIT 12057]
Length = 220
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 88/191 (46%), Positives = 133/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIANHSHTDFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G+VD+VL+ +
Sbjct: 210 YGMVDEVLIKK 220
>gi|167765438|ref|ZP_02437551.1| hypothetical protein BACSTE_03828 [Bacteroides stercoris ATCC
43183]
gi|167697066|gb|EDS13645.1| hypothetical protein BACSTE_03828 [Bacteroides stercoris ATCC
43183]
Length = 220
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 132/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + ++++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTSFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D+V +
Sbjct: 210 YGMIDQVYTKK 220
>gi|150003037|ref|YP_001297781.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
vulgatus ATCC 8482]
gi|254883675|ref|ZP_05256385.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
4_3_47FAA]
gi|294775661|ref|ZP_06741169.1| Clp protease [Bacteroides vulgatus PC510]
gi|319642188|ref|ZP_07996848.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides sp.
3_1_40A]
gi|149931461|gb|ABR38159.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides
vulgatus ATCC 8482]
gi|254836468|gb|EET16777.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacteroides sp.
4_3_47FAA]
gi|294450505|gb|EFG18997.1| Clp protease [Bacteroides vulgatus PC510]
gi|317386174|gb|EFV67093.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides sp.
3_1_40A]
Length = 223
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 130/192 (67%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ K+IS+
Sbjct: 29 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVESGKDISI 88
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 89 YINSPGGSVYAGLGIYDTMQFINSDVATICTGMAASMAAVLLVAGTEGKRSALTHSRVMI 148
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 149 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTAQEAKE 208
Query: 198 WGVVDKVLMSRI 209
+G++D+VL +
Sbjct: 209 YGMIDEVLSRKP 220
>gi|50954515|ref|YP_061803.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|67460474|sp|Q6AFZ7|CLPP2_LEIXX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|50950997|gb|AAT88698.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 223
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 90/197 (45%), Positives = 135/197 (68%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F+ Q++D A I AQLL LE+++P ++I +
Sbjct: 23 ILPSFEERTAYGYKRQDPYAKLFEDRIIFLGVQVDDASADDIMAQLLVLESQDPDRDIVM 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P I T +GQAAS ++L +AG G R ALPNARIL+
Sbjct: 83 YINSPGGSFTAMTAIYDTMQYVRPQIQTVVLGQAASAAAVLTAAGAPGKRLALPNARILI 142
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQASDI + +I +++ L E VK+ +T E+V K ++RD+I+SA+EA
Sbjct: 143 HQPAVGEAGHGQASDILIQSNEINRMRAWLEETLVKHSSRTLEQVNKDIERDNILSATEA 202
Query: 196 CDWGVVDKVLMSRIDIE 212
+G++D+VL SR +
Sbjct: 203 LKYGLIDQVLTSRKTLP 219
>gi|300173717|ref|YP_003772883.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc
gasicomitatum LMG 18811]
gi|299888096|emb|CBL92064.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc
gasicomitatum LMG 18811]
Length = 200
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 99/195 (50%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P V+EQT G SYD+ SRLLK+RI+ V G++ED MAT I AQLLFLEA++P KEIS+YI
Sbjct: 3 PGVIEQTANGRESYDLPSRLLKDRIILVQGEVEDSMATSIVAQLLFLEAQDPTKEISMYI 62
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAG++I DTM FIK P++T MG AASMG+++ S+GEKG RF LPNA L+HQ
Sbjct: 63 NSPGGSVTAGLSITDTMNFIKAPVTTIVMGLAASMGTIIASSGEKGHRFMLPNAEYLIHQ 122
Query: 140 PSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P GG Q +D+ A + K + +LN+I K E + +RD+ MSA E
Sbjct: 123 PMGGAVGGTQQTDMAIIADQLTKTRAKLNKILADASDKDLETIAHDTERDNWMSAEETLA 182
Query: 198 WGVVDKVLMSRIDIE 212
+G +D +L +
Sbjct: 183 YGFIDGILSKAGEKP 197
>gi|307328456|ref|ZP_07607631.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
gi|306885868|gb|EFN16879.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
Length = 204
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 93/178 (52%), Positives = 126/178 (70%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ Q++D +A I AQLL L A +P K+I LYINSPGG ++AGMAIYD
Sbjct: 21 VYNRLLGERIIFLGQQVDDDIANKITAQLLLLAA-DPDKDIYLYINSPGGSISAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I+ + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 80 TMQYIQNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ ++ K+R+ E+ + G+T E++ + DRD SA EA ++G+VD V+ S +
Sbjct: 140 AERLLHTKKRMAELTSFHTGQTVEQIVRDSDRDRWFSAQEAKEYGLVDDVMTSASSVP 197
>gi|325104589|ref|YP_004274243.1| Endopeptidase Clp [Pedobacter saltans DSM 12145]
gi|324973437|gb|ADY52421.1| Endopeptidase Clp [Pedobacter saltans DSM 12145]
Length = 246
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 91/189 (48%), Positives = 137/189 (72%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I D A +I AQLLFL++ + +++I
Sbjct: 49 SMTPYIIEERQLNVAQMDVFSRLMMDRIIFLGDAIYDQNANIIQAQLLFLQSTDAKRDIQ 108
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFI P ++T C G AASMG++L+ AG KG R ALP+ARI+
Sbjct: 109 IYINSPGGSVYAGLGIYDTMQFISPDVATICTGMAASMGAVLMCAGAKGKRAALPHARIM 168
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G A+D+E + ++++K+K+ L +I K+ G++YE VE++ DRD+ M A EA
Sbjct: 169 IHQPSGGAQGVAADMEINLREMLKLKQELYDIISKHSGQSYEWVERSSDRDYWMKAEEAK 228
Query: 197 DWGVVDKVL 205
+G+VD+VL
Sbjct: 229 HYGMVDEVL 237
>gi|227874920|ref|ZP_03993072.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243]
gi|269976478|ref|ZP_06183463.1| Clp protease [Mobiluncus mulieris 28-1]
gi|306818244|ref|ZP_07451974.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris
ATCC 35239]
gi|227844497|gb|EEJ54654.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243]
gi|269935279|gb|EEZ91828.1| Clp protease [Mobiluncus mulieris 28-1]
gi|304648983|gb|EFM46278.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris
ATCC 35239]
Length = 230
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RIVF+ Q++D+ A + AQLL LE+++P I++
Sbjct: 34 ILPTFEERTAYGYKRQDPYAKLFEDRIVFLGEQVDDNSADDVMAQLLVLESQDPDSLITM 93
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+ G G R ALPNAR+L+
Sbjct: 94 YINSPGGSFTAMTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAGGSPGKRLALPNARVLI 153
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQA+D+ A++I +++ L E K+ G+T E++ + +DRD I++A++A
Sbjct: 154 HQPAIQGAQGQATDLAIIAEEIDRMRAWLEETLSKHSGRTLEQMHEDIDRDKILTAAQAK 213
Query: 197 DWGVVDKVLMSRI 209
++G++D+VL R
Sbjct: 214 EYGLIDQVLSPRK 226
>gi|326771854|ref|ZP_08231139.1| Clp protease [Actinomyces viscosus C505]
gi|326637987|gb|EGE38888.1| Clp protease [Actinomyces viscosus C505]
Length = 224
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 93/211 (44%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 FEGCAKK---DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
FE A++ + + ++P E+T G + D Y++L ++RIVF+ Q++D A I
Sbjct: 8 FEAIARQAGAMPQARY--VLPQFEERTAYGFKRQDPYAKLFEDRIVFMGVQVDDASADDI 65
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LE+++P I++YINSPGG TA AIYDTMQ+IKP + T C+GQAAS ++LL
Sbjct: 66 MAQLLVLESQDPDGLITMYINSPGGSFTALTAIYDTMQYIKPQVQTVCLGQAASAAAVLL 125
Query: 120 SAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+AG +G R ALPNAR+L+HQP+ GQASDIE A +I +++ L + + G+ E
Sbjct: 126 AAGSEGKRLALPNARVLIHQPAMEGMQGQASDIEIVANEIDRMRSWLEDTLAAHTGRDRE 185
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ L+RD I++A+ A ++G+VD+VL SR
Sbjct: 186 KIHADLERDKILTAAAAKEYGIVDQVLTSRK 216
>gi|302534405|ref|ZP_07286747.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
gi|302443300|gb|EFL15116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
Length = 221
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 137/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 25 VIPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 85 YINSPGGSFTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGTPGKRMALPNARVLI 144
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPSGG Q SD+E A +I++++ +L + K+ E++ ++RD I++A +A
Sbjct: 145 HQPSGGTGREQLSDLEIAANEILRMRDQLETMLAKHSSTPIEKIRDDIERDKILTAEDAL 204
Query: 197 DWGVVDKVLMSRI 209
+G++D+++ +R
Sbjct: 205 AYGLIDQIVSTRK 217
>gi|296123571|ref|YP_003631349.1| endopeptidase Clp [Planctomyces limnophilus DSM 3776]
gi|296015911|gb|ADG69150.1| Endopeptidase Clp [Planctomyces limnophilus DSM 3776]
Length = 227
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 124/183 (67%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
+R + LL+ RI+F+ G I D A LI +LLFL+AEN ++I Y+NSPGG VTA
Sbjct: 23 QRQMGLGDLLLENRIIFLDGPIHDASANLIVMKLLFLQAENRHQDIHFYVNSPGGSVTAT 82
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAIYDTMQF++ I+T+C+G AAS G+++L+ G KG R+ LP+ ++++HQP G GQ S
Sbjct: 83 MAIYDTMQFLQCDIATYCVGLAASGGAIVLAGGTKGKRYCLPHGKVMIHQPYGEVGGQVS 142
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE A+DI+ +R LNEI +C + E + + +RD+ M+A +A D+G+VD+VL +
Sbjct: 143 DIEIQARDILDTRRVLNEILAHHCNQPIEIIARDTERDYYMNAYQAKDYGIVDEVLSNPK 202
Query: 210 DIE 212
Sbjct: 203 KPP 205
>gi|294786960|ref|ZP_06752214.1| Clp protease [Parascardovia denticolens F0305]
gi|315226599|ref|ZP_07868387.1| ATP-dependent Clp protease proteolytic subunit [Parascardovia
denticolens DSM 10105]
gi|294485793|gb|EFG33427.1| Clp protease [Parascardovia denticolens F0305]
gi|315120731|gb|EFT83863.1| ATP-dependent Clp protease proteolytic subunit [Parascardovia
denticolens DSM 10105]
Length = 223
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 85/200 (42%), Positives = 137/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P E+T+ G + D YS+L ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 26 PQARY--VMPQFEERTSFGFKRSDPYSKLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 83
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ LYINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 84 PDRDVVLYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 143
Query: 131 PNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L E K+ G+ + + K ++ D I
Sbjct: 144 PNARVLIHQPAMGQDFGKATEIEIQAKELLRMREWLEETLAKHTGQEVDRIRKDIETDTI 203
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A +A ++G+VD VL R
Sbjct: 204 LTAQQALEYGMVDAVLEHRK 223
>gi|184200755|ref|YP_001854962.1| ATP-dependent Clp protease proteolytic subunit [Kocuria rhizophila
DC2201]
gi|183580985|dbj|BAG29456.1| ATP-dependent Clp protease proteolytic subunit [Kocuria rhizophila
DC2201]
Length = 220
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 90/208 (43%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
A + + ++P E+T G R + Y++L ++RI+F+ Q++D A I AQL
Sbjct: 5 HATAPQLPTSRY--VIPDFEERTPYGYRRQNPYTKLFEDRIIFLGVQVDDTSADDIMAQL 62
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+++P ++I++YINSPGG TA AIYDTMQ+I+P I T C+GQAAS S+LL+ G
Sbjct: 63 LVLESQDPDRDITMYINSPGGSFTAMTAIYDTMQYIRPEIQTVCLGQAASAASVLLAGGT 122
Query: 124 KGMRFALPNARILLHQPSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ GQASDIE A +I++++ L E + K E++
Sbjct: 123 PGKRLALPNARVLIHQPAMEGQGGGQASDIEIQANEIMRMRTWLEETMALHTNKNVEDIN 182
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ ++RD I++A EA ++G++D+VL SR
Sbjct: 183 RDIERDKILTAKEAQEYGIIDQVLDSRK 210
>gi|256396400|ref|YP_003117964.1| ATP-dependent Clp protease proteolytic subunit [Catenulispora
acidiphila DSM 44928]
gi|256362626|gb|ACU76123.1| Endopeptidase Clp [Catenulispora acidiphila DSM 44928]
Length = 214
Score = 188 bits (477), Expect = 5e-46, Method: Composition-based stats.
Identities = 96/206 (46%), Positives = 136/206 (66%), Gaps = 1/206 (0%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ E +VP E+T+ G R +D YS+L ERI+F+ QI+D A + AQL+
Sbjct: 4 MQYRGPEHDARYIVPKFSERTSYGFREWDPYSKLFDERIIFLGVQIDDASANDVMAQLIT 63
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE+ +P ++IS+YINSPGG TA AIYDTM ++KP I T CMGQAAS ++LL+AG G
Sbjct: 64 LESMDPDRDISIYINSPGGSFTALTAIYDTMMWVKPDIQTVCMGQAASAAAVLLAAGTPG 123
Query: 126 MRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNARIL+HQP G SD+E A +I++++ + ++ K+ G+ E V K +
Sbjct: 124 KRLALPNARILIHQPWSEGGRGDLSDLEIQANEILRMRTVMEQMLSKHSGREPELVHKDI 183
Query: 185 DRDHIMSASEACDWGVVDKVLMSRID 210
DRD I+SA EA D+G++D+VL SR +
Sbjct: 184 DRDKILSADEAKDYGIIDQVLTSRTE 209
>gi|68535617|ref|YP_250322.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
jeikeium K411]
gi|109878267|sp|Q4JWV3|CLPP2_CORJK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|68263216|emb|CAI36704.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
jeikeium K411]
Length = 209
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 1 MSEMQMPEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G
Sbjct: 61 EGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGK 120
Query: 127 RFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNAR+L+HQP+ G GQ SD+E A++I ++++ + E ++ GK+ E+V D
Sbjct: 121 RAALPNARVLIHQPATGGVQGQVSDLEIQAKEIERMRKLMEETLARHTGKSAEQVRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G+VD+V R
Sbjct: 181 RDKILTAEEAKEYGIVDQVFDYRK 204
>gi|257055262|ref|YP_003133094.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Saccharomonospora viridis DSM 43017]
gi|256585134|gb|ACU96267.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Saccharomonospora viridis DSM 43017]
Length = 197
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 93/181 (51%), Positives = 118/181 (65%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERIV + ++ D +A I AQLL L AE+P +I YINSPGG VTAG AIYD
Sbjct: 17 VYERLLQERIVVLGSEVNDEVANRITAQLLLLAAEDPHSDIRFYINSPGGSVTAGFAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T+ MG AASMG LLS+G G R+ALP+ARIL+HQPS G G ASDI
Sbjct: 77 TMQLIEPDVATYAMGLAASMGQFLLSSGTPGKRYALPHARILMHQPSAGVGGTASDIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ K K L I + G+T E++ K DRD +ASEA D+G VD VL +
Sbjct: 137 AEVFSKWKHELARITAEQTGQTVEQILKDSDRDRWFTASEAKDYGFVDHVLTRDNPAPKS 196
Query: 215 S 215
+
Sbjct: 197 N 197
>gi|187251176|ref|YP_001875658.1| endopeptidase Clp [Elusimicrobium minutum Pei191]
gi|259585952|sp|B2KCS5|CLPP_ELUMP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|186971336|gb|ACC98321.1| Endopeptidase Clp [Elusimicrobium minutum Pei191]
Length = 195
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 97/198 (48%), Positives = 143/198 (72%), Gaps = 10/198 (5%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTG---QIEDHMATLICAQLLFLEAENPQKE 74
++P ++E+ YDI+SRLLK+RI+FV G +++ AT+I AQLL+L+AE+ ++E
Sbjct: 2 IIPTIIEKNVG----YDIFSRLLKDRIIFVGGREGEVDTASATMIIAQLLYLDAEDSERE 57
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+LYINSPGG+VTAG+AIYDTMQFIK PI+T CMGQA S G++LL+AG KG R+ALP+AR
Sbjct: 58 INLYINSPGGLVTAGLAIYDTMQFIKAPITTICMGQAMSFGAVLLAAGSKGKRYALPHAR 117
Query: 135 ILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
I++HQP SGQ +DIE + ++ K K L +I + G+ E++ + +R++ MS
Sbjct: 118 IMIHQPLIWGGGISGQVTDIEIESNELRKNKEHLLDILAHHTGQDKEKIRQDSERNYYMS 177
Query: 192 ASEACDWGVVDKVLMSRI 209
A EA +G++D+VL +
Sbjct: 178 AQEAKAYGLIDEVLDLKK 195
>gi|260578313|ref|ZP_05846229.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
gi|258603615|gb|EEW16876.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
Length = 209
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/204 (42%), Positives = 136/204 (66%), Gaps = 1/204 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 1 MSEMQMPEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G
Sbjct: 61 EGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGK 120
Query: 127 RFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNAR+L+HQP+ G GQ SD+E A++I ++++ + E ++ GK+ E+V D
Sbjct: 121 RAALPNARVLIHQPATGGVQGQVSDLEIQAKEIERMRKLMEETLARHTGKSAEQVRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G+VD+V R
Sbjct: 181 RDKILTAEEAKEYGIVDQVFDYRK 204
>gi|271969827|ref|YP_003344023.1| endopeptidase Clp [Streptosporangium roseum DSM 43021]
gi|270513002|gb|ACZ91280.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021]
Length = 196
Score = 188 bits (477), Expect = 6e-46, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 125/191 (65%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+ Q RGER D+YS LL ERIV++ I+ +A + AQ +FLE+ENP I Y
Sbjct: 6 IPNVIAQNPRGERIMDVYSHLLTERIVYLGTAIDAGVANALVAQFIFLESENPDASIQFY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
IN GG +A +AIYDTM++I+P + T C+GQA ++G++LL+AG +G R ALP+AR++LH
Sbjct: 66 INCEGGDPSAMLAIYDTMRYIRPRVETTCVGQAIAVGAVLLAAGAEGKRAALPHARVILH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+ G D+ A ++V+++ + I ++ G+T E + D D + +A+ A ++
Sbjct: 126 QPAAQGRGTIPDLILQADEVVRVRADIERILSRHTGQTVETLRADTDHDRVFTATAALEY 185
Query: 199 GVVDKVLMSRI 209
G++D+++ R
Sbjct: 186 GLLDQIIEERS 196
>gi|148272645|ref|YP_001222206.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|170781894|ref|YP_001710226.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter
michiganensis subsp. sepedonicus]
gi|147830575|emb|CAN01510.1| ATP-dependent protease, proteolytic subunit [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|169156462|emb|CAQ01610.1| ATP dependent Clp protease proteolytic subunit 2 [Clavibacter
michiganensis subsp. sepedonicus]
Length = 226
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 85/210 (40%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G + ++P E+T G + D Y++L ++RI+F+ Q++D A + AQL
Sbjct: 12 AGSTATSPSSRY--ILPSFEERTAYGYKRQDPYAKLFEDRIIFLGVQVDDASADDVMAQL 69
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+ +P ++I +YINSPGG TA AIYDTMQ++ P I T C+GQAAS ++LL+ G
Sbjct: 70 LVLESMDPDRDIVMYINSPGGSFTAMTAIYDTMQYVSPQIQTVCLGQAASAAAVLLAGGA 129
Query: 124 KGMRFALPNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ GQASDIE A +I++++ L + K+ + +++
Sbjct: 130 PGKRLALPNARVLIHQPATGESSGGQASDIEIQAAEIMRMRSWLEDTLAKHTNRDRDQIN 189
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ ++RD I+ A EA ++G++D+VL SR ++
Sbjct: 190 RDIERDKILGADEALEYGLIDQVLTSRKNL 219
>gi|317508501|ref|ZP_07966168.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
gi|316253192|gb|EFV12595.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
Length = 210
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 88/210 (41%), Positives = 133/210 (63%), Gaps = 3/210 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ +VP +E T+ G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 1 MNHIQPTSRYIVPSFIEHTSTGVKETNPYTKLFEERIIFLGTQVDDTSANDIMAQLLVLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ +P ++I++YINSPGG T+ MAIYDTMQF+ I+T C+GQAAS ++LL+AG G R
Sbjct: 61 SLDPDRDITMYINSPGGSFTSLMAIYDTMQFVHCDIATVCLGQAASAAAVLLAAGTPGKR 120
Query: 128 FALPNARILLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
ALPNAR+L+HQP GQA+D+E A +I +++R + + GK+ +EV K
Sbjct: 121 AALPNARVLIHQPRIDGGAIRGQATDLEIQAAEIERMRRLMETTLATHTGKSADEVRKDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
DRD I++A EA ++G++D V R +
Sbjct: 181 DRDKILTAEEAKEYGIIDTVYPYRKKSAKN 210
>gi|320010820|gb|ADW05670.1| Endopeptidase Clp [Streptomyces flavogriseus ATCC 33331]
Length = 205
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +YSRLL ERI+F+ Q++D +A I AQLL L AE P K
Sbjct: 1 MTNLMPYAAGEPSLGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQLLLLAAE-PDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTAGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ AQ +++ K R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAQYLLRTKTRMAEITAHHSGQTVETIIRDGDRDRWYTAE 179
Query: 194 EACDWGVVDKVLM 206
EA D+G++D+++
Sbjct: 180 EAKDYGLIDEIIT 192
>gi|198276174|ref|ZP_03208705.1| hypothetical protein BACPLE_02363 [Bacteroides plebeius DSM 17135]
gi|198270986|gb|EDY95256.1| hypothetical protein BACPLE_02363 [Bacteroides plebeius DSM 17135]
Length = 224
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 87/194 (44%), Positives = 134/194 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ + K+IS+
Sbjct: 31 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDSGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 91 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGKEGKRSALTHSRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+ASEA +
Sbjct: 151 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTDFDKVWADSDRDYWMTASEAKE 210
Query: 198 WGVVDKVLMSRIDI 211
+G++D+VL + +
Sbjct: 211 YGMIDEVLSRKPSL 224
>gi|182438716|ref|YP_001826435.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326779365|ref|ZP_08238630.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces cf.
griseus XylebKG-1]
gi|178467232|dbj|BAG21752.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces griseus subsp. griseus NBRC 13350]
gi|326659698|gb|EGE44544.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces cf.
griseus XylebKG-1]
Length = 205
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 94/193 (48%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +YSRLL ERI+F+ Q++D +A I AQLL L AE P K
Sbjct: 1 MTNLMPYAAGEPSLGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQLLLLAAE-PDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGAAGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ AQ +++ K R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAQYLLRTKTRMAEITAHHSGQTVETIIRDGDRDRWYTAE 179
Query: 194 EACDWGVVDKVLM 206
EA D+G++D+++
Sbjct: 180 EAKDYGLIDEIIT 192
>gi|271964885|ref|YP_003339081.1| endopeptidase Clp [Streptosporangium roseum DSM 43021]
gi|270508060|gb|ACZ86338.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021]
Length = 192
Score = 187 bits (476), Expect = 6e-46, Method: Composition-based stats.
Identities = 82/181 (45%), Positives = 121/181 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RIV + ++ D +A IC +LL L A + + +I LYINSPGG V+AGMAIYD
Sbjct: 12 LYQRLLRKRIVVLGSEVNDEVANRICGELLLLSAGDDRSDIWLYINSPGGSVSAGMAIYD 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
MQ+I ++T MG A SMG LL AG G R+ALP+ARI++HQPSGG G ASDI
Sbjct: 72 VMQYIPNDVATVGMGLAGSMGQFLLCAGAPGKRYALPHARIMMHQPSGGVGGTASDIVIQ 131
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ ++ K+ ++E + G+ E++E+ DRD +A+EA D+G+VD+V+ ++
Sbjct: 132 AEQMLYTKQMMSERIAFHTGQPLEQIEEDWDRDRWFTATEAKDYGLVDEVIRKTSEVPSA 191
Query: 215 S 215
+
Sbjct: 192 N 192
>gi|331695808|ref|YP_004332047.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326950497|gb|AEA24194.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 208
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 97/210 (46%), Positives = 143/210 (68%), Gaps = 8/210 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MSFE + + ++P VE+T+ G + + Y++L +ERI+F+ QI+D A +
Sbjct: 1 MSFEMPSSRY-------VLPSFVERTSYGVKESNPYNKLFEERIIFLGVQIDDASANDVM 53
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+ +P +EIS+YINSPGG T+ MAIYDTMQFI+P I T C+GQAAS ++LL+
Sbjct: 54 AQLLCLESADPDREISMYINSPGGSFTSLMAIYDTMQFIRPDIQTVCLGQAASAAAVLLA 113
Query: 121 AGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R A+ NARIL+HQP+ F GQ SD+E A +I +++R L K+ G+T E+
Sbjct: 114 AGTPGRRLAVQNARILIHQPATEGFYGQVSDLEIQAAEITRMRRLLETTLAKHSGRTPEQ 173
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
V ++RD I++A EA ++G+VD+++ SR
Sbjct: 174 VHDDIERDRILTADEAKEYGIVDEIIQSRK 203
>gi|189462223|ref|ZP_03011008.1| hypothetical protein BACCOP_02906 [Bacteroides coprocola DSM 17136]
gi|189431076|gb|EDV00061.1| hypothetical protein BACCOP_02906 [Bacteroides coprocola DSM 17136]
Length = 223
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 86/194 (44%), Positives = 132/194 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDSGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIISDHSHTEFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSRIDI 211
+G++D+VL + +
Sbjct: 210 YGMIDEVLSRKPAL 223
>gi|149528358|ref|XP_001515048.1| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli), partial
[Ornithorhynchus anatinus]
Length = 430
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 99/161 (61%), Positives = 133/161 (82%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+VVEQT RGER+YDIYSRLL+ERI+ V G I+D +A+L+ AQLLFL++E+ +K I +YI
Sbjct: 270 PIVVEQTGRGERAYDIYSRLLRERIICVMGPIDDSLASLVIAQLLFLQSESNKKPIHMYI 329
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGGVVT+G+AIYDTMQ+I PI T+C+GQAASMGSLLL+AG GMR +LPN+RI++HQ
Sbjct: 330 NSPGGVVTSGLAIYDTMQYILNPICTWCVGQAASMGSLLLAAGSPGMRHSLPNSRIMIHQ 389
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
PSGG GQA+DI A++I+K+K++L IY K+ + + +
Sbjct: 390 PSGGARGQATDIAIQAEEIMKLKKQLYGIYAKHTKQPLDVI 430
>gi|224535961|ref|ZP_03676500.1| hypothetical protein BACCELL_00825 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522416|gb|EEF91521.1| hypothetical protein BACCELL_00825 [Bacteroides cellulosilyticus
DSM 14838]
Length = 220
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 132/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ Q++D+ A + AQLL+L++ P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQVDDYTANTLQAQLLYLDSVEPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL AG +G R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFITSDVATICTGMAASMAAVLLVAGAEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYTIIADHSHTPFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G+VD+VL+ +
Sbjct: 210 YGMVDEVLIKK 220
>gi|145593253|ref|YP_001157550.1| endopeptidase Clp [Salinispora tropica CNB-440]
gi|145302590|gb|ABP53172.1| ATP-dependent Clp protease proteolytic subunit ClpP [Salinispora
tropica CNB-440]
Length = 194
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 79/177 (44%), Positives = 123/177 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I+ RLLKERIVF+ ++ D A +CAQ+L L AE+P ++I LYINSPGG V+AGMA+YD
Sbjct: 16 IFERLLKERIVFLGTEVTDESANRVCAQILLLAAEDPDRDIKLYINSPGGSVSAGMAVYD 75
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF++ ++T +G A SMG LL AG G R+ALP++ IL+HQPSGG G A+DI
Sbjct: 76 TMQFVRNDVATLALGMAGSMGQFLLCAGTAGKRYALPHSWILMHQPSGGMGGTAADIRVQ 135
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++++ +K+ + + ++ G+T E+++ DRD + +A ++G++D V+ ++
Sbjct: 136 AENLLHVKKTMQGLIAQHSGRTLVEIQQDWDRDRWFTPEQAREYGLIDHVVTQAAEL 192
>gi|255638490|gb|ACU19554.1| unknown [Glycine max]
Length = 322
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 124/201 (61%), Gaps = 8/201 (3%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
S +P E D + LL++RI+F+ Q++D A I +QLLF
Sbjct: 60 SPHDFSASTASPWLPRFEE--------LDATNMLLRQRIIFLGSQVDDMTADFIISQLLF 111
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+AE+ +K+I L+IN PGG VTAGM IYD M+ K +ST C+G AASMG+ +L++G KG
Sbjct: 112 LDAEDSKKDIKLFINPPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFILASGTKG 171
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ +PN+R+++HQP G G+A+++ +++ K ++N+I + GK E++E D
Sbjct: 172 KRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTD 231
Query: 186 RDHIMSASEACDWGVVDKVLM 206
RD+ M+ EA ++G+VD V+
Sbjct: 232 RDNFMNPWEAKEYGLVDGVID 252
>gi|15485610|emb|CAC67407.1| Clp protease 2 proteolytic subunit [Solanum lycopersicum]
Length = 299
Score = 187 bits (476), Expect = 7e-46, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 126/186 (67%), Gaps = 6/186 (3%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 103 PMVQE------RFQSVISQLFQYRIIRCGGAVDDDMANVIVAQLLYLDAVDPTKDIVMYV 156
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMA++DTM+ I+P +ST C+G AASMG+ LLSAG KG R++LPN+RI++HQ
Sbjct: 157 NSPGGSVTAGMAVFDTMRHIRPDVSTVCVGLAASMGAFLLSAGTKGKRYSLPNSRIMIHQ 216
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG G SDIE A +++ K LN G++ + + + DRD MSA EA ++G
Sbjct: 217 PLGGAQGGQSDIEIQANEMLHHKANLNGYLAYQTGQSLDRINQDTDRDFFMSAKEAKEYG 276
Query: 200 VVDKVL 205
++D V+
Sbjct: 277 LIDGVI 282
>gi|302528951|ref|ZP_07281293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
gi|302437846|gb|EFL09662.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
Length = 217
Score = 187 bits (476), Expect = 8e-46, Method: Composition-based stats.
Identities = 89/202 (44%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + ++P VE+T+ G + + Y++L +ER +F+ Q++D A + AQLL LE
Sbjct: 14 QTPQSRY--ILPSYVERTSYGVKESNPYNKLYEERTIFLGVQVDDASANDVMAQLLHLEH 71
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+P ++IS+YINSPGG T+ MAIYDTMQ+I+P IST C+GQAAS ++LL+AG G R
Sbjct: 72 EDPDRDISIYINSPGGSFTSLMAIYDTMQYIRPDISTVCLGQAASAAAVLLAAGTPGKRM 131
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNAR+L+HQP+ GQ SD+E A +I +++R++ I K+ K +E++ ++RD
Sbjct: 132 ALPNARVLIHQPATEGTYGQVSDLEIQANEIQRVRRQMEVILAKHTNKEPDEIKADIERD 191
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA +G++D+VL R
Sbjct: 192 KILTAEEAKAYGLIDEVLPYRK 213
>gi|227495367|ref|ZP_03925683.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
gi|226831121|gb|EEH63504.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
Length = 211
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V E+T+ G + D YS+L ++RIVF+ Q++D A I AQLL LE+++P I++
Sbjct: 18 VLPEVEERTSYGVKRLDPYSKLFQDRIVFLGVQVDDASADDIMAQLLVLESQDPDSMITM 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+IKP + T C+GQAAS ++LL+ G G R ALPNAR+++
Sbjct: 78 YINSPGGSFTAMTAIYDTMQYIKPQVQTVCLGQAASAAAVLLAGGAPGRRLALPNARVMI 137
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQASDIE A+++ +++ L E + G+ E+V + +DRD I++A +A
Sbjct: 138 HQPAMEGMRGQASDIEIVAEEMERMRTWLEETIAHHSGREIEQVRRDIDRDKILTAQQAL 197
Query: 197 DWGVVDKVLMSRI 209
++G++D+VL SR
Sbjct: 198 EYGLIDQVLTSRK 210
>gi|291439660|ref|ZP_06579050.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
ghanaensis ATCC 14672]
gi|291342555|gb|EFE69511.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
ghanaensis ATCC 14672]
Length = 219
Score = 187 bits (475), Expect = 9e-46, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IK + T MG AASMG LLSAG G RFALPNA I
Sbjct: 76 YLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ KRR+ E+ ++ G+T E++ + DRD A EA
Sbjct: 136 LIHQPSAGLAGSASDIKIHAERLLHTKRRMAELTSQHTGQTVEQITRDSDRDRWFDAFEA 195
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 196 KEYGLIDDVI 205
>gi|332044507|gb|EGI80701.1| Endopeptidase Clp [Lacinutrix algicola 5H-3-7-4]
Length = 224
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 131/191 (68%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+E+ D++SRL+ +RI+F+ I D++A +I AQLLFL + + K+I
Sbjct: 33 SMTPYVIEERQLNISQLDVFSRLMMDRILFLGTGINDNIANIIQAQLLFLASTDNTKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFI P ++T C G AASMG++LL AGEKG R L ++R++
Sbjct: 93 MYINSPGGSVYAGLGIYDTMQFIGPDVATICTGMAASMGAVLLCAGEKGKRSGLEHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++I+ +K+ L EI K+ G+ Y+ + DRD+ M A A
Sbjct: 153 IHQPLGGAQGQASDIEITAREILTLKKELYEIISKHSGQDYDTIYNDSDRDYWMKADRAK 212
Query: 197 DWGVVDKVLMS 207
++G++D+VL
Sbjct: 213 EYGMIDEVLKR 223
>gi|89893323|ref|YP_516810.1| hypothetical protein DSY0577 [Desulfitobacterium hafniense Y51]
gi|219666595|ref|YP_002457030.1| ATP-dependent Clp protease proteolytic subunit [Desulfitobacterium
hafniense DCB-2]
gi|116243100|sp|Q250C6|CLPP1_DESHY RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|89332771|dbj|BAE82366.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536855|gb|ACL18594.1| Endopeptidase Clp [Desulfitobacterium hafniense DCB-2]
Length = 193
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 97/193 (50%), Positives = 138/193 (71%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
LVPMV+EQT+RGERS DI+SRLL +R+V + G + + A+LI AQ+LFLE+ + K+
Sbjct: 1 MSQLVPMVIEQTSRGERSCDIFSRLLNDRVVMLNGMVTNESASLIIAQMLFLESADCDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG VT G+AI DTM +IK +ST +GQ+ S SLLL+AG KG RFAL N+
Sbjct: 61 IHFYINSPGGSVTDGLAIMDTMNYIKCDVSTISIGQSGSAASLLLAAGAKGKRFALANSE 120
Query: 135 ILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+L+HQPS GQ +DI+ H+ + K K +LNE Y + G+ E+++K ++RD+ M+A
Sbjct: 121 VLIHQPSISGGLQGQTTDIKIHSDWLTKTKEKLNETYSRLTGQPLEKIQKDMERDYYMTA 180
Query: 193 SEACDWGVVDKVL 205
+A D+G++DK+L
Sbjct: 181 GQAQDYGLIDKIL 193
>gi|323343310|ref|ZP_08083537.1| ATP-dependent Clp protease, protease subunit [Prevotella oralis
ATCC 33269]
gi|323095129|gb|EFZ37703.1| ATP-dependent Clp protease, protease subunit [Prevotella oralis
ATCC 33269]
Length = 222
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 130/192 (67%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ + K+IS+
Sbjct: 31 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSADSGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG G R AL ++R+++
Sbjct: 91 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGTDGKRNALTHSRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + YE+V + DR++ M+A EA +
Sbjct: 151 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIIANHSHTPYEKVWQDADRNYWMTAEEAKE 210
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 211 YGMIDAVLTRKK 222
>gi|260909476|ref|ZP_05916180.1| ATP-dependent Clp protease proteolytic subunit [Prevotella sp. oral
taxon 472 str. F0295]
gi|288929611|ref|ZP_06423455.1| Clp protease [Prevotella sp. oral taxon 317 str. F0108]
gi|260636401|gb|EEX54387.1| ATP-dependent Clp protease proteolytic subunit [Prevotella sp. oral
taxon 472 str. F0295]
gi|288329116|gb|EFC67703.1| Clp protease [Prevotella sp. oral taxon 317 str. F0108]
Length = 220
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 133/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEINDYTANTLQAQLLYLDSADAGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G++G R ALP++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSALPHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I+K K+ L I + +E+V DR++ M+A EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAKEILKFKKELYTIISNHSHTPFEKVWNDSDRNYWMNAEEAKE 209
Query: 198 WGVVDKVLMSR 208
+G++D VL+ +
Sbjct: 210 YGMIDSVLVKK 220
>gi|227495366|ref|ZP_03925682.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
gi|226831120|gb|EEH63503.1| endopeptidase Clp [Actinomyces coleocanis DSM 15436]
Length = 205
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/177 (52%), Positives = 123/177 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+++RLLKERI+++ G++ D A ICAQ+L L AE+P K+I LYINSPGG VTAGMAIYD
Sbjct: 25 VFNRLLKERIIWLGGEVRDENANQICAQMLLLAAEDPDKDIYLYINSPGGSVTAGMAIYD 84
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFIKP + T G AASMG LL+AG KG R+A P+ARILLHQP GG G ++I +
Sbjct: 85 TMQFIKPDVVTVATGIAASMGQFLLTAGAKGKRYATPHARILLHQPLGGVGGTTTEIRIN 144
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A I+++KR L EI + GKT E++ DRDH +A EA ++G D ++ +
Sbjct: 145 ADLILQMKRELAEITAERTGKTVEQIHADADRDHWYTAQEALEYGFFDHIVTKADAV 201
>gi|302545416|ref|ZP_07297758.1| Clp protease [Streptomyces hygroscopicus ATCC 53653]
gi|302463034|gb|EFL26127.1| Clp protease [Streptomyces himastatinicus ATCC 53653]
Length = 204
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 97/184 (52%), Positives = 126/184 (68%), Gaps = 2/184 (1%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E T G +Y+RLL ERI+F+ ++D +A I AQLL L A +P K+I+LYINSPG
Sbjct: 11 EPTGGGLGDQ-VYNRLLGERIIFLGQPVDDEIANKITAQLLLLAA-DPDKDINLYINSPG 68
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++AGMAIYDTMQFI + T MG AASMG LLSAG G RFALPNA IL+HQPS G
Sbjct: 69 GSISAGMAIYDTMQFIPNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAG 128
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+G ASDI+ HA+ ++ KRR+ E+ + G+T E++ + DRD SA EA +G+VD
Sbjct: 129 LAGSASDIKIHAERLLHTKRRMAELTAFHTGQTVEQITRDSDRDRWFSAEEAKAYGLVDD 188
Query: 204 VLMS 207
V+ S
Sbjct: 189 VMAS 192
>gi|118618991|ref|YP_907323.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
ulcerans Agy99]
gi|183983781|ref|YP_001852072.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
marinum M]
gi|118571101|gb|ABL05852.1| ATP-dependent CLP protease proteolytic subunit 2 ClpP2
[Mycobacterium ulcerans Agy99]
gi|183177107|gb|ACC42217.1| ATP-dependent CLP protease proteolytic subunit 2 ClpP2
[Mycobacterium marinum M]
Length = 211
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 PQVQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G
Sbjct: 61 ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 120
Query: 127 RFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNAR+L+HQP SG GQ SD+E A +I +++ + ++ GK + K
Sbjct: 121 RMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMESTLARHTGKDPSVIRKDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A EA D+G++D VL R
Sbjct: 181 DRDKILTAEEAKDYGIIDTVLEYRK 205
>gi|302869359|ref|YP_003837996.1| endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
gi|315504166|ref|YP_004083053.1| endopeptidase clp [Micromonospora sp. L5]
gi|302572218|gb|ADL48420.1| Endopeptidase Clp [Micromonospora aurantiaca ATCC 27029]
gi|315410785|gb|ADU08902.1| Endopeptidase Clp [Micromonospora sp. L5]
Length = 220
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE +P ++I +
Sbjct: 18 VLPSFVERTSYGMKESNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLEGTDPDRDIIM 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P I T C+GQAAS ++LLSAG G R ALPN+RI++
Sbjct: 78 YINSPGGSFTAMTAIYDTMQYVRPDIQTVCLGQAASAAAVLLSAGTPGKRMALPNSRIII 137
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SDIE A++I++++ +L ++ ++C + E+V K +DRD IM+A E+
Sbjct: 138 HQPATEGGYGQGSDIEIQAREILRMRTQLEDMLSRHCNRPIEQVRKDIDRDKIMTAEESK 197
Query: 197 DWGVVDKVLMSRID 210
++G+VD +L SR
Sbjct: 198 EYGLVDTILTSRKK 211
>gi|224079413|ref|XP_002305856.1| predicted protein [Populus trichocarpa]
gi|222848820|gb|EEE86367.1| predicted protein [Populus trichocarpa]
Length = 338
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 126/190 (66%), Gaps = 8/190 (4%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+P E D + LL++RI+F+ Q++D A I +QLLFL+AE+P+K+I
Sbjct: 89 PTLPKFEE--------LDTTNMLLRQRIIFLGSQVDDVTADFIISQLLFLDAEDPKKDIK 140
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
L+INSPGG VTAG+ IYD M+ K +ST C+G AASMG+ LLSAG KG RF +PN R++
Sbjct: 141 LFINSPGGSVTAGLGIYDAMKLCKADVSTICLGLAASMGAFLLSAGSKGKRFCMPNGRVM 200
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G+AS++ +++ K +LN+I + GK E+VE DRD+ M+A EA
Sbjct: 201 IHQPLGTAGGKASEMSIRIREMSYHKIKLNKILSRITGKPLEQVEVDTDRDNFMNAWEAK 260
Query: 197 DWGVVDKVLM 206
++G+VD+V+
Sbjct: 261 EYGLVDEVID 270
>gi|318076382|ref|ZP_07983714.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp.
SA3_actF]
Length = 205
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + G D +YSRLL ERI+F+ Q++D +A I AQ+L L A +P K
Sbjct: 1 MTNLMPSAAGEAFSGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQMLLLAA-DPSK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMAIYDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAIYDTMQYIPNDVITIGMGMAASMGQFLLTGGTPGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ A+ +++ K R+ EI ++ G+T E++ + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAEYLLRTKNRMAEITARHSGQTIEKIIRDGDRDRWFTAE 179
Query: 194 EACDWGVVDKVLM 206
EA D+G++D+++
Sbjct: 180 EAKDYGLIDEIIT 192
>gi|282866711|ref|ZP_06275751.1| Endopeptidase Clp [Streptomyces sp. ACTE]
gi|282558410|gb|EFB63972.1| Endopeptidase Clp [Streptomyces sp. ACTE]
Length = 205
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P+ + + G D +YSRLL ERI+F+ Q++D +A I AQLL L A +P K
Sbjct: 1 MTNLMPLAAGEPSLGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQLLLLAA-DPDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTAGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ A+ +++ K R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAEYLLRTKTRMAEITAHHSGQTVETIIRDGDRDRWYTAE 179
Query: 194 EACDWGVVDKVLM 206
EA D+G++D+++
Sbjct: 180 EAKDYGLIDEIIT 192
>gi|254821427|ref|ZP_05226428.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
intracellulare ATCC 13950]
Length = 211
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 132/205 (64%), Gaps = 4/205 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 PETQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G
Sbjct: 61 ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 120
Query: 127 RFALPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNAR+L+HQPS GQ SD+E A +I +++ + ++ GK V K
Sbjct: 121 RMALPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATVRKDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A EA D+G++D VL R
Sbjct: 181 DRDKILTAEEAKDYGIIDTVLEYRK 205
>gi|254382770|ref|ZP_04998127.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces sp.
Mg1]
gi|194341672|gb|EDX22638.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces sp.
Mg1]
Length = 227
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 2/197 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L P + + G D +Y+RLL ERI+F+ Q++D +A I AQLL L AE P+K+I
Sbjct: 25 NLKPYAAGEPSIGGGLGDHVYNRLLGERIIFLGQQVDDDIANKITAQLLLLAAE-PEKDI 83
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G KG RFALPN I
Sbjct: 84 YLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGAKGKRFALPNTDI 143
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQ S G G ASDI+ AQ +++ K+R+ EI + G+T E + + DRD ++ EA
Sbjct: 144 LMHQGSAGIGGTASDIKIQAQYLLRTKQRMAEITAFHSGQTVEAIIRDGDRDRWFTSEEA 203
Query: 196 CDWGVVDKVLMSRIDIE 212
D+G++D+++ + ++
Sbjct: 204 KDYGLIDEIISAASNVP 220
>gi|318060124|ref|ZP_07978847.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp.
SA3_actG]
Length = 201
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 1/172 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+YSRLL ERI+F+ Q++D +A I AQ+L L A +P K+I LYINSPGG VTAGMAIYD
Sbjct: 18 VYSRLLGERIIFLGQQVDDDIANKITAQMLLLAA-DPSKDIYLYINSPGGSVTAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I + T MG AASMG LL+ G G RFALPN IL+HQ S G G ASDI+
Sbjct: 77 TMQYIPNDVITIGMGMAASMGQFLLTGGTPGKRFALPNTDILMHQGSAGIGGTASDIKIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ +++ K R+ EI ++ G+T E++ + DRD +A EA D+G++D+++
Sbjct: 137 AEYLLRTKNRMAEITARHSGQTIEKIIRDGDRDRWFTAEEAKDYGLIDEIIT 188
>gi|311896032|dbj|BAJ28440.1| putative ATP-dependent Clp protease proteolytic subunit
[Kitasatospora setae KM-6054]
Length = 216
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/178 (48%), Positives = 128/178 (71%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ Q++D +A I AQLL L A +P+K+I LYINSPGG ++AGMAIYD
Sbjct: 29 VYNRLLNERIIFLGQQVDDDIANKITAQLLLLAA-DPEKDIYLYINSPGGSISAGMAIYD 87
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LL+AG KG RF+LPNA IL+HQPS G G A+DI
Sbjct: 88 TMQYIKNDVVTIAMGMAASMGQFLLTAGAKGKRFSLPNANILMHQPSAGLGGSATDIRIQ 147
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ +++ K+R++E+ ++ G++++++ DRD + EA +G++D+++ S D+
Sbjct: 148 AEQLLRTKKRMSELIAQHSGQSFDQITADSDRDRWFTPEEAKAYGLIDEIMHSAADVP 205
>gi|293400411|ref|ZP_06644557.1| Clp protease [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306811|gb|EFE48054.1| Clp protease [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 194
Score = 187 bits (474), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/192 (48%), Positives = 131/192 (68%), Gaps = 1/192 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +VP ++E+ ER YD+YS LLKERI+ +TG+I+D M++ ICAQLL+L + + I
Sbjct: 1 MVIVPTIIERNAASERVYDLYSCLLKERIIILTGEIDDAMSSSICAQLLYLASISKD-PI 59
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYD M++I I+T MG ASM ++LL AGEKG R AL NA I
Sbjct: 60 QMYINSPGGSVSAGLAIYDVMKYISCEIATIGMGMCASMAAVLLCAGEKGKRSALQNAEI 119
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA D+E AQ I ++K+RL I CG+ ++K DRD+ M A A
Sbjct: 120 MIHQPLGGMQGQAKDMEIAAQHINQLKQRLYHILSSQCGQPIATIKKDCDRDYYMDAISA 179
Query: 196 CDWGVVDKVLMS 207
+G++D V+ +
Sbjct: 180 KAYGLIDTVIEN 191
>gi|240170931|ref|ZP_04749590.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
kansasii ATCC 12478]
Length = 211
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 86/205 (41%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 PQSQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G
Sbjct: 61 ESLDPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGK 120
Query: 127 RFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNAR+L+HQP SG GQ SD+E A +I +++ + ++ GK + K
Sbjct: 121 RMALPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAAVIRKDT 180
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
DRD I++A EA D+G++D VL R
Sbjct: 181 DRDKILTAEEAKDYGIIDTVLEYRK 205
>gi|297194374|ref|ZP_06911772.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
pristinaespiralis ATCC 25486]
gi|197720968|gb|EDY64876.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
pristinaespiralis ATCC 25486]
Length = 205
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +YSRLL ERI+F+ Q++D +A I AQ+L L A +P K
Sbjct: 1 MTNLMPYAAGEPSIGGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQMLLLAA-DPDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGAAGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ A+ +++ K+R+ EI ++ G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGLGGTASDIKIQAEYLLRTKKRMAEITAQHSGQTVETIIRDGDRDRWFTAD 179
Query: 194 EACDWGVVDKVLM 206
EA ++G++D+++
Sbjct: 180 EAKEYGLIDEIIS 192
>gi|219115403|ref|XP_002178497.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410232|gb|EEC50162.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 260
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/178 (47%), Positives = 120/178 (67%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+ SRLLK+RI+ + + D +A ++ AQLL+L E+P K+I+LYINSPGG V+AG+A
Sbjct: 70 QLDVVSRLLKDRILLLGTDVNDEVANVLVAQLLYLANEDPNKDITLYINSPGGSVSAGLA 129
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTM+FI + T C G AASMG+ LL AG G R +LPNARI++HQP GG GQA DI
Sbjct: 130 IYDTMKFIPCDVQTVCFGMAASMGAFLLGAGTPGKRKSLPNARIMIHQPLGGAQGQAQDI 189
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E A++I+ K LN+ + E++ DRD M+ EA D+G++D+V+ ++
Sbjct: 190 EIQAKEILYTKALLNKFIADYTDQPEEKIAADCDRDFFMTPYEALDYGIIDEVIKTKT 247
>gi|300934279|ref|ZP_07149535.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
resistens DSM 45100]
Length = 206
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 133/200 (66%), Gaps = 1/200 (0%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE +
Sbjct: 2 QMPEMRYILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLVLEGLD 61
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R AL
Sbjct: 62 PDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKRAAL 121
Query: 131 PNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G GQ SD+E A++I +++ + ++ G++ E++ DRD I
Sbjct: 122 PNARVLIHQPATGGVQGQVSDLEIQAKEIERMRTLMETTLARHTGRSAEQIRIDTDRDKI 181
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A EA ++G++D+V R
Sbjct: 182 LTAEEAKEYGIIDQVFEYRK 201
>gi|307250531|ref|ZP_07532475.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857424|gb|EFM89536.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 172
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 103/170 (60%), Positives = 134/170 (78%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+KERI+F+TGQ+EDHMA LI AQ+LFLEAE+P+K+I LYINSPGGVVTAG+AIYDTM FI
Sbjct: 1 MKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFI 60
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP ++T C GQA SMG+ LLS G KG RFALPNAR+++HQP GG GQA+DI+ AQ+I+
Sbjct: 61 KPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEIL 120
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
K+K L ++ G+ +E+V +RD+ MSA EA ++G++DKVL R
Sbjct: 121 KLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVLTHRD 170
>gi|29833643|ref|NP_828277.1| ATP-dependent Clp protease proteolytic subunit 2 [Streptomyces
avermitilis MA-4680]
gi|67460532|sp|Q826S4|CLPP5_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 5;
AltName: Full=Endopeptidase Clp 5
gi|29610767|dbj|BAC74812.1| putative ATP-dependent Clp protease proteolytic subunit 2
[Streptomyces avermitilis MA-4680]
Length = 211
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 125/204 (61%), Gaps = 4/204 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ +P E+ + G R+ D YS+LL ERIVF+ I+D A + AQ + LE
Sbjct: 1 MNRPSARYA--LPEFTERLSTGLRTLDPYSKLLDERIVFLGTPIDDTSANDVMAQFMHLE 58
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
P ++ISLYINSPGG +A A+YDTMQF+ + T C+GQAAS ++LL+ G G R
Sbjct: 59 HLAPDRDISLYINSPGGSFSAMTAVYDTMQFVSCDVETICLGQAASAAAVLLAGGTPGKR 118
Query: 128 FALPNARILLHQPSGGF--SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
ALP AR+L+HQPS GQASD+ A ++ + + +L E+ V++ G++ E V ++
Sbjct: 119 LALPGARVLIHQPSLPAPVQGQASDLVIQAAELARTREQLEELLVRHTGQSPERVAADIE 178
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I+ A A +G+VD+V+ SR
Sbjct: 179 RDKILDAPAAVAYGLVDRVVPSRK 202
>gi|227833713|ref|YP_002835420.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
aurimucosum ATCC 700975]
gi|262184720|ref|ZP_06044141.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
aurimucosum ATCC 700975]
gi|227454729|gb|ACP33482.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
aurimucosum ATCC 700975]
Length = 207
Score = 186 bits (473), Expect = 1e-45, Method: Composition-based stats.
Identities = 87/202 (43%), Positives = 136/202 (67%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + ++P +EQ +G ++ + YS+L +ERI+F+ Q++D A I AQLL LE+
Sbjct: 5 QMPSSRY--VLPEFIEQNAQGSKTTNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLES 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
++P ++I++YINSPGG TA MAIYDTM++++P + T C+GQAAS ++LL+AG G R
Sbjct: 63 QDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKRA 122
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+R+L+HQP GQ SD+E A +I +++R + E ++ G+T E+V DRD
Sbjct: 123 ALPNSRVLIHQPRTQGTQGQVSDLEIEANEIERMRRLMEETLAEHTGRTAEQVRIDTDRD 182
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA D+G++D V R
Sbjct: 183 KILTAQEAVDYGLIDTVFDYRK 204
>gi|330469649|ref|YP_004407392.1| endopeptidase Clp [Verrucosispora maris AB-18-032]
gi|328812620|gb|AEB46792.1| endopeptidase Clp [Verrucosispora maris AB-18-032]
Length = 220
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 88/194 (45%), Positives = 137/194 (70%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T+ G + + Y++L ++RI+F+ Q++D A + AQLL LE +P ++I +
Sbjct: 18 VLPSFVERTSYGVKESNPYNKLFEDRIIFLGVQVDDASANDVMAQLLTLEGTDPDRDIIM 77
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+++P I T C+GQAAS ++LL+AG G R ALPN+RI++
Sbjct: 78 YINSPGGSFTAMTAIYDTMQYVRPDIQTVCLGQAASAAAVLLAAGTPGKRMALPNSRIII 137
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SDIE A++I++++ +L E+ ++C + E+V K +DRD IM+A E+
Sbjct: 138 HQPATEGGYGQGSDIEIQAREILRMRTQLEEMLSRHCNRPIEKVRKDIDRDKIMTAEESR 197
Query: 197 DWGVVDKVLMSRID 210
++G+VD +L SR
Sbjct: 198 EYGLVDTILSSRKK 211
>gi|262201603|ref|YP_003272811.1| endopeptidase Clp [Gordonia bronchialis DSM 43247]
gi|262084950|gb|ACY20918.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247]
Length = 201
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/189 (42%), Positives = 125/189 (66%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VV +T +GER D+YSRLL+ERI+++ ++D +A + AQ+L L+++NP+ I LY
Sbjct: 6 IPNVVSRTPQGERVMDVYSRLLEERIIYLGTPVDDDVANALIAQILHLDSDNPEAPIDLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INS GG V A A+YDTMQ+ PI+T C+GQA S +LLL+AG+ G R LP+AR+LLH
Sbjct: 66 INSTGGSVNATFALYDTMQYCHAPIATTCVGQALSSSALLLAAGDAGRRSVLPHARVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSG G D+ A++I++++ + E ++ G+ + + DRD ++ A E D+
Sbjct: 126 QPSGQGRGTIPDLILAAEEILRVREEMEEALSRHTGRDIATLRRDTDRDRVLRADEIVDY 185
Query: 199 GVVDKVLMS 207
G+ D V+
Sbjct: 186 GIADAVIAH 194
>gi|281425294|ref|ZP_06256207.1| hypothetical protein HMPREF0971_02266 [Prevotella oris F0302]
gi|299141492|ref|ZP_07034628.1| Clp protease [Prevotella oris C735]
gi|281400587|gb|EFB31418.1| Clp protease [Prevotella oris F0302]
gi|298576828|gb|EFI48698.1| Clp protease [Prevotella oris C735]
Length = 221
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDSGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ +E+V + DR++ M+A EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISEHSHTPFEKVWQDSDRNYWMTAQEAKE 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VL+ +
Sbjct: 210 YGMIDEVLVRKK 221
>gi|219124070|ref|XP_002182335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406296|gb|EEC46236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 86/210 (40%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
Query: 8 KKDSEDVFLGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ + + VP V + + DIY+RL +ERI+F+ +I+D +A + +L
Sbjct: 4 SNRATITMMPIGVPKVAYRVPGSQSADWVDIYNRLYRERIIFLGAEIDDELANQVIGVML 63
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
+L++E+ K I LYINSPGG V +G+AI+D MQ IK + T +G AASMGS +L AG K
Sbjct: 64 YLDSEDSSKPIYLYINSPGGSVISGLAIFDAMQHIKSEVITINLGLAASMGSFILGAGSK 123
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R ALP++R ++HQP GG GQA DI+ A I++I+ L + Y G+T + + + L
Sbjct: 124 GKRLALPSSRTMIHQPMGGAQGQAEDIKVEAAQIMRIRDNLVKSYSMMTGQTQDRIIQDL 183
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
DRD+ MSA EA ++G+VD+VL + + +
Sbjct: 184 DRDNFMSAQEAMEYGLVDRVLDYNKNTDSQ 213
>gi|255532968|ref|YP_003093340.1| endopeptidase Clp [Pedobacter heparinus DSM 2366]
gi|255345952|gb|ACU05278.1| Endopeptidase Clp [Pedobacter heparinus DSM 2366]
Length = 230
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 89/189 (47%), Positives = 134/189 (70%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I D A +I AQLLFL++ + ++I
Sbjct: 36 AMTPYIIEERQLNVAQMDVFSRLMMDRIIFLGDAIYDGNANIIQAQLLFLQSTDNNRDIQ 95
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ+I P ++T C G AASMG++LL AG KG R ALP++R++
Sbjct: 96 IYINSPGGSVYAGLGIYDTMQYIAPDVATICTGMAASMGAVLLVAGAKGKRAALPHSRVM 155
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASD+E + ++++K+K+ L +I + G++YE VEK DRD+ M A EA
Sbjct: 156 IHQPSGGAQGVASDMEINLREMLKLKKELYDIISNHSGQSYEWVEKASDRDYWMKAEEAK 215
Query: 197 DWGVVDKVL 205
+G++D+VL
Sbjct: 216 GFGMIDEVL 224
>gi|255326613|ref|ZP_05367690.1| Clp protease [Rothia mucilaginosa ATCC 25296]
gi|255296353|gb|EET75693.1| Clp protease [Rothia mucilaginosa ATCC 25296]
Length = 229
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 97/201 (48%), Positives = 145/201 (72%), Gaps = 4/201 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P E+T G + D Y++L ++RI+F+ Q++D A I AQLL LEA++
Sbjct: 18 PSNRY--VLPSFEERTPYGYKRQDPYAKLFEDRIIFLGTQVDDASADDIMAQLLVLEAQD 75
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+++I+LYINSPGG TA AIYDTMQFI+P I T C+GQAAS ++LL+AG G R AL
Sbjct: 76 PERDITLYINSPGGSFTAMTAIYDTMQFIRPEIQTVCLGQAASAAAVLLAAGTPGKRLAL 135
Query: 131 PNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PNAR+L+HQP SG GQASDIE HA ++++++ + + GKTYE+V+++++RD+
Sbjct: 136 PNARVLIHQPALSGQQGGQASDIEIHANEVMRMREWTAQTLALHSGKTYEKVDRSIERDN 195
Query: 189 IMSASEACDWGVVDKVLMSRI 209
I++A+ A ++G+VDKVL SR
Sbjct: 196 ILTAAAALEYGLVDKVLESRK 216
>gi|158316682|ref|YP_001509190.1| endopeptidase Clp [Frankia sp. EAN1pec]
gi|158112087|gb|ABW14284.1| Endopeptidase Clp [Frankia sp. EAN1pec]
Length = 236
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 119/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ RIVF+ +ED +A ICA+LL L +++P +I LYINSPGG V+AGMAIYD
Sbjct: 41 VFHRLLQNRIVFLGSVVEDTIANAICAKLLLLASDDPSADIHLYINSPGGSVSAGMAIYD 100
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I ++T +G A SMG LLS+G G RFALP++R+++HQPSGG G A+DI
Sbjct: 101 TMQYIANDVATVALGFAGSMGQFLLSSGAPGKRFALPHSRVMMHQPSGGIGGTATDIAIQ 160
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ ++ KR + E ++ G+ E +E DRD +A EA D+G+VD+V+
Sbjct: 161 AEQLLFTKRLIQERIAEHTGQPVERIEADSDRDRWFTAEEARDYGLVDRVITR 213
>gi|255325481|ref|ZP_05366583.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311741273|ref|ZP_07715097.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
gi|255297419|gb|EET76734.1| Clp protease [Corynebacterium tuberculostearicum SK141]
gi|311303443|gb|EFQ79522.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
pseudogenitalium ATCC 33035]
Length = 207
Score = 186 bits (473), Expect = 2e-45, Method: Composition-based stats.
Identities = 83/204 (40%), Positives = 136/204 (66%), Gaps = 3/204 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + ++P +EQ+ +G + + YS+L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 QSQMPSSRY--VLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+++P ++I++YINSPGG TA MAIYDTM++++P + T C+GQAAS ++LL+AG G
Sbjct: 61 ESQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGK 120
Query: 127 RFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPN+R+L+HQP+ GQ SD+E A +I ++++ + ++ G+T E++ D
Sbjct: 121 RAALPNSRVLIHQPATQGTQGQVSDLEIQAAEIERMRKLMETTLSEHTGRTAEQIRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G++D V R
Sbjct: 181 RDKILTAQEAVEYGIIDTVFDYRK 204
>gi|227503045|ref|ZP_03933094.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|306836722|ref|ZP_07469685.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
gi|227076106|gb|EEI14069.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49725]
gi|304567400|gb|EFM43002.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
accolens ATCC 49726]
Length = 207
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 135/203 (66%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + ++P +EQ+ +G + + YS+L +ERI+F+ Q++D A I AQLL LE
Sbjct: 4 SQMPSSRY--VLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLE 61
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+++P ++I++YINSPGG TA MAIYDTM++++P + T C+GQAAS ++LL+AG G R
Sbjct: 62 SQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKR 121
Query: 128 FALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
ALPN+R+L+HQP+ GQ SD+E A +I +++ + ++ G+T E++ DR
Sbjct: 122 AALPNSRVLIHQPATQGTQGQVSDLEIQAAEIERMRTLMENTLAEHTGRTAEQIRIDTDR 181
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I++A +A ++G++D V R
Sbjct: 182 DKILTAEDAVEYGIIDTVFEYRK 204
>gi|224179483|ref|YP_002601006.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
gi|217314526|gb|ACK36869.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
Length = 201
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 81/199 (40%), Positives = 134/199 (67%), Gaps = 5/199 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +++L AE+
Sbjct: 1 MPIGVPKVAFRLP-GEPTPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMIYLSAEDE 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I +YINSPGG VT G+A+YD M I+ ++T C+G AASM S +L+ GE+G R ALP
Sbjct: 60 SKRIFIYINSPGGSVTCGLAVYDAMHHIQARVTTLCIGIAASMASFVLAGGERGHRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++R+++HQP GG GQASD+ A+++++I+R++ IY + G++ + K++DRD MS
Sbjct: 120 HSRVMIHQPQGGSQGQASDVTAEAEEVMRIRRQIGRIYAERTGQSLATIAKSMDRDRFMS 179
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA ++G+VD+V S +
Sbjct: 180 AKEAKEFGLVDQVASSGSE 198
>gi|317504964|ref|ZP_07962912.1| ATP-dependent Clp protease, protease subunit [Prevotella salivae
DSM 15606]
gi|315663846|gb|EFV03565.1| ATP-dependent Clp protease, protease subunit [Prevotella salivae
DSM 15606]
Length = 221
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 85/192 (44%), Positives = 135/192 (70%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ + K+IS+
Sbjct: 30 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDSGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G++G R AL ++R+++
Sbjct: 90 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ +E+V K DR++ M++ EA +
Sbjct: 150 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISEHSHTPFEKVWKDSDRNYWMTSQEAKE 209
Query: 198 WGVVDKVLMSRI 209
+G++D+VL+ +
Sbjct: 210 YGMIDEVLVRKK 221
>gi|313900686|ref|ZP_07834179.1| endopeptidase Clp [Clostridium sp. HGF2]
gi|312954748|gb|EFR36423.1| endopeptidase Clp [Clostridium sp. HGF2]
Length = 189
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 91/190 (47%), Positives = 132/190 (69%), Gaps = 1/190 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP ++E+ ER YD+YS LLKERI+ +TG+I+D M++ ICAQLL+L + + + I
Sbjct: 1 MVFVPTIIERNASSERVYDLYSCLLKERIIILTGEIDDAMSSSICAQLLYLSSISSE-PI 59
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYD M++I+ +ST CMG ASM ++LLSAG +G R AL N+ I
Sbjct: 60 QMYINSPGGSVSAGLAIYDIMKYIRCDVSTICMGICASMAAVLLSAGTQGKRSALSNSEI 119
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA D+E A I K+K RL I +N ++ E + + DRD+ M A EA
Sbjct: 120 MIHQPMGGMQGQAKDMEIAALHIQKLKERLYSILSENTRQSNETLRRDCDRDYYMDAKEA 179
Query: 196 CDWGVVDKVL 205
+G++D ++
Sbjct: 180 LSYGLIDAII 189
>gi|38234362|ref|NP_940129.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
diphtheriae NCTC 13129]
gi|67460485|sp|Q6NFU5|CLPP1_CORDI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|38200625|emb|CAE50321.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
diphtheriae]
Length = 209
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/203 (40%), Positives = 135/203 (66%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + + ++P +EQ+ G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 6 MQMPQARY--VLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLE 63
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 64 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKR 123
Query: 128 FALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
LPN+R+L+HQP+ GQ SD+E A++I +++ + + ++ G++ E+V DR
Sbjct: 124 ACLPNSRVLIHQPATQGTQGQVSDLEIQAKEIERMRTLMEQTLARHTGRSAEQVRIDTDR 183
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I++A EA ++G+VD+V R
Sbjct: 184 DKILTAEEAVEYGIVDQVFDYRK 206
>gi|169628672|ref|YP_001702321.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus ATCC 19977]
gi|169240639|emb|CAM61667.1| ATP-dependent Clp protease, proteolytic subunit 1 [Mycobacterium
abscessus]
Length = 217
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 86/211 (40%), Positives = 134/211 (63%), Gaps = 4/211 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
+S + + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I
Sbjct: 2 ISKHLNPELAPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIM 59
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+ +P +EI++YINSPGG T+ MAIYDTMQ+++ I T +GQAAS ++LL+
Sbjct: 60 AQLLVLESLDPDREITMYINSPGGSFTSLMAIYDTMQYVRSDIRTVVLGQAASAAAVLLA 119
Query: 121 AGEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
AG G R ALPNAR+L+HQP SG GQ +D+E A +I +++ ++ G+ E
Sbjct: 120 AGTPGKRMALPNARVLIHQPALSGVIQGQFTDLEIQAAEIERMRVLQETTLARHTGRPAE 179
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E+ K DRD I +A EA ++G++D VL R
Sbjct: 180 EIRKDTDRDKIFTAEEAKEYGIIDVVLEYRK 210
>gi|283457917|ref|YP_003362519.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa
DY-18]
gi|283133934|dbj|BAI64699.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa
DY-18]
Length = 229
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 98/201 (48%), Positives = 145/201 (72%), Gaps = 4/201 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P E+T G + D Y++L ++RI+F+ Q++D A I AQLL LEA++
Sbjct: 18 PSNRY--VLPSFEERTPYGYKRQDPYAKLFEDRIIFLGTQVDDASADDIMAQLLVLEAQD 75
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P+++I+LYINSPGG TA AIYDTMQFI+P I T C+GQAAS ++LL+AG G R AL
Sbjct: 76 PERDITLYINSPGGSFTAMTAIYDTMQFIRPEIQTVCLGQAASAAAVLLAAGTPGKRLAL 135
Query: 131 PNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
PNAR+L+HQP SG GQASDIE HA ++++++ + + GKTYEEV+++++RD+
Sbjct: 136 PNARVLIHQPALSGQQGGQASDIEIHANEVMRMREWTAQTLALHSGKTYEEVDRSIERDN 195
Query: 189 IMSASEACDWGVVDKVLMSRI 209
I++A+ A ++G+VDKVL SR
Sbjct: 196 ILTAAAALEYGLVDKVLESRK 216
>gi|145223175|ref|YP_001133853.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
gilvum PYR-GCK]
gi|145215661|gb|ABP45065.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
gilvum PYR-GCK]
Length = 218
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 126/191 (65%), Gaps = 3/191 (1%)
Query: 20 PMVVEQT--NRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
P+V + + G D +Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I
Sbjct: 19 PVVTDMRGASSGLNLVDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIH 78
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG ++AGMAIYDTM ++T+ MG AASMG LL+AG KG R+ALP+ARIL
Sbjct: 79 LYINSPGGSISAGMAIYDTMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARIL 138
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG +G A+DI A+ IK+ + + + G+T E +E DRD +A EA
Sbjct: 139 MHQPLGGITGGAADIAIQAEQFASIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEAL 198
Query: 197 DWGVVDKVLMS 207
++G VD ++ S
Sbjct: 199 EYGFVDHIITS 209
>gi|229915491|gb|ACQ90835.1| proteolytic subunit 2 of clp protease [Pedinomonas minor]
Length = 199
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 130/192 (67%), Gaps = 3/192 (1%)
Query: 16 LGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + G + D+Y+R+ +ER++F +++D A + +L+L AE+
Sbjct: 1 MPIGVPKVPFRMPGESGAQWVDLYNRMYRERVLFFCQELDDEFANQLIGIMLYLNAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K + +YINSPGG VT G+A+YDTM +IK +ST C+G AASM S +L+ G+KG R ALP+
Sbjct: 61 KPLYIYINSPGGSVTCGIAVYDTMNYIKCGVSTICVGTAASMASFVLAGGDKGNRIALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG GQAS++ ++++++I+R++ IY + G+ + + LDRD +SA
Sbjct: 121 ARIMIHQPEGGSQGQASEVLSESEEVLRIRRQVGRIYAEKTGQPLNRISRDLDRDQFLSA 180
Query: 193 SEACDWGVVDKV 204
EA ++G++DK+
Sbjct: 181 KEAKEYGLIDKI 192
>gi|91216686|ref|ZP_01253651.1| ATP-dependent Clp protease proteolytic subunit 2 [Psychroflexus
torquis ATCC 700755]
gi|91185155|gb|EAS71533.1| ATP-dependent Clp protease proteolytic subunit 2 [Psychroflexus
torquis ATCC 700755]
Length = 224
Score = 186 bits (472), Expect = 2e-45, Method: Composition-based stats.
Identities = 88/192 (45%), Positives = 128/192 (66%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ P ++E+ + D++SRL+ +RI+F+ I D +A +I AQLLFLE+ + K+I
Sbjct: 32 SAMTPNIIEERQMNAVAMDVFSRLMMDRIIFLGLPINDQVANIIQAQLLFLESTDSSKDI 91
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V AG+ IYDTMQFIKP ++T G AASMG++LL AG G R LP++R+
Sbjct: 92 QIYINSPGGSVYAGLGIYDTMQFIKPDVATINTGIAASMGAVLLCAGTAGKRSGLPHSRV 151
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA DIE A I+ +K L I K+ GK+Y+EV + DRD M + A
Sbjct: 152 MIHQPMGGAQGQADDIEITANQIIMLKEELYTIISKHSGKSYDEVYQDGDRDFWMKSDAA 211
Query: 196 CDWGVVDKVLMS 207
++G++D++L
Sbjct: 212 KEYGMIDEILTR 223
>gi|118471482|ref|YP_888936.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
smegmatis str. MC2 155]
gi|118172769|gb|ABK73665.1| Clp protease [Mycobacterium smegmatis str. MC2 155]
Length = 203
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 89/183 (48%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 26 TNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
T +G D +Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I LYINSPGG
Sbjct: 7 TGQGLNLVDSVYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINSPGG 66
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
++AGMAIYDTM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG
Sbjct: 67 SISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGV 126
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+G A+DI A+ IK+ + + + G+ E +E DRD +A EA ++G VD +
Sbjct: 127 TGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAQEALEYGFVDHI 186
Query: 205 LMS 207
+ S
Sbjct: 187 ITS 189
>gi|302551410|ref|ZP_07303752.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
gi|302469028|gb|EFL32121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
Length = 219
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 94/190 (49%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L A +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDHVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAA-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG +TAGMAIYDTMQ+IK + T MG AASMG LLSAG G RFALPNA I
Sbjct: 76 YMYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ K+R+ E+ ++ G+T E++ + DRD A EA
Sbjct: 136 LIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTVEQITRDSDRDRWFDAFEA 195
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 196 KEYGLIDDVI 205
>gi|302560650|ref|ZP_07312992.1| Clp protease [Streptomyces griseoflavus Tu4000]
gi|302478268|gb|EFL41361.1| Clp protease [Streptomyces griseoflavus Tu4000]
Length = 219
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L A +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDQVYNRLLGERIIFLGQPVDDDIANKITAQLLLLAA-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQFIK + T MG AASMG LLSAG G RFALPNA I
Sbjct: 76 YLYINSPGGSITAGMAIYDTMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ K+R+ E+ ++ G++ E++ + DRD A EA
Sbjct: 136 LIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQSVEQITRDSDRDRWFDAFEA 195
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 196 KEYGLIDDVI 205
>gi|284030229|ref|YP_003380160.1| endopeptidase Clp [Kribbella flavida DSM 17836]
gi|283809522|gb|ADB31361.1| Endopeptidase Clp [Kribbella flavida DSM 17836]
Length = 203
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 133/194 (68%), Gaps = 1/194 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P E+T+ G R D Y++L ++RI+F+ I D +A + AQLL L++ + ++
Sbjct: 1 MNYFIPQWEERTSYGMRRIDPYTKLFEDRIIFLGTPITDEIANAVMAQLLCLQSMDSDRD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG TA AIYDT+++IKP + T C+GQAAS ++LL+AG G R ALPN+R
Sbjct: 61 ISIYINSPGGSFTALTAIYDTIRYIKPDVQTVCLGQAASAAAVLLAAGTPGKRLALPNSR 120
Query: 135 ILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
I++HQP+ GQ+SDIE A +I++++ L ++ + GK++EEV + ++RD ++A
Sbjct: 121 IIIHQPATEGTYGQSSDIEIQANEILRLRALLEKMLAEASGKSHEEVSRDIERDKFLTAD 180
Query: 194 EACDWGVVDKVLMS 207
+A ++G++D VL +
Sbjct: 181 QAIEYGLIDDVLQT 194
>gi|260906246|ref|ZP_05914568.1| Endopeptidase Clp [Brevibacterium linens BL2]
Length = 198
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 93/180 (51%), Positives = 130/180 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLKERI+++ ++ D A ICAQ++ L AE+P +ISLYINSPGG VTAGMAIYD
Sbjct: 19 IFNRLLKERIIWLGSEVRDSNANAICAQMMLLAAEDPDADISLYINSPGGSVTAGMAIYD 78
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP +ST MG AASMG LLS+G G R+A P+ARIL+HQP GG G A+DI+
Sbjct: 79 TMQYIKPDVSTVAMGMAASMGQFLLSSGAPGKRYATPHARILMHQPLGGIGGTATDIKIQ 138
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+++ E+ + GKT E++ K DRDH +A EA ++G +DK++ D+ +
Sbjct: 139 AELILHMKKQMAELTAEQTGKTLEQILKDNDRDHWFTAEEALEYGFIDKMVTRSSDVTDN 198
>gi|291297752|ref|YP_003509030.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
gi|290566972|gb|ADD39937.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
Length = 204
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 125/193 (64%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P E G + +RLL++RI+ + +++D +A +CAQLL L AEN + +ISLY
Sbjct: 1 MPSATETPPIGTADDQLSARLLRQRIIVLGTEVDDQVANRLCAQLLLLSAENSRDDISLY 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AGMAIYDTM+ I + T MG AASMG +LL AG G R++LPN+ +LLH
Sbjct: 61 INSPGGSVSAGMAIYDTMRLIPNDVRTVAMGLAASMGQVLLCAGTAGKRYSLPNSHVLLH 120
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
Q S GF G A+D+E +A + ++ R+ E+ ++ G+ E+VEK RD A+EA ++
Sbjct: 121 QGSAGFGGTAADVEIYAGHLERVSARMTELVARHTGQPVEKVEKDSLRDRWFDAAEALEY 180
Query: 199 GVVDKVLMSRIDI 211
G +D ++ D+
Sbjct: 181 GFIDHIVERMDDV 193
>gi|281421760|ref|ZP_06252759.1| Clp protease [Prevotella copri DSM 18205]
gi|281404255|gb|EFB34935.1| Clp protease [Prevotella copri DSM 18205]
Length = 220
Score = 185 bits (471), Expect = 2e-45, Method: Composition-based stats.
Identities = 85/199 (42%), Positives = 138/199 (69%), Gaps = 2/199 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
++ ++ P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++
Sbjct: 24 KAQAQYMN--PYILEERQLNVTQMDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSV 81
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K+IS+Y+NSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G++G R A
Sbjct: 82 DSGKDISIYLNSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSA 141
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LP++R+++HQP GG GQASDIE A++I+K+K+ L I + Y++V DR++
Sbjct: 142 LPHSRVMIHQPLGGVQGQASDIEIEAREILKMKKELYTIISDHSHTPYDKVYADSDRNYW 201
Query: 190 MSASEACDWGVVDKVLMSR 208
M+A EA ++G++D VL+ +
Sbjct: 202 MTAEEAKEYGMIDNVLVRK 220
>gi|21221076|ref|NP_626855.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
coelicolor A3(2)]
gi|289771640|ref|ZP_06531018.1| Clp protease [Streptomyces lividans TK24]
gi|17373508|sp|Q9F315|CLPP1_STRCO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10280519|emb|CAC09995.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
coelicolor A3(2)]
gi|289701839|gb|EFD69268.1| Clp protease [Streptomyces lividans TK24]
Length = 219
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 95/190 (50%), Positives = 130/190 (68%), Gaps = 2/190 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDQVYNRLLGERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IK + T MG AASMG LLSAG G RFALPNA I
Sbjct: 76 FLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEI 135
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ KRR+ E+ ++ G+T E++ + DRD A EA
Sbjct: 136 LIHQPSAGLAGSASDIKIHAERLLHTKRRMAELTSQHTGQTIEQITRDSDRDRWFDAFEA 195
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 196 KEYGLIDDVI 205
>gi|256375241|ref|YP_003098901.1| endopeptidase Clp [Actinosynnema mirum DSM 43827]
gi|255919544|gb|ACU35055.1| Endopeptidase Clp [Actinosynnema mirum DSM 43827]
Length = 209
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 141/200 (70%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P VE+T+ G + + Y++L +ERI+F+ Q++D A + AQLL LE+++
Sbjct: 7 PQARY--VLPSFVERTSYGVKESNPYNKLFEERIIFLGVQVDDTSANDVMAQLLVLESDD 64
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P ++I +YINSPGG TA MAIYDTMQF++P I T C+GQA+S ++LL+AG G R AL
Sbjct: 65 PDRDIYMYINSPGGSFTALMAIYDTMQFVRPDIRTVCLGQASSAAAVLLAAGTPGKRTAL 124
Query: 131 PNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+++HQP+ G GQ SD+E A +I +++ ++ E ++ G+T E+V +DRD I
Sbjct: 125 PNARVMIHQPAMGGVRGQVSDLEIQAAEITRMRTQMEEALSRHTGRTVEQVHTDIDRDRI 184
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A+EA ++G++D+V+ R
Sbjct: 185 LTAAEAQEYGIIDEVMPYRK 204
>gi|320534808|ref|ZP_08035227.1| Clp protease [Actinomyces sp. oral taxon 171 str. F0337]
gi|320132987|gb|EFW25516.1| Clp protease [Actinomyces sp. oral taxon 171 str. F0337]
Length = 212
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 94/181 (51%), Positives = 129/181 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQ+L L AE+P+++I LYINSPGG VTAGMAI D
Sbjct: 29 IYNRLLKERIIWLGSEVRDDNANAICAQMLLLAAEDPERDIYLYINSPGGSVTAGMAILD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM++++P ++T G AASMG LLSAG KG R+ P+AR+L+HQPSGG G A+DI +
Sbjct: 89 TMEYVQPDVATVATGLAASMGQHLLSAGAKGKRYLTPHARVLMHQPSGGAGGSATDIRIN 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+K+K+ L EI N G T EE+ DRDH SA EA ++G VD ++ S +I ++
Sbjct: 149 ADLIIKMKQELAEITAANTGHTVEEIIADSDRDHWFSAQEALEYGFVDHIVRSSREIGKQ 208
Query: 215 S 215
+
Sbjct: 209 N 209
>gi|70699877|gb|AAZ06846.1| ClpP2 [Microbacterium arborescens]
Length = 208
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 92/197 (46%), Positives = 134/197 (68%), Gaps = 2/197 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++R++F+ Q++D A + AQLL LE+++P ++I +
Sbjct: 7 ILPQFEERTAYGYKRQDPYNKLFEDRVIFLGVQVDDASADDVMAQLLVLESQDPDRDIIM 66
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ++ P I T +GQAAS S+LL+AG G R ALPNARIL+
Sbjct: 67 YINSPGGSFTAMTAIYDTMQYVSPQIQTVVLGQAASAASVLLAAGAPGKRLALPNARILI 126
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQASDIE A +I++++ L E ++ +T E+V K +DRD I+SA EA
Sbjct: 127 HQPAVGEAGHGQASDIEIQAAEILRMRTWLEETMARHTNRTQEQVNKDIDRDKILSAHEA 186
Query: 196 CDWGVVDKVLMSRIDIE 212
++G+VD+VL SR
Sbjct: 187 MEYGIVDQVLTSRKRTP 203
>gi|326800212|ref|YP_004318031.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
sp. 21]
gi|326550976|gb|ADZ79361.1| ATP-dependent Clp protease proteolytic subunit [Sphingobacterium
sp. 21]
Length = 225
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 139/204 (68%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+F+ + + +V+ + P + E+ D++SRL+ +RI+F+ ++D +A +I A
Sbjct: 17 TFDQYERWFNRNVYASMTPYITEERQLNVAQMDVFSRLMIDRIIFLGEAVDDRVANIIQA 76
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLLFL++ +P K+I LYIN PGG V AG+ IYDTMQ+I P ++T C G A S G++LL A
Sbjct: 77 QLLFLQSTDPHKDIQLYINCPGGSVYAGLGIYDTMQYITPDVATICTGIALSFGAVLLCA 136
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R AL +AR+++HQPSGG G A+D+E +A++I+K+++ L +I + G++YE V
Sbjct: 137 GTDKKRAALKHARVMIHQPSGGMQGTAADLEINAREILKLQKELYQIIADHSGQSYEWVH 196
Query: 182 KTLDRDHIMSASEACDWGVVDKVL 205
+ +RD+ M+A EA +G++D+VL
Sbjct: 197 TSSNRDYWMTAEEAKGYGMIDEVL 220
>gi|297562335|ref|YP_003681309.1| endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846783|gb|ADH68803.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 219
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 93/206 (45%), Positives = 139/206 (67%), Gaps = 3/206 (1%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
G A + + ++P VE+T+ G + + Y++L +ERI+FV QI+D A + AQL+
Sbjct: 11 GAASMAPQGRY--VLPSYVERTSYGVKEMNPYNKLFEERIIFVGVQIDDTSANDLMAQLI 68
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
LE + +++I +YINSPGG T+ MAIYDTMQF++P I T C+GQAAS ++LL+ G +
Sbjct: 69 TLEQLDSERDIQMYINSPGGSFTSLMAIYDTMQFVRPDIQTVCIGQAASAAAILLAGGTE 128
Query: 125 GMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
G R ALPNARIL+HQP+ GQASDIE A +I +I+ +L ++ G++ E+V K
Sbjct: 129 GKRGALPNARILIHQPATEGMHGQASDIEIQANEITRIRTQLETTLARHTGRSVEQVSKD 188
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
++RD I++A EA D+G++D VL R
Sbjct: 189 IERDKILTAEEAKDYGIIDFVLPYRK 214
>gi|326330782|ref|ZP_08197083.1| Clp protease [Nocardioidaceae bacterium Broad-1]
gi|325951312|gb|EGD43351.1| Clp protease [Nocardioidaceae bacterium Broad-1]
Length = 201
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 132/194 (68%), Gaps = 1/194 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P E+T+ G R D Y++L ++RI+++ I D +A + AQLL L++ NP ++
Sbjct: 1 MNYYIPQWEERTSYGVRRIDPYAKLFEDRIIYLGTPISDDVANAVIAQLLCLQSMNPDQD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
IS+YINSPGG TA AIYDTMQFIKP + T C+GQAAS ++LL AG KG R ALPN+R
Sbjct: 61 ISIYINSPGGSFTACTAIYDTMQFIKPDVQTVCIGQAASAAAILLGAGAKGKRMALPNSR 120
Query: 135 ILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQP GQ SDIE A +I++++ L ++ + GK+ +EV ++RD I++A+
Sbjct: 121 ILIHQPYTEGTFGQTSDIEIQANEILRMRELLEKMIADHSGKSMDEVSHDIERDKILTAA 180
Query: 194 EACDWGVVDKVLMS 207
+A ++G++D VL S
Sbjct: 181 QAVEYGLIDSVLES 194
>gi|319953653|ref|YP_004164920.1| ATP-dependent clp protease proteolytic subunit [Cellulophaga
algicola DSM 14237]
gi|319422313|gb|ADV49422.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga
algicola DSM 14237]
Length = 226
Score = 185 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 131/194 (67%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ + D++SRL+ +RI+F+ I D +A ++ AQLLFLE+ + K+I
Sbjct: 33 NMTPNIIEERQLNAIAMDVFSRLMMDRIIFLGTGINDQVANIVQAQLLFLESADASKDIQ 92
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQ+IKP ++T C G AASMG++LL AGEKG R L ++R++
Sbjct: 93 IYINSPGGSVYAGLGIYDTMQYIKPDVATICTGMAASMGAVLLCAGEKGKRSGLTHSRVM 152
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A++I+K+K L EI + E+V DRD+ M A EA
Sbjct: 153 IHQPMGGAQGQASDIEITAREILKLKDELYEIIALHSNHDIEKVRDDSDRDYWMKADEAK 212
Query: 197 DWGVVDKVLMSRID 210
+G++D++L+
Sbjct: 213 VYGMIDEILVRETK 226
>gi|300728339|ref|ZP_07061704.1| Clp protease [Prevotella bryantii B14]
gi|299774404|gb|EFI71031.1| Clp protease [Prevotella bryantii B14]
Length = 222
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 132/192 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ + K+IS+
Sbjct: 31 LNPYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDSGKDISI 90
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL +G++G R AL ++R+++
Sbjct: 91 YINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGQEGKRSALTHSRVMI 150
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I + YE+V + DR++ M+A EA +
Sbjct: 151 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISNHSHTPYEKVWQDSDRNYWMNAEEAKE 210
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 211 YGMIDTVLTRKK 222
>gi|311743055|ref|ZP_07716863.1| ATP-dependent Clp protease proteolytic subunit [Aeromicrobium
marinum DSM 15272]
gi|311313735|gb|EFQ83644.1| ATP-dependent Clp protease proteolytic subunit [Aeromicrobium
marinum DSM 15272]
Length = 192
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 94/177 (53%), Positives = 127/177 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLLKERIVF+ ++ + A ICAQ+L L AE+P +ISLYINSPGG V AGMAIYD
Sbjct: 14 IYQRLLKERIVFLGSEVRNDNANAICAQMLLLSAEDPTSDISLYINSPGGSVDAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI ++TF MG AASMG LL+AG KG R+ALP+ARI++HQPSGG G ASDI+
Sbjct: 74 TMQFISNDVATFGMGLAASMGQFLLAAGTKGKRYALPHARIMMHQPSGGIGGSASDIKIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ + +K++LNE+ + G+T E+VE DRD + +A ++G +D V+ + ++
Sbjct: 134 AEQSILLKKQLNELQSLHTGQTLEQVEIDADRDRWFTPQQALEYGFIDHVVATAGEV 190
>gi|225453100|ref|XP_002271649.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 320
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 78/174 (44%), Positives = 124/174 (71%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D + LL++RIVF+ Q++D A L+ +QLLFL+AE+ +K+I L+INSPGG VTAG+ I
Sbjct: 80 LDTTNMLLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGI 139
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD M+ K +ST C+G AASMG+ LL++G KG RF +PN+R+++HQP G G+A+++
Sbjct: 140 YDAMKLCKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMG 199
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I + GK +++E DRD+ M+A EA ++G++D V+
Sbjct: 200 IRIREMMYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAWEAKEYGLIDAVID 253
>gi|172041059|ref|YP_001800773.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
urealyticum DSM 7109]
gi|171852363|emb|CAQ05339.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
urealyticum DSM 7109]
Length = 206
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/203 (42%), Positives = 134/203 (66%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K E + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 1 MKMPESRY--ILPSFVEHSSYGAKESNPYNKLFEERIIFLGTQVDDAAANDIMAQLLVLE 58
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 59 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGTPGKR 118
Query: 128 FALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
ALPNAR+L+HQP+ G GQ SD+E A +I ++++ + ++ GKT E++ DR
Sbjct: 119 AALPNARVLIHQPASGGVQGQVSDLEIQANEIERMRKLMETTLARHTGKTEEQIRIDTDR 178
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I+ A A ++G++D+V R
Sbjct: 179 DKILDAEAAKEYGIIDQVFEYRK 201
>gi|307701831|ref|ZP_07638845.1| endopeptidase Clp [Mobiluncus mulieris FB024-16]
gi|307613089|gb|EFN92344.1| endopeptidase Clp [Mobiluncus mulieris FB024-16]
Length = 230
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 87/193 (45%), Positives = 135/193 (69%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RIVF+ Q++D+ A + AQLL LE+++P I++
Sbjct: 34 ILPTFEERTAYGYKRQDSYAKLFEDRIVFLGEQVDDNSADDVMAQLLVLESQDPDSLITM 93
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+ G G R ALPNAR+L+
Sbjct: 94 YINSPGGSFTAMTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAGGSPGKRLALPNARVLI 153
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQA+D+ A++I +++ L E K+ G+T E++ + +DRD I++A++A
Sbjct: 154 HQPAIQGAQGQATDLAIIAEEIDRMRAWLEETLSKHSGRTLEQMHEDIDRDKILTAAQAK 213
Query: 197 DWGVVDKVLMSRI 209
++G++D+VL R
Sbjct: 214 EYGLIDQVLSPRK 226
>gi|296118750|ref|ZP_06837326.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
gi|295968239|gb|EFG81488.1| Clp protease [Corynebacterium ammoniagenes DSM 20306]
Length = 207
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 135/202 (66%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
K + ++P +EQ+ +G + + YS+L +ERI+F+ Q++D A I AQLL LE
Sbjct: 5 KMPSSRY--VLPSFIEQSAQGTKETNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVLEG 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+P ++I++YINSPGG TA MAIYDTM++++P + T C+GQAAS ++LL+AG G R
Sbjct: 63 MDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGKRA 122
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+R+L+HQP+ GQ SD+E A +I +++R + ++ G+T E+V DRD
Sbjct: 123 ALPNSRVLIHQPATQGTQGQVSDLEIQAAEIERMRRLMENTLAEHTGRTAEQVRIDTDRD 182
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA ++G++D+V R
Sbjct: 183 KILTAEEAVEYGIIDQVFDYRK 204
>gi|227504046|ref|ZP_03934095.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
gi|227199376|gb|EEI79424.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
striatum ATCC 6940]
Length = 207
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 133/204 (65%), Gaps = 1/204 (0%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
++P +EQ +G ++ + YS+L +ERI+F+ Q++D A I AQLL L
Sbjct: 1 MSNLQMPNSRYVLPEFIEQNAQGSKTTNPYSKLFEERIIFLGTQVDDTSANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+++P ++I++YINSPGG TA MAIYDTM++++P + T C+GQAAS ++LL+AG G
Sbjct: 61 ESQDPDRDITMYINSPGGSFTALMAIYDTMRYVRPDVQTVCLGQAASAAAVLLAAGAPGK 120
Query: 127 RFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPN+R+L+HQP GQ SD+E A +I +++R + ++ G+T E+V D
Sbjct: 121 RAALPNSRVLIHQPRTQGTQGQVSDLEIEANEIERMRRLMENTLAEHTGRTAEQVRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G++D V R
Sbjct: 181 RDKILTAHEAVEYGLIDTVFDYRK 204
>gi|311113765|ref|YP_003984987.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa
ATCC 17931]
gi|310945259|gb|ADP41553.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa
ATCC 17931]
Length = 224
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 97/203 (47%), Positives = 145/203 (71%), Gaps = 4/203 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + ++P E+T G + D Y++L ++RI+F+ Q++D A I AQLL LEA
Sbjct: 11 QMPSNRY--VLPSFEERTPYGYKRQDPYAKLFEDRIIFLGTQVDDASADDIMAQLLVLEA 68
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
++P ++I+LYINSPGG TA AIYDTMQFI+P I T C+GQAAS ++LL+AG G R
Sbjct: 69 QDPDRDITLYINSPGGSFTAMTAIYDTMQFIRPEIQTVCLGQAASAAAVLLAAGTPGKRL 128
Query: 129 ALPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
ALPNAR+L+HQP SG GQASD+E HA ++++++ + + GKTYEEV+++++R
Sbjct: 129 ALPNARVLIHQPALSGQQGGQASDLEIHANEVMRMREWTAQTLALHSGKTYEEVDRSIER 188
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D+I++A+ A ++G+VDKVL SR
Sbjct: 189 DNILTAAAAQEYGLVDKVLDSRK 211
>gi|296170472|ref|ZP_06852060.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894943|gb|EFG74664.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 214
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE+
Sbjct: 9 QPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESL 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G R A
Sbjct: 67 DPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMA 126
Query: 130 LPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPNAR+L+HQPS GQ SD+E A +I +++ + ++ GK V K DRD
Sbjct: 127 LPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATVRKDTDRD 186
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA ++G++D VL R
Sbjct: 187 KILTADEAKEYGIIDTVLEYRK 208
>gi|120404994|ref|YP_954823.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
vanbaalenii PYR-1]
gi|119957812|gb|ABM14817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
vanbaalenii PYR-1]
Length = 194
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 119/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I LYINSPGG ++AGMAIYD
Sbjct: 14 VYERLLSERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINSPGGSISAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM ++T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 74 TMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGITGGAADIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+T E +E DRD +A EA ++G VD ++ S
Sbjct: 134 AEQFAVIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEYGFVDHIITS 186
>gi|108800544|ref|YP_640741.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
MCS]
gi|119869683|ref|YP_939635.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
KMS]
gi|126436160|ref|YP_001071851.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium sp.
JLS]
gi|108770963|gb|ABG09685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. MCS]
gi|119695772|gb|ABL92845.1| ATP-dependent Clp protease proteolytic subunit ClpP / ClpP1
peptidase, Serine peptidase, MEROPS family S14
[Mycobacterium sp. KMS]
gi|126235960|gb|ABN99360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. JLS]
Length = 195
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 119/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I LYINSPGG ++AGMAIYD
Sbjct: 14 VYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINSPGGSISAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM ++T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 74 TMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGITGGAADIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+T E +E DRD +A EA ++G VD ++ S
Sbjct: 134 AEQFAAIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEYGFVDHIITS 186
>gi|290960370|ref|YP_003491552.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
scabiei 87.22]
gi|260649896|emb|CBG73012.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
scabiei 87.22]
Length = 207
Score = 185 bits (470), Expect = 3e-45, Method: Composition-based stats.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 2/192 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L A +P K
Sbjct: 1 MTNLMPSAAGEPSIGGGLGDQVYNRLLNERIIFLGQPVDDDIANKITAQLLLLAA-DPDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG +TAGMAIYDTMQFIK + T MG AASMG LLSAG G RFALPNA
Sbjct: 60 DIYLYINSPGGSITAGMAIYDTMQFIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNA 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQPS G +G ASDI+ HA+ ++ K+R+ E+ ++ G+T E+V + DRD A
Sbjct: 120 EILIHQPSAGLAGSASDIKIHAERLLHTKKRMAELTSQHTGQTVEQVTRDSDRDRWFDAF 179
Query: 194 EACDWGVVDKVL 205
EA ++G++D V+
Sbjct: 180 EAKEYGLIDDVI 191
>gi|254392448|ref|ZP_05007629.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
clavuligerus ATCC 27064]
gi|197706116|gb|EDY51928.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
clavuligerus ATCC 27064]
Length = 204
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 127/192 (66%), Gaps = 1/192 (0%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P + + + G +YSRLL ERI+F+ Q++D +A I AQ+L L A +P+K+
Sbjct: 1 MTNPMPYLAGEPSLGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQMLLLAA-DPEKD 59
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALP+
Sbjct: 60 IFLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTPGKRFALPHTD 119
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
IL+HQ S G G ASDI+ A+ +++ K+R+ EI ++ G+T E + + DRD +A E
Sbjct: 120 ILMHQGSAGLGGTASDIKIQAEYLLRTKQRMAEITARHSGQTVEAIIRDGDRDRWFTAEE 179
Query: 195 ACDWGVVDKVLM 206
A ++G++D+++
Sbjct: 180 AREYGLIDEIIT 191
>gi|304383401|ref|ZP_07365867.1| ATP-dependent Clp protease proteolytic subunit [Prevotella marshii
DSM 16973]
gi|304335569|gb|EFM01833.1| ATP-dependent Clp protease proteolytic subunit [Prevotella marshii
DSM 16973]
Length = 224
Score = 185 bits (470), Expect = 4e-45, Method: Composition-based stats.
Identities = 86/192 (44%), Positives = 133/192 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++ + K+IS+
Sbjct: 33 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDSGKDISI 92
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R AL ++R+++
Sbjct: 93 YINSPGGSVTAGLGIYDTMQFITSDVATICTGMAASMAAVLLVAGQEGKRSALTHSRVMI 152
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K K+ L I ++ +E+V + DR++ M+A EA +
Sbjct: 153 HQPLGGVQGQASDIEIEAKEIQKFKKELYTIISEHSHTPFEKVWQDSDRNYWMNAEEAKE 212
Query: 198 WGVVDKVLMSRI 209
+G++D VL +
Sbjct: 213 YGMIDAVLKRKQ 224
>gi|111223669|ref|YP_714463.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Frankia alni ACN14a]
gi|111151201|emb|CAJ62912.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
(partial match) [Frankia alni ACN14a]
Length = 204
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 84/178 (47%), Positives = 116/178 (65%)
Query: 36 YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ RLL+ RIVF+ +ED +A I A+LL L AE+P +I LYINSPGG V+AGMAIYDT
Sbjct: 2 FGRLLENRIVFLGAVVEDAVANAISAKLLLLAAEDPTSDIHLYINSPGGSVSAGMAIYDT 61
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
MQ++ ++T +G A SMG LL AG G R+ALP+ARI++HQP GG G A+DI A
Sbjct: 62 MQYVGNDVATVALGFAGSMGQFLLCAGAAGKRYALPHARIMMHQPHGGIGGTAADISIQA 121
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ ++ KR L + + G+T E++E DRD +A EA D+G+VD V+ +
Sbjct: 122 EQMLYTKRTLQQRIAFHSGQTVEQIEADSDRDRWFTAEEARDYGLVDHVVERADQVPS 179
>gi|19553609|ref|NP_601611.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|62391253|ref|YP_226655.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum ATCC 13032]
gi|145296393|ref|YP_001139214.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
glutamicum R]
gi|25008292|sp|Q8NN02|CLPP1_CORGL RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|21325182|dbj|BAB99804.1| Protease subunit of ATP-dependent Clp proteases [Corynebacterium
glutamicum ATCC 13032]
gi|41326593|emb|CAF21075.1| ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT CLPP2
[Corynebacterium glutamicum ATCC 13032]
gi|140846313|dbj|BAF55312.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 208
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 86/193 (44%), Positives = 131/193 (67%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +EQ+ G + + Y++L +ERI+F+ Q++D A I AQLL LE +P ++I+L
Sbjct: 13 VLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGMDPDRDITL 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R LPN+R+L+
Sbjct: 73 YINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKRAVLPNSRVLI 132
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SD+E A +I +++R + ++ GKT E++ DRD I++A EA
Sbjct: 133 HQPATQGTQGQVSDLEIQAAEIERMRRLMETTLAEHTGKTAEQIRIDTDRDKILTAEEAL 192
Query: 197 DWGVVDKVLMSRI 209
++G+VD+V R
Sbjct: 193 EYGIVDQVFDYRK 205
>gi|296139184|ref|YP_003646427.1| endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
gi|296027318|gb|ADG78088.1| Endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
Length = 197
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 123/178 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+YSRLL+ RI+F+ ++ D +A +CAQ+L L AE+P K+I+LYINSPGG ++AGMAI+D
Sbjct: 20 VYSRLLESRIIFLGSEVNDDIANQLCAQMLLLSAEDPSKDINLYINSPGGSISAGMAIFD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM+F++ ++T+ MG AASMG LL+AG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 80 TMEFVECDVATYAMGMAASMGEFLLAAGAKGKRYALPHARIMMHQPSAGIGGTAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ K +N + + G+ E++E DRD +A +A D+G VD V+ ++
Sbjct: 140 AELFRNTKVEMNRLNAQFTGQPIEKIEADADRDKWFTAEQARDYGFVDHVVSRASSVK 197
>gi|291298892|ref|YP_003510170.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
gi|290568112|gb|ADD41077.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
Length = 207
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/179 (47%), Positives = 121/179 (67%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
+++RLLKERIVF+ ++ +A + AQLL L A++P+++I+LYINSPGG V GMAIY
Sbjct: 22 MVFNRLLKERIVFMGTEVNSQVANRVSAQLLLLAADDPERDINLYINSPGGSVYDGMAIY 81
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTMQFI ++T MG AASMG LLL AG G R+ALP+ARI++HQPSGG G ASD+
Sbjct: 82 DTMQFISNDVATIAMGMAASMGQLLLCAGTPGKRYALPHARIMMHQPSGGIGGTASDVAI 141
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A+ + K+ E + G+T +E+E+ DRD +A EA ++G +D+V+ +
Sbjct: 142 LAEQMAYTKKMFQERVSTHTGRTLDEIERDSDRDRWFTAEEAKEYGFIDQVITGAGQVP 200
>gi|70699878|gb|AAZ06847.1| ClpP1 [Microbacterium arborescens]
Length = 194
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 93/180 (51%), Positives = 124/180 (68%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
+ ++ RLLK+RI+++ ++ D A ICA++L L AE+ +K+I LYINSPGG +TAGMA
Sbjct: 7 ATSVFDRLLKDRIIWLGSEVRDENANEICAKILLLAAEDSEKDIYLYINSPGGSITAGMA 66
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTMQF+ I T +G AASMG LLL+AG KG R+ PNAR+LLHQP GGF G ASDI
Sbjct: 67 IYDTMQFVPNDIVTVGIGMAASMGQLLLTAGTKGKRYITPNARVLLHQPHGGFGGTASDI 126
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ AQ I+ +KRRL EI GK+ E++ DRD +A EA ++G VD + S D+
Sbjct: 127 QTQAQLILDMKRRLAEITAAQTGKSVEQINADGDRDRWFTAQEALEYGFVDHIRESATDV 186
>gi|296139185|ref|YP_003646428.1| endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
gi|296027319|gb|ADG78089.1| Endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
Length = 222
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 79/198 (39%), Positives = 126/198 (63%), Gaps = 3/198 (1%)
Query: 19 VPMVVEQTNRGE-RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+ GE R D Y++L ERI+F+ QI++ A + AQLL LE+++P ++I++
Sbjct: 25 IPQFFERAANGEQRVMDPYAKLFDERIIFLKTQIDEVSANDVMAQLLVLESQDPDRDITI 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG + + IYDTMQ++ ++T +G AAS ++LL+ G G R ALPN+ +L+
Sbjct: 85 YINSPGGSLYDALGIYDTMQYVHCDVATVVLGTAASAAAILLAGGTPGKRAALPNSTVLI 144
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP GQ SD+E A ++ + + RL+EI + G+T E++ K DRD+I++A +A
Sbjct: 145 HQPRTGGAMRGQVSDLEIQAAEMERARNRLDEILASHTGQTVEQIRKDTDRDNILTADQA 204
Query: 196 CDWGVVDKVLMSRIDIEE 213
++G+VD V R +
Sbjct: 205 KEYGIVDTVFPYRKASAK 222
>gi|331695807|ref|YP_004332046.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326950496|gb|AEA24193.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 219
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 85/181 (46%), Positives = 122/181 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RI+ + Q++D +A I AQ+L L AE+P +I+LYINSPGG VTAGMAI+D
Sbjct: 31 VYERLLQQRIIVLGQQVDDDIANRIAAQMLLLSAEDPTADIALYINSPGGSVTAGMAIFD 90
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM+FI+ ++T+ MG AASMG LLSAG +G R+ALP+ +IL+HQPS G G SDI
Sbjct: 91 TMEFIECDVATYAMGLAASMGQFLLSAGTRGKRYALPHCQILMHQPSAGVGGTESDIAIQ 150
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ + KR + E+ + G+T E++ DRD SA EA ++G VD V+ + +
Sbjct: 151 AELFRRHKREMAELIAGHTGQTVEKITADFDRDRWFSAQEALEYGFVDHVISRAGQLPDA 210
Query: 215 S 215
+
Sbjct: 211 A 211
>gi|294812618|ref|ZP_06771261.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
gi|326440934|ref|ZP_08215668.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294325217|gb|EFG06860.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
Length = 200
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 87/188 (46%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P + + + G +YSRLL ERI+F+ Q++D +A I AQ+L L A +P+K+I LY
Sbjct: 1 MPYLAGEPSLGGLGDQVYSRLLGERIIFLGQQVDDDIANKITAQMLLLAA-DPEKDIFLY 59
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALP+ IL+H
Sbjct: 60 INSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTPGKRFALPHTDILMH 119
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
Q S G G ASDI+ A+ +++ K+R+ EI ++ G+T E + + DRD +A EA ++
Sbjct: 120 QGSAGLGGTASDIKIQAEYLLRTKQRMAEITARHSGQTVEAIIRDGDRDRWFTAEEAREY 179
Query: 199 GVVDKVLM 206
G++D+++
Sbjct: 180 GLIDEIIT 187
>gi|225021669|ref|ZP_03710861.1| hypothetical protein CORMATOL_01697 [Corynebacterium matruchotii
ATCC 33806]
gi|305680976|ref|ZP_07403783.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
gi|224945660|gb|EEG26869.1| hypothetical protein CORMATOL_01697 [Corynebacterium matruchotii
ATCC 33806]
gi|305659181|gb|EFM48681.1| endopeptidase Clp [Corynebacterium matruchotii ATCC 14266]
Length = 212
Score = 185 bits (469), Expect = 4e-45, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P +EQ+ G + + Y++L +ERI+F+ Q++D A I AQLL LE +P ++I++
Sbjct: 17 VLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEGLDPDRDITM 76
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 77 YINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKRAALPNARVLI 136
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQ SD+E A +I +++ + E ++ G++ E++ + DRD I++A EA
Sbjct: 137 HQPATEGARGQVSDLEIQAAEIQRMRTLMEETLARHTGRSAEQISEDTDRDKILTAQEAL 196
Query: 197 DWGVVDKVLMSRI 209
++G++D+V R
Sbjct: 197 EYGIIDQVFDYRK 209
>gi|309777267|ref|ZP_07672229.1| Clp protease [Erysipelotrichaceae bacterium 3_1_53]
gi|308914947|gb|EFP60725.1| Clp protease [Erysipelotrichaceae bacterium 3_1_53]
Length = 189
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 131/190 (68%), Gaps = 1/190 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ VP ++E+ ER YD+YS LLKERI+ +TG+I+D M++ ICAQLL+L + N + I
Sbjct: 1 MVFVPTIIERNASSERVYDLYSCLLKERIIILTGEIDDAMSSSICAQLLYLSSMNNE-PI 59
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG V+AG+AIYD M++I+ +ST CMG ASM ++LLSAG +G R AL N+ I
Sbjct: 60 QMYINSPGGSVSAGLAIYDIMKYIRCDVSTICMGICASMAAVLLSAGTRGKRSALSNSEI 119
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG GQA D+E A I K+K RL I +N + E + + DRD M ASEA
Sbjct: 120 MIHQPMGGMQGQAKDMEIAALHIQKLKERLYSILSENTHQNIETLRQDCDRDCYMDASEA 179
Query: 196 CDWGVVDKVL 205
+G++D ++
Sbjct: 180 LAYGLIDTII 189
>gi|255070963|ref|XP_002507563.1| endopeptidase clp chloroplast precursor [Micromonas sp. RCC299]
gi|226522838|gb|ACO68821.1| endopeptidase clp chloroplast precursor [Micromonas sp. RCC299]
Length = 270
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 86/186 (46%), Positives = 129/186 (69%), Gaps = 5/186 (2%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V Q + D + LL+ERIVF+ Q++D A + +QLL L+A++P+K+I L+I
Sbjct: 56 PVVPRQ-----DAADPFGLLLRERIVFLGNQVDDFTADAVISQLLLLDAQDPKKDIKLFI 110
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGM IYD MQ + +ST CMG AASMG+ LL++G +G R ++PNARI++HQ
Sbjct: 111 NSPGGSVTAGMGIYDAMQMCRADVSTVCMGLAASMGAFLLTSGARGKRLSMPNARIMIHQ 170
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG SGQA DIE A++I+ K LN + + G+ +++++ DRD MS EA ++G
Sbjct: 171 PLGGASGQAVDIEIQAKEIMYHKANLNRLMAFHTGQDVKQIDEDTDRDRYMSPLEAKNYG 230
Query: 200 VVDKVL 205
++D+++
Sbjct: 231 IIDEII 236
>gi|319900084|ref|YP_004159812.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacteroides
helcogenes P 36-108]
gi|319415115|gb|ADV42226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacteroides
helcogenes P 36-108]
Length = 220
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 132/191 (69%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
L P ++E+ D++SRL+ +RI+F+ QI+D+ A + AQLL+L++ +P K+IS+
Sbjct: 30 LNPYILEERQLNVTQLDVFSRLMMDRIIFLGTQIDDYTANTLQAQLLYLDSVDPGKDISI 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG+ IYDTMQFI ++T C G AASM ++LL +G + R AL ++R+++
Sbjct: 90 YINSPGGSVYAGLGIYDTMQFISSDVATICTGMAASMAAVLLVSGAESKRSALTHSRVMI 149
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG GQASDIE A++I K+K+ L I + +++V DRD+ M+A EA +
Sbjct: 150 HQPMGGAQGQASDIEITAREIQKLKKELYAIIADHSHTDFDKVWADSDRDYWMTAQEAKE 209
Query: 198 WGVVDKVLMSR 208
+G+VD+VL+ +
Sbjct: 210 YGMVDEVLIKK 220
>gi|255644732|gb|ACU22868.1| unknown [Glycine max]
Length = 270
Score = 185 bits (469), Expect = 5e-45, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 125/201 (62%), Gaps = 8/201 (3%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
S +P E D + LL++RI+F+ Q++D A I +QLLF
Sbjct: 60 SPHDFSASTASPWLPRFEE--------LDATNMLLRQRIIFLGSQVDDMTADFIISQLLF 111
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+AE+ +K+I L+INSPGG VTAGM IYD M+ K +ST C+G AASMG+ +L++G KG
Sbjct: 112 LDAEDSKKDIKLFINSPGGSVTAGMGIYDAMKLCKADVSTVCLGLAASMGAFILASGTKG 171
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ +PN+R+++HQP G G+A+++ +++ K ++N+I + GK E++E D
Sbjct: 172 KRYCMPNSRVMIHQPLGTAGGKATEMSIRIREMAYHKIKINKILSRITGKPEEQIELDTD 231
Query: 186 RDHIMSASEACDWGVVDKVLM 206
RD+ M+ EA ++G+VD V+
Sbjct: 232 RDNFMNPWEAKEYGLVDGVID 252
>gi|318060125|ref|ZP_07978848.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp.
SA3_actG]
gi|318076383|ref|ZP_07983715.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces sp.
SA3_actF]
Length = 218
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 20 IVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 79
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 80 YINSPGGSMTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGAPGKRMALPNARVLI 139
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A++I++++ +L ++ K+ E++ ++RD I++A +A
Sbjct: 140 HQPSSQTGREQLSDLEIAAKEIMRMRTQLEDMLAKHSTTPIEKIRDDIERDKILTAEDAL 199
Query: 197 DWGVVDKVLMSRI 209
+G+VD++ R
Sbjct: 200 AYGLVDQITTPRK 212
>gi|134097947|ref|YP_001103608.1| ATP-dependent Clp protease proteolytic subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|291009143|ref|ZP_06567116.1| ATP-dependent Clp protease proteolytic subunit [Saccharopolyspora
erythraea NRRL 2338]
gi|133910570|emb|CAM00683.1| ATP-dependent Clp protease proteolytic subunit 2 [Saccharopolyspora
erythraea NRRL 2338]
Length = 210
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 84/204 (41%), Positives = 140/204 (68%), Gaps = 3/204 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P VE+T G + + Y++L +ERIVF+ Q++D A + AQLLFL
Sbjct: 3 PYQSLQSRY--VLPSFVERTAYGVKESNPYNKLFEERIVFLGVQVDDASANDVMAQLLFL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E+++P +EI +YINSPGG TA MAIYDT+Q+++P + T C+GQAAS +++L+AG KG
Sbjct: 61 ESDDPDREIQIYINSPGGSFTALMAIYDTIQYVRPDVRTICLGQAASAAAVILAAGTKGK 120
Query: 127 RFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPN+R+L+HQP+ GQ SD+E A ++ +++ ++ ++ +T E+V K ++
Sbjct: 121 RLALPNSRMLIHQPATEGIYGQVSDLEIQAAEVQRMRDQMEATLARHTNRTQEQVRKDVE 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A +A ++G++D+VL R
Sbjct: 181 RDKILTADQAVEYGIIDEVLPYRK 204
>gi|317508500|ref|ZP_07966167.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
gi|316253191|gb|EFV12594.1| Clp protease [Segniliparus rugosus ATCC BAA-974]
Length = 200
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 124/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ +++D +A +CAQ+L L AE+P K+ISLYINSPGG ++AGMAIYD
Sbjct: 21 VFERLLRERIIFLGSEVDDDIANRLCAQILLLTAEDPTKDISLYINSPGGSISAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ + ++T+ MG AASMG LL+AG KG RFALP+ARI++HQPS G G A+DI
Sbjct: 81 TMQLSECEVATYAMGMAASMGQFLLAAGAKGKRFALPHARIMMHQPSAGIYGAAADIAIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ + K+ + + + G+T E++ + +RD +A+EA D+G VD V+ I
Sbjct: 141 AEQLAATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKDYGFVDHVISRAAKI 197
>gi|239931287|ref|ZP_04688240.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
ghanaensis ATCC 14672]
Length = 201
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 91/171 (53%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I LYINSPGG +TAGMAIYD
Sbjct: 18 VYNRLLNERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDIYLYINSPGGSITAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 77 TMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+ ++ KRR+ E+ ++ G+T E++ + DRD A EA ++G++D V+
Sbjct: 137 AERLLHTKRRMAELTSQHTGQTVEQITRDSDRDRWFDAFEAKEYGLIDDVI 187
>gi|15827778|ref|NP_302041.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae TN]
gi|221230255|ref|YP_002503671.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
gi|13093330|emb|CAC30430.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae]
gi|219933362|emb|CAR71574.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
Length = 224
Score = 184 bits (468), Expect = 5e-45, Method: Composition-based stats.
Identities = 90/207 (43%), Positives = 129/207 (62%), Gaps = 10/207 (4%)
Query: 7 AKKDSEDVFLGLVPMV-----VEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLIC 60
A + E + P V + ++G D +Y RLL ERI+F+ ++ D++A +C
Sbjct: 14 AYRTPESRY----PTVGHVTDIRSNSQGFNLTDSVYERLLSERIIFLGSEVNDNIANRLC 69
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+L L AE+ K+ISLYINSPGG ++AGMAIYDTM I+T+ MG AASMG LL+
Sbjct: 70 AQILLLAAEDAFKDISLYINSPGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLA 129
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG +G R+ALP+ARIL+HQP GG +G A+DI A+ IK+ + + + G+ E +
Sbjct: 130 AGTRGKRYALPHARILMHQPLGGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERI 189
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMS 207
E DRD +ASEA ++G VD ++
Sbjct: 190 EADSDRDRWFTASEALEYGFVDHIITR 216
>gi|41408378|ref|NP_961214.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|118462339|ref|YP_880941.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
104]
gi|254774530|ref|ZP_05216046.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
subsp. avium ATCC 25291]
gi|67460506|sp|Q73XM9|CLPP1_MYCPA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|41396734|gb|AAS04597.1| ClpP2 [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163626|gb|ABK64523.1| Clp protease [Mycobacterium avium 104]
Length = 211
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 85/202 (42%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE+
Sbjct: 6 QPQARY--ILPSFIEHSSFGIKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESL 63
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G R A
Sbjct: 64 DPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMA 123
Query: 130 LPNARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPNAR+L+HQPS GQ SD+E A +I +++ + ++ GK + K DRD
Sbjct: 124 LPNARVLIHQPSLQGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAATIRKDTDRD 183
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA D+G++D VL R
Sbjct: 184 KILTAEEAKDYGIIDTVLEYRK 205
>gi|229821078|ref|YP_002882604.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
gi|229566991|gb|ACQ80842.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
Length = 223
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 87/195 (44%), Positives = 130/195 (66%), Gaps = 2/195 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G + D Y++L ++RI+F+ QI+D A + AQLL LE+++P I++
Sbjct: 23 VLPQFEERTAYGFKRQDPYTKLFEDRIIFLGVQIDDASADDVMAQLLVLESQDPDGLITM 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTMQ+I P I T C+GQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 83 YINSPGGSFTALTAIYDTMQYIAPQIQTVCLGQAASAAAVLLAAGTPGKRLALPNARVLI 142
Query: 138 HQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ QASDIE A ++++++ L + K+ +EV ++RD I++A+ A
Sbjct: 143 HQPALEGGTYAQASDIEIQANEVLRMREWLESTIAAHTSKSVDEVRADIERDKILTAAGA 202
Query: 196 CDWGVVDKVLMSRID 210
++G+VD+VL SR
Sbjct: 203 LEYGIVDQVLESRKK 217
>gi|237785950|ref|YP_002906655.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
kroppenstedtii DSM 44385]
gi|237758862|gb|ACR18112.1| ATP-dependent Clp protease proteolytic subunit 2 [Corynebacterium
kroppenstedtii DSM 44385]
Length = 228
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 83/210 (39%), Positives = 134/210 (63%), Gaps = 3/210 (1%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ E + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL
Sbjct: 21 SHMQMPESRY--ILPSFVEHSSFGAKESNPYNKLFEERIIFLGTQVDDASANDIMAQLLV 78
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
LE +P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G
Sbjct: 79 LEGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVVTVCLGQAASAAAVLLAAGTPG 138
Query: 126 MRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R ALPNAR+L+HQP+ GQ SD+E A +I +++ + ++ G + E++
Sbjct: 139 KRAALPNARVLIHQPATQGTQGQVSDLEIQAAEIERMRTLMETTLARHTGVSAEQIRIDT 198
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
DRD I++A A ++G++D+V R +K
Sbjct: 199 DRDKILTAEGAKEYGIIDQVFDYRKASAQK 228
>gi|159036302|ref|YP_001535555.1| endopeptidase Clp [Salinispora arenicola CNS-205]
gi|157915137|gb|ABV96564.1| Endopeptidase Clp [Salinispora arenicola CNS-205]
Length = 194
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 79/187 (42%), Positives = 123/187 (65%), Gaps = 1/187 (0%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
RG ++ RLLKERIVF+ ++ D A ICAQ+L L AE+P ++I LYINSPGG V
Sbjct: 9 PRGFGDQ-VFERLLKERIVFLGTEVTDESANRICAQILLLAAEDPDRDIMLYINSPGGSV 67
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
+AGMA+YDTM+F+ ++T +G A SMG LL AG G R+ALP++ IL+HQPSGG G
Sbjct: 68 SAGMAVYDTMRFVHNDVATLALGMAGSMGQFLLCAGAAGKRYALPHSWILMHQPSGGMGG 127
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+D+ A++++ +K+ + ++ G+T E+++ DRD + +A ++G++D V+
Sbjct: 128 TAADVRIQAENLLYVKKTTQGLIAQHSGRTLAEIQRDWDRDRWFTPEQAREYGLIDHVIA 187
Query: 207 SRIDIEE 213
++
Sbjct: 188 QAAELTS 194
>gi|306818243|ref|ZP_07451973.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris
ATCC 35239]
gi|304648982|gb|EFM46277.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus mulieris
ATCC 35239]
Length = 206
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLLKERI+++ Q+ + A ICAQ+L L AE+P +I LYINSPGG VTAGMAIYD
Sbjct: 26 IYKRLLKERIIWLGTQVAEENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG KG RFA P+ARIL+HQP GG G AS++ +
Sbjct: 86 TMQYIKPDVVTVTMGMAASMGQFLLTAGAKGKRFATPHARILMHQPLGGVQGTASEVRIN 145
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A I+ +K L +I + G T EE+ + DRDH +A EA ++G +D V+ + +++
Sbjct: 146 ADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVENAEAVKK 204
>gi|15827777|ref|NP_302040.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae TN]
gi|221230254|ref|YP_002503670.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
gi|14194506|sp|Q9CBY4|CLPP2_MYCLE RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|13093329|emb|CAC30429.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae]
gi|219933361|emb|CAR71573.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
leprae Br4923]
Length = 214
Score = 184 bits (468), Expect = 6e-45, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE+
Sbjct: 9 QPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESL 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G R A
Sbjct: 67 DPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMA 126
Query: 130 LPNARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPNAR+L+HQPS G GQ SD+E A +I +++ + ++ GK + K DRD
Sbjct: 127 LPNARVLIHQPSLAGVIQGQFSDLEIQAAEIERMRTLMETTLSRHTGKDAAVIRKDTDRD 186
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA D+G++D VL R
Sbjct: 187 KILTAEEAKDYGIIDTVLEYRK 208
>gi|227874919|ref|ZP_03993071.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243]
gi|227844496|gb|EEJ54653.1| endopeptidase Clp [Mobiluncus mulieris ATCC 35243]
Length = 206
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLLKERI+++ Q+ + A ICAQ+L L AE+P +I LYINSPGG VTAGMAIYD
Sbjct: 26 IYKRLLKERIIWLGTQVAEENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG KG RFA P+ARIL+HQP GG G AS++ +
Sbjct: 86 TMQYIKPDVVTVTMGMAASMGQFLLTAGAKGKRFATPHARILMHQPLGGVQGTASEVRIN 145
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A I+ +K L +I + G T EE+ + DRDH +A EA ++G +D V+ + +++
Sbjct: 146 ADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVENAEAVKK 204
>gi|297571129|ref|YP_003696903.1| endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595]
gi|296931476|gb|ADH92284.1| Endopeptidase Clp [Arcanobacterium haemolyticum DSM 20595]
Length = 226
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 90/212 (42%), Positives = 133/212 (62%), Gaps = 5/212 (2%)
Query: 5 GCAKKDSEDVFLG----LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
G + ++P E+T G + D Y++L ++RIVF+ Q++D A +
Sbjct: 9 GSMMPGGTAPMMPSNRYILPNFEERTPYGYKRQDPYAKLFEDRIVFLGVQVDDASADDVM 68
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLL LE+ +P+ I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+
Sbjct: 69 AQLLVLESIDPESPITMYINSPGGSFTALTAIYDTMQYIKPQIQTVCLGQAASAAAVLLA 128
Query: 121 AGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG G R ALPNAR+L+HQP+ GQASDI A +I ++ L + + G+ E
Sbjct: 129 AGAPGRRLALPNARVLIHQPAMEGVQGQASDIAIVADEIDRMNDWLIDTLAAHSGRDREL 188
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++K + RD I++A +A ++G+VD+VL SR +
Sbjct: 189 IKKDIARDKILTAQQAKEYGLVDQVLTSRKAV 220
>gi|307331320|ref|ZP_07610442.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
gi|306883061|gb|EFN14125.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
Length = 211
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 83/194 (42%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G + D YS+LL ERIVF+ I+D A + AQL+ LE P ++ISL
Sbjct: 9 VLPEFTERTSSGTHTMDPYSKLLSERIVFLGTPIDDTAANDVIAQLIHLEHAAPGQDISL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A A+YDT+ FI + T C+GQAAS ++LL+AG G R ALP ARIL+
Sbjct: 69 YINSPGGSFGAMTAVYDTLHFISCDVETICLGQAASAAAVLLAAGTPGKRLALPGARILI 128
Query: 138 HQ--PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQ + G SD+E A ++ + + L ++ V++ G++ E + +DRD I A A
Sbjct: 129 HQAGFAEPVEGTTSDLEIQANELRRTQETLEQMLVRHTGRSAERIRADIDRDKIFDAESA 188
Query: 196 CDWGVVDKVLMSRI 209
+G+VD+V SR
Sbjct: 189 VAYGLVDQVTQSRK 202
>gi|238062970|ref|ZP_04607679.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
gi|237884781|gb|EEP73609.1| endopeptidase Clp [Micromonospora sp. ATCC 39149]
Length = 216
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 116/174 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ +RLL +RI+ + +++D +A ICAQLL L +E+P+ +I LYINSPGG VTAGMAIYD
Sbjct: 40 VQNRLLGKRIIVLGSELDDSVANRICAQLLILSSEDPRADIQLYINSPGGSVTAGMAIYD 99
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ + ++T MG ASMG LL AG +G R+ALP+A I++HQPSGG +G ASD+
Sbjct: 100 TMQSVPNDVATVAMGMTASMGQFLLCAGARGKRYALPHASIMMHQPSGGIAGTASDVAIR 159
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
A ++ KR E + G+ E +E DRD +A EA D+G++D VL +
Sbjct: 160 AAQLLYTKRVCQERIAFHTGQPVERIEADSDRDRWFTAEEAKDYGLIDHVLHRK 213
>gi|15609597|ref|NP_216976.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Rv]
gi|15841984|ref|NP_337021.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis CDC1551]
gi|31793641|ref|NP_856134.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
AF2122/97]
gi|121638343|ref|YP_978567.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148662295|ref|YP_001283818.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Ra]
gi|148823660|ref|YP_001288414.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis F11]
gi|167969784|ref|ZP_02552061.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Ra]
gi|215404396|ref|ZP_03416577.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 02_1987]
gi|215412217|ref|ZP_03420979.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 94_M4241A]
gi|215427843|ref|ZP_03425762.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T92]
gi|215431406|ref|ZP_03429325.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis EAS054]
gi|215446706|ref|ZP_03433458.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T85]
gi|218754192|ref|ZP_03532988.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis GM 1503]
gi|219558457|ref|ZP_03537533.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T17]
gi|224990837|ref|YP_002645524.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253798461|ref|YP_003031462.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis KZN 1435]
gi|254232594|ref|ZP_04925921.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis C]
gi|254365236|ref|ZP_04981282.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis str.
Haarlem]
gi|254551508|ref|ZP_05141955.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260187467|ref|ZP_05764941.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis CPHL_A]
gi|260201585|ref|ZP_05769076.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T46]
gi|260205764|ref|ZP_05773255.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis K85]
gi|289443986|ref|ZP_06433730.1| clp protease [Mycobacterium tuberculosis T46]
gi|289448103|ref|ZP_06437847.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis CPHL_A]
gi|289553749|ref|ZP_06442959.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis KZN 605]
gi|289570615|ref|ZP_06450842.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis T17]
gi|289575154|ref|ZP_06455381.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis K85]
gi|289746242|ref|ZP_06505620.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
tuberculosis 02_1987]
gi|289751066|ref|ZP_06510444.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis T92]
gi|289754568|ref|ZP_06513946.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
tuberculosis EAS054]
gi|289758592|ref|ZP_06517970.1| endopeptidase Clp 2 [Mycobacterium tuberculosis T85]
gi|289762629|ref|ZP_06522007.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis GM
1503]
gi|294994432|ref|ZP_06800123.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 210]
gi|297635066|ref|ZP_06952846.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN 4207]
gi|297732057|ref|ZP_06961175.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN R506]
gi|298525938|ref|ZP_07013347.1| ATP-dependent Clp protease proteolytic subunit 2 [Mycobacterium
tuberculosis 94_M4241A]
gi|306776730|ref|ZP_07415067.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu001]
gi|306780503|ref|ZP_07418840.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu002]
gi|306785255|ref|ZP_07423577.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu003]
gi|306789614|ref|ZP_07427936.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu004]
gi|306793941|ref|ZP_07432243.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu005]
gi|306798335|ref|ZP_07436637.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu006]
gi|306804211|ref|ZP_07440879.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu008]
gi|306808781|ref|ZP_07445449.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu007]
gi|306968613|ref|ZP_07481274.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu009]
gi|306972840|ref|ZP_07485501.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu010]
gi|307080546|ref|ZP_07489716.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu011]
gi|307085144|ref|ZP_07494257.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu012]
gi|313659393|ref|ZP_07816273.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN V2475]
gi|54036853|sp|P63784|CLPP2_MYCBO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|54040891|sp|P63783|CLPP2_MYCTU RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2791500|emb|CAA16037.1| PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 2 CLPP2
(ENDOPEPTIDASE CLP 2) [Mycobacterium tuberculosis H37Rv]
gi|13882258|gb|AAK46835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mycobacterium
tuberculosis CDC1551]
gi|31619234|emb|CAD97348.1| PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 2 CLPP2
(ENDOPEPTIDASE CLP 2) [Mycobacterium bovis AF2122/97]
gi|121493991|emb|CAL72468.1| Probable ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601653|gb|EAY60663.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis C]
gi|134150750|gb|EBA42795.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis str.
Haarlem]
gi|148506447|gb|ABQ74256.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
tuberculosis H37Ra]
gi|148722187|gb|ABR06812.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis F11]
gi|224773950|dbj|BAH26756.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319964|gb|ACT24567.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis KZN 1435]
gi|289416905|gb|EFD14145.1| clp protease [Mycobacterium tuberculosis T46]
gi|289421061|gb|EFD18262.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis CPHL_A]
gi|289438381|gb|EFD20874.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis KZN 605]
gi|289539585|gb|EFD44163.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis K85]
gi|289544369|gb|EFD48017.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis T17]
gi|289686770|gb|EFD54258.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
tuberculosis 02_1987]
gi|289691653|gb|EFD59082.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis T92]
gi|289695155|gb|EFD62584.1| ATP-dependent Clp protease proteolytic subunit ClpP2 [Mycobacterium
tuberculosis EAS054]
gi|289710135|gb|EFD74151.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
(endopeptidase clp 2) [Mycobacterium tuberculosis GM
1503]
gi|289714156|gb|EFD78168.1| endopeptidase Clp 2 [Mycobacterium tuberculosis T85]
gi|298495732|gb|EFI31026.1| ATP-dependent Clp protease proteolytic subunit 2 [Mycobacterium
tuberculosis 94_M4241A]
gi|308214890|gb|EFO74289.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu001]
gi|308326651|gb|EFP15502.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu002]
gi|308330077|gb|EFP18928.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu003]
gi|308333917|gb|EFP22768.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu004]
gi|308337720|gb|EFP26571.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu005]
gi|308341401|gb|EFP30252.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu006]
gi|308344887|gb|EFP33738.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu007]
gi|308349198|gb|EFP38049.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu008]
gi|308353819|gb|EFP42670.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu009]
gi|308357768|gb|EFP46619.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu010]
gi|308361713|gb|EFP50564.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu011]
gi|308365323|gb|EFP54174.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis SUMu012]
gi|323718966|gb|EGB28116.1| ATP-dependent Clp protease proteolytic subunit 2 ClpP2
[Mycobacterium tuberculosis CDC1551A]
gi|326904074|gb|EGE51007.1| ATP-dependent Clp protease proteolytic subunit 2 ClpP2
[Mycobacterium tuberculosis W-148]
gi|328458229|gb|AEB03652.1| ATP-dependent clp protease proteolytic subunit 2 clpP2
[Mycobacterium tuberculosis KZN 4207]
Length = 214
Score = 184 bits (467), Expect = 7e-45, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE+
Sbjct: 9 QPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQLLVLESL 66
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG G R A
Sbjct: 67 DPDRDITMYINSPGGGFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGTPGKRMA 126
Query: 130 LPNARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
LPNAR+L+HQP SG GQ SD+E A +I +++ + ++ GK + K DRD
Sbjct: 127 LPNARVLIHQPSLSGVIQGQFSDLEIQAAEIERMRTLMETTLARHTGKDAGVIRKDTDRD 186
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A EA D+G++D VL R
Sbjct: 187 KILTAEEAKDYGIIDTVLEYRK 208
>gi|269795731|ref|YP_003315186.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
gi|269097916|gb|ACZ22352.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
Length = 207
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 90/171 (52%), Positives = 127/171 (74%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A ICAQ++ L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 22 IYNRLLKERIIWLGSEVRDDNANAICAQMMLLAAEDPEKDIFLYINSPGGSITAGMAIYD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI+P ++T MG AASMG LLS+G KG R+A P+AR+++HQPSGG G A+D+ +
Sbjct: 82 TMQFIQPDVATVAMGMAASMGQFLLSSGTKGKRYATPHARVMMHQPSGGIGGTATDVRIN 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+ I+ +KR L E+ + GK+ E++ DRD +A EA ++G +DKV+
Sbjct: 142 AELILHMKRVLAELIAEQTGKSTEQIHTDSDRDRWFTAPEALEYGFIDKVV 192
>gi|119717698|ref|YP_924663.1| ClpP2 peptidase. Serine peptidase. MEROPS family S14 [Nocardioides
sp. JS614]
gi|119538359|gb|ABL82976.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
Length = 206
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 87/197 (44%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+P E+T+ G R D Y++L ++RI+++ I D +A + AQLL L++ NP
Sbjct: 1 MSEMNYYIPQWEERTSYGFRRIDPYAKLFEDRIIYLGTPISDDVANAVIAQLLCLQSMNP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++IS+YINSPGG TA AIYDTM+FIKP + T C+GQAAS ++LL+AG G R ALP
Sbjct: 61 DQDISIYINSPGGSFTALTAIYDTMKFIKPDVQTVCIGQAASAAAILLAAGTPGKRLALP 120
Query: 132 NARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
N+RIL+HQP GQ SDIE A +I++++ L ++ + G++ EEV ++RD I+
Sbjct: 121 NSRILIHQPYTEGTFGQTSDIEIQANEILRMRELLEKMISDHSGRSIEEVSHDIERDKIL 180
Query: 191 SASEACDWGVVDKVLMS 207
+A A ++G++D VL S
Sbjct: 181 TAEGAVEYGLIDAVLES 197
>gi|295838901|ref|ZP_06825834.1| Clp protease [Streptomyces sp. SPB74]
gi|302519065|ref|ZP_07271407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
gi|197695453|gb|EDY42386.1| Clp protease [Streptomyces sp. SPB74]
gi|302427960|gb|EFK99775.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
Length = 223
Score = 184 bits (467), Expect = 8e-45, Method: Composition-based stats.
Identities = 90/193 (46%), Positives = 136/193 (70%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP VE+T++G R YD Y++L +ER++F+ QI+D A + AQLL LE+ +P ++IS+
Sbjct: 25 IVPRFVERTSQGVREYDPYAKLFEERVIFLGVQIDDASANDVMAQLLCLESMDPDRDISI 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQF+KP I T CMGQAAS ++LL+AG G R ALPNAR+L+
Sbjct: 85 YINSPGGSMTALTAIYDTMQFVKPDIQTVCMGQAASAAAVLLAAGAPGKRMALPNARVLI 144
Query: 138 HQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQPS Q SD+E A++I++++ +L ++ K+ E++ ++RD I++A +A
Sbjct: 145 HQPSSQTGREQLSDLEIAAKEIMRMRTQLEDMLAKHSTTPIEKIRDDIERDKILTAEDAL 204
Query: 197 DWGVVDKVLMSRI 209
+G+VD++ R
Sbjct: 205 AYGLVDQITTPRK 217
>gi|315443632|ref|YP_004076511.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
gi|315261935|gb|ADT98676.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
Length = 198
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 119/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I LYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLAERIIFLGSQVDDDIANRLCAQILLLSAEDPTKDIHLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM ++T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDVATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGITGGAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+T E +E DRD +A EA ++G VD ++ S
Sbjct: 137 AEQFASIKKEMFRLNAEFTGQTIERIEADSDRDRWFTAQEALEYGFVDHIITS 189
>gi|298243372|ref|ZP_06967179.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
gi|297556426|gb|EFH90290.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
Length = 215
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 92/186 (49%), Positives = 130/186 (69%), Gaps = 2/186 (1%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E E SY I LLK+RI+ + I+D +A LL+LE E+ ++ISLY+NSPG
Sbjct: 30 EYRGGREGSYGIEDLLLKDRIILIGKPIDDMVAYQTIMLLLYLEHEDSSQDISLYLNSPG 89
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP--S 141
G VTAG+AIYDTMQ+IKP +ST C+G A SM S+LL+ G KG RF+LPN+ IL+HQP S
Sbjct: 90 GSVTAGLAIYDTMQYIKPDVSTVCVGMAMSMASVLLAGGAKGKRFSLPNSTILIHQPLIS 149
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G +GQASDIE A++I++ + LNE+ K+ G+ E + + DRD+ M+A +A ++G++
Sbjct: 150 GEIAGQASDIEIEAREIIRTRSELNELLAKHTGQPVERIAQDSDRDNYMTAHQAVEYGLI 209
Query: 202 DKVLMS 207
D+VL S
Sbjct: 210 DEVLES 215
>gi|313836728|gb|EFS74442.1| Clp protease [Propionibacterium acnes HL037PA2]
gi|314929866|gb|EFS93697.1| Clp protease [Propionibacterium acnes HL044PA1]
gi|314972293|gb|EFT16390.1| Clp protease [Propionibacterium acnes HL037PA3]
gi|328907723|gb|EGG27487.1| ATP-dependent Clp protease proteolytic subunit 2 [Propionibacterium
sp. P08]
Length = 244
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 52 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 111
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P + T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 112 YINSPGGSFTAMTAIYDTMNYVRPNVQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 171
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 172 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 231
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 232 KEYGLIDDILTS 243
>gi|328882450|emb|CCA55689.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
venezuelae ATCC 10712]
Length = 205
Score = 184 bits (466), Expect = 9e-45, Method: Composition-based stats.
Identities = 89/194 (45%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 15 FLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
L P + + G D +Y+RLL ERI+F+ Q++D +A I AQ+L L A +P K
Sbjct: 1 MTNLKPYAAGEPSIGGGLGDHVYNRLLGERIIFLGQQVDDEIANKITAQMLLLAA-DPDK 59
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I LYINSPGG VTAGMA+YDTMQ+I + T MG AASMG LL+ G G RFALPN
Sbjct: 60 DIYLYINSPGGSVTAGMAVYDTMQYIPNDVVTIGMGMAASMGQFLLTGGTPGKRFALPNT 119
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
IL+HQ S G G ASDI+ A+ +++ K+R+ EI + G+T E + + DRD +A
Sbjct: 120 DILMHQGSAGIGGTASDIKIQAEYLLRTKQRMAEITAHHSGQTVEAIIRDGDRDRWFTAD 179
Query: 194 EACDWGVVDKVLMS 207
EA ++G++D ++
Sbjct: 180 EAKEYGLIDDIITH 193
>gi|108796955|ref|YP_636255.1| ATP-dependent Clp protease proteolytic subunit [Pseudendoclonium
akinetum]
gi|122217843|sp|Q3ZJ12|CLPP_PSEAK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56159653|gb|AAV80677.1| proteolytic subunit 2 of clp protease [Pseudendoclonium akinetum]
Length = 198
Score = 184 bits (466), Expect = 1e-44, Method: Composition-based stats.
Identities = 78/195 (40%), Positives = 128/195 (65%), Gaps = 3/195 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ ++D +A + +L+L AE+
Sbjct: 1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I +YINSPGG VT G+ ++D M +IK ++T C+G AASM S +L+ G KG R ALP+
Sbjct: 61 KGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQAS + ++++++I+ + +IY + G+T E + + ++RD MSA
Sbjct: 121 SRIMIHQPEGGSQGQASVVLSESEEVLRIRDEVAQIYSERTGQTLERISRDMNRDQFMSA 180
Query: 193 SEACDWGVVDKVLMS 207
EA D+G+VD++ S
Sbjct: 181 REAKDYGLVDQIASS 195
>gi|145223176|ref|YP_001133854.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
gilvum PYR-GCK]
gi|315443633|ref|YP_004076512.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
gi|145215662|gb|ABP45066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
gilvum PYR-GCK]
gi|315261936|gb|ADT98677.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mycobacterium
sp. Spyr1]
Length = 215
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 85/208 (40%), Positives = 134/208 (64%), Gaps = 4/208 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
+ + + ++P +E ++ G + + Y++L +ERI+F+ Q++D A I AQL
Sbjct: 4 HTDPRLQPQARY--ILPSFIEHSSFGVKESNPYNKLFEERIIFLGVQVDDASANDIMAQL 61
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+ +P ++I++YINSPGG T+ MAIYDTMQ+++ I T C+GQAAS ++LL+AG
Sbjct: 62 LVLESLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRADIQTVCLGQAASAAAVLLAAGT 121
Query: 124 KGMRFALPNARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G R ALPNAR+L+HQP+ G GQ SD+E A +I +++ + E + GK + +
Sbjct: 122 PGKRMALPNARVLIHQPALGGVIQGQFSDLEIQAAEIERMRTLMEETLSLHTGKPADVIR 181
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRI 209
K DRD I++A+ A D+G++D VL R
Sbjct: 182 KDTDRDKILTAAAAKDYGIIDTVLEYRK 209
>gi|148272644|ref|YP_001222205.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
gi|147830574|emb|CAN01509.1| ATP-dependent protease, proteolytic subunit [Clavibacter
michiganensis subsp. michiganensis NCPPB 382]
Length = 195
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 124/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLLK+RI+++ ++ D A ICA++L L AE+ +K+I LYINSPGG +TAGMAIYD
Sbjct: 10 VFDRLLKDRIIWLGSEVRDDNANEICAKILLLAAEDSEKDIFLYINSPGGSITAGMAIYD 69
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+ I T +G AASMG LLL++G KG R+ PNAR+LLHQP GGF G +SDI+
Sbjct: 70 TMQFVPNDIVTVGIGMAASMGQLLLTSGTKGKRYITPNARVLLHQPHGGFGGTSSDIQTQ 129
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
AQ I+ +K+RL EI GKT E++ + DRD +A EA ++G VD + S D+
Sbjct: 130 AQLILSMKQRLAEITAGQTGKTAEQINEDGDRDRWFTAQEALEYGFVDHIRESATDV 186
>gi|296394283|ref|YP_003659167.1| endopeptidase Clp [Segniliparus rotundus DSM 44985]
gi|296181430|gb|ADG98336.1| Endopeptidase Clp [Segniliparus rotundus DSM 44985]
Length = 200
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 84/177 (47%), Positives = 124/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERI+F+ +++D +A +CAQ+L L AE+P K+ISLYINSPGG ++AGMAIYD
Sbjct: 21 VFERLLRERIIFLGSEVDDDIANRLCAQVLLLTAEDPSKDISLYINSPGGSISAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ + I+T+ MG AASMG LL+AG KG R+ALP+ARI++HQPS G G A+DI
Sbjct: 81 TMQLSECDIATYAMGMAASMGQFLLAAGAKGKRYALPHARIMMHQPSAGIYGAAADIAIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ + K+ + + + G+T E++ + +RD +A+EA ++G VD V+ I
Sbjct: 141 AEQLAATKKEMTRLNAEFTGQTVEKIHEDSERDRWFTAAEAKEYGFVDHVITRAAKI 197
>gi|217071428|gb|ACJ84074.1| unknown [Medicago truncatula]
Length = 297
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 79/201 (39%), Positives = 127/201 (63%), Gaps = 8/201 (3%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ S +P E D + LL++RIVF+ Q++D A + +QLLF
Sbjct: 59 VSHDLSAKTASPWLPKFEE--------LDTTNMLLRQRIVFLGSQVDDMTADFVISQLLF 110
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A++P K+I L+INSPGG VTAGM +YD M+ K +ST C+G AASMG+ LL+AG KG
Sbjct: 111 LDADDPTKDIKLFINSPGGSVTAGMGVYDAMKLCKADVSTVCLGLAASMGAFLLAAGTKG 170
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R+ +PN+R+++HQP G G+A+++ A++++ K ++N+I + GK E++E D
Sbjct: 171 KRYCMPNSRVMIHQPLGSAGGKATEMSIRARELMYHKIKINKILSRITGKPEEQIELDTD 230
Query: 186 RDHIMSASEACDWGVVDKVLM 206
RD+ M+ E ++G++D V+
Sbjct: 231 RDNFMNPWEGKEYGLIDDVID 251
>gi|312885607|ref|ZP_07745243.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603]
gi|311301919|gb|EFQ78952.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603]
Length = 232
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 88/189 (46%), Positives = 129/189 (68%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I D A +I AQLLFL++ + +++I
Sbjct: 38 SMTPYIIEERQLNVAQMDVFSRLMMDRIIFLGDAIYDTNANIIQAQLLFLQSADAKRDIQ 97
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V AG+ IYDTMQFI ++T C G AASMG++LL AG G R ALP++R++
Sbjct: 98 IYINSPGGSVYAGLGIYDTMQFISNDVATICTGMAASMGAVLLCAGTAGKRAALPHSRVM 157
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG GQ SDIE +I K+K+ L +I + G +YE+V DRD+ M A EA
Sbjct: 158 IHQPSGGAQGQQSDIEITYHEITKLKKELYQIIADHSGASYEKVWDASDRDYWMIAEEAK 217
Query: 197 DWGVVDKVL 205
++G+VD++L
Sbjct: 218 EFGMVDEIL 226
>gi|269219685|ref|ZP_06163539.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210927|gb|EEZ77267.1| Clp protease [Actinomyces sp. oral taxon 848 str. F0332]
Length = 197
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 96/182 (52%), Positives = 131/182 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+++ ++ + A +ICAQ+L L AE+P+++I LYINSPGG VTAGMAIYD
Sbjct: 15 VYTRLLKERIIWLGEEVREDNANIICAQMLLLAAEDPERDIYLYINSPGGSVTAGMAIYD 74
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI+P + T MG AASMG LLSAG KG R+ P+AR+LLHQP GG G A+DI +
Sbjct: 75 TMQFIQPDVVTVGMGMAASMGQFLLSAGAKGKRYITPHARVLLHQPLGGAGGTATDIRIN 134
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A I+++KR L EI + GKT E+V + DRDH +A EA ++G VD+++ S I
Sbjct: 135 ADLILQMKRELAEITAEATGKTPEQVIEDGDRDHWFNAQEALEYGFVDRIVSSANAIGGS 194
Query: 215 SK 216
++
Sbjct: 195 NE 196
>gi|170781893|ref|YP_001710225.1| ATP-dependent Clp protease proteolytic subunit [Clavibacter
michiganensis subsp. sepedonicus]
gi|169156461|emb|CAQ01609.1| ATP dependent Clp protease proteolytic subunit 1 [Clavibacter
michiganensis subsp. sepedonicus]
Length = 200
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/177 (51%), Positives = 124/177 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLLK+RI+++ ++ D A ICA++L L AE+ +K+I LYINSPGG +TAGMAIYD
Sbjct: 15 VFDRLLKDRIIWLGSEVRDDNANEICAKILLLAAEDSEKDIFLYINSPGGSITAGMAIYD 74
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+ I T +G AASMG LLL++G KG R+ PNAR+LLHQP GGF G +SDI+
Sbjct: 75 TMQFVPNDIVTVGIGMAASMGQLLLTSGTKGKRYITPNARVLLHQPHGGFGGTSSDIQTQ 134
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
AQ I+ +K+RL EI GKT E++ + DRD +A EA ++G VD + S D+
Sbjct: 135 AQLILSMKQRLAEITAGQTGKTAEQINEDGDRDRWFTAQEALEYGFVDHIRESATDV 191
>gi|269976479|ref|ZP_06183464.1| Clp protease [Mobiluncus mulieris 28-1]
gi|307701829|ref|ZP_07638843.1| endopeptidase Clp [Mobiluncus mulieris FB024-16]
gi|269935280|gb|EEZ91829.1| Clp protease [Mobiluncus mulieris 28-1]
gi|307613087|gb|EFN92342.1| endopeptidase Clp [Mobiluncus mulieris FB024-16]
Length = 197
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 93/179 (51%), Positives = 124/179 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLLKERI+++ Q+ + A ICAQ+L L AE+P +I LYINSPGG VTAGMAIYD
Sbjct: 17 IYKRLLKERIIWLGTQVAEENANAICAQMLLLAAEDPDSDIYLYINSPGGSVTAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IKP + T MG AASMG LL+AG KG RFA P+ARIL+HQP GG G AS++ +
Sbjct: 77 TMQYIKPDVVTVTMGMAASMGQFLLTAGAKGKRFATPHARILMHQPLGGVQGTASEVRIN 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A I+ +K L +I + G T EE+ + DRDH +A EA ++G +D V+ + +++
Sbjct: 137 ADLILAMKNELAQITAERTGHTLEEITRDADRDHWYTAQEALEYGFIDAVVENAEAVKK 195
>gi|119963474|ref|YP_948116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrobacter
aurescens TC1]
gi|119950333|gb|ABM09244.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrobacter
aurescens TC1]
Length = 212
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 92/170 (54%), Positives = 122/170 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A IC+QLL L AE+P+K+I LYINSPGG VTAGMAIYD
Sbjct: 22 IYNRLLKERIIWLGSEVRDENANAICSQLLLLSAEDPEKDIYLYINSPGGSVTAGMAIYD 81
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI + T G AASMG LLS+G KG R+A PNARIL+HQPSGG G ASDI+
Sbjct: 82 TMQFIPNDVVTVATGLAASMGQFLLSSGTKGKRYATPNARILMHQPSGGIGGTASDIKIQ 141
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K+ + E+ + G++ E + K DRD +A+EA ++G DK+
Sbjct: 142 AELILHMKKVMAELTAEQTGQSVETILKDNDRDKWFTATEALEYGFFDKI 191
>gi|159465135|ref|XP_001690778.1| active subunit of chloroplast ClpP peptidase [Chlamydomonas
reinhardtii]
gi|158279464|gb|EDP05224.1| active subunit of chloroplast ClpP peptidase [Chlamydomonas
reinhardtii]
Length = 345
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 85/186 (45%), Positives = 126/186 (67%), Gaps = 2/186 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+V +T E D + LL++RIVF+ G++ED A I +QLL L++++P K+I ++I
Sbjct: 53 PIVAPRTA--EMQGDPFGLLLRQRIVFLGGEVEDFGADAIISQLLLLDSQDPTKDIKIFI 110
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGM IYD M + ++T+C G AASMG+ LL AG++G R ++PN+RI++HQ
Sbjct: 111 NSPGGSVTAGMGIYDAMMLCRADVNTYCFGLAASMGAFLLGAGKRGKRNSMPNSRIMIHQ 170
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG SGQA DIE A++I+ K LN I C + ++E+ DRD MS EA ++G
Sbjct: 171 PLGGASGQAVDIEIQAKEIMYHKANLNRIMADYCQQPLSKIEEDTDRDRYMSPLEAKEYG 230
Query: 200 VVDKVL 205
++D ++
Sbjct: 231 LIDHII 236
>gi|213966164|ref|ZP_03394350.1| Clp protease [Corynebacterium amycolatum SK46]
gi|213951179|gb|EEB62575.1| Clp protease [Corynebacterium amycolatum SK46]
Length = 209
Score = 183 bits (465), Expect = 1e-44, Method: Composition-based stats.
Identities = 85/203 (41%), Positives = 137/203 (67%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 6 MQMPQSRY--VLPSFVEHSSFGAKESNPYNKLFEERIIFLGSQVDDTAANDIMAQLLVLE 63
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 64 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKR 123
Query: 128 FALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
ALPNAR+L+HQP+ GQ SD+E A +I ++++ + E ++ G+T E++ K DR
Sbjct: 124 AALPNARVLIHQPATQGIQGQVSDLEIQANEIERMRKLMEETLARHSGRTAEQIRKDTDR 183
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I++A EA ++G++D+V R
Sbjct: 184 DKILTAEEAVEYGIIDQVFEYRK 206
>gi|256787753|ref|ZP_05526184.1| ATP dependent Clp protease proteolytic subunit 1 [Streptomyces
lividans TK24]
Length = 201
Score = 183 bits (464), Expect = 1e-44, Method: Composition-based stats.
Identities = 91/171 (53%), Positives = 123/171 (71%), Gaps = 1/171 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I LYINSPGG +TAGMAIYD
Sbjct: 18 VYNRLLGERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDIFLYINSPGGSITAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 77 TMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+ ++ KRR+ E+ ++ G+T E++ + DRD A EA ++G++D V+
Sbjct: 137 AERLLHTKRRMAELTSQHTGQTIEQITRDSDRDRWFDAFEAKEYGLIDDVI 187
>gi|254774529|ref|ZP_05216045.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
subsp. avium ATCC 25291]
Length = 196
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 118/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+P K+ISLYINSPGG ++AGMAIYD
Sbjct: 14 VYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLYINSPGGSISAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 74 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G++ E +E DRD +A EA ++G VD ++
Sbjct: 134 AEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITR 186
>gi|282880880|ref|ZP_06289573.1| Clp protease [Prevotella timonensis CRIS 5C-B1]
gi|281305262|gb|EFA97329.1| Clp protease [Prevotella timonensis CRIS 5C-B1]
Length = 221
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 87/200 (43%), Positives = 136/200 (68%), Gaps = 2/200 (1%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S+ +L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++
Sbjct: 24 KSQARYLN--PYILEERQLNVTQMDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSV 81
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K+IS+YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R A
Sbjct: 82 DGGKDISIYINSPGGSVTAGLGIYDTMQFITSDVATICTGMAASMAAVLLVAGQEGKRSA 141
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
L ++R+++HQP GG GQASDIE A++I+K K+ L I + YE+V + DR++
Sbjct: 142 LTHSRVMIHQPLGGVQGQASDIEIEAKEIIKFKKELFTIIANHSHTPYEKVYRDSDRNYW 201
Query: 190 MSASEACDWGVVDKVLMSRI 209
M A +A ++G++D VL+ +
Sbjct: 202 MDAEQAKEYGMIDTVLVRKK 221
>gi|116785923|gb|ABK23909.1| unknown [Picea sitchensis]
gi|148907936|gb|ABR17088.1| unknown [Picea sitchensis]
Length = 293
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 75/210 (35%), Positives = 127/210 (60%), Gaps = 4/210 (1%)
Query: 11 SEDVFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
S+ + + P V +T + DI++ L +ERI+++ I++ + I A +L+L+
Sbjct: 76 SQVTMMPIGTPRVPYRTPGEGSWQWVDIWNALYRERIIYIAQYIDEEFSNQILATMLYLD 135
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + K+I+LYIN PGG VT M++YDTMQ +K PI T C+G A ++ LL+AG KG R
Sbjct: 136 SVDSSKDITLYINGPGGDVTPCMSMYDTMQSLKSPIGTLCLGYAFNLAGFLLAAGAKGKR 195
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
A P++R++L +G GQA DIE A+++++ + + E +N G+ E++ K L R
Sbjct: 196 GASPSSRVVLQSVAGSARGQADDIENEAKELIRTRNYMFEQLARNTGQPLEKITKDLRRV 255
Query: 188 HIMSASEACDWGVVDKVLM-SRIDIEEKSK 216
+A EA ++G++D++L RI + SK
Sbjct: 256 MYFNAQEALEYGIIDRILRPPRIKPDASSK 285
>gi|224013265|ref|XP_002295284.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969007|gb|EED87350.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 198
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 90/191 (47%), Positives = 135/191 (70%), Gaps = 4/191 (2%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P+V + T+ D+ SRLL++RI+ + ++D +A ++ AQLL+L E+P K+I+LY
Sbjct: 1 MPVVDDGTS----QKDVLSRLLQDRIILLGQGVDDEIANVLVAQLLYLANEDPTKDITLY 56
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V+AGMAIYDTMQ++ +ST C G AASMG+ LL AG G R ALPNARI++H
Sbjct: 57 INSPGGSVSAGMAIYDTMQYVPCDVSTVCFGMAASMGAFLLGAGAPGKRRALPNARIMIH 116
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP GG GQA+DIE A++I+ I+ LN + C + +++E DRD M+A EA D+
Sbjct: 117 QPLGGAQGQAADIEIQAKEILFIREVLNTYIAEYCDQPKDKIEADCDRDFFMTAEEAVDY 176
Query: 199 GVVDKVLMSRI 209
G++D++++++
Sbjct: 177 GIIDEMIVTKT 187
>gi|313816691|gb|EFS54405.1| Clp protease [Propionibacterium acnes HL059PA1]
Length = 244
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + +IS+
Sbjct: 52 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADHQISM 111
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 112 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 171
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 172 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 231
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 232 KEYGLIDDILTS 243
>gi|297199671|ref|ZP_06917068.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
gi|197713959|gb|EDY57993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
Length = 219
Score = 183 bits (464), Expect = 2e-44, Method: Composition-based stats.
Identities = 91/171 (53%), Positives = 124/171 (72%), Gaps = 1/171 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L A +P+K+I LYINSPGG +TAGMAIYD
Sbjct: 36 VYNRLLGERIIFLGQAVDDDIANKITAQLLLLAA-DPEKDIYLYINSPGGSITAGMAIYD 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 95 TMQYIKNDVVTIAMGLAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 154
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+ ++ K+R+ E+ ++ G+T E++ + DRD A EA ++G++D V+
Sbjct: 155 AERLLHTKKRMAELTSQHTGQTIEQITRDSDRDRWFDAHEAKEYGLIDDVI 205
>gi|50843046|ref|YP_056273.1| ATP-dependent Clp protease proteolytic subunit 2 [Propionibacterium
acnes KPA171202]
gi|50840648|gb|AAT83315.1| ATP-dependent Clp protease proteolytic subunit 2 [Propionibacterium
acnes KPA171202]
Length = 253
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 61 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 120
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 121 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 180
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 181 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 240
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 241 KEYGLIDDILTS 252
>gi|320161285|ref|YP_004174509.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
gi|319995138|dbj|BAJ63909.1| ATP-dependent Clp protease proteolytic subunit [Anaerolinea
thermophila UNI-1]
Length = 218
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 122/173 (70%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ + LL+ RI+++ I+D +A I AQLLFL E+ + I +YINSPGG V AG+AIY
Sbjct: 36 DLNALLLRNRIIYLGTAIDDKVANNIVAQLLFLSNEDREAPIQMYINSPGGQVYAGLAIY 95
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ I PIST +G AS G++LL+AG KGMR+ALPNA I +HQP GG GQA++IE
Sbjct: 96 DAMQIIPNPISTLAVGVTASFGTVLLAAGTKGMRYALPNATIHMHQPLGGAQGQATEIEI 155
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++I+++K RLN+I + G+T E +++ +RD M A +A ++G+VD ++
Sbjct: 156 QAKEILRLKARLNQILAAHTGQTVETIQRDTERDRYMDAHQAMEYGLVDHIME 208
>gi|294790932|ref|ZP_06756090.1| Clp protease [Scardovia inopinata F0304]
gi|294458829|gb|EFG27182.1| Clp protease [Scardovia inopinata F0304]
Length = 216
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 83/200 (41%), Positives = 136/200 (68%), Gaps = 3/200 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + ++P E+T+ G + D Y++L ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 19 PQARY--VMPQFEEKTSFGYKRSDPYTKLFEDRIIFMGVQVDDASADDIMAQLLVLESQD 76
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ LYINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 77 PDRDVVLYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGTKGKRLML 136
Query: 131 PNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PNAR+L+HQP+ G+A++IE A+++++++ L K+ G+ E + K ++ D I
Sbjct: 137 PNARVLIHQPAMGQDFGKATEIEIQAKELLRMREWLENTLAKHTGQDVERIRKDIETDTI 196
Query: 190 MSASEACDWGVVDKVLMSRI 209
++A +A ++G+VD +L R
Sbjct: 197 LTAEQAKEYGMVDAILEHRK 216
>gi|323149170|ref|YP_004221999.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa sp.
C-169]
gi|317467226|gb|ADV29847.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa sp.
C-169]
Length = 195
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ +++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPTAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K + +YINSPGG VT G+A+YD+M ++K ++T C+G AASM S +L+ G++G R ALP
Sbjct: 60 SKGLYIYINSPGGSVTCGIAVYDSMNYVKADVTTICVGTAASMASFVLAGGDRGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ + ++++I+R++ +IY + G+ + + +DRD MS
Sbjct: 120 HSRIMIHQPEGGSQGQASEVLSESSEVMRIRRQVGKIYAERTGQPLSRISRDMDRDQFMS 179
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD+V
Sbjct: 180 AREAKEYGLVDQV 192
>gi|325000576|ref|ZP_08121688.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia sp.
P1]
Length = 227
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 118/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL++RI+ + Q++ ++ I AQ+L L AE+P+K+I LYINSPGG VT GMA++D
Sbjct: 43 VYERLLQQRIIVLGQQVDAEISNRIAAQMLLLAAEDPEKDIELYINSPGGSVTDGMAVFD 102
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I +ST MG AASMG LLSAG G RFALP+ARI++HQPSGG G +DI
Sbjct: 103 TMNLIPCDVSTTAMGMAASMGQFLLSAGTPGKRFALPHARIMMHQPSGGIGGTEADITIL 162
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ + K KR + E+ ++ G++ E +E+ DRD +A EA D+G VD V+
Sbjct: 163 AEQMRKTKREMAELIAQHTGQSLETIERDSDRDRWFTAEEAKDYGFVDHVVTH 215
>gi|163841993|ref|YP_001626398.1| ATP-dependent endopeptidase Clp proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162955469|gb|ABY24984.1| ClpP [Renibacterium salmoninarum ATCC 33209]
Length = 259
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 93/185 (50%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P + + G+ Y +Y+RLLK+R +++ ++ D A LIC+QLL L +E+ KEI LYI
Sbjct: 60 PQMATVSPGGQDDY-VYNRLLKQRTIWLGSEVRDDNANLICSQLLLLASEDQDKEIYLYI 118
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG VTAGMAIYDTMQFI + T G AASMG LLS+G KG R+A PNARIL+HQ
Sbjct: 119 NSPGGSVTAGMAIYDTMQFIPNDVVTVATGLAASMGQFLLSSGAKGKRYATPNARILMHQ 178
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
PSGG G ASDI+ A+ I+ +K+ + E+ + G+T E++ K DRD +A EA +G
Sbjct: 179 PSGGIGGTASDIKIQAELILHMKKVMAELTAEQTGQTVEQILKDNDRDKWFTAEEALAYG 238
Query: 200 VVDKV 204
DK+
Sbjct: 239 FFDKI 243
>gi|282878163|ref|ZP_06286960.1| Clp protease [Prevotella buccalis ATCC 35310]
gi|281299741|gb|EFA92113.1| Clp protease [Prevotella buccalis ATCC 35310]
Length = 229
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 88/206 (42%), Positives = 137/206 (66%), Gaps = 2/206 (0%)
Query: 10 DSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
S+ +L P ++E+ D++SRL+ +RI+F+ +I+D+ A + AQLL+L++
Sbjct: 24 KSQARYLN--PYILEERQLNVTQLDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSA 81
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K+IS+YINSPGG VTAG+ IYDTMQFI ++T C G AASM ++LL AG++G R A
Sbjct: 82 DSGKDISIYINSPGGSVTAGLGIYDTMQFISSDVATICTGMAASMAAVLLVAGQEGKRSA 141
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
L ++R+++HQP GG GQASDIE A++I+K K+ L I + YE+V + DR++
Sbjct: 142 LTHSRVMIHQPLGGVQGQASDIEIEAKEIIKFKKELFTIIANHSHTPYEKVYRDSDRNYW 201
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKS 215
M A +A +G++D VL+ + E +
Sbjct: 202 MDAEQAKKYGMIDTVLVRKQQKVENA 227
>gi|83766223|dbj|BAE56366.1| unnamed protein product [Aspergillus oryzae]
Length = 267
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 94/178 (52%), Positives = 137/178 (76%), Gaps = 4/178 (2%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ERI+ + G++++ M+ I AQLLFLEA+NPQK I LYINSPGG VTAG+AIYDTM +I
Sbjct: 79 QERIICLNGEVDETMSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIA 138
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ST C+GQAASMGSLLL G G R+ LP++ I++HQPSGG+ GQA+DI HA++I++
Sbjct: 139 SPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSIMIHQPSGGYFGQATDIAIHAKEILR 198
Query: 161 IKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
++ +LN+IY ++ GK + +E+EK ++RD+ M A EA + G+VD++L R+ +E+
Sbjct: 199 VREQLNKIYKRHLTGKKELSLDEIEKLMERDYFMGAQEALEMGIVDEILDRRVRSKEE 256
>gi|256375240|ref|YP_003098900.1| endopeptidase Clp [Actinosynnema mirum DSM 43827]
gi|255919543|gb|ACU35054.1| Endopeptidase Clp [Actinosynnema mirum DSM 43827]
Length = 205
Score = 182 bits (463), Expect = 2e-44, Method: Composition-based stats.
Identities = 86/191 (45%), Positives = 122/191 (63%), Gaps = 2/191 (1%)
Query: 26 TNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+ G D ++ +LL+ RIVF+ ++ D +A + AQLL L AE+P+ +I YINSPGG
Sbjct: 14 STGGMTLTDSVFEQLLRSRIVFLGSEVNDEVANRLTAQLLLLSAEDPKSDIKFYINSPGG 73
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VTAGMAIYDTMQ I+P + T+ MG ASMG LLS+G G R+ LP+ R+L+HQPS G
Sbjct: 74 SVTAGMAIYDTMQLIEPDVQTWGMGMVASMGQFLLSSGTPGKRYLLPHTRVLMHQPSAGV 133
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+DI A+ KR++ EI + G+T+E + DRD +A EA ++G VD +
Sbjct: 134 GGTATDIAIQAEAFAYTKRQMAEITAQQTGQTFERITADADRDRWFTAEEALEYGFVDHI 193
Query: 205 LMSRIDIEEKS 215
L +R ++ S
Sbjct: 194 L-NREELTRSS 203
>gi|255027871|ref|ZP_05299857.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-003]
Length = 167
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 96/167 (57%), Positives = 129/167 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE + +
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYEVIAR 167
>gi|116670951|ref|YP_831884.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 /
ATP-dependent Clp protease proteolytic subunit ClpP
[Arthrobacter sp. FB24]
gi|116611060|gb|ABK03784.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
sp. FB24]
Length = 203
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 94/170 (55%), Positives = 119/170 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A IC+QLL L AENP K+I LYINSPGG VTAGMAIYD
Sbjct: 13 IYNRLLKERIIWLGSEVRDENANAICSQLLLLSAENPDKDIYLYINSPGGSVTAGMAIYD 72
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI + T G AASMG LLS+G KG R+A PNARIL+HQPSGG G ASDI+
Sbjct: 73 TMQFIPNDVVTVATGLAASMGQFLLSSGTKGKRYATPNARILMHQPSGGIGGTASDIKIQ 132
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K+ + E+ G+T E + K DRD +A EA ++G DK+
Sbjct: 133 AELILHMKKVMAELTADQTGQTVETILKDNDRDKWFTAPEALEYGFFDKI 182
>gi|297562336|ref|YP_003681310.1| endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296846784|gb|ADH68804.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 210
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 89/210 (42%), Positives = 135/210 (64%), Gaps = 10/210 (4%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
+FE + D+ + P+ +EQT + RLL++RIVF+ Q++D +A +
Sbjct: 4 TFEESPRFDARTSETQISPL-LEQTPQ---------RLLRQRIVFLGQQVDDEIANRLVG 53
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
+LL L AE+ Q++I++YINSPGG VTAGMAIYD MQ+I + T +G AASMG +LL A
Sbjct: 54 ELLLLSAEDRQRDITMYINSPGGSVTAGMAIYDVMQYIPNDVRTVGIGMAASMGQMLLCA 113
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G G R+ALP+ R+++HQPSGG G ASDI A ++ +K+ E ++ G+T E++E
Sbjct: 114 GAPGKRYALPHTRVMMHQPSGGIGGTASDIRILADQLLYVKKMFIEKISEHTGQTVEQIE 173
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
K DRD +A E+ ++G +D+VL +D+
Sbjct: 174 KDADRDRWFTAKESKEYGFIDEVLEGTLDV 203
>gi|315655111|ref|ZP_07908013.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
ATCC 51333]
gi|315657031|ref|ZP_07909916.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
gi|315490592|gb|EFU80215.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
ATCC 51333]
gi|315492423|gb|EFU82029.1| ATP-dependent Clp protease, protease subunit [Mobiluncus curtisii
subsp. holmesii ATCC 35242]
Length = 236
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/209 (41%), Positives = 135/209 (64%), Gaps = 3/209 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G A + ++P E+T G + D Y++L ++RIVF+ Q++D A + AQL
Sbjct: 27 AGMAPAMPSARY--ILPTFEERTAYGYKRQDPYAKLFEDRIVFLGNQVDDASADDVMAQL 84
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+ G
Sbjct: 85 LVLESQDPDSLITMYINSPGGSFTAMTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAGGA 144
Query: 124 KGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPNAR+L+HQP+ GQA+D+ A++I +++ L E K+ ++ E++ +
Sbjct: 145 PGKRLALPNARVLIHQPAIQGAQGQATDLAIIAEEIDRMRAWLEETLSKHSKRSVEQMHE 204
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+DRD I++A +A ++G++D+VL R
Sbjct: 205 DIDRDKILTAPQALEYGLIDQVLEPRKST 233
>gi|300859021|ref|YP_003784004.1| hypothetical protein cpfrc_01604 [Corynebacterium
pseudotuberculosis FRC41]
gi|300686475|gb|ADK29397.1| hypothetical protein cpfrc_01604 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206720|gb|ADL11062.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis C231]
gi|302331274|gb|ADL21468.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis 1002]
Length = 209
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 133/203 (65%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + ++P +E + G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 6 MQMPSARY--VLPSFIEHSTYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLE 63
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 64 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKR 123
Query: 128 FALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
LPN+R+L+HQP+ GQ SD+E A++I +++ + + ++ G+T E+V DR
Sbjct: 124 ACLPNSRVLIHQPATQGTQGQVSDLEIQAKEIERMRTLMEQTLSRHTGRTPEQVRIDTDR 183
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I++A EA ++G++D+V R
Sbjct: 184 DKILTAQEAVEYGIIDQVFDYRK 206
>gi|116334974|ref|YP_802469.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Carsonella ruddii PV]
gi|122940475|sp|Q05FR8|CLPP_CARRP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116235255|dbj|BAF35103.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Carsonella ruddii PV]
Length = 194
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 91/193 (47%), Positives = 144/193 (74%), Gaps = 1/193 (0%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V+++ +G+R D+YS++LKER++++ G IED MA+LI +QL+FL++EN + +I
Sbjct: 1 MIFLPTVIDKNIKGDRFLDLYSKMLKERVIYLNGAIEDTMASLIVSQLMFLDSENSK-DI 59
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGGVV++G++IYDT+QF+K +ST C+GQAASM ++LL+AG+KG RF PN+RI
Sbjct: 60 ILYINSPGGVVSSGLSIYDTIQFLKSDVSTICIGQAASMAAVLLAAGKKGKRFCFPNSRI 119
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP G GQASD+E HA++++ IK+ L EI + + ++ K DRD+ M+ +
Sbjct: 120 MIHQPLGYAQGQASDVEIHAREMINIKQILCEILSSHTNNSIFQIFKDTDRDNFMNCKQT 179
Query: 196 CDWGVVDKVLMSR 208
+G++D VL +
Sbjct: 180 LKYGIIDNVLYKK 192
>gi|298346554|ref|YP_003719241.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
gi|304389728|ref|ZP_07371687.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|298236615|gb|ADI67747.1| endopeptidase Clp [Mobiluncus curtisii ATCC 43063]
gi|304326904|gb|EFL94143.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 235
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 87/207 (42%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Query: 4 EGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQL 63
G A + ++P E+T G + D Y++L ++RIVF+ Q++D A + AQL
Sbjct: 27 AGMAPAMPSARY--ILPTFEERTAYGYKRQDPYAKLFEDRIVFLGNQVDDASADDVMAQL 84
Query: 64 LFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
L LE+++P I++YINSPGG TA AIYDTMQ+IKP I T C+GQAAS ++LL+ G
Sbjct: 85 LVLESQDPDSLITMYINSPGGSFTAMTAIYDTMQYIKPEIQTVCLGQAASAAAVLLAGGA 144
Query: 124 KGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
G R ALPNAR+L+HQP+ GQA+D+ A++I +++ L E K+ ++ E++ +
Sbjct: 145 PGKRLALPNARVLIHQPAIQGAQGQATDLAIIAEEIDRMRAWLEETLSKHSKRSVEQMHE 204
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
+DRD I++A +A ++G++D+VL R
Sbjct: 205 DIDRDKILTAPQALEYGLIDQVLEPRK 231
>gi|284052219|ref|ZP_06382429.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 183
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 96/183 (52%), Positives = 134/183 (73%), Gaps = 3/183 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E+ IY RL +ERI+F++ +++D +A I A +L+L++E+P
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWIGIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I LYINSPGG VTAGMAIYDTMQ+IK + T C+G AASMG+ LL+AG KG R ALPN
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGMAASMGAFLLAAGTKGKRLALPN 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
ARI++HQP GG GQA+DIE A++I++I++ LNE+ + G+T E++EK DRD+ MSA
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSA 180
Query: 193 SEA 195
+EA
Sbjct: 181 AEA 183
>gi|313763509|gb|EFS34873.1| Clp protease [Propionibacterium acnes HL013PA1]
gi|313773446|gb|EFS39412.1| Clp protease [Propionibacterium acnes HL074PA1]
gi|313793898|gb|EFS41922.1| Clp protease [Propionibacterium acnes HL110PA1]
gi|313801289|gb|EFS42540.1| Clp protease [Propionibacterium acnes HL110PA2]
gi|313808032|gb|EFS46513.1| Clp protease [Propionibacterium acnes HL087PA2]
gi|313811499|gb|EFS49213.1| Clp protease [Propionibacterium acnes HL083PA1]
gi|313813441|gb|EFS51155.1| Clp protease [Propionibacterium acnes HL025PA1]
gi|313819598|gb|EFS57312.1| Clp protease [Propionibacterium acnes HL046PA2]
gi|313822077|gb|EFS59791.1| Clp protease [Propionibacterium acnes HL036PA1]
gi|313823689|gb|EFS61403.1| Clp protease [Propionibacterium acnes HL036PA2]
gi|313826013|gb|EFS63727.1| Clp protease [Propionibacterium acnes HL063PA1]
gi|313829482|gb|EFS67196.1| Clp protease [Propionibacterium acnes HL063PA2]
gi|313831240|gb|EFS68954.1| Clp protease [Propionibacterium acnes HL007PA1]
gi|313834852|gb|EFS72566.1| Clp protease [Propionibacterium acnes HL056PA1]
gi|313839988|gb|EFS77702.1| Clp protease [Propionibacterium acnes HL086PA1]
gi|314914808|gb|EFS78639.1| Clp protease [Propionibacterium acnes HL005PA4]
gi|314919376|gb|EFS83207.1| Clp protease [Propionibacterium acnes HL050PA1]
gi|314920716|gb|EFS84547.1| Clp protease [Propionibacterium acnes HL050PA3]
gi|314924727|gb|EFS88558.1| Clp protease [Propionibacterium acnes HL036PA3]
gi|314930596|gb|EFS94427.1| Clp protease [Propionibacterium acnes HL067PA1]
gi|314954449|gb|EFS98855.1| Clp protease [Propionibacterium acnes HL027PA1]
gi|314957524|gb|EFT01627.1| Clp protease [Propionibacterium acnes HL002PA1]
gi|314961994|gb|EFT06095.1| Clp protease [Propionibacterium acnes HL002PA2]
gi|314963747|gb|EFT07847.1| Clp protease [Propionibacterium acnes HL082PA1]
gi|314968426|gb|EFT12524.1| Clp protease [Propionibacterium acnes HL037PA1]
gi|314974116|gb|EFT18212.1| Clp protease [Propionibacterium acnes HL053PA1]
gi|314976594|gb|EFT20689.1| Clp protease [Propionibacterium acnes HL045PA1]
gi|314978951|gb|EFT23045.1| Clp protease [Propionibacterium acnes HL072PA2]
gi|314984413|gb|EFT28505.1| Clp protease [Propionibacterium acnes HL005PA1]
gi|314986606|gb|EFT30698.1| Clp protease [Propionibacterium acnes HL005PA2]
gi|314990963|gb|EFT35054.1| Clp protease [Propionibacterium acnes HL005PA3]
gi|315079595|gb|EFT51588.1| Clp protease [Propionibacterium acnes HL053PA2]
gi|315081176|gb|EFT53152.1| Clp protease [Propionibacterium acnes HL078PA1]
gi|315083638|gb|EFT55614.1| Clp protease [Propionibacterium acnes HL027PA2]
gi|315087058|gb|EFT59034.1| Clp protease [Propionibacterium acnes HL002PA3]
gi|315089233|gb|EFT61209.1| Clp protease [Propionibacterium acnes HL072PA1]
gi|315095255|gb|EFT67231.1| Clp protease [Propionibacterium acnes HL038PA1]
gi|315099137|gb|EFT71113.1| Clp protease [Propionibacterium acnes HL059PA2]
gi|315100380|gb|EFT72356.1| Clp protease [Propionibacterium acnes HL046PA1]
gi|315106805|gb|EFT78781.1| Clp protease [Propionibacterium acnes HL030PA1]
gi|315108934|gb|EFT80910.1| Clp protease [Propionibacterium acnes HL030PA2]
gi|327328482|gb|EGE70244.1| Clp protease [Propionibacterium acnes HL096PA2]
gi|327329652|gb|EGE71408.1| Clp protease [Propionibacterium acnes HL096PA3]
gi|327334167|gb|EGE75881.1| Clp protease [Propionibacterium acnes HL097PA1]
gi|327444269|gb|EGE90923.1| Clp protease [Propionibacterium acnes HL043PA2]
gi|327444851|gb|EGE91505.1| Clp protease [Propionibacterium acnes HL043PA1]
gi|327446337|gb|EGE92991.1| Clp protease [Propionibacterium acnes HL013PA2]
gi|327452075|gb|EGE98729.1| Clp protease [Propionibacterium acnes HL092PA1]
gi|327454888|gb|EGF01543.1| Clp protease [Propionibacterium acnes HL087PA3]
gi|327457827|gb|EGF04482.1| Clp protease [Propionibacterium acnes HL083PA2]
gi|328752326|gb|EGF65942.1| Clp protease [Propionibacterium acnes HL020PA1]
gi|328755279|gb|EGF68895.1| Clp protease [Propionibacterium acnes HL087PA1]
gi|328758240|gb|EGF71856.1| Clp protease [Propionibacterium acnes HL025PA2]
gi|328760011|gb|EGF73594.1| Clp protease [Propionibacterium acnes HL099PA1]
Length = 244
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 52 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 111
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 112 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 171
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 172 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 231
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 232 KEYGLIDDILTS 243
>gi|302540393|ref|ZP_07292735.1| Clp protease [Streptomyces hygroscopicus ATCC 53653]
gi|302458011|gb|EFL21104.1| Clp protease [Streptomyces himastatinicus ATCC 53653]
Length = 211
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/194 (43%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YS+LL ERIVF+ ++D A + AQL+ LE P +++SL
Sbjct: 9 VLPEFTERTSSGVRTMDPYSKLLSERIVFLGTPVDDTAANDVIAQLIHLEHAGPDQDVSL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A AIYDTM+F+ I T C+GQAAS ++LL+AG G R ALP AR+L+
Sbjct: 69 YINSPGGSFGAMTAIYDTMRFVTCDIETICLGQAASAAAVLLAAGAPGKRLALPGARVLI 128
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQ S G SD+E A ++++ + L E+ V++ G++ E + +DRD I A A
Sbjct: 129 HQAALSEPIEGTTSDLEIQAGELLRTQALLEEMLVRHTGQSAERIRADIDRDRIFDAEAA 188
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V SR
Sbjct: 189 VAYGLVDGVTQSRK 202
>gi|255532580|ref|YP_003092952.1| endopeptidase Clp [Pedobacter heparinus DSM 2366]
gi|255345564|gb|ACU04890.1| Endopeptidase Clp [Pedobacter heparinus DSM 2366]
Length = 226
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 79/192 (41%), Positives = 131/192 (68%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ + P + E+ D++SRL+ +RI+F+ +++ A +I AQLLFL++ + +K+I
Sbjct: 35 VAMTPYITEERQLNVAQMDVFSRLMMDRIIFLGEAVDERNANVIQAQLLFLQSADAEKDI 94
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LY+NSPGG V AG+ IYDTMQFI P ++T C G A SMGS+LL AG G R AL +AR+
Sbjct: 95 QLYVNSPGGSVYAGLGIYDTMQFIAPDVATICTGIALSMGSVLLCAGAAGKRSALQHARV 154
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQ SGG G A+D++ + ++++++ L +I K+ G+ YE + + RD+ M+++EA
Sbjct: 155 MIHQTSGGTQGTATDMDISVRQVLQVQKELYQIIAKHSGQPYERINEAASRDYWMTSAEA 214
Query: 196 CDWGVVDKVLMS 207
++G+VD++L
Sbjct: 215 KEFGMVDEILSK 226
>gi|327328169|gb|EGE69938.1| Clp protease [Propionibacterium acnes HL103PA1]
Length = 244
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 78/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 52 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 111
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 112 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 171
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G+T E++ K +DRD ++A A
Sbjct: 172 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQTVEQISKDIDRDKYLTAQGA 231
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 232 KEYGLIDDILTS 243
>gi|184200754|ref|YP_001854961.1| ATP-dependent Clp protease proteolytic subunit [Kocuria rhizophila
DC2201]
gi|183580984|dbj|BAG29455.1| ATP-dependent Clp protease proteolytic subunit [Kocuria rhizophila
DC2201]
Length = 217
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 93/191 (48%), Positives = 125/191 (65%), Gaps = 1/191 (0%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
P + + G+ Y +Y+RLLKERI+++ ++ D A LIC+Q+L L AE+P+ +I
Sbjct: 13 PATPRMEDMAPGGQDDY-VYNRLLKERIIWLGSEVRDTNANLICSQMLLLSAEDPEADIF 71
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGMAIYDTMQ I + T G AASMG LLS+G KG R+A PNARIL
Sbjct: 72 LYINSPGGSVTAGMAIYDTMQLIPNDVVTVATGLAASMGQFLLSSGAKGKRYATPNARIL 131
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G ASDI A+ I+ +K+RL E+ + G+T E + + DRD+ A A
Sbjct: 132 MHQPSGGMGGTASDIRVQAELILSMKQRLAELTAEQTGQTLETILRDNDRDNWFDAQRAL 191
Query: 197 DWGVVDKVLMS 207
++G D + S
Sbjct: 192 EYGFFDHIAQS 202
>gi|2921510|gb|AAC04810.1| clp-like energy-dependent protease [Fritillaria agrestis]
Length = 267
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ + +A + +QL+ L + + +I
Sbjct: 79 PMMPAVM--TPGGP--LDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDEESDIL 134
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+ +PNARI+
Sbjct: 135 VYLNCPGGSTYSILAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYTMPNARIM 194
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + V+ + +++++Y G+T E+V++ +RD SASEA
Sbjct: 195 IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDQMYAAFTGQTLEKVQEYTERDRFFSASEAL 254
Query: 197 DWGVVDKVLMS 207
++G+VD VL +
Sbjct: 255 EFGLVDGVLET 265
>gi|86608099|ref|YP_476861.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|115311344|sp|Q2JHM1|CLPP1_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86556641|gb|ABD01598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 203
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 98/200 (49%), Positives = 141/200 (70%), Gaps = 6/200 (3%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + + RL +ERI+F+ I+D +A I +L+L +++P
Sbjct: 1 MPIGVPRVPYRLP-GEPYSQWISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
QK+I +YINSPGG VTAGMAIYDTM IKP I T C+GQAASMG+ LL+AG KG RFALP
Sbjct: 60 QKDIVMYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALP 119
Query: 132 NARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
++RI+LHQPS G QASDIE A++ +++KRR+NEI + G+ E++E+ ++RD +
Sbjct: 120 HSRIMLHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYL 179
Query: 191 SASEACDWGVVDKVLMSRID 210
SA+EA +G+VD+V+ R +
Sbjct: 180 SATEAQAYGIVDRVIQERSE 199
>gi|314923824|gb|EFS87655.1| Clp protease [Propionibacterium acnes HL001PA1]
gi|314966161|gb|EFT10260.1| Clp protease [Propionibacterium acnes HL082PA2]
gi|314982026|gb|EFT26119.1| Clp protease [Propionibacterium acnes HL110PA3]
gi|315090840|gb|EFT62816.1| Clp protease [Propionibacterium acnes HL110PA4]
gi|315095052|gb|EFT67028.1| Clp protease [Propionibacterium acnes HL060PA1]
gi|315104285|gb|EFT76261.1| Clp protease [Propionibacterium acnes HL050PA2]
Length = 244
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 52 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 111
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 112 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 171
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 172 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 231
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 232 KEYGLIDDILTS 243
>gi|240170932|ref|ZP_04749591.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
kansasii ATCC 12478]
Length = 202
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 118/177 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+P K+ISLYINSPGG ++AGMAIYD
Sbjct: 20 VYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLYINSPGGSISAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 80 TMTLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ IK+ + + + G+ E +E DRD +A EA ++G VD ++ +
Sbjct: 140 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAPEALEYGFVDHIITRATSV 196
>gi|223947307|gb|ACN27737.1| unknown [Zea mays]
Length = 310
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 122/175 (69%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ ++D A LI +QLL L+AE+ K+I L+INSPGG +TAGM
Sbjct: 71 ELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 130
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+YD M+F K +ST C G AASMG+ LL+AG KG R+ +PNARI++HQPSGG G+ +++
Sbjct: 131 VYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARIMIHQPSGGAGGKVTEM 190
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K ++N+I + GK+ E++++ D+ MS SEA D+G+VD ++
Sbjct: 191 GLQIREMMYEKIKINKIMSRITGKSEEQIDEDTKFDYFMSPSEAKDYGIVDNIID 245
>gi|223369879|gb|ACM88806.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
sorokiniana]
Length = 201
Score = 182 bits (462), Expect = 3e-44, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 131/193 (67%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ +++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQ 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K + +YINSPGG VT G+A+YD M +IK ++T C+G AASM S +L+ G++G R ALP
Sbjct: 60 NKGLYIYINSPGGSVTCGIAVYDAMNYIKSDVTTICVGTAASMASFILAGGDRGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ ++++++I+R++ IY + G+ + + +DRD +S
Sbjct: 120 HSRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYAERTGQPLSRISRDMDRDQFLS 179
Query: 192 ASEACDWGVVDKV 204
A EA D+G+VD+V
Sbjct: 180 AREAKDYGLVDQV 192
>gi|41408379|ref|NP_961215.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
subsp. paratuberculosis K-10]
gi|118462557|ref|YP_880940.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium avium
104]
gi|67460505|sp|Q73XM8|CLPP2_MYCPA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|41396735|gb|AAS04598.1| ClpP [Mycobacterium avium subsp. paratuberculosis K-10]
gi|118163844|gb|ABK64741.1| Clp protease [Mycobacterium avium 104]
Length = 199
Score = 182 bits (461), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 118/173 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+P K+ISLYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLSERIIFLGSEVNDDVANRLCAQILLLAAEDPTKDISLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G++ E +E DRD +A EA ++G VD ++
Sbjct: 137 AEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITR 189
>gi|3599968|gb|AAC35489.1| clp protease [Arabidopsis thaliana]
Length = 310
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+AE+ +++I+L+INSPGG +TAGM
Sbjct: 84 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMG 143
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 144 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEM 203
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G++D V+
Sbjct: 204 SIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 258
>gi|134097946|ref|YP_001103607.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora
erythraea NRRL 2338]
gi|291009144|ref|ZP_06567117.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora
erythraea NRRL 2338]
gi|133910569|emb|CAM00682.1| ATP-dependent Clp protease proteolytic subunit 1 [Saccharopolyspora
erythraea NRRL 2338]
Length = 192
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 95/185 (51%), Positives = 125/185 (67%), Gaps = 1/185 (0%)
Query: 23 VEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
+ T G D +Y RLL+ERI+ + Q+ED +A IC+QL+ L AE+P+++ISLYINS
Sbjct: 1 MRTTTNGLSLNDSVYERLLRERIIVLGSQVEDSIANQICSQLILLAAEDPERDISLYINS 60
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG V AGMAIYDTMQ I+P ++T MG AASMG LLSAG +G RFALP+ARI++HQPS
Sbjct: 61 PGGSVPAGMAIYDTMQLIQPDVATVAMGFAASMGQFLLSAGARGKRFALPHARIMMHQPS 120
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G G ASDI A+ K KR + E+ + G+ E++E DRD +A EA D+G V
Sbjct: 121 AGIGGTASDIAIQAEVFAKNKREMAELIAEQTGQPIEKIEADSDRDKWFTAEEARDYGFV 180
Query: 202 DKVLM 206
D +
Sbjct: 181 DHIAT 185
>gi|300786519|ref|YP_003766810.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
gi|299796033|gb|ADJ46408.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
Length = 193
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 29 GERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
G+ D +Y +LL++RIVF+ ++ D +A I AQLL L A++P K+I+ YINSPGG VT
Sbjct: 13 GQTLNDSVYEQLLRDRIVFLGSEVNDDIANRIIAQLLLLAADDPAKDITFYINSPGGSVT 72
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AGMAIYDTMQ +KP +ST+ +G ASMG LLS+G G R+ LPN RI++HQPS G SG
Sbjct: 73 AGMAIYDTMQLVKPDVSTWGLGFVASMGQFLLSSGTPGKRYLLPNTRIVMHQPSAGISGA 132
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+DI A+ K+KRR+ EI + G+T E + DRD A EA +G VD ++
Sbjct: 133 AADIAIQAEVFGKMKRRIAEITARQTGQTVERITADADRDRWFDADEALTYGFVDHIVT 191
>gi|300788577|ref|YP_003768868.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
gi|299798091|gb|ADJ48466.1| protease subunit of ATP-dependent Clp protease [Amycolatopsis
mediterranei U32]
Length = 201
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 90/172 (52%), Positives = 116/172 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERIV + ++ D +A I AQLL L+A++ + +I YINSPGG VTAG AIYD
Sbjct: 21 VFERLLQERIVVLGSEVNDEIANRITAQLLLLDADDAESDIRFYINSPGGSVTAGFAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T+ MG AASMG LLS+G G R+ALP+ARIL+HQPS G G ASDI
Sbjct: 81 TMQLIRPDVATYAMGMAASMGQFLLSSGTPGKRYALPHARILMHQPSAGVGGTASDIAIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A K KR L +I G+T E++ K DRD +A EA D+G VD VL
Sbjct: 141 ADLFNKWKRELAQITADQTGQTVEQIIKDGDRDRWFTAQEAKDYGFVDHVLT 192
>gi|167462695|ref|ZP_02327784.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 165
Score = 182 bits (461), Expect = 4e-44, Method: Composition-based stats.
Identities = 91/163 (55%), Positives = 124/163 (76%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
VF+ Q+ D +A I AQLLFL A++P K+ISLYINSPGG +TAGMAIYDTMQ+IKP +S
Sbjct: 2 VFLGTQVNDAVANSIIAQLLFLAAQDPDKDISLYINSPGGSITAGMAIYDTMQYIKPDVS 61
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T C+G AASMG+ LL+AG G R+ALPN+ +++HQP GG GQA+DIE A+ I+K++
Sbjct: 62 TICVGMAASMGAFLLNAGAVGKRYALPNSEVMIHQPLGGAEGQATDIEIRAKRIIKMREN 121
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
LN I + G+ E++E+ DRD+ MSASEA ++G++DKV+
Sbjct: 122 LNRILSERTGQPLEKIERDTDRDYFMSASEAKEYGLIDKVIER 164
>gi|307109118|gb|EFN57356.1| hypothetical protein CHLNCDRAFT_142728 [Chlorella variabilis]
Length = 267
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 82/172 (47%), Positives = 118/172 (68%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D + LL++RIVF G++ D A I +QLL L+A++P K+I ++INSPGG VTAGM IY
Sbjct: 75 DPFGLLLRQRIVFFGGEVNDFSADAIISQLLLLDAQDPTKDIKMFINSPGGSVTAGMGIY 134
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D M + + T+C G AASMG+ LL AG +G R+++PNARI++HQP GG SG A DIE
Sbjct: 135 DAMMMCRADVQTYCFGLAASMGAFLLGAGTRGKRYSMPNARIMIHQPLGGASGAAVDIEI 194
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++I+ K LN I + G+ E++E+ DRD MS EA ++G++D ++
Sbjct: 195 QAKEIMYHKANLNRIMSQYTGQPIEKIEEDTDRDRYMSPLEAKNYGLIDSLV 246
>gi|169628671|ref|YP_001702320.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
abscessus ATCC 19977]
gi|169240638|emb|CAM61666.1| ATP-dependent Clp protease, proteolytic subunit 2 [Mycobacterium
abscessus]
Length = 197
Score = 181 bits (460), Expect = 4e-44, Method: Composition-based stats.
Identities = 88/173 (50%), Positives = 122/173 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ Q++D +A +CAQ+L L AE+P K+I LYINSPGG ++AGMAI+D
Sbjct: 14 VYERLLSERIIFLGQQVDDDIANKLCAQILLLTAEDPTKDIHLYINSPGGSISAGMAIFD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ + I+T+ MG AASMG LL+AG KG R ALP+ARIL+HQP GG +G ASDI
Sbjct: 74 TMQLSECDIATYAMGMAASMGEFLLAAGTKGKRHALPHARILMHQPLGGVTGSASDIAIQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + GK+ E++E+ DRD +A EA ++G VDK++
Sbjct: 134 AEQFQVIKKEMFRLNAEFTGKSIEQIEQDSDRDRWFTAPEALEYGFVDKIITR 186
>gi|303274250|ref|XP_003056447.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462531|gb|EEH59823.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 209
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 83/199 (41%), Positives = 127/199 (63%), Gaps = 9/199 (4%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV+E R + ++L+ +RI+ + G ++D LI AQLL+L+A +P ++I++Y+
Sbjct: 7 PMVME------RFQSVATQLMNQRIIRLGGAVDDDSCNLIVAQLLWLDAADPNQDITIYV 60
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG---MRFALPNARIL 136
NSPGG VTAGMA++DTM+ ++P +ST C+G AASMG + ++LPN+RI+
Sbjct: 61 NSPGGSVTAGMAVFDTMRHVRPNVSTVCVGLAASMGKFTYEIHLRPPYLFSYSLPNSRIM 120
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQA+DIE A +I+ K LN + GK E V + DRD MSA+EA
Sbjct: 121 IHQPLGGAQGQAADIEIQANEIMHHKSTLNGYLAEFTGKPLEMVMEDTDRDFFMSATEAK 180
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G++D V+ D+ +S
Sbjct: 181 EYGLIDTVIEHPTDVAVRS 199
>gi|86605372|ref|YP_474135.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-3-3Ab]
gi|115311343|sp|Q2JWJ1|CLPP1_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86553914|gb|ABC98872.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 203
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 97/200 (48%), Positives = 143/200 (71%), Gaps = 6/200 (3%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + + RL +ERI+F+ I+D++A I +L+L +++P
Sbjct: 1 MPIGVPRVPYRLP-GEPYSQWISLDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
QK+I +YINSPGG VTAGMAIYDTM +KP I T C+GQAASMG+ LL+AG KG RFALP
Sbjct: 60 QKDIVMYINSPGGSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALP 119
Query: 132 NARILLHQPS-GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
++RI+LHQPS G GQASDIE A++ +++KRR+NE+ + G+ E++E+ ++RD +
Sbjct: 120 HSRIMLHQPSLGMIQGQASDIEIRARETLRVKRRMNELLAQMTGQPLEKIERDVERDFYL 179
Query: 191 SASEACDWGVVDKVLMSRID 210
SA+EA +G+VD+V+ R +
Sbjct: 180 SATEAQAYGIVDRVIQERSE 199
>gi|254798629|ref|YP_003058293.1| proteolytic subunit 2 of clp protease [Parachlorella kessleri]
gi|229915577|gb|ACQ90920.1| proteolytic subunit 2 of clp protease [Parachlorella kessleri]
Length = 202
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 80/203 (39%), Positives = 131/203 (64%), Gaps = 6/203 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ G+++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPAAQWVDLYNRLYRERVLFLCGELDDELANQLIGIMLYLNAEEK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K I +YINSPGG VT G+A+YD M +IK ++T C+G AASM S +L+ G G R ALP
Sbjct: 60 NKGIYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGAYGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ +Q++++I+R + IY + G+ + + +DRD MS
Sbjct: 120 HSRIMIHQPEGGSQGQASEVLSESQEVMRIRREVGRIYAERTGQPLSRISRDMDRDQFMS 179
Query: 192 ASEACDWGVVDKV-LMSRIDIEE 213
A E ++G+VD+V + ++
Sbjct: 180 ARETKEYGIVDQVAIDTKWSTPS 202
>gi|115436866|ref|NP_001043155.1| Os01g0507900 [Oryza sativa Japonica Group]
gi|113532686|dbj|BAF05069.1| Os01g0507900 [Oryza sativa Japonica Group]
gi|215734851|dbj|BAG95573.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 314
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 120/175 (68%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ ++D A LI +QLL L+AE+ K+I L+INSPGG +TAGM
Sbjct: 75 ELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMG 134
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+YD M+F K IST C G AASMG+ LL+AG KG RF +PNARI++HQPSGG G+ +++
Sbjct: 135 VYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEM 194
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K ++N+I + GK E++++ D+ MS EA D+G+VD V+
Sbjct: 195 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVID 249
>gi|56201842|dbj|BAD73292.1| putative ATP-dependent Clp protease, proteolytic subunit [Oryza
sativa Japonica Group]
gi|125526129|gb|EAY74243.1| hypothetical protein OsI_02123 [Oryza sativa Indica Group]
gi|125570557|gb|EAZ12072.1| hypothetical protein OsJ_01953 [Oryza sativa Japonica Group]
Length = 308
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 81/175 (46%), Positives = 120/175 (68%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ ++D A LI +QLL L+AE+ K+I L+INSPGG +TAGM
Sbjct: 69 ELDTTNMLLRQRIVFLGSPVDDMSADLIISQLLLLDAEDKTKDIKLFINSPGGSITAGMG 128
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+YD M+F K IST C G AASMG+ LL+AG KG RF +PNARI++HQPSGG G+ +++
Sbjct: 129 VYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKVTEM 188
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K ++N+I + GK E++++ D+ MS EA D+G+VD V+
Sbjct: 189 GLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGIVDSVID 243
>gi|296170471|ref|ZP_06852059.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
gi|295894942|gb|EFG74663.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
parascrofulaceum ATCC BAA-614]
Length = 199
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLSERIIFLGSEVNDEVANRLCAQILLLAAEDADKDISLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G++ E +E DRD +A EA ++G VD ++
Sbjct: 137 AEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITR 189
>gi|282854723|ref|ZP_06264058.1| Clp protease [Propionibacterium acnes J139]
gi|289426420|ref|ZP_06428163.1| Clp protease [Propionibacterium acnes SK187]
gi|289428779|ref|ZP_06430462.1| Clp protease [Propionibacterium acnes J165]
gi|295131121|ref|YP_003581784.1| Clp protease [Propionibacterium acnes SK137]
gi|282582305|gb|EFB87687.1| Clp protease [Propionibacterium acnes J139]
gi|289153148|gb|EFD01866.1| Clp protease [Propionibacterium acnes SK187]
gi|289158177|gb|EFD06397.1| Clp protease [Propionibacterium acnes J165]
gi|291375909|gb|ADD99763.1| Clp protease [Propionibacterium acnes SK137]
Length = 229
Score = 181 bits (460), Expect = 5e-44, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 37 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 96
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 97 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 156
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 157 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 216
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 217 KEYGLIDDILTS 228
>gi|257055263|ref|YP_003133095.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Saccharomonospora viridis DSM 43017]
gi|256585135|gb|ACU96268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Saccharomonospora viridis DSM 43017]
Length = 209
Score = 181 bits (459), Expect = 5e-44, Method: Composition-based stats.
Identities = 86/202 (42%), Positives = 135/202 (66%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + + ++P VE+T+ G + + Y++L +ER + + Q++D A + AQLL LE
Sbjct: 5 QLPQARY--ILPSYVERTSYGVKESNPYNKLYEERQIMLGVQVDDASANDVMAQLLHLEH 62
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+P ++I+LYINSPGG TA MAIYDTMQ+++P I T C+GQAAS ++LL+AG KG R
Sbjct: 63 EDPDRDITLYINSPGGSFTAMMAIYDTMQYVRPDIQTVCLGQAASAAAVLLAAGTKGKRL 122
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPN+R+L+HQP+ GQ SD+E A +I +++R + K+ K+ +EV ++RD
Sbjct: 123 ALPNSRVLIHQPATEGAYGQVSDLEIQAAEIQRVRRLMETTLAKHTNKSADEVRVDIERD 182
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++ EA ++G++D VL R
Sbjct: 183 KILTPEEAKEYGIIDHVLEYRK 204
>gi|213580888|ref|ZP_03362714.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-0664]
Length = 175
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 115/169 (68%), Positives = 147/169 (86%), Gaps = 2/169 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASMGAFLLT 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+
Sbjct: 119 AGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELI 167
>gi|313682639|ref|YP_004060377.1| ATP-dependent clp protease proteolytic subunit clpp [Sulfuricurvum
kujiense DSM 16994]
gi|313155499|gb|ADR34177.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sulfuricurvum
kujiense DSM 16994]
Length = 198
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 91/192 (47%), Positives = 134/192 (69%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P V + + RGER +D++S+LL +R++ +T I+DHM +I +QLL+LEA +P + I
Sbjct: 1 MPFIPTVKDVSPRGERYFDLFSKLLGDRVIVITEAIDDHMMGVIVSQLLYLEAMDPDEPI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YI+SPGG V AG+AI DTM I P+ T+ MG ASM ++L + GEKG R+ LPNA +
Sbjct: 61 HMYISSPGGSVMAGLAILDTMNLINAPVHTYAMGLVASMAAVLFTCGEKGHRYMLPNAEV 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++HQP GG+SGQASDIE H + I+ +KRRL I + GK+ + +EK DRD+ M A EA
Sbjct: 121 MIHQPLGGYSGQASDIEIHTKHILNLKRRLYVILAEATGKSAKVIEKESDRDNYMEAKEA 180
Query: 196 CDWGVVDKVLMS 207
+G+ D++L
Sbjct: 181 IAFGLADEILTK 192
>gi|289645297|ref|ZP_06477293.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
gi|289504893|gb|EFD25995.1| Endopeptidase Clp [Frankia symbiont of Datisca glomerata]
Length = 201
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 86/190 (45%), Positives = 124/190 (65%), Gaps = 3/190 (1%)
Query: 25 QTNRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
Q+ G ++ D ++ RLL+ RIVF+ +ED +A ICA+LL L AE+ +++I LYINSP
Sbjct: 7 QSGNGYQA-DGPVFDRLLRSRIVFLGSVVEDAVANEICAKLLLLSAEDRERDIQLYINSP 65
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG V+AGMAIYDTMQ++ + T +G A SMG LL AG G R+AL +A++++HQPSG
Sbjct: 66 GGSVSAGMAIYDTMQYVTNDVVTVALGFAGSMGQFLLCAGAAGKRYALAHAQVMMHQPSG 125
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G G ASDI + + KR + E + G+T E++E+ DRD +A EA D+G VD
Sbjct: 126 GLGGTASDIAIQLEQTLYTKRTIQERIAFHTGRTVEQIERDSDRDRWFTAREARDYGFVD 185
Query: 203 KVLMSRIDIE 212
V+ + D+
Sbjct: 186 HVVTAAADLP 195
>gi|18281939|sp|Q9CBY3|CLPP1_MYCLE RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 200
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 86/186 (46%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 23 VEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
+ ++G D +Y RLL ERI+F+ ++ D++A +CAQ+L L AE+ K+ISLYINS
Sbjct: 7 IRSNSQGFNLTDSVYERLLSERIIFLGSEVNDNIANRLCAQILLLAAEDAFKDISLYINS 66
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG ++AGMAIYDTM I+T+ MG AASMG LL+AG +G R+ALP+ARIL+HQP
Sbjct: 67 PGGSISAGMAIYDTMVLAPCDIATYAMGMAASMGEFLLAAGTRGKRYALPHARILMHQPL 126
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GG +G A+DI A+ IK+ + + + G+ E +E DRD +ASEA ++G V
Sbjct: 127 GGVTGSAADIAIQAEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTASEALEYGFV 186
Query: 202 DKVLMS 207
D ++
Sbjct: 187 DHIITR 192
>gi|303274444|ref|XP_003056542.1| endopeptidase clp chloroplast precursor [Micromonas pusilla
CCMP1545]
gi|226462626|gb|EEH59918.1| endopeptidase clp chloroplast precursor [Micromonas pusilla
CCMP1545]
Length = 283
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 83/172 (48%), Positives = 123/172 (71%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D + LL++RIVF+ Q++D A + +QLL L+A++P+K+I L+INSPGG VTAGM IY
Sbjct: 77 DPFGLLLRQRIVFLGNQVDDFTADAVISQLLLLDAQDPKKDIKLFINSPGGSVTAGMGIY 136
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ + +ST CMG AASMG+ LL+AG +G R ++PNARI++HQP GG SGQA DIE
Sbjct: 137 DAMQMCRADVSTVCMGLAASMGAFLLTAGSRGKRLSMPNARIMIHQPLGGASGQAVDIEI 196
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
AQ+I+ K LN + + + +++++ DRD MS EA ++G++D+++
Sbjct: 197 QAQEIMFHKANLNRLMAFHTDQDVKQIDEDTDRDRYMSPLEAKNYGIIDEII 248
>gi|226507940|ref|NP_001149210.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
gi|195625490|gb|ACG34575.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
Length = 285
Score = 181 bits (459), Expect = 6e-44, Method: Composition-based stats.
Identities = 79/175 (45%), Positives = 121/175 (69%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ ++D A LI +QLL L+AE+ K+I L+INSPGG +TAGM
Sbjct: 71 ELDTTNMLLRQRIVFLGSPVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 130
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+YD M+F K +ST C G AASMG+ LL+AG KG R+ PNARI++HQPSGG G+ +++
Sbjct: 131 VYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCXPNARIMIHQPSGGAGGKVTEM 190
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K ++N+I + GK+ E++++ D+ MS SEA D+G+VD ++
Sbjct: 191 GLQIREMMYEKIKINKIMSRITGKSEEQIDEDTKFDYFMSPSEAKDYGIVDNIID 245
>gi|108773366|ref|YP_635828.1| ATP-dependent Clp protease proteolytic subunit [Oltmannsiellopsis
viridis]
gi|122195154|sp|Q20F17|CLPP_OLTVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|82541948|gb|ABB81989.1| proteolytic subunit 2 of clp protease [Oltmannsiellopsis viridis]
Length = 195
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 81/196 (41%), Positives = 133/196 (67%), Gaps = 5/196 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ +YINSPGG VT G+A+YDTM +IK ++T C+G AASM S +L+ G +G R ALP
Sbjct: 60 SKDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ ++++++I+R++ +IY + G+ + + LDRD +S
Sbjct: 120 HSRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDRDQFLS 179
Query: 192 ASEACDWGVVDKVLMS 207
A EA D+G+VD+V S
Sbjct: 180 AREAKDYGIVDQVATS 195
>gi|308276963|gb|ADO26862.1| ATP-dependent Clp protease proteolytic subunit 1 [Corynebacterium
pseudotuberculosis I19]
Length = 209
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 81/203 (39%), Positives = 132/203 (65%), Gaps = 3/203 (1%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ + ++P +E G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 6 MQMPSARY--VLPSFIEHATYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLE 63
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 64 GLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAPGKR 123
Query: 128 FALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
LPN+R+L+HQP+ GQ SD+E A++I +++ + + ++ G+T E+V DR
Sbjct: 124 ACLPNSRVLIHQPATQGTQGQVSDLEIQAKEIERMRTLMEQTLSRHTGRTPEQVRIDTDR 183
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D I++A EA ++G++D+V R
Sbjct: 184 DKILTAQEAVEYGIIDQVFDYRK 206
>gi|307324651|ref|ZP_07603857.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
gi|306889533|gb|EFN20513.1| Endopeptidase Clp [Streptomyces violaceusniger Tu 4113]
Length = 220
Score = 181 bits (459), Expect = 7e-44, Method: Composition-based stats.
Identities = 86/183 (46%), Positives = 125/183 (68%), Gaps = 1/183 (0%)
Query: 31 RSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
R D + S+LL +RIVF+ Q+++ A +CAQ+L L AE+P+ +ISLYINSPGG VTAG
Sbjct: 28 RFDDHLASQLLTQRIVFLGTQVDEVSANRVCAQMLLLSAEDPRSDISLYINSPGGSVTAG 87
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+AIYDTM+ I +ST MG AASMG LL+ G G R+ALPN+RI++HQPS G G +
Sbjct: 88 LAIYDTMRLIPNDVSTLTMGFAASMGQFLLTVGATGKRYALPNSRIMMHQPSAGIGGSTA 147
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DI A+++ +KR + I ++ G++ E + + DRD +A +A ++G+VD+VL S
Sbjct: 148 DIAIQAENLEFMKRSIERITAEHTGQSVETISRDGDRDRWFTAEQAKEYGMVDRVLESLA 207
Query: 210 DIE 212
D+
Sbjct: 208 DVR 210
>gi|226360645|ref|YP_002778423.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
gi|226239130|dbj|BAH49478.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
Length = 194
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 93/187 (49%), Positives = 136/187 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T GERS+DI+SRLL ERIVF+ +I+D +A ++ AQLL L+A++ +EI LY
Sbjct: 6 IPHVIERTPAGERSFDIFSRLLNERIVFLGTEIDDGVANVVMAQLLHLQADSSDQEIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA +AIYDTMQF++P I+T+CMGQAAS ++LL+AG +G R L ++R+LLH
Sbjct: 66 INSPGGSTTAMLAIYDTMQFLRPTIATYCMGQAASAAAVLLAAGTEGHRHVLAHSRVLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS +G SD+ A +I++++ + I K+ G+T E + + DRD I +A EA D+
Sbjct: 126 QPSTQGNGTISDLALQAAEIMRVRSQTESILSKHTGQTVERLRRDTDRDRIFTAQEAIDY 185
Query: 199 GVVDKVL 205
G+ D V+
Sbjct: 186 GLADTVV 192
>gi|7524837|ref|NP_045839.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
gi|3023501|sp|P56317|CLPP_CHLVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2224431|dbj|BAA57915.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
Length = 201
Score = 180 bits (458), Expect = 7e-44, Method: Composition-based stats.
Identities = 80/193 (41%), Positives = 132/193 (68%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ +++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQ 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K + +YINSPGG VT G+A+YD M +IK ++T C+G AASM S +L+ G++G R ALP
Sbjct: 60 NKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ +Q++++I+R++ IY + G+T V + +DRD +S
Sbjct: 120 HSRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERTGQTLSRVSRDMDRDQFLS 179
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD+V
Sbjct: 180 AREAKEYGLVDQV 192
>gi|118618992|ref|YP_907324.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
ulcerans Agy99]
gi|183983782|ref|YP_001852073.1| ATP-dependent Clp protease proteolytic subunit ClpP1 [Mycobacterium
marinum M]
gi|118571102|gb|ABL05853.1| ATP-dependent CLP protease proteolytic subunit 1 ClpP1
[Mycobacterium ulcerans Agy99]
gi|183177108|gb|ACC42218.1| ATP-dependent CLP protease proteolytic subunit 1 ClpP1
[Mycobacterium marinum M]
Length = 198
Score = 180 bits (458), Expect = 8e-44, Method: Composition-based stats.
Identities = 83/182 (45%), Positives = 121/182 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+I+LYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLSERIIFLGSEVNDEVANRLCAQILLLAAEDASKDINLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ IK+ + + + G++ E +E DRD +A EA ++G VD ++ + +
Sbjct: 137 AEQFAVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAPEALEYGFVDHIITRAAHVNGE 196
Query: 215 SK 216
++
Sbjct: 197 AQ 198
>gi|126030155|pdb|2C8T|A Chain A, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030156|pdb|2C8T|B Chain B, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030157|pdb|2C8T|C Chain C, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030158|pdb|2C8T|D Chain D, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030159|pdb|2C8T|E Chain E, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030160|pdb|2C8T|F Chain F, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030161|pdb|2C8T|G Chain G, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030162|pdb|2C8T|H Chain H, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030163|pdb|2C8T|I Chain I, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030164|pdb|2C8T|J Chain J, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030165|pdb|2C8T|K Chain K, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030166|pdb|2C8T|L Chain L, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030167|pdb|2C8T|M Chain M, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
gi|126030168|pdb|2C8T|N Chain N, The 3.0 A Resolution Structure Of Caseinolytic Clp
Protease 1 From Mycobacterium Tuberculosis
Length = 206
Score = 180 bits (458), Expect = 9e-44, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 21 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 81 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+ E +E DRD +A+EA ++G VD ++
Sbjct: 141 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 193
>gi|325963649|ref|YP_004241555.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
phenanthrenivorans Sphe3]
gi|323469736|gb|ADX73421.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
phenanthrenivorans Sphe3]
Length = 207
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 93/170 (54%), Positives = 121/170 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A IC+QLL L AENP K+I LYINSPGG VTAGMAIYD
Sbjct: 13 IYNRLLKERIIWLGSEVRDDNANAICSQLLLLSAENPDKDIYLYINSPGGSVTAGMAIYD 72
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI + T G AASMG LLS+G KG R+A PNAR+L+HQPSGG G ASDI+
Sbjct: 73 TMQFIPNDVVTVATGLAASMGQFLLSSGTKGKRYATPNARVLMHQPSGGIGGTASDIKIQ 132
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K+ + E+ + G+T E + K DRD +A+EA ++G DK+
Sbjct: 133 AELILHMKKVMAELTAEQTGQTVETILKDNDRDKWFTATEALEYGFFDKI 182
>gi|308235224|ref|ZP_07665961.1| ATP-dependent Clp protease proteolytic subunit [Gardnerella
vaginalis ATCC 14018]
gi|311114525|ref|YP_003985746.1| endopeptidase Clp [Gardnerella vaginalis ATCC 14019]
gi|310946019|gb|ADP38723.1| endopeptidase Clp [Gardnerella vaginalis ATCC 14019]
Length = 222
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 83/193 (43%), Positives = 133/193 (68%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P EQT G ++ D Y++L ++RI+F+ Q++D A I AQLL LE+ +P +++ +
Sbjct: 30 VLPQFGEQTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMAQLLVLESMDPNRDVMM 89
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG G R LPNAR+L+
Sbjct: 90 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGSAGKRMILPNARVLI 149
Query: 138 HQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G+A++IE A+++++++ L K+ G+ E + K ++ D I++A +A
Sbjct: 150 HQPAMGQDFGKATEIELQAKEMLRLREWLESTLAKHTGQDIERIRKDIEVDTILTAPQAK 209
Query: 197 DWGVVDKVLMSRI 209
++G+VD+VL R
Sbjct: 210 EYGMVDEVLEHRS 222
>gi|29831990|ref|NP_826624.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
avermitilis MA-4680]
gi|67460534|sp|Q82CA6|CLPP3_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|29609108|dbj|BAC73159.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces avermitilis MA-4680]
Length = 219
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 89/171 (52%), Positives = 121/171 (70%), Gaps = 1/171 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I LYINSPGG +TAGMAIYD
Sbjct: 35 VYNRLLGERIIFLGQAVDDDIANKITAQLLLLAS-DPDKDIYLYINSPGGSITAGMAIYD 93
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+IK + T MG AASMG LLSAG G RFALPNA IL+HQPS G +G ASDI+ H
Sbjct: 94 TMQYIKNDVVTIAMGMAASMGQFLLSAGTPGKRFALPNAEILIHQPSAGLAGSASDIKIH 153
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+ ++ K+R+ E+ + G+T E+V + DRD EA ++G++D ++
Sbjct: 154 AERLLHTKKRMAELTAFHTGQTVEQVTRDSDRDRWFDPVEAKEYGLIDDIM 204
>gi|227488327|ref|ZP_03918643.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
gi|227091737|gb|EEI27049.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51867]
Length = 207
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 137/204 (67%), Gaps = 3/204 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 MQNMPQARY--ILPSFVEHSSYGAKESNPYNKLFEERIIFLGAQVDDTSANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG KG
Sbjct: 61 EGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAKGK 120
Query: 127 RFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNAR+L+HQP+ GQ SD+E A++I ++++ + + + G+T E+V D
Sbjct: 121 RAALPNARVLIHQPATQGTQGQVSDLEIQAREIERMRKLMEDTLAHHTGQTSEQVRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G++D+V R
Sbjct: 181 RDKILTAQEAVEYGLIDEVFDYRK 204
>gi|255326612|ref|ZP_05367689.1| Clp protease [Rothia mucilaginosa ATCC 25296]
gi|283457916|ref|YP_003362518.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa
DY-18]
gi|255296352|gb|EET75692.1| Clp protease [Rothia mucilaginosa ATCC 25296]
gi|283133933|dbj|BAI64698.1| protease subunit of ATP-dependent Clp protease [Rothia mucilaginosa
DY-18]
Length = 217
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 89/181 (49%), Positives = 119/181 (65%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+ LLKERI+++ ++ D A LIC+Q+L L AE+P+ +I LYINSPGG VTAGMAIYD
Sbjct: 35 VYNSLLKERIIWLGSEVRDSNANLICSQMLLLSAEDPEADIYLYINSPGGSVTAGMAIYD 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I + T G AASMG LL+AG G R+A PNARIL+HQP GG G ASDI
Sbjct: 95 TMQLIPNDVVTVVTGMAASMGQFLLTAGTIGKRYATPNARILMHQPLGGIGGTASDIRTQ 154
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+RL EI + GK+ E + K DRD+ +A E ++G D + + + E
Sbjct: 155 AELILDMKKRLAEITAERTGKSLETILKDNDRDNWFNAEEGLEYGFFDHIATTAGKLPES 214
Query: 215 S 215
Sbjct: 215 K 215
>gi|15841985|ref|NP_337022.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis CDC1551]
gi|31793642|ref|NP_856135.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
AF2122/97]
gi|57116992|ref|YP_177883.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Rv]
gi|121638344|ref|YP_978568.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|148662296|ref|YP_001283819.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Ra]
gi|148823661|ref|YP_001288415.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis F11]
gi|167969785|ref|ZP_02552062.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis H37Ra]
gi|215404397|ref|ZP_03416578.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 02_1987]
gi|215412218|ref|ZP_03420980.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 94_M4241A]
gi|215427844|ref|ZP_03425763.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T92]
gi|215431407|ref|ZP_03429326.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis EAS054]
gi|215446707|ref|ZP_03433459.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T85]
gi|218754193|ref|ZP_03532989.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis GM 1503]
gi|219558458|ref|ZP_03537534.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T17]
gi|224990838|ref|YP_002645525.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253798460|ref|YP_003031461.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis KZN 1435]
gi|254232595|ref|ZP_04925922.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis C]
gi|254365237|ref|ZP_04981283.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis str.
Haarlem]
gi|254551509|ref|ZP_05141956.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis '98-R604 INH-RIF-EM']
gi|260201586|ref|ZP_05769077.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis T46]
gi|260205765|ref|ZP_05773256.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis K85]
gi|289443987|ref|ZP_06433731.1| clp protease [Mycobacterium tuberculosis T46]
gi|289553748|ref|ZP_06442958.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis KZN 605]
gi|289570616|ref|ZP_06450843.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis T17]
gi|289575155|ref|ZP_06455382.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis K85]
gi|289746243|ref|ZP_06505621.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
tuberculosis 02_1987]
gi|289751067|ref|ZP_06510445.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis T92]
gi|289754569|ref|ZP_06513947.1| Endopeptidase Clp 1 [Mycobacterium tuberculosis EAS054]
gi|289758593|ref|ZP_06517971.1| endopeptidase Clp 1 [Mycobacterium tuberculosis T85]
gi|289762630|ref|ZP_06522008.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis GM 1503]
gi|294994431|ref|ZP_06800122.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 210]
gi|297635067|ref|ZP_06952847.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN 4207]
gi|297732058|ref|ZP_06961176.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN R506]
gi|298525939|ref|ZP_07013348.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 94_M4241A]
gi|306776731|ref|ZP_07415068.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu001]
gi|306780504|ref|ZP_07418841.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu002]
gi|306785256|ref|ZP_07423578.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu003]
gi|306789615|ref|ZP_07427937.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu004]
gi|306793942|ref|ZP_07432244.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu005]
gi|306798336|ref|ZP_07436638.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu006]
gi|306804212|ref|ZP_07440880.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu008]
gi|306808782|ref|ZP_07445450.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu007]
gi|306968614|ref|ZP_07481275.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu009]
gi|306972841|ref|ZP_07485502.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu010]
gi|307080547|ref|ZP_07489717.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu011]
gi|313659394|ref|ZP_07816274.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis KZN V2475]
gi|61221190|sp|P0A526|CLPP1_MYCTU RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|61221191|sp|P0A527|CLPP1_MYCBO RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|90109123|pdb|2CE3|A Chain A, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109124|pdb|2CE3|B Chain B, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109125|pdb|2CE3|C Chain C, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109126|pdb|2CE3|D Chain D, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109127|pdb|2CE3|E Chain E, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109128|pdb|2CE3|F Chain F, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109129|pdb|2CE3|G Chain G, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109130|pdb|2CE3|H Chain H, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109131|pdb|2CE3|I Chain I, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109132|pdb|2CE3|J Chain J, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109133|pdb|2CE3|K Chain K, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109134|pdb|2CE3|L Chain L, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109135|pdb|2CE3|M Chain M, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|90109136|pdb|2CE3|N Chain N, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|13882259|gb|AAK46836.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mycobacterium
tuberculosis CDC1551]
gi|31619235|emb|CAD97349.1| PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 CLPP1
(ENDOPEPTIDASE CLP) [Mycobacterium bovis AF2122/97]
gi|41353706|emb|CAE55492.1| PROBABLE ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 1 CLPP1
(ENDOPEPTIDASE CLP) [Mycobacterium tuberculosis H37Rv]
gi|121493992|emb|CAL72469.1| Probable atp-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|124601654|gb|EAY60664.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis C]
gi|134150751|gb|EBA42796.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis str.
Haarlem]
gi|148506448|gb|ABQ74257.1| ATP-dependent Clp protease proteolytic subunit ClpP1 [Mycobacterium
tuberculosis H37Ra]
gi|148722188|gb|ABR06813.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis F11]
gi|224773951|dbj|BAH26757.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium bovis
BCG str. Tokyo 172]
gi|253319963|gb|ACT24566.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis KZN 1435]
gi|289416906|gb|EFD14146.1| clp protease [Mycobacterium tuberculosis T46]
gi|289438380|gb|EFD20873.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis KZN 605]
gi|289539586|gb|EFD44164.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis K85]
gi|289544370|gb|EFD48018.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis T17]
gi|289686771|gb|EFD54259.1| ATP-dependent Clp protease proteolytic subunit 1 [Mycobacterium
tuberculosis 02_1987]
gi|289691654|gb|EFD59083.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis T92]
gi|289695156|gb|EFD62585.1| Endopeptidase Clp 1 [Mycobacterium tuberculosis EAS054]
gi|289710136|gb|EFD74152.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
(endopeptidase clp) [Mycobacterium tuberculosis GM 1503]
gi|289714157|gb|EFD78169.1| endopeptidase Clp 1 [Mycobacterium tuberculosis T85]
gi|298495733|gb|EFI31027.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
tuberculosis 94_M4241A]
gi|308214891|gb|EFO74290.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu001]
gi|308326652|gb|EFP15503.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu002]
gi|308330078|gb|EFP18929.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu003]
gi|308333918|gb|EFP22769.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu004]
gi|308337721|gb|EFP26572.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu005]
gi|308341402|gb|EFP30253.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu006]
gi|308344888|gb|EFP33739.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu007]
gi|308349199|gb|EFP38050.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu008]
gi|308353820|gb|EFP42671.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu009]
gi|308357769|gb|EFP46620.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu010]
gi|308361714|gb|EFP50565.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu011]
gi|323718967|gb|EGB28117.1| ATP-dependent Clp protease proteolytic subunit 1 ClpP1
[Mycobacterium tuberculosis CDC1551A]
gi|326904075|gb|EGE51008.1| ATP-dependent Clp protease proteolytic subunit 1 ClpP1
[Mycobacterium tuberculosis W-148]
gi|328458228|gb|AEB03651.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis KZN 4207]
Length = 200
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 20 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 80 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+ E +E DRD +A+EA ++G VD ++
Sbjct: 140 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 192
>gi|18408572|ref|NP_564880.1| CLPP3; serine-type endopeptidase [Arabidopsis thaliana]
gi|75314059|sp|Q9SXJ6|CLPP3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 3,
chloroplastic; AltName: Full=Endopeptidase ClpP3;
Short=nClpP3; AltName: Full=nClpP4; Flags: Precursor
gi|12322291|gb|AAG51173.1|AC079285_6 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
gi|12597762|gb|AAG60075.1|AC013288_9 ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
gi|5360591|dbj|BAA82067.1| nClpP3 [Arabidopsis thaliana]
gi|21592949|gb|AAM64899.1| ATP-dependent Clp protease proteolytic subunit ClpP3 [Arabidopsis
thaliana]
gi|332196422|gb|AEE34543.1| ATP-dependent Clp protease proteolytic subunit 3 [Arabidopsis
thaliana]
Length = 309
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+AE+ +++I+L+INSPGG +TAGM
Sbjct: 83 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMG 142
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 143 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEM 202
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G++D V+
Sbjct: 203 SIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257
>gi|297703255|ref|XP_002828563.1| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like, partial [Pongo abelii]
Length = 301
Score = 180 bits (457), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/226 (37%), Positives = 124/226 (54%), Gaps = 17/226 (7%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
++ ++ L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL
Sbjct: 54 SQHETAARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFL 113
Query: 67 EAENPQKEISLYINSPGG----------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
++E+ +K I +YINSPG V G + + +K I F Q S+
Sbjct: 114 QSESNKKPIHMYINSPGEQGLSWVPGALVRAHGQKAFLVVARLKQDIGGFAQAQPTSLKP 173
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGG-------FSGQASDIERHAQDIVKIKRRLNEIY 169
S G P L P+ GQA+DI A++I+K+K++L IY
Sbjct: 174 EAQSPGRAAECHLQPPCEGLTLMPTFTPSLPLDVPQGQATDIAIQAEEIMKLKKQLYNIY 233
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
K+ +T + +E ++RD MS EA ++G++DKVL+ E
Sbjct: 234 AKHTKQTLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDE 279
>gi|289426380|ref|ZP_06428123.1| Clp protease [Propionibacterium acnes SK187]
gi|289153108|gb|EFD01826.1| Clp protease [Propionibacterium acnes SK187]
Length = 198
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 5 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 64
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 65 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 124
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA ++G++D V
Sbjct: 125 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLIDHV 184
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 185 YSNASQLRGDA 195
>gi|88192658|pdb|2CBY|A Chain A, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192659|pdb|2CBY|B Chain B, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192660|pdb|2CBY|C Chain C, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192661|pdb|2CBY|D Chain D, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192662|pdb|2CBY|E Chain E, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192663|pdb|2CBY|F Chain F, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
gi|88192664|pdb|2CBY|G Chain G, Crystal Structure Of The Atp-Dependent Clp Protease
Proteolytic Subunit 1 (Clpp1) From Mycobacterium
Tuberculosis
Length = 208
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 20 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 80 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+ E +E DRD +A+EA ++G VD ++
Sbjct: 140 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 192
>gi|13899067|gb|AAK48955.1|AF370528_1 ATP-dependent Clp protease; nClpP3 [Arabidopsis thaliana]
gi|18377550|gb|AAL66941.1| ATP-dependent Clp protease (nClpP3) [Arabidopsis thaliana]
Length = 309
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+AE+ +++I+L+INSPGG +TAGM
Sbjct: 83 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMG 142
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 143 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEM 202
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G++D V+
Sbjct: 203 SIRIREMMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVID 257
>gi|289428692|ref|ZP_06430375.1| Clp protease [Propionibacterium acnes J165]
gi|295131122|ref|YP_003581785.1| Clp protease [Propionibacterium acnes SK137]
gi|289158090|gb|EFD06310.1| Clp protease [Propionibacterium acnes J165]
gi|291375267|gb|ADD99121.1| Clp protease [Propionibacterium acnes SK137]
gi|313763508|gb|EFS34872.1| Clp protease [Propionibacterium acnes HL013PA1]
gi|313773445|gb|EFS39411.1| Clp protease [Propionibacterium acnes HL074PA1]
gi|313793897|gb|EFS41921.1| Clp protease [Propionibacterium acnes HL110PA1]
gi|313801288|gb|EFS42539.1| Clp protease [Propionibacterium acnes HL110PA2]
gi|313808033|gb|EFS46514.1| Clp protease [Propionibacterium acnes HL087PA2]
gi|313811498|gb|EFS49212.1| Clp protease [Propionibacterium acnes HL083PA1]
gi|313813442|gb|EFS51156.1| Clp protease [Propionibacterium acnes HL025PA1]
gi|313816690|gb|EFS54404.1| Clp protease [Propionibacterium acnes HL059PA1]
gi|313819599|gb|EFS57313.1| Clp protease [Propionibacterium acnes HL046PA2]
gi|313822076|gb|EFS59790.1| Clp protease [Propionibacterium acnes HL036PA1]
gi|313823690|gb|EFS61404.1| Clp protease [Propionibacterium acnes HL036PA2]
gi|313826014|gb|EFS63728.1| Clp protease [Propionibacterium acnes HL063PA1]
gi|313829483|gb|EFS67197.1| Clp protease [Propionibacterium acnes HL063PA2]
gi|313831239|gb|EFS68953.1| Clp protease [Propionibacterium acnes HL007PA1]
gi|313834851|gb|EFS72565.1| Clp protease [Propionibacterium acnes HL056PA1]
gi|313839989|gb|EFS77703.1| Clp protease [Propionibacterium acnes HL086PA1]
gi|314914807|gb|EFS78638.1| Clp protease [Propionibacterium acnes HL005PA4]
gi|314919377|gb|EFS83208.1| Clp protease [Propionibacterium acnes HL050PA1]
gi|314920715|gb|EFS84546.1| Clp protease [Propionibacterium acnes HL050PA3]
gi|314923825|gb|EFS87656.1| Clp protease [Propionibacterium acnes HL001PA1]
gi|314924726|gb|EFS88557.1| Clp protease [Propionibacterium acnes HL036PA3]
gi|314930595|gb|EFS94426.1| Clp protease [Propionibacterium acnes HL067PA1]
gi|314954450|gb|EFS98856.1| Clp protease [Propionibacterium acnes HL027PA1]
gi|314957523|gb|EFT01626.1| Clp protease [Propionibacterium acnes HL002PA1]
gi|314961995|gb|EFT06096.1| Clp protease [Propionibacterium acnes HL002PA2]
gi|314963748|gb|EFT07848.1| Clp protease [Propionibacterium acnes HL082PA1]
gi|314966160|gb|EFT10259.1| Clp protease [Propionibacterium acnes HL082PA2]
gi|314968425|gb|EFT12523.1| Clp protease [Propionibacterium acnes HL037PA1]
gi|314976595|gb|EFT20690.1| Clp protease [Propionibacterium acnes HL045PA1]
gi|314978950|gb|EFT23044.1| Clp protease [Propionibacterium acnes HL072PA2]
gi|314982025|gb|EFT26118.1| Clp protease [Propionibacterium acnes HL110PA3]
gi|314984414|gb|EFT28506.1| Clp protease [Propionibacterium acnes HL005PA1]
gi|314986607|gb|EFT30699.1| Clp protease [Propionibacterium acnes HL005PA2]
gi|314990964|gb|EFT35055.1| Clp protease [Propionibacterium acnes HL005PA3]
gi|315079596|gb|EFT51589.1| Clp protease [Propionibacterium acnes HL053PA2]
gi|315081175|gb|EFT53151.1| Clp protease [Propionibacterium acnes HL078PA1]
gi|315083637|gb|EFT55613.1| Clp protease [Propionibacterium acnes HL027PA2]
gi|315087057|gb|EFT59033.1| Clp protease [Propionibacterium acnes HL002PA3]
gi|315089232|gb|EFT61208.1| Clp protease [Propionibacterium acnes HL072PA1]
gi|315090839|gb|EFT62815.1| Clp protease [Propionibacterium acnes HL110PA4]
gi|315095051|gb|EFT67027.1| Clp protease [Propionibacterium acnes HL060PA1]
gi|315095254|gb|EFT67230.1| Clp protease [Propionibacterium acnes HL038PA1]
gi|315099136|gb|EFT71112.1| Clp protease [Propionibacterium acnes HL059PA2]
gi|315100381|gb|EFT72357.1| Clp protease [Propionibacterium acnes HL046PA1]
gi|315104284|gb|EFT76260.1| Clp protease [Propionibacterium acnes HL050PA2]
gi|315106804|gb|EFT78780.1| Clp protease [Propionibacterium acnes HL030PA1]
gi|315108933|gb|EFT80909.1| Clp protease [Propionibacterium acnes HL030PA2]
gi|327328170|gb|EGE69939.1| Clp protease [Propionibacterium acnes HL103PA1]
gi|327328483|gb|EGE70245.1| Clp protease [Propionibacterium acnes HL096PA2]
gi|327329651|gb|EGE71407.1| Clp protease [Propionibacterium acnes HL096PA3]
gi|327334166|gb|EGE75880.1| Clp protease [Propionibacterium acnes HL097PA1]
gi|327444270|gb|EGE90924.1| Clp protease [Propionibacterium acnes HL043PA2]
gi|327444850|gb|EGE91504.1| Clp protease [Propionibacterium acnes HL043PA1]
gi|327446336|gb|EGE92990.1| Clp protease [Propionibacterium acnes HL013PA2]
gi|327452076|gb|EGE98730.1| Clp protease [Propionibacterium acnes HL092PA1]
gi|327454887|gb|EGF01542.1| Clp protease [Propionibacterium acnes HL087PA3]
gi|327457828|gb|EGF04483.1| Clp protease [Propionibacterium acnes HL083PA2]
gi|328752325|gb|EGF65941.1| Clp protease [Propionibacterium acnes HL020PA1]
gi|328755280|gb|EGF68896.1| Clp protease [Propionibacterium acnes HL087PA1]
gi|328758239|gb|EGF71855.1| Clp protease [Propionibacterium acnes HL025PA2]
gi|328760012|gb|EGF73595.1| Clp protease [Propionibacterium acnes HL099PA1]
Length = 201
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 8 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 67
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 68 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 127
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA ++G++D V
Sbjct: 128 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLIDHV 187
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 188 YSNASQLRGDA 198
>gi|257068141|ref|YP_003154396.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium faecium DSM 4810]
gi|256558959|gb|ACU84806.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Brachybacterium faecium DSM 4810]
Length = 210
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 87/171 (50%), Positives = 121/171 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL+ERIV++ ++ D A IC++LL L AE+P K+I LYINSPGG +TAGMAIYD
Sbjct: 26 VYQRLLRERIVWLGSEVRDENANAICSKLLLLAAEDPDKDIYLYINSPGGSITAGMAIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+KP + T MG AASMG LLS+G KG R+A P+ R+L+HQP GG G A+DI+
Sbjct: 86 TMQFVKPDVVTVGMGMAASMGQFLLSSGTKGKRYATPHTRVLMHQPLGGLGGTATDIKIQ 145
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A I+ +KR L E+ + K+ E++ DRD +A+EA ++G +DK++
Sbjct: 146 ADLILSMKRTLAELIAEQTDKSVEQITADSDRDKWFTATEALEYGFIDKIV 196
>gi|308405118|ref|ZP_07494258.2| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu012]
gi|308365324|gb|EFP54175.1| ATP-dependent clp protease proteolytic subunit 1 clpP1
[Mycobacterium tuberculosis SUMu012]
Length = 197
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G+ E +E DRD +A+EA ++G VD ++
Sbjct: 137 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGFVDHIITR 189
>gi|111018526|ref|YP_701498.1| endopeptidase Clp subunit [Rhodococcus jostii RHA1]
gi|116243125|sp|Q0SGJ6|CLPP4_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|110818056|gb|ABG93340.1| endopeptidase Clp subunit [Rhodococcus jostii RHA1]
Length = 194
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 92/187 (49%), Positives = 135/187 (72%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P V+E+T GERS+DI+SRLL ERIVF+ +I+D +A ++ AQLL L+A++ +EI LY
Sbjct: 6 IPHVIERTPAGERSFDIFSRLLNERIVFLGTEIDDGVANVVMAQLLHLQADSSDQEIGLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG TA +AIYDTMQF++P I+T+CMGQAAS ++LL+AG KG R L ++R LLH
Sbjct: 66 INSPGGSTTAMLAIYDTMQFLRPTIATYCMGQAASAAAVLLAAGTKGHRHVLAHSRTLLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPS +G SD+ A +I++++ + I K+ G+T E + + DRD I +A EA ++
Sbjct: 126 QPSTQGNGTISDLALQAAEIMRVRSQTEAILSKHTGQTVERLRRDTDRDRIFTAEEAIEY 185
Query: 199 GVVDKVL 205
G+ D ++
Sbjct: 186 GLADTLV 192
>gi|182440084|ref|YP_001827803.1| putative ATP-dependent Clp protease [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|178468600|dbj|BAG23120.1| putative ATP-dependent Clp protease [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 201
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G R+ D YS+LL ERIVF+ I+D A+ + AQL++LE +P + +SL
Sbjct: 9 VLPEFTERTATGTRTLDPYSKLLSERIVFLGSPIDDIAASDLIAQLMYLEHADPDRPLSL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A A+YDTM+F+ + TFC+GQA S + LL+ G KG R ALP AR+++
Sbjct: 69 YINSPGGTFQAMAAVYDTMRFLTCEVETFCLGQAGSYAAALLAGGTKGRRHALPGARVVI 128
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP+ GQ SD+E HA+++V+ + + V++ G+T E++ ++RD I+ A A
Sbjct: 129 QQPAMEEPMRGQPSDLEIHARELVRTREMFAAMLVRDTGRTAEQITADIERDTILDAEAA 188
Query: 196 CDWGVVDKVLMSR 208
G+VD V+ +R
Sbjct: 189 LAHGLVDHVVANR 201
>gi|25028867|ref|NP_738921.1| ATP-dependent Clp protease proteolytic subunit [Corynebacterium
efficiens YS-314]
gi|259507929|ref|ZP_05750829.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium efficiens YS-314]
gi|67460557|sp|Q8FN37|CLPP1_COREF RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|23494154|dbj|BAC19121.1| putative endopeptidase Clp chain P2 [Corynebacterium efficiens
YS-314]
gi|259164424|gb|EEW48978.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium efficiens YS-314]
Length = 208
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/202 (41%), Positives = 133/202 (65%), Gaps = 3/202 (1%)
Query: 9 KDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
+ + ++P +EQ+ G + + Y++L +ERI+F+ Q++D A I AQLL LE
Sbjct: 6 QMPSSRY--VLPSFIEQSAYGTKETNPYAKLFEERIIFLGTQVDDTSANDIMAQLLVLEG 63
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+P ++I++YINSPGG TA MAIYDTMQ+++P + T C+GQAAS ++LL+AG G R
Sbjct: 64 MDPDRDITMYINSPGGSFTALMAIYDTMQYVRPDVQTVCLGQAASAAAVLLAAGAPGKRA 123
Query: 129 ALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
ALPNAR+L+HQP+ GQ SD+E A +I ++++ + ++ GKT E++ DRD
Sbjct: 124 ALPNARVLIHQPATQGTQGQVSDLEIQAAEIERMRKLMETTLSQHTGKTPEQIRIDTDRD 183
Query: 188 HIMSASEACDWGVVDKVLMSRI 209
I++A A ++G++D+V R
Sbjct: 184 KILTAEGALEYGIIDQVFDYRK 205
>gi|50843047|ref|YP_056274.1| ATP-dependent Clp protease proteolytic subunit 1 [Propionibacterium
acnes KPA171202]
gi|282854724|ref|ZP_06264059.1| Clp protease [Propionibacterium acnes J139]
gi|67460472|sp|Q6A7E9|CLPP2_PROAC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|50840649|gb|AAT83316.1| ATP-dependent Clp protease proteolytic subunit 1 [Propionibacterium
acnes KPA171202]
gi|282582306|gb|EFB87688.1| Clp protease [Propionibacterium acnes J139]
Length = 212
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 19 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 78
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 79 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 138
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA ++G++D V
Sbjct: 139 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLIDHV 198
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 199 YSNASQLRGDA 209
>gi|260780695|ref|YP_003227081.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
gi|260176773|gb|ACX33782.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
Length = 199
Score = 180 bits (456), Expect = 1e-43, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 128/192 (66%), Gaps = 5/192 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ +YINSPGG VT G+A+YD M +IK ++T C+G AASM S +L+ G +G R A P
Sbjct: 60 AKDLYIYINSPGGSVTCGIAVYDIMNYIKSDVTTICVGTAASMASFILAGGCRGKRIAFP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ ++++++I+R++ +IY + G+T + + +DRD +S
Sbjct: 120 HSRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGQIYAERTGQTLSRISRDMDRDQFLS 179
Query: 192 ASEACDWGVVDK 203
A EA +G+VD
Sbjct: 180 AQEAKKYGLVDH 191
>gi|308803947|ref|XP_003079286.1| COG0740: Protease subunit of ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
gi|116057741|emb|CAL53944.1| COG0740: Protease subunit of ATP-dependent Clp proteases (ISS)
[Ostreococcus tauri]
Length = 306
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/172 (50%), Positives = 119/172 (69%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D + LLK RIVF+ Q++D A + +QLL L+ ++P KEI L+INSPGG VTAGM IY
Sbjct: 85 DPFGALLKNRIVFLGHQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIY 144
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQF + P+ST C+G AASMG+ LL++GEKG R ++PNARI++HQP GG G A DIE
Sbjct: 145 DAMQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAVDIEI 204
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++I+ K LN + + G+ E +++ DRD MS EA +GV+D V+
Sbjct: 205 QAKEIMYHKANLNRLMAFHTGQKVETIDEDTDRDRYMSPLEAKQYGVIDIVI 256
>gi|314974115|gb|EFT18211.1| Clp protease [Propionibacterium acnes HL053PA1]
Length = 201
Score = 180 bits (456), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/191 (43%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 8 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 67
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 68 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 127
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA ++G++D V
Sbjct: 128 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALEYGLIDHV 187
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 188 YSNASQLRGDA 198
>gi|67460473|sp|Q6A7F0|CLPP1_PROAC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 216
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 77/192 (40%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+P E+T+ G R D Y++L ++RI+F+ + D +A + AQLL L++ + ++IS+
Sbjct: 24 YIPQWEERTSYGVRRVDPYTKLFEDRIIFLGTPVTDDIANAVMAQLLCLQSMDADRQISM 83
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG TA AIYDTM +++P I T C+G AAS ++LL+AG KG R +LPN+ +L+
Sbjct: 84 YINSPGGSFTAMTAIYDTMNYVRPDIQTICLGMAASAAAVLLAAGAKGQRLSLPNSTVLI 143
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
HQP+ GQA+DIE +I +I++ + + G++ E++ K +DRD ++A A
Sbjct: 144 HQPAMGQATYGQATDIEILDDEIQRIRKLMENMLATATGQSVEQISKDIDRDKYLTAQGA 203
Query: 196 CDWGVVDKVLMS 207
++G++D +L S
Sbjct: 204 KEYGLIDDILTS 215
>gi|318060402|ref|ZP_07979125.1| ATP-dependent Clp protease, protease subunit [Streptomyces sp.
SA3_actG]
gi|318078402|ref|ZP_07985734.1| ATP-dependent Clp protease, protease subunit [Streptomyces sp.
SA3_actF]
Length = 212
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YSRLL+ RIVF+ ++D A + QL+ LE +P ++ISL
Sbjct: 13 VLPEFTERTSYGTRTLDPYSRLLEGRIVFLGTPLDDTAAADLAVQLMHLEYADPDQDISL 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N PGG TA A+YDTM+ + ++T+C+GQA S+G++LL+AG G R ALP ARI+L
Sbjct: 73 YLNCPGGEFTALTAVYDTMRHLSCDVATYCLGQAVSVGAVLLAAGAPGKRAALPGARIVL 132
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP G GQ SD+ A+++ + +R + G+T EEV ++RD +++A EA
Sbjct: 133 RQPELPEGMRGQPSDLAVWAEELARERRTTERLLAAGTGRTEEEVRGDMERDLVLTAEEA 192
Query: 196 CDWGVVDKVLMSRI 209
+G+VD + R
Sbjct: 193 VTYGIVDALADRRA 206
>gi|6069464|dbj|BAA85451.1| S-locus protein 2 [Brassica rapa]
Length = 311
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+A++ +++I+L+INSPGG +TAGM
Sbjct: 85 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMG 144
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 145 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGSAGGKATEM 204
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G+VD V+
Sbjct: 205 SIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVID 259
>gi|323359780|ref|YP_004226176.1| protease subunit of ATP-dependent Clp protease [Microbacterium
testaceum StLB037]
gi|323276151|dbj|BAJ76296.1| protease subunit of ATP-dependent Clp protease [Microbacterium
testaceum StLB037]
Length = 194
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 92/180 (51%), Positives = 124/180 (68%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
+ ++ RLLK+RI+++ ++ D A ICA++L L AE+PQK+I LYINSPGG +TAGMA
Sbjct: 7 ATSVFDRLLKDRIIWLGSEVRDENANEICAKILLLAAEDPQKDIYLYINSPGGSITAGMA 66
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTMQF+ I T +G AASMG LLL++G KG R+ PNAR+LLHQP GGF G +SDI
Sbjct: 67 IYDTMQFVPNDIVTVGIGMAASMGQLLLTSGTKGKRYITPNARVLLHQPHGGFGGTSSDI 126
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ AQ I+ +KRRL EI GK+ E++ DRD +A EA ++G VD + D+
Sbjct: 127 QTQAQLILDMKRRLAEITASQTGKSVEQINADGDRDRWFTAQEALEYGFVDHMREHATDV 186
>gi|7657879|emb|CAB89185.1| ClpP [Brassica napus var. napus]
Length = 313
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+A++ +++I+L+INSPGG +TAGM
Sbjct: 87 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMG 146
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 147 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGSAGGKATEM 206
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G+VD V+
Sbjct: 207 SIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVID 261
>gi|15864561|emb|CAC80640.1| ClpP putative protein [Brassica napus]
Length = 313
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+A++ +++I+L+INSPGG +TAGM
Sbjct: 87 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMG 146
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 147 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGSAGGKATEM 206
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G+VD V+
Sbjct: 207 SIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVID 261
>gi|17028170|gb|AAL34333.1|L41144_1 ClpP [Brassica oleracea]
Length = 279
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+A++ +++I+L+INSPGG +TAGM
Sbjct: 53 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAQDSERDITLFINSPGGSITAGMG 112
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 113 IYDAMKQCKADVSTVCLGIAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGSAGGKATEM 172
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G+VD V+
Sbjct: 173 SIRVREMMYHKIKLNKIFSRITGKPESEIEGDTDRDYFLNPWEAKEYGLVDAVID 227
>gi|152968201|ref|YP_001363985.1| ATP-dependent Clp protease proteolytic subunit [Kineococcus
radiotolerans SRS30216]
gi|151362718|gb|ABS05721.1| Endopeptidase Clp [Kineococcus radiotolerans SRS30216]
Length = 240
Score = 179 bits (455), Expect = 2e-43, Method: Composition-based stats.
Identities = 85/193 (44%), Positives = 121/193 (62%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PM T G + RLL +RIV + +++D +A ICAQLL L A++P+ +I+LY+
Sbjct: 35 PMSTPTTTTGPFDDQLSQRLLFQRIVVLGQEVDDAVANRICAQLLLLSADDPRSDIALYV 94
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG ++AG+AIYDTM+ I +ST MG AASMG LL AG G R+ALP+AR+++HQ
Sbjct: 95 NSPGGSISAGLAIYDTMRLIPNDVSTLVMGMAASMGQFLLCAGTAGKRYALPHARVMMHQ 154
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
PSGG G A+DI A+++ K + + ++ G+ E VE RD +A EA +G
Sbjct: 155 PSGGIGGTAADIAIQAENLAHTKATMQRLIAEHTGQDVETVELDSQRDRWFTAEEALAYG 214
Query: 200 VVDKVLMSRIDIE 212
VVD V+ D+
Sbjct: 215 VVDHVVTGVSDVR 227
>gi|312891186|ref|ZP_07750708.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603]
gi|311296353|gb|EFQ73500.1| Endopeptidase Clp [Mucilaginibacter paludis DSM 18603]
Length = 230
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/189 (43%), Positives = 128/189 (67%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P + E+ D++SRL+ +RI+F+ ++D +A +I AQLLFL++ + +K+I
Sbjct: 38 SMTPYITEERQLNVAQMDVFSRLMMDRIIFLGEAVDDKIANIIQAQLLFLQSVDAKKDIQ 97
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LY+NSPGG V AG+ IYDTMQ I P ++T C+G A S G++LL AG G R AL ++R++
Sbjct: 98 LYVNSPGGSVYAGLGIYDTMQLIGPDVATICIGMALSFGAVLLCAGAAGKRAALKHSRVM 157
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG GQASDIE A+ ++ +K+ L I K+ + Y+ V DRD+ M+A+EA
Sbjct: 158 IHQPLGGVQGQASDIEITARQVLILKKELYNIISKHSKQDYQTVHDASDRDYWMTATEAK 217
Query: 197 DWGVVDKVL 205
+G++D++L
Sbjct: 218 AFGMIDEIL 226
>gi|297841293|ref|XP_002888528.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata]
gi|297334369|gb|EFH64787.1| hypothetical protein ARALYDRAFT_894344 [Arabidopsis lyrata subsp.
lyrata]
Length = 308
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 73/175 (41%), Positives = 123/175 (70%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ Q++D A L+ +QLL L+AE+ +++I+L+INSPGG +TAGM
Sbjct: 82 ELDTTNMLLRQRIVFLGSQVDDMTADLVISQLLLLDAEDSERDITLFINSPGGSITAGMG 141
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYD M+ K +ST C+G AASMG+ LL++G KG R+ +PN+++++HQP G G+A+++
Sbjct: 142 IYDAMKQCKADVSTVCLGLAASMGAFLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEM 201
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K +LN+I+ + GK E+E DRD+ ++ EA ++G++D V+
Sbjct: 202 SIRIREMMYHKIKLNKIFSRITGKPESEIEGDTDRDNFLNPWEAKEYGLIDAVID 256
>gi|291443095|ref|ZP_06582485.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
roseosporus NRRL 15998]
gi|291346042|gb|EFE72946.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
roseosporus NRRL 15998]
Length = 217
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G R+ D YS+LL ERIVF+ I+D A+ + AQL++LE +P + +SL
Sbjct: 25 VLPEFTERTATGTRTQDPYSKLLSERIVFLGSPIDDTAASDLIAQLMYLEHADPDRPVSL 84
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A A+YDTMQF+ + TFC+GQA S + LL+AG KG R ALP AR+++
Sbjct: 85 YINSPGGSFQAMAAVYDTMQFLTCEVETFCLGQAGSYAAALLAAGAKGRRHALPGARVVI 144
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP GQ SD+E HA+++V+ + + V++ G+T E++ ++RD I+ A A
Sbjct: 145 QQPALEEPMRGQPSDLEIHARELVRTREMFAAMLVRHTGRTAEQITADIERDTILDAKAA 204
Query: 196 CDWGVVDKVLMSR 208
G+VD V+ +R
Sbjct: 205 LAHGLVDHVVENR 217
>gi|224500839|ref|ZP_03669188.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes Finland 1988]
Length = 164
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 96/163 (58%), Positives = 127/163 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
++HQP GG GQA++IE A+ I+KIK R+N I + G+ YE
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQPYE 163
>gi|302524704|ref|ZP_07277046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
gi|302433599|gb|EFL05415.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
Length = 196
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 82/191 (42%), Positives = 129/191 (67%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VV ++ GER D+YS LL ERIV++ I+ +A + AQLLFLE++NP++EI+LY
Sbjct: 6 IPNVVTRSPGGERIMDVYSHLLSERIVYLGTAIDSGVANALIAQLLFLESDNPEQEINLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INS GG A +A+YDTM+FIK P++T C+GQA + G++LL+AG G R LP+AR++LH
Sbjct: 66 INSEGGDPAAMLALYDTMRFIKAPVATTCVGQAVATGAVLLAAGAAGRRSVLPHARVVLH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP+ G D+ A ++++++ +L EI ++ G E+ DRD + A+ A ++
Sbjct: 126 QPAAQGRGTIPDLILQADEVIRVRTQLEEITSRHTGHDVAELRHDTDRDRVFDAAGAVEY 185
Query: 199 GVVDKVLMSRI 209
G+ D+V+ +R
Sbjct: 186 GLADQVIEARP 196
>gi|224080315|ref|XP_002306094.1| predicted protein [Populus trichocarpa]
gi|118485273|gb|ABK94496.1| unknown [Populus trichocarpa]
gi|222849058|gb|EEE86605.1| predicted protein [Populus trichocarpa]
Length = 265
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + + +I
Sbjct: 77 PIMPAVM--TPGGP--MDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDEKTDIL 132
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LY+N PGG + +AIYD M +IKP + T C G AAS G+LLLS GEKGMR+A+PNARI+
Sbjct: 133 LYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLSGGEKGMRYAMPNARIM 192
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G D+ R + V+ + +++++Y G+ E+V++ +RD +S SEA
Sbjct: 193 IHQPQGGCGGHVEDVRRQVNEAVQARHKIDQMYATFTGQPLEKVQQYTERDRFLSTSEAM 252
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 253 EFGLIDGILET 263
>gi|242053033|ref|XP_002455662.1| hypothetical protein SORBIDRAFT_03g018270 [Sorghum bicolor]
gi|241927637|gb|EES00782.1| hypothetical protein SORBIDRAFT_03g018270 [Sorghum bicolor]
Length = 313
Score = 179 bits (454), Expect = 2e-43, Method: Composition-based stats.
Identities = 78/175 (44%), Positives = 121/175 (69%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D + LL++RIVF+ ++D A LI +QLL L+AE+ K+I L+INSPGG +TAGM
Sbjct: 74 ELDTSNMLLRQRIVFLGSSVDDTSADLIISQLLLLDAEDQTKDIKLFINSPGGSITAGMG 133
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+YD M+F K +ST C G AASMG+ LL+AG KG R+ +PNARI++HQPSGG G+ +++
Sbjct: 134 VYDAMKFCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARIMIHQPSGGAGGKVTEM 193
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++ K ++N+I + GK+ E++++ D+ MS EA D+G+VD ++
Sbjct: 194 GLQIREMMYEKIKINKIMSRITGKSKEQIDEDTKFDYFMSPWEAKDYGIVDSIID 248
>gi|329937608|ref|ZP_08287127.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
griseoaurantiacus M045]
gi|329303007|gb|EGG46895.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
griseoaurantiacus M045]
Length = 212
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 91/201 (45%), Positives = 128/201 (63%), Gaps = 1/201 (0%)
Query: 16 LGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L L P E R D + ++LL +RIVF+ Q+++ A ICAQLL L AE+P+ +
Sbjct: 5 LTLAPRAAEGDTPPSRFDDQLAAQLLNQRIVFLGTQVDEVSANRICAQLLLLSAEDPRTD 64
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG VTAG+AIYDTM+ I +ST MG AASMG LL+ G G R ALPNAR
Sbjct: 65 IGLYINSPGGSVTAGLAIYDTMRLIPNDVSTLVMGFAASMGQFLLTVGAPGKRLALPNAR 124
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQPS G G +DIE A+++ K+ + I ++ G++ E + + DRD +A +
Sbjct: 125 IMMHQPSAGIGGTTADIEIQAENLAFTKKAIERITAEHTGQSEETISRDGDRDRWFTAEQ 184
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A D+G+VD+V+ S D+ +
Sbjct: 185 ARDYGIVDRVVESLADVRPAA 205
>gi|302517758|ref|ZP_07270100.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
gi|302426653|gb|EFK98468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. SPB78]
Length = 212
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YSRLL+ RIVF+ ++D A + QL+ LE +P ++ISL
Sbjct: 13 VLPEFTERTSYGTRTLDPYSRLLEGRIVFLGTPLDDTAAADLAVQLMHLEYADPDQDISL 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N PGG TA A+YDTM+ + ++T+C+GQA S+G++LL+AG G R ALP ARI+L
Sbjct: 73 YLNCPGGEFTALTAVYDTMRHLSCDVATYCLGQAVSVGAVLLAAGAPGKRAALPGARIVL 132
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP G GQ SD+ A+++ + +R + G+T EEV ++RD +++A EA
Sbjct: 133 RQPELPEGVRGQPSDLAVWAEELARERRTTERLLAAGTGRTEEEVRGDMERDLVLTAEEA 192
Query: 196 CDWGVVDKVLMSRI 209
+G+VD + R
Sbjct: 193 VTYGIVDALADRRA 206
>gi|328880887|emb|CCA54126.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
venezuelae ATCC 10712]
Length = 207
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YS+LL+ RIVF+ I++ A + AQLL+L+ P ++I+L
Sbjct: 6 VLPAFTERTSYGTRTLDPYSKLLESRIVFLGTPIDETAANDVIAQLLYLDHAGPDQDIAL 65
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+A AIYDTM + + T C+GQA S ++LL+AG G R LP AR+ L
Sbjct: 66 YINSPGGSVSAMTAIYDTMGSLHCDLETTCLGQAMSTAAVLLAAGTPGKRMMLPGARVTL 125
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+P+ GQ SD++ A+++++++ + + + G+ E ++ LDR ++ A A
Sbjct: 126 QEPAMDEPLRGQPSDLDLQAREMLRLRALMAGMLTAHTGRDRERIDADLDRLTVLDAPAA 185
Query: 196 CDWGVVDKVLMSR 208
+G+VD V+ SR
Sbjct: 186 LAYGLVDHVITSR 198
>gi|297153500|gb|ADI03212.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
bingchenggensis BCW-1]
Length = 212
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 87/177 (49%), Positives = 120/177 (67%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIV + Q++D A +CAQLL L AE+P+ +ISLYINSPGG VTAG+AIYDTM+
Sbjct: 29 LLAQRIVLLGTQVDDVSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLAIYDTMRL 88
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LL+ G G RFALPNARI++HQPS G G A+DIE A+++
Sbjct: 89 IPNDVSTLAMGFAASMGQFLLTVGTPGKRFALPNARIMMHQPSAGIGGTAADIEIQAENL 148
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
K + I ++ G++ E + + DRD +A +A ++G+VD+V+ S DI +
Sbjct: 149 QFTKEAIERITAEHTGQSEETIARDGDRDRWFTAEQAREYGIVDRVVESVADIRPAA 205
>gi|227542941|ref|ZP_03972990.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51866]
gi|227181163|gb|EEI62135.1| endopeptidase Clp [Corynebacterium glucuronolyticum ATCC 51866]
Length = 207
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 85/204 (41%), Positives = 137/204 (67%), Gaps = 3/204 (1%)
Query: 7 AKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL 66
+ + + ++P VE ++ G + + Y++L +ERI+F+ Q++D A I AQLL L
Sbjct: 3 MQNMPQARY--ILPSFVEHSSYGAKESNPYNKLFEERIIFLGAQVDDTSANDIMAQLLVL 60
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +P ++I++YINSPGG T+ MAIYDTMQ+++P + T C+GQAAS ++LL+AG KG
Sbjct: 61 EGLDPDRDITMYINSPGGSFTSLMAIYDTMQYVRPDVRTVCLGQAASAAAVLLAAGAKGK 120
Query: 127 RFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ALPNAR+L+HQP+ GQ SD+E A++I ++++ + + + G+T E+V D
Sbjct: 121 RAALPNARVLIHQPATQGTQGQVSDLEIQAREIERMRKLMEDTLAHHTGQTSEQVRIDTD 180
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD I++A EA ++G++D+V R
Sbjct: 181 RDKILTAPEAVEYGLIDEVFDYRK 204
>gi|255537123|ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223549527|gb|EEF51015.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 279
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 3/195 (1%)
Query: 14 VFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V +T + D+++ L +ER++F+ I++ + I A +L+L+ +
Sbjct: 66 RMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDTID 125
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K I YIN PGG +T +AIYDTMQ +K P+ T C+G A ++ +L+AGEKG R A+
Sbjct: 126 DNKRIYFYINGPGGDLTPTLAIYDTMQSLKSPVGTHCVGFAYNLAGFILAAGEKGNRSAM 185
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI A ++++IK L K G+ E++ K L R
Sbjct: 186 PLSRIALQSPAGAARGQADDIRNEANELLRIKDYLYNELAKKTGQPAEKINKDLSRMKRF 245
Query: 191 SASEACDWGVVDKVL 205
+A EA D+G++D+++
Sbjct: 246 NAQEALDYGLIDRII 260
>gi|330465579|ref|YP_004403322.1| endopeptidase Clp [Verrucosispora maris AB-18-032]
gi|328808550|gb|AEB42722.1| endopeptidase Clp [Verrucosispora maris AB-18-032]
Length = 195
Score = 179 bits (453), Expect = 3e-43, Method: Composition-based stats.
Identities = 84/186 (45%), Positives = 125/186 (67%), Gaps = 2/186 (1%)
Query: 29 GERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
G+R++ ++ RLL+ERIVF+ ++ D A I AQ+L L AE+ ++I LYINSPGG V
Sbjct: 8 GQRTFGDQVFERLLRERIVFLGSEVTDEAANRITAQILLLAAEDSTRDIRLYINSPGGSV 67
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
+AGMA+YDTM+F+ +ST +G A SMG LL AG G R+ALP+ RIL+HQPSGG G
Sbjct: 68 SAGMAVYDTMRFVPNDVSTLALGLAGSMGQFLLCAGTAGKRYALPHTRILMHQPSGGMGG 127
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
ASDI A++++ +KR + E+ ++ G+ E+++ DRD +A +A +G++D VL
Sbjct: 128 TASDITIQAENMLHVKRTMQELIARHSGRDLTEIQQDWDRDRWFTAEQARTYGLIDHVLT 187
Query: 207 SRIDIE 212
+ I
Sbjct: 188 TTTQIP 193
>gi|297563812|ref|YP_003682785.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|296848261|gb|ADH70279.1| Endopeptidase Clp [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 219
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 125/191 (65%), Gaps = 4/191 (2%)
Query: 24 EQTNRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
++T+ G ++D + +RLL+ RIV + Q+++ A +CAQ+L L E+P+++I+L +NS
Sbjct: 9 DETSGG--AFDDQLATRLLRSRIVLLGTQVDEASANRVCAQILLLADEDPRRDITLAVNS 66
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG V+AG+AIYD M F+ +ST MG AASMG L G G R++LP+ARI++HQPS
Sbjct: 67 PGGSVSAGLAIYDVMNFVPNDVSTLVMGFAASMGQFLACVGTPGKRYSLPHARIMMHQPS 126
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GG G A+DI A+++ K+ + + K+ G+T E + + RD +A EA ++G V
Sbjct: 127 GGLGGTAADIAIQAENLAHTKQTMVRLIAKHTGQTEETISRDQHRDAWFTAQEAREYGFV 186
Query: 202 DKVLMSRIDIE 212
D V+ S +++
Sbjct: 187 DHVVASVAEMD 197
>gi|311113766|ref|YP_003984988.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa
ATCC 17931]
gi|310945260|gb|ADP41554.1| ATP-dependent Clp protease proteolytic subunit [Rothia dentocariosa
ATCC 17931]
Length = 195
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 89/170 (52%), Positives = 117/170 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+++ ++ D A LIC+Q+L L AE+P+ +I LYINSPGG VTAGMAIYD
Sbjct: 13 VYNRLLKERIIWLGSEVRDSNANLICSQMLLLSAEDPEADIYLYINSPGGSVTAGMAIYD 72
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I + T G AASMG LL+AG G R+A PNARIL+HQP GG G ASDI
Sbjct: 73 TMQLIPNDVVTVVTGMAASMGQFLLTAGAMGKRYATPNARILMHQPLGGIGGTASDIRTQ 132
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K+RL EI + GK+ E + K DRD+ +A E ++G D +
Sbjct: 133 AELILDMKKRLAEITAERTGKSLETILKDNDRDNWFTAEEGLEYGFFDHI 182
>gi|3834445|gb|AAC70947.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
coelicolor A3(2)]
Length = 218
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 93/190 (48%), Positives = 129/190 (67%), Gaps = 3/190 (1%)
Query: 17 GLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
L+P + + G D +Y+RLL ERI+F+ ++D +A I AQLL L + +P K+I
Sbjct: 17 NLMPSAAGEPSIGGGLGDQVYNRLLGERIIFLGQPVDDDIANKITAQLLLLAS-DPDKDI 75
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG +TAGMAIYDTMQ+IK + T MG AASMG LLSAG +FALPNA I
Sbjct: 76 FLYINSPGGSITAGMAIYDTMQYIKNDVVTIAMGLAASMGQFLLSAGTP-RQFALPNAEI 134
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
L+HQPS G +G ASDI+ HA+ ++ KRR+ E+ ++ G+T E++ + DRD A EA
Sbjct: 135 LIHQPSAGLAGSASDIKIHAERLLHTKRRMAELTSQHTGQTIEQITRDSDRDRWFDAFEA 194
Query: 196 CDWGVVDKVL 205
++G++D V+
Sbjct: 195 KEYGLIDDVI 204
>gi|254821428|ref|ZP_05226429.1| ATP-dependent Clp protease proteolytic subunit [Mycobacterium
intracellulare ATCC 13950]
Length = 199
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 117/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 17 VYERLLSERIIFLGSEVSDEIANRLCAQILLLAAEDSTKDISLYINSPGGSISAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 77 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ IK+ + + + G++ E +E DRD +A EA ++G VD ++
Sbjct: 137 AEQFHVIKKEMFRLNAEFTGQSIERIEADSDRDRWFTAQEALEYGFVDHIITR 189
>gi|331268128|ref|YP_004347777.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
gi|325296305|gb|ADZ05025.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
Length = 201
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 131/193 (67%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ +++D +A + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQ 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K + +YINSPGG VT G+A+YD M +IK ++T C+G AASM S +L+ G++G R ALP
Sbjct: 60 NKGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
++RI++HQP GG GQAS++ ++++++I+R++ IY + G+ + + +DRD +S
Sbjct: 120 HSRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYSERTGQALSRISRDMDRDQFLS 179
Query: 192 ASEACDWGVVDKV 204
A EA D+G+VD+V
Sbjct: 180 AREAKDYGLVDQV 192
>gi|149178550|ref|ZP_01857137.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
gi|148842568|gb|EDL56944.1| ATP-dependent clp protease proteolytic subunit [Planctomyces maris
DSM 8797]
Length = 208
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 83/207 (40%), Positives = 133/207 (64%), Gaps = 3/207 (1%)
Query: 12 EDVFLGLVPMVVEQTNRG---ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
D G +P Q R +R I LL RI+F+ I D A LI +LL+L++
Sbjct: 2 FDPLSGQMPTQANQRARSYSQQRQMGIGDLLLDNRIIFLDSVINDASANLIVMKLLYLQS 61
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
EN ++I+LY+NSPGG VT+ MAIYDTMQFI+ ++T+C+G AAS G++L++ G+KG R+
Sbjct: 62 ENRHQDINLYVNSPGGSVTSTMAIYDTMQFIECDVATYCVGLAASGGAILVAGGQKGKRY 121
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
LP+A++++HQP G GQ SDIE A+DI+ + LN+I + G++ E++ RD
Sbjct: 122 ILPHAKMMIHQPYGEVGGQVSDIEIQAKDILDTREVLNQILANHTGQSIEQIALDTSRDR 181
Query: 189 IMSASEACDWGVVDKVLMSRIDIEEKS 215
++A ++ ++G+VD++L+ ++K
Sbjct: 182 FLTAPQSVEYGLVDELLVRDKKDKDKE 208
>gi|302753844|ref|XP_002960346.1| hypothetical protein SELMODRAFT_71251 [Selaginella moellendorffii]
gi|302767898|ref|XP_002967369.1| hypothetical protein SELMODRAFT_71370 [Selaginella moellendorffii]
gi|300165360|gb|EFJ31968.1| hypothetical protein SELMODRAFT_71370 [Selaginella moellendorffii]
gi|300171285|gb|EFJ37885.1| hypothetical protein SELMODRAFT_71251 [Selaginella moellendorffii]
Length = 214
Score = 178 bits (452), Expect = 4e-43, Method: Composition-based stats.
Identities = 80/168 (47%), Positives = 120/168 (71%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL++RIVF+ Q++D A LI +QLL L+A++P K+I ++INSPGG V+AGM IYD M+
Sbjct: 7 LLQQRIVFLGSQVDDVSADLIISQLLLLDAKDPTKDIKMFINSPGGSVSAGMGIYDAMKL 66
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ +ST C G AASMG+ LL++G KG R+ +PNAR+++HQP GG G A D+ +++
Sbjct: 67 CRADVSTICFGLAASMGAFLLASGTKGKRYCMPNARVMIHQPLGGAGGVAIDVGIQVREM 126
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ K +LN+I + GK+ E++E DRD+ M+A EA D+G+VD V+
Sbjct: 127 MYHKAKLNKILSRLTGKSEEQIEADTDRDYFMNAWEAVDYGLVDGVID 174
>gi|302404698|ref|XP_003000186.1| ATP-dependent Clp protease proteolytic subunit [Verticillium
albo-atrum VaMs.102]
gi|261360843|gb|EEY23271.1| ATP-dependent Clp protease proteolytic subunit [Verticillium
albo-atrum VaMs.102]
Length = 238
Score = 178 bits (452), Expect = 5e-43, Method: Composition-based stats.
Identities = 90/190 (47%), Positives = 135/190 (71%), Gaps = 7/190 (3%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
DI+S+LL+ERI+ + G I+D ++ I AQLL+LE++NP K I+LYINSPGG VT+G+AIY
Sbjct: 41 DIFSKLLQERIICLNGAIDDTVSASIVAQLLWLESDNPDKAITLYINSPGGSVTSGLAIY 100
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM +IK P+ST C+G A+SMG+LLL+ GE G R+ALP++ +++HQP GG GQASDI
Sbjct: 101 DTMTYIKSPVSTVCLGAASSMGALLLTGGEAGKRYALPHSSVMIHQPLGGTQGQASDILI 160
Query: 154 HAQDIVKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+A I +++ +LNEI ++ + EV ++RD ++ EA + GV+D++L
Sbjct: 161 YAHQIQRVRTKLNEIMRRHLNAAFGRDRYSLAEVNDMMERDKYLTPEEAKEMGVIDEILT 220
Query: 207 SRIDIEEKSK 216
R + +EK +
Sbjct: 221 RRTEKDEKER 230
>gi|225428533|ref|XP_002284510.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297741435|emb|CBI32566.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 74/191 (38%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G D+ + L + RI+F+ I +A + +QL+ L A + +I
Sbjct: 81 PVAPSVM--TPGGP--LDLSTVLFRSRIIFIGQPINSMVAQRVISQLVTLAAIDEDADIL 136
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 137 MYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIM 196
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G D+ R + V+ + +++++Y G+ E+V++ +RD +SASEA
Sbjct: 197 VHQPQGGCGGHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEQVQQYTERDRFLSASEAM 256
Query: 197 DWGVVDKVLMS 207
++G +D +L +
Sbjct: 257 EFGFIDGILET 267
>gi|168013186|ref|XP_001759282.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689595|gb|EDQ75966.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 205
Score = 178 bits (451), Expect = 5e-43, Method: Composition-based stats.
Identities = 80/173 (46%), Positives = 118/173 (68%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D + LL++RI+F+ Q++D A +I +QLL L+A++P K+I L+INSPGG VTAGM I
Sbjct: 4 LDPATMLLQQRILFLGSQVDDFSADVIISQLLLLDAQDPTKDIKLFINSPGGSVTAGMGI 63
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD M+ K +ST C G AASMG+ LL+AG KG R+ +PNAR+++HQP GG G A D
Sbjct: 64 YDAMKLCKADVSTVCFGLAASMGAFLLAAGTKGKRYCMPNARVMIHQPLGGAGGTAIDGA 123
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++++ K +L +I + G+ +VE DRD+ M+A EA ++G+VD V+
Sbjct: 124 LQVREMMYHKYKLQKIMSRLTGQPEAKVEADTDRDNFMNAWEAKEYGLVDGVI 176
>gi|239978196|ref|ZP_04700720.1| ATP-dependent Clp protease [Streptomyces albus J1074]
gi|291450088|ref|ZP_06589478.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
albus J1074]
gi|291353037|gb|EFE79939.1| ATP-dependent Clp protease proteolytic subunit 5 [Streptomyces
albus J1074]
Length = 212
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P E+T++G R+ D YS+L ERIVF+ +++ + + AQ L LE +P ++I LY
Sbjct: 14 LPEFTERTSQGSRTQDPYSKLFSERIVFLGRPVDEAGVSDVMAQFLHLEHADPDRDIQLY 73
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +A A+YDT+Q++ ++T C+GQA S ++LL+AG G R LP +R ++
Sbjct: 74 INSPGGSFSAMTALYDTLQYVSCDVATTCLGQANSAAAVLLAAGAPGKRLMLPGSRAVIR 133
Query: 139 QP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
QP + GQ SD+ A ++++++ L E+ ++ G+ + + + ++RD + A +A
Sbjct: 134 QPALADPVQGQVSDLAIEAAELLRMRALLVELLARHTGRDRDRIAQDIERDLHLDARQAV 193
Query: 197 DWGVVDKVLMSRI 209
++G+ D ++ SR
Sbjct: 194 EYGLADHLVGSRK 206
>gi|239939670|ref|ZP_04691607.1| putative ATP-dependent Clp protease [Streptomyces roseosporus NRRL
15998]
gi|239986153|ref|ZP_04706817.1| putative ATP-dependent Clp protease [Streptomyces roseosporus NRRL
11379]
Length = 201
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G R+ D YS+LL ERIVF+ I+D A+ + AQL++LE +P + +SL
Sbjct: 9 VLPEFTERTATGTRTQDPYSKLLSERIVFLGSPIDDTAASDLIAQLMYLEHADPDRPVSL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A A+YDTMQF+ + TFC+GQA S + LL+AG KG R ALP AR+++
Sbjct: 69 YINSPGGSFQAMAAVYDTMQFLTCEVETFCLGQAGSYAAALLAAGAKGRRHALPGARVVI 128
Query: 138 HQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP GQ SD+E HA+++V+ + + V++ G+T E++ ++RD I+ A A
Sbjct: 129 QQPALEEPMRGQPSDLEIHARELVRTREMFAAMLVRHTGRTAEQITADIERDTILDAKAA 188
Query: 196 CDWGVVDKVLMSR 208
G+VD V+ +R
Sbjct: 189 LAHGLVDHVVENR 201
>gi|326780753|ref|ZP_08240018.1| Endopeptidase Clp [Streptomyces cf. griseus XylebKG-1]
gi|326661086|gb|EGE45932.1| Endopeptidase Clp [Streptomyces cf. griseus XylebKG-1]
Length = 201
Score = 178 bits (451), Expect = 6e-43, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G R+ D YS+LL ERI+F+ I+D A+ + AQL++LE +P + +SL
Sbjct: 9 VLPEFTERTATGTRTLDPYSKLLSERIIFLGSPIDDIAASDLIAQLMYLEHADPDRTLSL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A A+YDTM+F+ + TFC+GQA S + LL+ G KG R ALP AR+++
Sbjct: 69 YINSPGGTFQAMAAVYDTMRFLTCEVETFCLGQAGSYATALLAGGTKGRRHALPGARVVI 128
Query: 138 HQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP+ GQ SD+E HA+++V+ + + V++ G+T E++ ++RD I+ A A
Sbjct: 129 QQPAMEEPMRGQPSDLEIHARELVRTREMFAAMLVRDTGRTAEQITADIERDTILDAEAA 188
Query: 196 CDWGVVDKVLMSR 208
G+VD V+ +R
Sbjct: 189 LAHGLVDHVVANR 201
>gi|239932976|ref|ZP_04689929.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
ghanaensis ATCC 14672]
gi|291441329|ref|ZP_06580719.1| ATP-dependent Clp protease proteolytic subunit 3 [Streptomyces
ghanaensis ATCC 14672]
gi|291344224|gb|EFE71180.1| ATP-dependent Clp protease proteolytic subunit 3 [Streptomyces
ghanaensis ATCC 14672]
Length = 218
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 88/186 (47%), Positives = 123/186 (66%), Gaps = 1/186 (0%)
Query: 31 RSYDI-YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
R D+ RLL +RIV + Q+++ A +CAQLL L AE+P+ +ISLY+NSPGG V AG
Sbjct: 25 RFDDLLADRLLAQRIVLLGTQVDEVSANRVCAQLLILSAEDPRTDISLYVNSPGGSVHAG 84
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+AIYDTM+ I +ST MG AASMG LLS G G R+ALPNARI++HQPS G G +
Sbjct: 85 LAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTAGKRYALPNARIMMHQPSAGIGGTTA 144
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE A+++ KR + I ++ G++ E V + DRD +A EA ++G+VD+V+ S
Sbjct: 145 DIEIQAENLEFTKRTIERITAEHTGQSPETVSRDGDRDRWFTAEEAREYGMVDRVVESLA 204
Query: 210 DIEEKS 215
D+ +
Sbjct: 205 DVRPAA 210
>gi|220912907|ref|YP_002488216.1| endopeptidase Clp [Arthrobacter chlorophenolicus A6]
gi|219859785|gb|ACL40127.1| Endopeptidase Clp [Arthrobacter chlorophenolicus A6]
Length = 206
Score = 177 bits (450), Expect = 6e-43, Method: Composition-based stats.
Identities = 93/170 (54%), Positives = 121/170 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY+RLLKERI+++ ++ D A IC+QLL L AENP+K+I LYINSPGG VTAGMAIYD
Sbjct: 13 IYNRLLKERIIWLGSEVRDDNANAICSQLLLLSAENPEKDIYLYINSPGGSVTAGMAIYD 72
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQFI + T G AASMG LLS+G KG R+A PNAR+L+HQPSGG G ASDI+
Sbjct: 73 TMQFIPNDVVTVATGLAASMGQFLLSSGTKGKRYATPNARVLMHQPSGGIGGTASDIKIQ 132
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K+ + E+ G+T E + K DRD +A+EA ++G DK+
Sbjct: 133 AELILHMKKVMAELTADQTGQTVETILKDNDRDKWFTAAEALEYGFFDKI 182
>gi|302542936|ref|ZP_07295278.1| Clp protease [Streptomyces hygroscopicus ATCC 53653]
gi|302460554|gb|EFL23647.1| Clp protease [Streptomyces himastatinicus ATCC 53653]
Length = 217
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 118/174 (67%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIVF+ Q+++ A +CAQLL L AE+P+ +ISLYINSPGG VTAG+AIYDTM+
Sbjct: 34 LLTQRIVFLGTQVDEVSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLAIYDTMRL 93
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I ++T MG AASMG LL+ G G R+ALPNARI++HQPS G G +DI A+++
Sbjct: 94 IPNDVATLAMGFAASMGQFLLTVGTAGKRYALPNARIMMHQPSAGIGGTTADIAIQAENL 153
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
K+ + I ++ G+T E + + DRD +A +A ++G+VD ++ S D+
Sbjct: 154 EFTKKAIERITAEHTGQTQETISRDGDRDRWFTAEQAKEYGMVDSIVESLSDVR 207
>gi|11466349|ref|NP_038352.1| ATP-dependent Clp protease proteolytic subunit [Mesostigma viride]
gi|12229759|sp|Q9MUV8|CLPP_MESVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7259492|gb|AAF43793.1|AF166114_5 proteolytic subunit 2 of clp protease [Mesostigma viride]
Length = 229
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 68/204 (33%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + S D+Y+RL +ERI+F+ ++D +A + ++FL +E+
Sbjct: 1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I YINSPGG + AG+ +YD +Q + ++T CMG AASM S +L+ G G R P+
Sbjct: 61 KGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR++LHQP GG G+A + + ++ +++ + +YVK G++ E++ K ++RD+ M
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRP 180
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
+A ++G++D ++ + +++E K
Sbjct: 181 RQAKEYGLIDHMVTNVNELDELDK 204
>gi|288921296|ref|ZP_06415579.1| Endopeptidase Clp [Frankia sp. EUN1f]
gi|288347327|gb|EFC81621.1| Endopeptidase Clp [Frankia sp. EUN1f]
Length = 275
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 81/179 (45%), Positives = 118/179 (65%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL RIVF+ +ED MA ICA+LL L A++P +I LYINSPGG V+AGMAIYD
Sbjct: 49 VFQRLLANRIVFLGSAVEDAMANAICAKLLLLAADDPTADIYLYINSPGGSVSAGMAIYD 108
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ++ ++T +G A SM +LL+AG G R+ALP +++L+HQPSGG G +SDI
Sbjct: 109 TMQYVSNDVATVALGLAGSMAQVLLTAGAPGKRYALPRSQVLMHQPSGGIGGGSSDIAIQ 168
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
A ++ KR L ++ + G+ E +E DRD +A +A ++G+VD VL ++ +
Sbjct: 169 ATQMLATKRLLQQLIALHSGQPVERIEADADRDRWFTAEQAREYGLVDHVLHRAGELTD 227
>gi|302549126|ref|ZP_07301468.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
gi|302466744|gb|EFL29837.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
viridochromogenes DSM 40736]
Length = 219
Score = 177 bits (450), Expect = 7e-43, Method: Composition-based stats.
Identities = 89/212 (41%), Positives = 126/212 (59%), Gaps = 1/212 (0%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLL 64
+ + L P E R D + ++LL +RIV + Q+++ A +CAQLL
Sbjct: 2 PRRGEPMTPLTTLTPRAEEGDTPPTRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLL 61
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L AE+P+ +ISLYINSPGG V AG+AIYDTMQ I +ST MG AASMG LL G
Sbjct: 62 ILSAEDPRTDISLYINSPGGSVHAGLAIYDTMQLIPNDVSTLAMGFAASMGQFLLCVGAP 121
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R+ALPNARI++HQ S G G +DIE A+++ KR + + ++ G + + +
Sbjct: 122 GKRYALPNARIMMHQGSAGIGGTTADIEIQAENLEHTKRTMERLIAEHTGHCAQTISRDG 181
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
DRD +A EA D+G+VD+V+ S DI ++
Sbjct: 182 DRDRWFTAEEARDYGIVDQVVESLADIRPTAQ 213
>gi|224103437|ref|XP_002313056.1| predicted protein [Populus trichocarpa]
gi|222849464|gb|EEE87011.1| predicted protein [Populus trichocarpa]
Length = 246
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + +I
Sbjct: 58 PIMPAVM--TPGGP--LDLSSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDENADIL 113
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 114 MYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIM 173
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G D+ R + V+ + +++++Y G+ E+V++ +RD +S SEA
Sbjct: 174 IHQPQGGCGGHVEDVRRQVNEAVQARHKIDQMYAVFTGQPLEKVQQYTERDRFLSTSEAM 233
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 234 EFGLIDGILET 244
>gi|255018646|ref|ZP_05290772.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL F2-515]
Length = 161
Score = 177 bits (449), Expect = 8e-43, Method: Composition-based stats.
Identities = 94/161 (58%), Positives = 125/161 (77%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++HQP GG GQA++IE A+ I+KIK R+N I + G+
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQP 161
>gi|311900309|dbj|BAJ32717.1| putative ATP-dependent Clp protease proteolytic subunit
[Kitasatospora setae KM-6054]
Length = 212
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 89/177 (50%), Positives = 119/177 (67%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL RIV + Q++D A +CAQLL L AE+P+ +ISLYINSPGG VTAG+AIYDTM+
Sbjct: 29 LLARRIVLLGTQVDDVSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLAIYDTMRL 88
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LL+ G G RFALPNARI++HQPS G G ASDIE A+++
Sbjct: 89 IPNDVSTLAMGFAASMGQFLLTVGAPGKRFALPNARIMMHQPSAGIGGTASDIEIQAENL 148
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
KR + I + G++ E + + DRD +A +A ++G+VD+VL S ++ S
Sbjct: 149 EYTKRAIERITAAHTGQSEETIARDGDRDRWFTAEQAREYGMVDRVLESLAEVGSAS 205
>gi|327348449|gb|EGE77306.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
dermatitidis ATCC 18188]
Length = 222
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 95/174 (54%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P V E G +YDI+SRLLKERIV + G++++ ++ I AQLLFLEA+NP+K I LY
Sbjct: 37 TPFVTETVGGGWHTYDIFSRLLKERIVCLNGEVDETLSASIVAQLLFLEADNPEKPIHLY 96
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG VTAG+A+YDTM +I P+ST C+GQAASMGSLLL G G R+ LP++ +++H
Sbjct: 97 INSPGGSVTAGLAVYDTMTYISAPVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVH 156
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIM 190
QPSGG+ GQA+DI HA++I++++R+LNEIY + K + +E+EK ++RD+ M
Sbjct: 157 QPSGGYFGQATDIAIHAKEILRVRRQLNEIYKLHLTKEMSLDEIEKWMERDYFM 210
>gi|224178037|ref|YP_002600892.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
gi|215882704|gb|ACJ71077.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
Length = 198
Score = 177 bits (449), Expect = 9e-43, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 130/198 (65%), Gaps = 5/198 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +L+L AE+
Sbjct: 1 MPIGVPKVAYRLP-GEPAPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMLYLSAEDE 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K + +YINSPGG VT G+A+YD MQ + ++T C+G AASM S +L+ GE+G R AL
Sbjct: 60 SKRLYIYINSPGGSVTCGIAVYDAMQHVNASVTTICVGIAASMASFVLAGGERGHRLALS 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ARI++HQP GG GQAS++ A+++++I+R++ +IY + G+ + + +DRD MS
Sbjct: 120 HARIMIHQPQGGSQGQASEVTAEAEEVMRIRRQVGQIYAERTGQRLTTIARDMDRDRFMS 179
Query: 192 ASEACDWGVVDKVLMSRI 209
EA ++G+VD+V +
Sbjct: 180 GREAKEYGLVDQVAQQKA 197
>gi|255556085|ref|XP_002519077.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223541740|gb|EEF43288.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 277
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + +I
Sbjct: 89 PIMPAVM--TPGGP--LDLQSVLFRNRIIFIGQPINSQVAQRVISQLVTLATIDENSDIL 144
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 145 MYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIM 204
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G D+ R + V+ + +++ +Y G+ E+V++ +RD +S SEA
Sbjct: 205 IHQPQGGCGGHVEDVRRQVNEAVQSRHKVDRMYAAFTGQPLEKVQQYTERDRFLSTSEAM 264
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 265 EFGLIDGILET 275
>gi|145347023|ref|XP_001417979.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144578207|gb|ABO96272.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 177 bits (449), Expect = 1e-42, Method: Composition-based stats.
Identities = 84/171 (49%), Positives = 118/171 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ LL+ RIVF+ Q++D A + +QLL L+ ++P KEI L+INSPGG VTAGM IYD
Sbjct: 100 PFDSLLRNRIVFLGSQVDDFNADAVISQLLLLDQQDPTKEIKLFINSPGGSVTAGMGIYD 159
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
MQF + P+ST C+G AASMG+ LL++GEKG R ++PNARI++HQP GG G A DIE
Sbjct: 160 AMQFCRAPVSTVCLGLAASMGAFLLASGEKGRRMSMPNARIMIHQPLGGAQGSAVDIEIQ 219
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++I+ K LN + + G+ + +++ DRD MS EA +GV+D V+
Sbjct: 220 AKEIMHHKANLNRLMAFHTGQDVKTIDEDTDRDRYMSPLEAKQYGVIDIVI 270
>gi|294634100|ref|ZP_06712655.1| Clp protease [Streptomyces sp. e14]
gi|292829914|gb|EFF88268.1| Clp protease [Streptomyces sp. e14]
Length = 212
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/174 (47%), Positives = 119/174 (68%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIVF+ Q+++ A +CAQLL L AE+P+ +I+L INSPGG VTAG+AIYDTMQ
Sbjct: 29 LLAQRIVFLGTQVDEVSANRVCAQLLLLSAEDPRTDIALCINSPGGSVTAGLAIYDTMQL 88
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ +ST MG AASMG LL+ G G RFALP+ARI++HQPS G G +DIE A+++
Sbjct: 89 VPNDVSTLAMGFAASMGQFLLTVGTPGKRFALPHARIMMHQPSAGIGGTTADIEIQAENL 148
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
KR + + ++ G++ E + + DRD +A +A ++G+VD+V+ S D+
Sbjct: 149 EYTKRTMERLTARHTGQSEETIARDGDRDRWFTAEQAREYGMVDRVVDSLADVR 202
>gi|313836727|gb|EFS74441.1| Clp protease [Propionibacterium acnes HL037PA2]
gi|314929867|gb|EFS93698.1| Clp protease [Propionibacterium acnes HL044PA1]
gi|314972294|gb|EFT16391.1| Clp protease [Propionibacterium acnes HL037PA3]
Length = 201
Score = 177 bits (448), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 8 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 67
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 68 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 127
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA D+G++D V
Sbjct: 128 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALDYGLIDYV 187
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 188 YSNASQLRGDA 198
>gi|296087193|emb|CBI33567.3| unnamed protein product [Vitis vinifera]
Length = 185
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 78/179 (43%), Positives = 127/179 (70%), Gaps = 1/179 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL++RIVF+ Q++D A L+ +QLLFL+AE+ +K+I L+INSPGG VTAG+ IYD M+
Sbjct: 2 LLRQRIVFLGSQVDDMTADLVISQLLFLDAEDQEKDIKLFINSPGGSVTAGLGIYDAMKL 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K +ST C+G AASMG+ LL++G KG RF +PN+R+++HQP G G+A+++ +++
Sbjct: 62 CKADVSTVCLGLAASMGAFLLASGSKGKRFCMPNSRVMIHQPLGTAGGKATEMGIRIREM 121
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS-RIDIEEKSK 216
+ K +LN+I + GK +++E DRD+ M+A EA ++G++D V+ + +E + +
Sbjct: 122 MYHKIKLNKILSRITGKPEQQIEADTDRDNFMNAWEAKEYGLIDAVIDDGKPGLESQKE 180
>gi|302561916|ref|ZP_07314258.1| Clp protease [Streptomyces griseoflavus Tu4000]
gi|302479534|gb|EFL42627.1| Clp protease [Streptomyces griseoflavus Tu4000]
Length = 211
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 126/200 (63%), Gaps = 2/200 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G+R+ D Y++LL+ERIV + +I++ A + AQ ++LE P ++ISL
Sbjct: 9 VLPEFTERTMSGQRTMDPYAKLLQERIVILGTRIDETSANDVMAQFMYLEHHAPDQDISL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A AI+DT++++ + T C+GQA +LLL+AG G R LP +R++L
Sbjct: 69 YINSPGGSFHAMSAIHDTLRYVTCDVETVCLGQAEGAAALLLAAGTPGKRLVLPGSRLVL 128
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP GQ SD+ A+++ +I+ R+ E+ V++ G+T E+V ++RD ++ A A
Sbjct: 129 RQPVLLEPVEGQTSDLAIQAEELNRIRARMEEMLVRHTGRTAEQVRADIERDTVLDAGAA 188
Query: 196 CDWGVVDKVLMSRIDIEEKS 215
++G+ D+V+ R + S
Sbjct: 189 VEYGLADRVVPHRRSLPPAS 208
>gi|302532651|ref|ZP_07284993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
gi|302441546|gb|EFL13362.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. C]
Length = 212
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 85/175 (48%), Positives = 122/175 (69%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RLL +RIV + Q+++ A +CAQLL L A++P+ +ISLY+NSPGG VTAG+AIYDTM+
Sbjct: 28 RLLDQRIVLLGTQVDEVSANRVCAQLLLLSAQDPRSDISLYVNSPGGSVTAGLAIYDTMR 87
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I +ST MG AASMG LL+ G G RFALPNARI++HQPS G G A+D+E A++
Sbjct: 88 LIPNDVSTLAMGFAASMGQFLLTVGTPGKRFALPNARIMMHQPSAGIGGTAADVEIQAEN 147
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ IK+ + I ++ G++ E + + DRD +A +A ++G+VD+V+ S DI
Sbjct: 148 LRFIKKAVERITAQHTGQSEETIARDGDRDRWFTAEQAREYGMVDRVVESLADIR 202
>gi|225680955|gb|EEH19239.1| ATP-dependent Clp protease proteolytic subunit [Paracoccidioides
brasiliensis Pb03]
Length = 235
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 93/173 (53%), Positives = 134/173 (77%), Gaps = 2/173 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+A+YDTM +I
Sbjct: 45 ERIVCLNGEVDETLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA 104
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL G G RF LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRFCLPHSSVMVHQPSGGYFGQATDIAIHAKEILRV 164
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+R+LNEIY ++ K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 165 RRQLNEIYKRHLKKEMSLDEIEKWMERDYFMGAKEALEMGIVDEILDRRIKPK 217
>gi|168043511|ref|XP_001774228.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674496|gb|EDQ61004.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 243
Score = 176 bits (447), Expect = 1e-42, Method: Composition-based stats.
Identities = 82/183 (44%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
+EQ R + D + LL++RI+F+ Q++D A LI +Q+L L+A++P ++I L+INSP
Sbjct: 10 IEQFAR-LQDLDPGTMLLQQRILFLGSQVDDFSADLIISQMLLLDAQDPTRDIKLFINSP 68
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG VTAGM IYD M+ K +ST C G AASMG+ LL+AG KG R+ +PNAR+++HQP G
Sbjct: 69 GGSVTAGMGIYDAMKLCKADVSTVCFGLAASMGAFLLTAGTKGKRYCMPNARVMIHQPLG 128
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G G A D ++++ K +L +I + G+ VE DRD+ M+A EA ++G+VD
Sbjct: 129 GAGGTAIDGALQVREMMFHKYKLQKIMSRLTGQPEARVEADTDRDNFMNAWEAMEYGLVD 188
Query: 203 KVL 205
V+
Sbjct: 189 GVI 191
>gi|332190658|gb|AEE28779.1| ATP-dependent Clp protease proteolytic subunit 6 [Arabidopsis
thaliana]
Length = 289
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + + + +I
Sbjct: 101 PVMPSVM--TPGGP--LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDIL 156
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T G AAS G+LLL+ GEKGMR+A+PN R++
Sbjct: 157 MYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVM 216
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + ++ +++++ +Y G+ E+V++ +RD +SASEA
Sbjct: 217 IHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEAL 276
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 277 EFGLIDGLLET 287
>gi|297844024|ref|XP_002889893.1| hypothetical protein ARALYDRAFT_471314 [Arabidopsis lyrata subsp.
lyrata]
gi|297335735|gb|EFH66152.1| hypothetical protein ARALYDRAFT_471314 [Arabidopsis lyrata subsp.
lyrata]
Length = 271
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + + + +I
Sbjct: 83 PVMPSVM--TPGGP--LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDIL 138
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T G AAS G+LLL+ GEKGMR+A+PN R++
Sbjct: 139 MYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVM 198
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + ++ +++++ +Y G+ E+V++ +RD +SASEA
Sbjct: 199 IHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEAL 258
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 259 EFGLIDGLLET 269
>gi|297197433|ref|ZP_06914830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
gi|197716281|gb|EDY60315.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sviceus ATCC 29083]
Length = 220
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/177 (45%), Positives = 116/177 (65%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIV + Q+++ A +C+QLL L AE+P+ +ISLYINSPGG V AG+AIYDTM+
Sbjct: 37 LLAQRIVLLGTQVDEVSANRVCSQLLVLSAEDPRTDISLYINSPGGSVYAGLAIYDTMRL 96
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LL G G R+ALPNARI++HQ S G G +DI A+++
Sbjct: 97 IPNDVSTLAMGFAASMGQFLLCGGTPGKRYALPNARIMMHQGSAGIGGTTADILIQAENL 156
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
K+ + + +N G+T E + + DRD +A EA ++G+VD+V+ S D+ +
Sbjct: 157 DHSKQTMERLLAENTGQTPETIARDGDRDRWFTAEEAREYGMVDRVVESLADVRPAA 213
>gi|18391311|ref|NP_563893.1| CLPP6; serine-type endopeptidase [Arabidopsis thaliana]
gi|75313132|sp|Q9SAA2|CLPP6_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 6,
chloroplastic; AltName: Full=Endopeptidase ClpP6;
Short=nClpP6; AltName: Full=nClpP1; Flags: Precursor
gi|4835782|gb|AAD30248.1|AC007296_9 Identical to gb|AF016621 ATP-dependent Clp protease proteolytic
subunit from Arabidopsis thaliana and is a member of the
PF|00574 CLP_protease family. ESTs gb|F13836 and
gb|F13997 come from this gene
gi|13194778|gb|AAK15551.1|AF348580_1 putative ATP-dependent Clp protease proteolytic subunit ClpP6
[Arabidopsis thaliana]
gi|21592854|gb|AAM64804.1| ATP-dependent Clp protease proteolytic subunit (ClpP6) [Arabidopsis
thaliana]
gi|110737993|dbj|BAF00932.1| putative ATP-dependent Clp protease proteolytic subunit
[Arabidopsis thaliana]
gi|332190657|gb|AEE28778.1| ATP-dependent Clp protease proteolytic subunit 6 [Arabidopsis
thaliana]
Length = 271
Score = 176 bits (447), Expect = 2e-42, Method: Composition-based stats.
Identities = 69/191 (36%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + + + +I
Sbjct: 83 PVMPSVM--TPGGP--LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDIL 138
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T G AAS G+LLL+ GEKGMR+A+PN R++
Sbjct: 139 MYLNCPGGSTYSVLAIYDCMSWIKPKVGTVAFGVAASQGALLLAGGEKGMRYAMPNTRVM 198
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + ++ +++++ +Y G+ E+V++ +RD +SASEA
Sbjct: 199 IHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEAL 258
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 259 EFGLIDGLLET 269
>gi|116784526|gb|ABK23378.1| unknown [Picea sitchensis]
Length = 341
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 116/174 (66%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D S LL++RIVF+ Q++D A I +QLL L+ E+ K+I L+INSPGG VTAGM I
Sbjct: 98 LDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTAGMGI 157
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD M+ K +ST C G AASMG+ LL++G +G RF +PNA++++HQP GG G A ++
Sbjct: 158 YDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSAIEMA 217
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++++ K +L +I + K+ E++ K DRD+ ++ EA ++G+ D V+
Sbjct: 218 LQAKELMYHKIKLTKIMSRLTDKSEEQIAKDTDRDYFLNPWEAVEYGLADAVID 271
>gi|298252719|ref|ZP_06976513.1| ATP-dependent Clp protease, protease subunit [Gardnerella vaginalis
5-1]
gi|297533083|gb|EFH71967.1| ATP-dependent Clp protease, protease subunit [Gardnerella vaginalis
5-1]
Length = 224
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/193 (42%), Positives = 131/193 (67%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P EQT G ++ D Y++L ++RI+F+ Q++D A I AQLL LE+ + +++ +
Sbjct: 32 VLPQFGEQTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMAQLLVLESMDSDRDVMM 91
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+I P + T C+GQAAS +++L+AG G R LPNAR+L+
Sbjct: 92 YINSPGGSMTAMTAIYDTMQYINPDVQTVCLGQAASAAAIILAAGAAGKRMILPNARVLI 151
Query: 138 HQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G +A++IE A+++++++ L K+ G+ E + K ++ D I++ASEA
Sbjct: 152 HQPAMGQDFGKATEIELQAKEMLRLRSWLESTLAKHTGQDIERIRKDIEVDTILTASEAK 211
Query: 197 DWGVVDKVLMSRI 209
+G+VD+VL R
Sbjct: 212 AYGMVDEVLERRA 224
>gi|291298893|ref|YP_003510171.1| endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
gi|290568113|gb|ADD41078.1| Endopeptidase Clp [Stackebrandtia nassauensis DSM 44728]
Length = 210
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 82/194 (42%), Positives = 138/194 (71%), Gaps = 1/194 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP E+T+ G + + Y++L + R +F+ ++D A I +QLL LE ++P+++I +
Sbjct: 10 IVPSYTEKTSYGVKEMNPYNKLFENRTIFLGSPVDDTSANDIMSQLLVLEGDDPERDIEM 69
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA MAIYDTMQ+++P I T CMGQAAS ++LL+AG KG R ALPN+R+++
Sbjct: 70 YINSPGGSLTALMAIYDTMQYVRPDIRTVCMGQAASAAAILLAAGAKGKRLALPNSRVII 129
Query: 138 HQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ GQASD+E A++I++++ ++ ++ ++ G+ ++V + ++RD I++A EA
Sbjct: 130 HQPATEGTYGQASDMEIQAREIMRMRDQMEKVLARHTGQELDKVRRDIERDKILNADEAK 189
Query: 197 DWGVVDKVLMSRID 210
++G+VD V+ R
Sbjct: 190 EYGIVDTVMEYRKK 203
>gi|218439261|ref|YP_002377590.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7424]
gi|218171989|gb|ACK70722.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 228
Score = 176 bits (446), Expect = 2e-42, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 119/199 (59%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + + LI AQLL+L+ ++P K I YINS G
Sbjct: 24 DLESLLLKERIVYLGMPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTG 83
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IKPP+ T C+GQA +++LSAG KG R +LP+A
Sbjct: 84 TSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCRASLPHAT 143
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ KR + EI+ KN G+T E++ K LDR M+ +
Sbjct: 144 IVLNQNRTGAQGQATDIQIRAKEVLANKRTMLEIFAKNTGQTVEKLAKDLDRTFYMTPEQ 203
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL SR ++ +
Sbjct: 204 AKEYGLIDRVLESRKELPK 222
>gi|283783340|ref|YP_003374094.1| Clp protease [Gardnerella vaginalis 409-05]
gi|297243348|ref|ZP_06927281.1| ATP-dependent Clp protease, protease subunit [Gardnerella vaginalis
AMD]
gi|283442109|gb|ADB14575.1| Clp protease [Gardnerella vaginalis 409-05]
gi|296888595|gb|EFH27334.1| ATP-dependent Clp protease, protease subunit [Gardnerella vaginalis
AMD]
Length = 224
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 130/193 (67%), Gaps = 1/193 (0%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P EQT G ++ D Y++L ++RI+F+ Q++D A I AQLL LE+ + +++ +
Sbjct: 32 VLPQFGEQTPYGMKTQDPYTKLFEDRIIFMGVQVDDTSADDIMAQLLVLESMDSDRDVMM 91
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+I P + T C+GQAAS +++L+AG G R LPNAR+L+
Sbjct: 92 YINSPGGSMTAMTAIYDTMQYINPDVQTVCLGQAASAAAIILAAGAAGKRMILPNARVLI 151
Query: 138 HQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
HQP+ G +A++IE A+++++++ L K+ G+ E + K ++ D I++A EA
Sbjct: 152 HQPAMGQDFGKATEIELQAKEMLRLRSWLESTLAKHTGQDIERIRKDIEVDTILTAPEAK 211
Query: 197 DWGVVDKVLMSRI 209
+G+VD+VL R
Sbjct: 212 AYGMVDEVLERRA 224
>gi|302556966|ref|ZP_07309308.1| Clp protease [Streptomyces griseoflavus Tu4000]
gi|302474584|gb|EFL37677.1| Clp protease [Streptomyces griseoflavus Tu4000]
Length = 218
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 126/199 (63%), Gaps = 1/199 (0%)
Query: 18 LVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L P E R D + ++LL +RIV + Q+++ A +CAQLL L AE+P+ +IS
Sbjct: 12 LTPRAEEGDTPPNRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLILSAEDPRTDIS 71
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V AG+AIYDTM+ I ++T MG AASMG LL G G R+ALPNAR++
Sbjct: 72 LYINSPGGSVHAGLAIYDTMRLIPNDVATLAMGFAASMGQFLLCVGAPGKRYALPNARVM 131
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPSGG G +DIE A+ + KR + I ++ G+T E + + DRD +A +A
Sbjct: 132 MHQPSGGIGGTTADIEIQAESLDFTKRTIERITAEHTGQTPETISRDGDRDRWFTAEQAR 191
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G+VD+V+ S D+ +
Sbjct: 192 EYGMVDRVVESLDDVRPAA 210
>gi|328907724|gb|EGG27488.1| Clp protease [Propionibacterium sp. P08]
Length = 212
Score = 175 bits (445), Expect = 3e-42, Method: Composition-based stats.
Identities = 85/191 (44%), Positives = 126/191 (65%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + ++Y LL+ RIVF+ +++D A +CAQ+L L AE+P+ +I LYINSPGG
Sbjct: 19 ETGGAGMTDNVYQSLLRNRIVFLGSEVKDENANALCAQMLLLNAEDPEADIYLYINSPGG 78
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT GMAIYDTMQ+I ++T MG AASMG LL+AG G R+ALP+A+IL+HQP GG
Sbjct: 79 SVTGGMAIYDTMQWISNDVATVTMGMAASMGQFLLTAGTPGKRYALPHAKILMHQPLGGV 138
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A++I +A+ + KR L+++ + G T E++ + DRDH +A EA D+G++D V
Sbjct: 139 GGTATEIAINAKMLKDTKRELSQLNADHSGHTLEQILEDSDRDHWFTAQEALDYGLIDYV 198
Query: 205 LMSRIDIEEKS 215
+ + +
Sbjct: 199 YSNASQLRGDA 209
>gi|284034788|ref|YP_003384719.1| endopeptidase Clp [Kribbella flavida DSM 17836]
gi|283814081|gb|ADB35920.1| Endopeptidase Clp [Kribbella flavida DSM 17836]
Length = 192
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 81/172 (47%), Positives = 120/172 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IY RLL +RI+ + +I+D A +CAQL+ L AE+P+ +ISLYINSPGG V+AG+AIYD
Sbjct: 14 IYQRLLWQRILVLGDEIKDENANALCAQLILLNAEDPKADISLYINSPGGSVSAGLAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM FI ++T+ MG ASMG +LL+ G G R++LP+ARI++HQP+GG G ASDI+
Sbjct: 74 TMNFISNDVATYAMGLVASMGQVLLTCGAPGKRYSLPHARIMMHQPTGGMGGTASDIKTQ 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+ + K+ L ++ K G+ E+V + DRD + +A ++G+VD++L
Sbjct: 134 AEQSLLAKKDLAKLLSKRTGQPEEKVTEDFDRDRWFTPDQAVEYGIVDRILT 185
>gi|294786961|ref|ZP_06752215.1| Clp protease [Parascardovia denticolens F0305]
gi|315226600|ref|ZP_07868388.1| ATP-dependent Clp protease proteolytic subunit [Parascardovia
denticolens DSM 10105]
gi|294485794|gb|EFG33428.1| Clp protease [Parascardovia denticolens F0305]
gi|315120732|gb|EFT83864.1| ATP-dependent Clp protease proteolytic subunit [Parascardovia
denticolens DSM 10105]
Length = 206
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 92/193 (47%), Positives = 136/193 (70%), Gaps = 3/193 (1%)
Query: 16 LGLVPMVVEQTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
L + P + +T G D I+SRLLK+RI+++ +++D A +ICAQ+L L AE+P+K+
Sbjct: 5 LPVSPRMEGETPMGGG--DPIFSRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPKKD 62
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I LYINSPGG +TAGMAIYDTMQ I+P ++T +G AASMG LLS+G KG RF +AR
Sbjct: 63 IWLYINSPGGSITAGMAIYDTMQLIEPDVATVAVGMAASMGQFLLSSGTKGKRFITSHAR 122
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+L+HQPSGG G A+D+ +A+ I+ +K+ L+E+ + G T EE+ + + DH +A +
Sbjct: 123 VLMHQPSGGVGGTATDVRINAELIMDMKKTLSELTAEQTGHTVEEIYRDNEYDHWFTAQQ 182
Query: 195 ACDWGVVDKVLMS 207
A D+G VDK++ +
Sbjct: 183 ALDYGFVDKIVTT 195
>gi|119716962|ref|YP_923927.1| ClpP1 peptidase. Serine peptidase. MEROPS family S14 [Nocardioides
sp. JS614]
gi|119537623|gb|ABL82240.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nocardioides
sp. JS614]
Length = 200
Score = 175 bits (444), Expect = 3e-42, Method: Composition-based stats.
Identities = 79/170 (46%), Positives = 115/170 (67%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
RLL +RI+ + Q++D +A +CA+LL L AE+P ++I+LYINSPGG V+AG+AIYDTM
Sbjct: 14 DRLLHQRIIVLGQQVDDDIANKLCAELLLLSAEDPHRDIALYINSPGGSVSAGLAIYDTM 73
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ I +ST MG AASMG LLSAG G R+ALP++R+L+HQ S G G A DIE A+
Sbjct: 74 RLIPNDVSTLAMGLAASMGQFLLSAGTPGKRYALPHSRVLMHQGSAGIGGTAIDIEIQAE 133
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++ K + + ++ G+ E +E+ RD +A +A ++G VD+VL
Sbjct: 134 NLEHTKNVMTGLIAEHTGQPVEVIERDSLRDRWFTAEQAREYGFVDRVLT 183
>gi|29827687|ref|NP_822321.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
avermitilis MA-4680]
gi|67460536|sp|Q82NZ4|CLPP1_STRAW RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|29604787|dbj|BAC68856.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces avermitilis MA-4680]
Length = 217
Score = 175 bits (444), Expect = 4e-42, Method: Composition-based stats.
Identities = 88/198 (44%), Positives = 124/198 (62%), Gaps = 8/198 (4%)
Query: 26 TNRGERSYDIYSR--------LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ R E SR LL +RIV + Q+++ A +CAQLL L AE+ + +ISL
Sbjct: 13 SPRAEEGDTPPSRFDDHLAAQLLAQRIVLLGTQVDEVSANRVCAQLLLLSAEDSRTDISL 72
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG VTAG+AIYDTM+ I +ST MG AASMG LLS G G RFALPNARI++
Sbjct: 73 YINSPGGSVTAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGAAGKRFALPNARIMM 132
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQPS G G +DIE A+++ K+ + I ++ G++ E + + DRD +A +A +
Sbjct: 133 HQPSAGIGGTTADIEIQAENLEFTKKAIERITAEHTGQSEETISRDGDRDRWFTAEQAKE 192
Query: 198 WGVVDKVLMSRIDIEEKS 215
+G+VD+V+ S D+ +
Sbjct: 193 YGMVDRVVESLDDVRPTA 210
>gi|327292805|ref|XP_003231100.1| ATP-dependent Clp protease [Trichophyton rubrum CBS 118892]
gi|326466730|gb|EGD92183.1| ATP-dependent Clp protease [Trichophyton rubrum CBS 118892]
Length = 223
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+AIYDTM +I+
Sbjct: 44 ERIVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS 103
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHAKEILRV 163
Query: 162 KRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ +LN+IY ++ GK T EE+EK ++RD+ M A EA + G+VD +L R+ +E+S
Sbjct: 164 RHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEALEMGIVDSILDRRMPSKEES 220
>gi|315042532|ref|XP_003170642.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma gypseum
CBS 118893]
gi|311344431|gb|EFR03634.1| ATP-dependent Clp protease proteolytic subunit [Arthroderma gypseum
CBS 118893]
Length = 222
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 95/177 (53%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+AIYDTM +I+
Sbjct: 44 ERIVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS 103
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHAKEILRV 163
Query: 162 KRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ +LN+IY ++ GK T +E+EK ++RD+ M A EA + G+VD +L R+ +E+S
Sbjct: 164 RHQLNQIYKRHLTGKEMTLDEIEKLMERDYFMGAKEALEMGIVDSILDRRVPSKEES 220
>gi|32476642|ref|NP_869636.1| ATP-dependent Clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
gi|67460513|sp|Q7UK67|CLPP1_RHOBA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|32447188|emb|CAD77014.1| ATP-dependent clp protease proteolytic subunit [Rhodopirellula
baltica SH 1]
Length = 227
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 129/191 (67%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q+ + +R + LL+ RIVF+ G+I A I +LL+L++EN +K+I LYINSPGG
Sbjct: 36 QSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGG 95
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VTA +AIYDTMQ + P++T+C+G+A S ++LL G KG RF LPN+R+++HQP GG
Sbjct: 96 SVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGGV 155
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
SGQ SDIE A ++ + + +LNEI +CGK+ E++ K DRD + A +A ++G+VD +
Sbjct: 156 SGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQIAKDTDRDFFLDAQQAKEYGLVDDL 215
Query: 205 LMSRIDIEEKS 215
L+ EE
Sbjct: 216 LLGTPASEEDE 226
>gi|283779542|ref|YP_003370297.1| endopeptidase Clp [Pirellula staleyi DSM 6068]
gi|283437995|gb|ADB16437.1| Endopeptidase Clp [Pirellula staleyi DSM 6068]
Length = 208
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 87/192 (45%), Positives = 128/192 (66%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q+ + +R + LL+ RIVF+ G+I A + +LL+L++EN +K+I YINSPGG
Sbjct: 16 QSYQRQRQLTLGDLLLENRIVFLQGEIYTGNANEMVMKLLYLQSENRRKDIHFYINSPGG 75
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V A +A+YDTMQ + P++T+C+GQAAS ++LL G KG R+ALPN+RI++HQP GG
Sbjct: 76 DVAATLAVYDTMQMLSCPVATYCVGQAASGAAVLLLGGTKGKRYALPNSRIMMHQPHGGV 135
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQ SDIE A++I++ + LNEI K+ G+ +++ K DRD +SA EA +GVVD +
Sbjct: 136 GGQISDIEIQAREILRYREVLNEIISKHTGQAIDKIAKDCDRDFFLSAGEAKAYGVVDDI 195
Query: 205 LMSRIDIEEKSK 216
L E + K
Sbjct: 196 LQKMPGSEPEEK 207
>gi|326482374|gb|EGE06384.1| ATP-dependent Clp protease proteolytic subunit [Trichophyton
equinum CBS 127.97]
Length = 223
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+AIYDTM +I+
Sbjct: 44 ERIVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS 103
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 104 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHAKEILRV 163
Query: 162 KRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ +LN+IY ++ GK T EE+EK ++RD+ M A EA + G+VD +L R+ +E+S
Sbjct: 164 RHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEALEMGIVDSILDRRMPSKEES 220
>gi|290962845|ref|YP_003494027.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
scabiei 87.22]
gi|260652371|emb|CBG75504.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces scabiei 87.22]
Length = 218
Score = 175 bits (443), Expect = 5e-42, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 121/177 (68%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIVF+ Q+++ A +CAQLL L AE+P+ +ISL INSPGG VTAG+AI+DTM+
Sbjct: 34 LLAQRIVFLGTQVDEVSANRVCAQLLLLSAEDPRTDISLCINSPGGSVTAGLAIHDTMRL 93
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LLS G +G R+ALPNARI++HQPS G G +DIE A+++
Sbjct: 94 IPNDVSTLAMGFAASMGQFLLSVGARGKRYALPNARIMMHQPSAGIGGTTADIEIQAENL 153
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
KR + I ++ G+T E + + DRD +A +A ++G+VD+V+ + D+ S
Sbjct: 154 EFTKRAIERITAEHTGQTVETISRDGDRDRWFTAEQAREYGMVDRVVETLDDVRPAS 210
>gi|116786337|gb|ABK24071.1| unknown [Picea sitchensis]
Length = 341
Score = 174 bits (442), Expect = 5e-42, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 116/174 (66%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D S LL++RIVF+ Q++D A I +QLL L+ E+ K+I L+INSPGG VTAGM I
Sbjct: 98 LDTTSMLLRQRIVFLGSQVDDVSADFIISQLLLLDLEDSTKDIKLFINSPGGSVTAGMGI 157
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD M+ K +ST C G AASMG+ LL++G +G RF +PNA++++HQP GG G A ++
Sbjct: 158 YDAMKLCKADVSTVCFGLAASMGAFLLASGTRGKRFCMPNAKVMIHQPLGGGGGSAIEMA 217
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++++ K +L +I + K+ E++ K DRD+ ++ EA ++G+ D V+
Sbjct: 218 LQAKELMYHKIKLTKIMSRLTDKSGEQIAKDTDRDYFLNPWEAVEYGLADAVID 271
>gi|21225558|ref|NP_631337.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
coelicolor A3(2)]
gi|256783422|ref|ZP_05521853.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
lividans TK24]
gi|289767298|ref|ZP_06526676.1| Clp protease [Streptomyces lividans TK24]
gi|18203600|sp|Q9X7R9|CLPP3_STRCO RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|4835314|emb|CAB42936.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces coelicolor A3(2)]
gi|289697497|gb|EFD64926.1| Clp protease [Streptomyces lividans TK24]
Length = 217
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 88/199 (44%), Positives = 126/199 (63%), Gaps = 8/199 (4%)
Query: 25 QTNRGE-------RSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+T R E R D + +LL +RIV + Q+++ A +CAQLL L A++P+ +IS
Sbjct: 12 RTPRAEEGDTPATRFDDRLAEQLLDQRIVLLGTQVDEVSANRVCAQLLILSAQDPRTDIS 71
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LY+NSPGG V AG+AIYDTM+ I +ST MG AASMG LLS G G R+ALPNARI+
Sbjct: 72 LYVNSPGGSVHAGLAIYDTMRLIPNDVSTLAMGFAASMGQFLLSVGTAGKRYALPNARIM 131
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQPS G G +DIE A ++ KR + I ++ G++ E + + DRD +A EA
Sbjct: 132 MHQPSAGIGGTTADIEIQADNLDFTKRTIERITAEHTGQSPETISRDGDRDRWFTAEEAR 191
Query: 197 DWGVVDKVLMSRIDIEEKS 215
++G+VD+V+ S D+ +
Sbjct: 192 EYGMVDQVVQSLADVRPAA 210
>gi|258655305|ref|YP_003204461.1| endopeptidase Clp [Nakamurella multipartita DSM 44233]
gi|258558530|gb|ACV81472.1| Endopeptidase Clp [Nakamurella multipartita DSM 44233]
Length = 211
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 121/178 (67%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RLL +RIV + Q++D +A ICAQLL L AE+P+ +ISLYINSPGG V+AG+AI+DTM+
Sbjct: 23 RLLHQRIVVLGQQVDDPIANRICAQLLLLSAEDPRADISLYINSPGGSVSAGLAIFDTMR 82
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I +ST MG AASMG LL+AG G RFALP++RIL+HQ S G G A D++ A++
Sbjct: 83 LIPNDVSTLAMGLAASMGQFLLTAGTPGKRFALPHSRILMHQGSAGIRGTAVDVQIQAEN 142
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ +K ++ + ++ G+ +E+ DRD +A +A ++G+VD VL S D+ +
Sbjct: 143 LEYVKALMHRLTAEHSGQDVATIERDSDRDRWFTADQAVEYGLVDAVLASTSDVRPAA 200
>gi|224179410|ref|YP_002600868.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
gi|217314453|gb|ACK36795.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
Length = 224
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 74/192 (38%), Positives = 122/192 (63%), Gaps = 3/192 (1%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + +++ D+Y+RL +ER++F+ +++D + I +L+L AE+
Sbjct: 1 MPIGVPKVPYRLPGEQQAQWVDLYNRLYRERVLFLGQELDDELCNQIVGMMLYLSAEDSS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+ LYINSPGG VT G+A++DTM+ + I T CMG AAS S +L G R ALP+
Sbjct: 61 QNQELYINSPGGAVTCGLALFDTMEHVAANIITVCMGLAASTASFVLCGGTPLRRCALPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR+++HQP GG GQAS+I + +I++++R++ +Y + G++ ++V +DRD SA
Sbjct: 121 ARVMIHQPEGGTRGQASEIIYESVEILRLRRQVGLLYAQRTGQSIDQVANDMDRDTFFSA 180
Query: 193 SEACDWGVVDKV 204
EA +G+VD V
Sbjct: 181 EEARSYGLVDGV 192
>gi|255636441|gb|ACU18559.1| unknown [Glycine max]
Length = 273
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 115/191 (60%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G D+ S L + RI+F+ + +A + +QL+ L + +I
Sbjct: 85 PITPAVM--TPGGP--LDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDENADIL 140
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 141 VYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIM 200
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + V+ + +++++Y G+ E+V++ +RD +S EA
Sbjct: 201 IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLSVFEAL 260
Query: 197 DWGVVDKVLMS 207
++G +D VL +
Sbjct: 261 EFGFIDGVLET 271
>gi|255078128|ref|XP_002502644.1| predicted protein [Micromonas sp. RCC299]
gi|226517909|gb|ACO63902.1| predicted protein [Micromonas sp. RCC299]
Length = 279
Score = 174 bits (442), Expect = 6e-42, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 121/202 (59%), Gaps = 4/202 (1%)
Query: 11 SEDVFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
S + + VP V +T + DI++ L +ERIV+V I++ + + A +L+L+
Sbjct: 74 SVATMMPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWVGQTIDEELGNQLVATMLYLD 133
Query: 68 A-ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+ E K+I LYIN+ GG V MAI DTM +IK + G A +MG +LL+ G KG
Sbjct: 134 SIEKGGKDIYLYINTEGGDVVPTMAILDTMGYIKSDVGCVGFGSARAMGGMLLANGAKGK 193
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R ALPN I+LH P+G G ASDI ++++KI+ ++N++ + G+ E+V + + R
Sbjct: 194 RAALPNTCIMLHHPAGVARGSASDIHNEGKELLKIRAKINKMVSRATGQPEEKVHEDIRR 253
Query: 187 DHIMSASEACDWGVVDKVLMSR 208
D ++A +A D+G+VDKVL R
Sbjct: 254 DFHLTAEQALDYGIVDKVLYKR 275
>gi|218510872|ref|ZP_03508750.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
Brasil 5]
Length = 153
Score = 174 bits (441), Expect = 7e-42, Method: Composition-based stats.
Identities = 128/153 (83%), Positives = 145/153 (94%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVPMVVEQTNRGERSYDIYSRLLKERI+F+TG +EDHMATL+CAQLLFLEAENP+KEI
Sbjct: 1 MALVPMVVEQTNRGERSYDIYSRLLKERIIFLTGAVEDHMATLVCAQLLFLEAENPKKEI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYINSPGGVVTAGMAIYDTMQFIKP +ST C+GQAASMGSLLL+AG K MRFA PN+RI
Sbjct: 61 ALYINSPGGVVTAGMAIYDTMQFIKPAVSTLCIGQAASMGSLLLAAGHKDMRFATPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
++HQPSGGF GQASDIERHA+DI+K+KRRLNE+
Sbjct: 121 MVHQPSGGFQGQASDIERHARDILKMKRRLNEV 153
>gi|602758|gb|AAA81878.1| clp-like energy-dependent protease [Solanum lycopersicum]
Length = 275
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 70/191 (36%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G + D+ + L + RI+F+ + +A + +QL+ L + +I
Sbjct: 87 PIMPAVM--TPVG--ALDLSTVLFRNRIIFIGQPVNSAVAQKVISQLVTLATIDENADIL 142
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 143 IYLNCPGGSTYSVLAIYDCMSWIKPKVGTVCFGAAASQGALLLAGGEKGMRYAMPNARIM 202
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + V+ +++++++Y G++ E ++ +RD MS++EA
Sbjct: 203 IHQPQSGCGGHVEDVRRQVNEAVQSRQKVDKMYAAFTGQSIEMIQTYTERDRFMSSAEAM 262
Query: 197 DWGVVDKVLMS 207
++G++D VL +
Sbjct: 263 EFGLIDGVLET 273
>gi|224125072|ref|XP_002329885.1| predicted protein [Populus trichocarpa]
gi|222871122|gb|EEF08253.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 3/195 (1%)
Query: 14 VFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V +T + DI++ L +ERI+F+ I++ + I A +L+L+ +
Sbjct: 66 KMMPIGTPRVPYRTPGEGTWQWVDIWNALYRERILFIGQNIDEEFSNQILATMLYLDTID 125
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K + LYIN PGG +T +AIYDTMQ +K P+ T C+G A ++ LL+AGEKG R A+
Sbjct: 126 DSKRMYLYINGPGGDLTPSLAIYDTMQSLKSPVGTHCVGFAYNLAGFLLTAGEKGNRSAM 185
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI A ++++I+ L K G+ +E++ K L R
Sbjct: 186 PLSRIALQSPAGAARGQADDICNEANELLRIRDYLYNELSKKTGQPFEKISKDLSRMKRF 245
Query: 191 SASEACDWGVVDKVL 205
A +A ++G++D+++
Sbjct: 246 EAQDALEYGLIDRII 260
>gi|326475380|gb|EGD99389.1| ATP-dependent Clp protease [Trichophyton tonsurans CBS 112818]
Length = 246
Score = 174 bits (441), Expect = 8e-42, Method: Composition-based stats.
Identities = 96/177 (54%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+AIYDTM +I+
Sbjct: 67 ERIVCLNGEVDETLSAAIVAQLLFLEADNPEKPIQLYINSPGGSVTAGLAIYDTMTYIQS 126
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 127 PVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHAKEILRV 186
Query: 162 KRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ +LN+IY ++ GK T EE+EK ++RD+ M A EA + G+VD +L R+ +E+S
Sbjct: 187 RHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEALEMGIVDSILDRRMPSKEES 243
>gi|229915410|gb|ACQ90755.1| proteolytic subunit 2 of clp protease [Oocystis solitaria]
Length = 204
Score = 174 bits (441), Expect = 9e-42, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 129/193 (66%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+++RL +ER++F+ ++D ++ + +L+L AE
Sbjct: 1 MPIGVPKVPFRLP-GEPSAQWVDLFNRLYRERLLFLCQDLDDEVSNQLIGIMLYLNAEEK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I ++INS GG VT G+A+YD M F++ +ST C+G AASM S +L+ G++G R ALP
Sbjct: 60 FKDIYIFINSLGGSVTCGIAVYDVMNFVEADVSTICVGTAASMASFVLAGGKRGKRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ RI++HQP GG GQAS++ ++++ +++R++ +IY + ++ + + +DRD MS
Sbjct: 120 HTRIMIHQPEGGGQGQASEVLSESEEVRRLRRQVGQIYAEQTSQSLNRISRDMDRDQFMS 179
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD+V
Sbjct: 180 AREAKEYGLVDQV 192
>gi|124112049|ref|YP_001019072.1| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
gi|160380575|sp|Q19VC3|CLPP_CHLAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124012165|gb|ABD62181.2| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
Length = 225
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 66/204 (32%), Positives = 119/204 (58%), Gaps = 3/204 (1%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + S D+Y+RL +ERI+F+ ++D +A + ++FL +E+
Sbjct: 1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I YINSPGG + +G+ +YD +Q I ++T CMG AASM S +L+ G G R P+
Sbjct: 61 KGIFFYINSPGGSMNSGLGVYDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
AR++LHQP GG G+A + + ++ +++ + +Y K G+ E + ++RD+ M
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYAKRTGQPIERIRIDMNRDNFMRP 180
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
A ++G++D ++ +++E K
Sbjct: 181 RAAKEYGLIDHMITHITELDELEK 204
>gi|126348112|emb|CAJ89833.1| putative ATP-dependent Clp protease proteolytic subunit 1
[Streptomyces ambofaciens ATCC 23877]
Length = 217
Score = 174 bits (440), Expect = 9e-42, Method: Composition-based stats.
Identities = 85/177 (48%), Positives = 117/177 (66%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIV + Q+++ A +CAQLL L AE+P+ +ISLYINSPGG V AG+AIYDTM+
Sbjct: 34 LLTQRIVLLGTQVDEVSANRVCAQLLILSAEDPRTDISLYINSPGGSVHAGLAIYDTMRL 93
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LLS G G R ALPNARI++HQPS G G +DIE A ++
Sbjct: 94 IPNDVSTLAMGFAASMGQFLLSVGAAGKRHALPNARIMMHQPSAGIGGTTADIEIQADNL 153
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
KR + I ++ G++ E + + DRD +A EA ++G+VD+V+ S D+ +
Sbjct: 154 EFTKRTIERITAEHTGQSPETISRDGDRDRWFTAEEAKEYGMVDQVVQSLADVRPAA 210
>gi|195612324|gb|ACG27992.1| ATP-dependent Clp protease proteolytic subunit 2 [Zea mays]
gi|238007600|gb|ACR34835.1| unknown [Zea mays]
Length = 292
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 15 FLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + P V +T + DI++ L +ERI+F+ I++ + + A +L+L++ +
Sbjct: 76 MMPIGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDN 135
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYIN PGG +T MA+YDTM +K PI T C+G A ++ +L+AGEKG R +P
Sbjct: 136 SKKIMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMP 195
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
RI L P+G GQA DIE A ++++IK L + G + E++ + L R
Sbjct: 196 LCRISLQSPAGAARGQADDIENEANELIRIKNYLYGKLAGHTGHSVEKIHEDLSRVKRFD 255
Query: 192 ASEACDWGVVDKVLM-SRIDIE 212
A A ++G++D+++ SRI E
Sbjct: 256 AEGALEYGIIDRIVRPSRIKKE 277
>gi|115466260|ref|NP_001056729.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|55296987|dbj|BAD68462.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|113594769|dbj|BAF18643.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|215692474|dbj|BAG87894.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704676|dbj|BAG94304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737501|dbj|BAG96631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197521|gb|EEC79948.1| hypothetical protein OsI_21540 [Oryza sativa Indica Group]
gi|222634917|gb|EEE65049.1| hypothetical protein OsJ_20046 [Oryza sativa Japonica Group]
Length = 297
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 15 FLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + P V +T + DI++ L +ERI+F+ I++ + + A +L+L++ +
Sbjct: 81 MMPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDN 140
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYIN PGG +T MA+YDTM +K PI T C+G A ++ +L+AGEKG R +P
Sbjct: 141 TKKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMP 200
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
RI L P+G GQA DIE A ++++IK L ++ G +++ + L R
Sbjct: 201 LCRISLQSPAGAARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFD 260
Query: 192 ASEACDWGVVDKVLM-SRIDIE 212
A A ++G++D+++ SRI E
Sbjct: 261 AEGALEYGIIDRIIRPSRIKKE 282
>gi|118482644|gb|ABK93241.1| unknown [Populus trichocarpa]
Length = 297
Score = 174 bits (440), Expect = 1e-41, Method: Composition-based stats.
Identities = 79/182 (43%), Positives = 118/182 (64%)
Query: 26 TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
T+ D LL+ERIVF+ I+D +A I +QLL L+A++P K+I L++N PGG
Sbjct: 76 TSMRGAETDAMGLLLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNCPGGS 135
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
++A MAIYD +Q ++ +ST +G +AS S++L G KG RFA+PN RI++HQP GG S
Sbjct: 136 LSASMAIYDVVQLVRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGAS 195
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA D+E A++I+ K + I +T E+V+K +DRD MS EA ++G++D V+
Sbjct: 196 GQAIDVEIQAREIMHNKNNIIRIVSGFTSRTVEQVQKDMDRDRYMSPIEAVEYGIIDGVI 255
Query: 206 MS 207
Sbjct: 256 DR 257
>gi|225446742|ref|XP_002282652.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 291
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 81/169 (47%), Positives = 119/169 (70%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LLKERIVF+ ++D +A I +QLL L+A++P K+I L+INSPGG ++A MAIYD +Q
Sbjct: 83 LLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLSATMAIYDIVQL 142
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ +ST +G +AS S++L G KG RFA+PN RI++HQP GG SGQA D+E AQ+I
Sbjct: 143 VRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAQEI 202
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ K + +I G+++E+VEK +DRD MS EA ++G++D V+
Sbjct: 203 MHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAVEYGIIDAVIDR 251
>gi|326330021|ref|ZP_08196335.1| Clp protease [Nocardioidaceae bacterium Broad-1]
gi|325952229|gb|EGD44255.1| Clp protease [Nocardioidaceae bacterium Broad-1]
Length = 210
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 80/169 (47%), Positives = 113/169 (66%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL +RI+ + +++D +A ICAQLL L AE+P ++ISLYINSPGG VTAGMAIYD M
Sbjct: 18 RLQNQRIIVLGQEVDDAIANRICAQLLLLSAEDPHRDISLYINSPGGSVTAGMAIYDVMH 77
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I +ST MG AASMG LL+AG G R+ LP+ +LLH+ S G G A+DIE A
Sbjct: 78 LIPNDVSTLGMGMAASMGQFLLTAGTPGKRYVLPHTEVLLHKGSAGIGGSAADIEVQAAR 137
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ ++ +++ EI + G++ E++++ RD +A EA D+G VD+VL
Sbjct: 138 LARMTQQMLEITAAHTGQSVEQIDQDSLRDRWFTAEEARDYGFVDEVLN 186
>gi|308177635|ref|YP_003917041.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
arilaitensis Re117]
gi|307745098|emb|CBT76070.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrobacter
arilaitensis Re117]
Length = 206
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 90/189 (47%), Positives = 122/189 (64%), Gaps = 1/189 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P + G Y IY+RLLKERI+++ + D A IC+QLL L AE+P+K+I LY
Sbjct: 7 TPTMAASEPAGRDDY-IYNRLLKERIIWLGSDVRDDNANAICSQLLLLSAEDPEKDIYLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTM FI + T G AASMG LLS+G G RFA PNARIL+H
Sbjct: 66 INSPGGSITAGMAIYDTMNFIPNDVVTVATGLAASMGQFLLSSGTPGKRFATPNARILMH 125
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G ASDI+ A+ I+ +K+ ++E+ + G+T E++ RD +A +A ++
Sbjct: 126 QPSGGIGGTASDIKIQAELIMHMKKVMSELTAEQTGQTVEQILIDNQRDKWFTAQDALEY 185
Query: 199 GVVDKVLMS 207
G D++
Sbjct: 186 GFFDQIATH 194
>gi|49574608|ref|NP_848084.2| ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris]
gi|68565049|sp|Q85FJ8|CLPP_ADICA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48476019|gb|AAP29415.2| ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris]
Length = 200
Score = 173 bits (439), Expect = 1e-41, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 126/193 (65%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D +A + +++L +E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQA 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LY+NSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++Y + GK + + ++RD +S
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITKVYAQRTGKPLWLISEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A EA D+GVVD V
Sbjct: 181 AEEAQDYGVVDLV 193
>gi|327540247|gb|EGF26836.1| Peptidase S14, ClpP [Rhodopirellula baltica WH47]
Length = 205
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 87/191 (45%), Positives = 129/191 (67%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
Q+ + +R + LL+ RIVF+ G+I A I +LL+L++EN +K+I LYINSPGG
Sbjct: 14 QSYQRQRQMTLGDLLLENRIVFMQGEIHYANANEIVMKLLYLQSENRRKDIHLYINSPGG 73
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VTA +AIYDTMQ + P++T+C+G+A S ++LL G KG RF LPN+R+++HQP GG
Sbjct: 74 SVTATLAIYDTMQMLSCPVATYCVGEACSGAAVLLIGGAKGKRFCLPNSRVMMHQPLGGV 133
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
SGQ SDIE A ++ + + +LNEI +CGK+ E++ K DRD + A +A ++G+VD +
Sbjct: 134 SGQVSDIEIQAAEMFRYRDKLNEIISSHCGKSVEQIAKDTDRDFFLDAQQAKEYGLVDDL 193
Query: 205 LMSRIDIEEKS 215
L+ EE
Sbjct: 194 LLGTPASEEDE 204
>gi|168041627|ref|XP_001773292.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675334|gb|EDQ61830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 220
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 9 KDSEDVFLGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+ + + P V +T G + DI++ L +ERI+F+ I++ + A +L+
Sbjct: 1 RGKVTMMAPIGTPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLY 60
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ + K + LYIN PGG +T MAIYDTM+ IK P+ T +G A + LLL+AG KG
Sbjct: 61 LDSVDNSKPMHLYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKG 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
MR A+P R+ L P+G GQA DI A+++ +++ + E K G+ +++V K L+
Sbjct: 121 MRVAMPLTRVALMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKTGQPFDKVVKDLN 180
Query: 186 RDHIMSASEACDWGVVDKVLM-SRIDIEEKSK 216
R SA+EA ++G++DKV+ RI + + +
Sbjct: 181 RIKRFSANEALEYGIIDKVVRPKRIKPDARRQ 212
>gi|2827888|gb|AAB99906.1| ATP-dependent Clp protease proteolytic subunit [Arabidopsis
thaliana]
Length = 271
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 116/191 (60%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ S L + RI+F+ I +A + +QL+ L + + + +I
Sbjct: 83 PVMPSVM--TPGGP--LDLSSVLFRNRIIFIGQPINAQVAQRVISQLVTLASIDDKSDIL 138
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + + IYD M +IKP + T G AAS G+ L+ GEKGMR+A+PN R++
Sbjct: 139 MYLNCPGGSTYSVLTIYDCMSWIKPKVGTVAFGVAASQGAFFLAGGEKGMRYAMPNTRVM 198
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + ++ +++++ +Y G+ E+V++ +RD +SASEA
Sbjct: 199 IHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPLEKVQQYTERDRFLSASEAF 258
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 259 EFGLIDGLLET 269
>gi|325092382|gb|EGC45692.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
capsulatus H88]
Length = 229
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+A+YDTM +I
Sbjct: 45 ERIVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA 104
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL G G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVHQPSGGYFGQATDIAIHAKEILRV 164
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+R+LNEIY + K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 165 RRQLNEIYKMHLTKEMSLDEIEKWMERDYFMGAREALEMGIVDEILDRRIKPKTDD 220
>gi|37523336|ref|NP_926713.1| ATP-dependent Clp protease-like protein [Gloeobacter violaceus PCC
7421]
gi|81708690|sp|Q7NEW1|CLPP2_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|35214340|dbj|BAC91708.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 218
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 79/168 (47%), Positives = 114/168 (67%), Gaps = 2/168 (1%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--GVVTAGMAIYDTMQF 98
ERIV++ I D +A L+ AQLL+LE+E+ K I +YINSPG G T+ A+YDTM+
Sbjct: 35 NERIVYLGTPINDVVAELLIAQLLYLESEDNAKPIEIYINSPGVAGFETSAFAVYDTMRH 94
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ PI T C+G A +LL++AG KG R +LPN+RI+L+QP GG GQA+DI AQ++
Sbjct: 95 VRMPIKTICLGLAGGFSALLMAAGTKGQRMSLPNSRIILYQPYGGARGQATDINIRAQEL 154
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ KR LN++ + GKT E+++K +R MS EA +G++DKVL
Sbjct: 155 LTTKRTLNQLLSIHTGKTVEQIDKDTERLFYMSPQEAVSYGLIDKVLE 202
>gi|298252718|ref|ZP_06976512.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Gardnerella vaginalis 5-1]
gi|297533082|gb|EFH71966.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Gardnerella vaginalis 5-1]
Length = 203
Score = 173 bits (438), Expect = 2e-41, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 132/186 (70%)
Query: 22 VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
V+EQ + I++RLLK+RI+++ +++D A +ICAQ+L L AE+P+K+I LYINS
Sbjct: 10 VMEQAEASTSTDSIFNRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPKKDIWLYINS 69
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG +TAGMAIYDTMQ I+P ++T +G AASMG LLS+G G R+ +AR+L+HQPS
Sbjct: 70 PGGSITAGMAIYDTMQLIEPDVATIAVGMAASMGQFLLSSGTPGKRYITSHARVLMHQPS 129
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GG G A+D+ +A+ I+ +K+ L+E+ K G T EE+ + + DH +A +A ++G V
Sbjct: 130 GGVGGTATDVRINAELIMDMKKTLSELTAKQTGHTVEEIYRDNEYDHWFTAQQALEYGFV 189
Query: 202 DKVLMS 207
DK++ +
Sbjct: 190 DKIVTT 195
>gi|225562415|gb|EEH10694.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
capsulatus G186AR]
Length = 229
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+A+YDTM +I
Sbjct: 45 ERIVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA 104
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL G G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVHQPSGGYFGQATDIAIHAKEILRV 164
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+R+LNEIY + K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 165 RRQLNEIYKMHLTKEMSLDEIEKWMERDYFMGAREALEMGIVDEILDRRIKPKTDD 220
>gi|240281120|gb|EER44623.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
capsulatus H143]
Length = 229
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+A+YDTM +I
Sbjct: 45 ERIVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA 104
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL G G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 105 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVHQPSGGYFGQATDIAIHAKEILRV 164
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+R+LNEIY + K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 165 RRQLNEIYKMHLTKEMSLDEIEKWMERDYFMGAREALEMGIVDEILDRRIKPKTDD 220
>gi|239917499|ref|YP_002957057.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
gi|281414011|ref|ZP_06245753.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
gi|239838706|gb|ACS30503.1| ATP-dependent Clp protease proteolytic subunit ClpP [Micrococcus
luteus NCTC 2665]
Length = 205
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 117/177 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y++LLK RIV++ + D A IC+QLL L AE+P+K+I LYINSPGG VTAGMAIYD
Sbjct: 21 LYTQLLKSRIVWLGEDVRDDNANAICSQLLLLSAEDPEKDIYLYINSPGGSVTAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I + T G AASMG LL++G KG R+A P+AR+L+HQPSGG G SDI
Sbjct: 81 TMQYIPNDVVTVATGLAASMGQFLLASGTKGKRYATPHARVLMHQPSGGIGGTESDIRIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
AQ I+ +K+ + E+ + G++ E + + RD +A EA ++G +D + +
Sbjct: 141 AQLILHMKQVMAELTAEQTGQSVETILEDNARDKWFTAQEALEYGFIDHIADRAASV 197
>gi|168036370|ref|XP_001770680.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678041|gb|EDQ64504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 3/201 (1%)
Query: 19 VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
P V +T G + DI++ L +ERI+F+ I++ + A +L+L++ + K +
Sbjct: 6 TPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLYLDSVDNSKPMY 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYIN PGG +T MAIYDTM+ IK P+ T +G A + LLL+AG KGMR A+P R+
Sbjct: 66 LYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKGMRTAMPLTRVA 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
L P+G GQA DI A+++ +++ + E K G+ ++V K L+R SA EA
Sbjct: 126 LMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKTGQPVDKVMKDLNRIKRFSAKEAL 185
Query: 197 DWGVVDKVLM-SRIDIEEKSK 216
++G++DKV+ RI + + +
Sbjct: 186 EYGIIDKVVRPKRIKPDARRQ 206
>gi|300741667|ref|ZP_07071688.1| Clp protease [Rothia dentocariosa M567]
gi|300380852|gb|EFJ77414.1| Clp protease [Rothia dentocariosa M567]
Length = 212
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 116/173 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+RLLKERI+++ ++ D A LIC+Q+L L AE+P+ +I LYINSPGG VTAG+AIYD
Sbjct: 30 VYNRLLKERIIWLGSEVRDSNANLICSQMLVLSAEDPKADIYLYINSPGGSVTAGLAIYD 89
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I + T G AASMG LLL+AG G R+A PNARIL+HQP GG G SDI
Sbjct: 90 TMQLIPNDVVTVATGMAASMGQLLLTAGAPGKRYATPNARILMHQPLGGIGGSGSDIRTQ 149
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
Q + KRRL EI + GK+ +++ + DRD+ +A E ++G D + +
Sbjct: 150 VQLTLDFKRRLAEITAERTGKSVDQIIEDSDRDNWFTAEEGLEYGFFDHIATT 202
>gi|297243349|ref|ZP_06927282.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Gardnerella vaginalis AMD]
gi|296888596|gb|EFH27335.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Gardnerella vaginalis AMD]
Length = 203
Score = 172 bits (437), Expect = 2e-41, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 132/186 (70%)
Query: 22 VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
V+EQ + I++RLLK+RI+++ +++D A +ICAQ+L L AE+P+K+I LYINS
Sbjct: 10 VMEQAEAPTSTDSIFNRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPKKDIWLYINS 69
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG +TAGMAIYDTMQ I+P ++T +G AASMG LLS+G G R+ +AR+L+HQPS
Sbjct: 70 PGGSITAGMAIYDTMQLIEPDVATIAVGMAASMGQFLLSSGTPGKRYITSHARVLMHQPS 129
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GG G A+D+ +A+ I+ +K+ L+E+ K G T EE+ + + DH +A +A ++G V
Sbjct: 130 GGVGGTATDVRINAELIMDMKKTLSELTAKQTGHTVEEIYRDNEYDHWFTAQQALEYGFV 189
Query: 202 DKVLMS 207
DK++ +
Sbjct: 190 DKIVTT 195
>gi|289705668|ref|ZP_06502053.1| Clp protease [Micrococcus luteus SK58]
gi|289557616|gb|EFD50922.1| Clp protease [Micrococcus luteus SK58]
Length = 205
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/177 (46%), Positives = 117/177 (66%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y++LLK RIV++ + D A IC+QLL L AE+P+K+I LYINSPGG VTAGMAIYD
Sbjct: 21 LYTQLLKSRIVWLGEDVRDDNANAICSQLLLLSAEDPEKDIYLYINSPGGSVTAGMAIYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ+I + T G AASMG LL++G KG R+A P+AR+L+HQPSGG G SDI
Sbjct: 81 TMQYIPNDVVTVATGLAASMGQFLLASGAKGKRYATPHARVLMHQPSGGIGGTESDIRIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
AQ I+ +K+ + E+ + G++ E + + RD +A EA ++G +D + +
Sbjct: 141 AQLILHMKQVMAELTAEQTGQSVETILEDNARDKWFTAQEALEYGFIDHIADRAASV 197
>gi|154279296|ref|XP_001540461.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
capsulatus NAm1]
gi|150412404|gb|EDN07791.1| ATP-dependent Clp protease proteolytic subunit [Ajellomyces
capsulatus NAm1]
Length = 211
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 92/176 (52%), Positives = 133/176 (75%), Gaps = 2/176 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G++++ ++ I AQLLFLEA+NP+K I LYINSPGG VTAG+A+YDTM +I
Sbjct: 27 ERIVCLNGEVDESLSASIVAQLLFLEADNPEKPIHLYINSPGGSVTAGLAVYDTMTYISA 86
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL G G R+ LP++ +++HQPSGG+ GQA+DI HA++I+++
Sbjct: 87 PVSTICVGQAASMGSLLLCGGHPGKRYCLPHSSVMVHQPSGGYFGQATDIAIHAKEILRV 146
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+R+LNEIY + K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 147 RRQLNEIYKMHLTKEMSLDEIEKWMERDYFMGAREALEMGIVDEILDRRIKPKTDD 202
>gi|87306485|ref|ZP_01088632.1| ATP-dependent clp protease proteolytic subunit [Blastopirellula
marina DSM 3645]
gi|87290664|gb|EAQ82551.1| ATP-dependent clp protease proteolytic subunit [Blastopirellula
marina DSM 3645]
Length = 198
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 122/178 (68%)
Query: 30 ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
+R + LL+ RIVF+ G+I D A + +LL+L++EN +K I+ YINSPGG VTA
Sbjct: 9 QRQMTLGDMLLENRIVFLQGEIYDGNANELVMKLLYLQSENRRKPINFYINSPGGSVTAT 68
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAIYDTM+ I P+ST+C+G AAS G++LL+ GE G RF LP+A++++HQP GG GQ S
Sbjct: 69 MAIYDTMKVISCPVSTYCVGLAASGGAVLLAGGEAGKRFILPHAKVMIHQPHGGVGGQVS 128
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
DIE A +I+K + LN++ +C + E++ K DRD + A+ A +G+VD++L
Sbjct: 129 DIEIQADEILKTRDVLNQVLADHCNQPVEKIAKDTDRDFYLDANAAKAYGIVDEILTK 186
>gi|213692576|ref|YP_002323162.1| Endopeptidase Clp [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|213524037|gb|ACJ52784.1| Endopeptidase Clp [Bifidobacterium longum subsp. infantis ATCC
15697]
gi|320458728|dbj|BAJ69349.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis ATCC 15697]
Length = 207
Score = 172 bits (436), Expect = 3e-41, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 24 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 84 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVCIN 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 144 AELIMDMKKTMSELTAEQTGHTLEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 203
Query: 215 SK 216
+
Sbjct: 204 QQ 205
>gi|239983579|ref|ZP_04706103.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
Length = 211
Score = 172 bits (435), Expect = 3e-41, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 119/174 (68%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIV + Q+++ A +CAQLL L AE+P+ +ISLYINSPGG VTAG+AIYDTM+
Sbjct: 28 LLTQRIVLLGTQVDETSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLAIYDTMRL 87
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LL+ G G RFALPNARI++HQPS G G A+DI A+++
Sbjct: 88 IPNDVSTLAMGFAASMGQFLLTVGTAGKRFALPNARIMMHQPSAGIGGSAADIAIQAENL 147
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
KR + + ++ G++ E+ + DRD +A +A ++G+VD+V+ + D+
Sbjct: 148 EFTKRAIERLTAEHTGRSEAEISRDSDRDRWFTAEQAKEYGMVDRVVHTLDDVR 201
>gi|294790933|ref|ZP_06756091.1| Clp protease [Scardovia inopinata F0304]
gi|294458830|gb|EFG27183.1| Clp protease [Scardovia inopinata F0304]
Length = 210
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 86/173 (49%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D A +ICAQ+L L AE+P K+I LYINSPGG +TAGMAIYD
Sbjct: 23 IFNRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPTKDIWLYINSPGGSITAGMAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G AASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +
Sbjct: 83 TMQLIEPDVATVAVGMAASMGQFLLSSGTKGKRFITSHARVLMHQPSGGVGGTATDVRIN 142
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ L+E+ + G T EE+ + + DH +A +A D+G VDK++ +
Sbjct: 143 AELIMDMKKTLSELTAEQTGHTLEEIYRDNEYDHWFTAQQALDYGFVDKIVTT 195
>gi|225470285|ref|XP_002266380.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|147794105|emb|CAN62361.1| hypothetical protein VITISV_031921 [Vitis vinifera]
gi|297742668|emb|CBI34817.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 171 bits (434), Expect = 4e-41, Method: Composition-based stats.
Identities = 68/208 (32%), Positives = 118/208 (56%), Gaps = 6/208 (2%)
Query: 14 VFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V +T + D+++ L +ER++++ I++ + + A +L+L++
Sbjct: 78 RMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDEEFSNQLLATMLYLDSIE 137
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K + YINSPGG +T +AIYDTMQ +K P+ T C+G A ++ + LL+AGEKG R A+
Sbjct: 138 SSKRMFFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYNLATFLLAAGEKGNRLAM 197
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI A ++++I+ L G+ +++ K L R
Sbjct: 198 PLSRIALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKTGQPIDKINKDLRRMKRF 257
Query: 191 SASEACDWGVVDKVLMS---RIDIEEKS 215
+A EA ++G++D++L + D K
Sbjct: 258 NAQEALEYGLIDRILRPPRVKADAPRKD 285
>gi|283783341|ref|YP_003374095.1| Clp protease [Gardnerella vaginalis 409-05]
gi|283441958|gb|ADB14424.1| Clp protease [Gardnerella vaginalis 409-05]
Length = 203
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 87/186 (46%), Positives = 132/186 (70%)
Query: 22 VVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
V+EQ + I++RLLK+RI+++ +++D A +ICAQ+L L AE+P+K+I LYINS
Sbjct: 10 VMEQAEAPTSTDPIFNRLLKDRIIWLGSEVKDENANVICAQMLMLAAEDPKKDIWLYINS 69
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG +TAGMAIYDTMQ I+P ++T +G AASMG LLS+G G R+ +AR+L+HQPS
Sbjct: 70 PGGSITAGMAIYDTMQLIEPDVATIAVGMAASMGQFLLSSGTPGKRYITSHARVLMHQPS 129
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
GG G A+D+ +A+ I+ +K+ L+E+ K G T EE+ + + DH +A +A ++G V
Sbjct: 130 GGVGGTATDVRINAELIMDMKKTLSELTAKQTGHTVEEIYRDNEYDHWFTAQQALEYGFV 189
Query: 202 DKVLMS 207
DK++ +
Sbjct: 190 DKIVTT 195
>gi|170516915|gb|ACB15394.1| ClpP1 [Bifidobacterium longum]
Length = 200
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 17 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 76
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 77 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVRIN 136
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 137 AELIMDMKKTMSELTAEQTGHTLEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 196
Query: 215 SK 216
+
Sbjct: 197 QQ 198
>gi|23465518|ref|NP_696121.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
longum NCC2705]
gi|189439549|ref|YP_001954630.1| ATP-dependent Clp proteases Protease subunit [Bifidobacterium
longum DJO10A]
gi|227546003|ref|ZP_03976052.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|239621941|ref|ZP_04664972.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|296453940|ref|YP_003661083.1| endopeptidase Clp [Bifidobacterium longum subsp. longum JDM301]
gi|312132958|ref|YP_004000297.1| clpp2 [Bifidobacterium longum subsp. longum BBMN68]
gi|317482289|ref|ZP_07941310.1| Clp protease [Bifidobacterium sp. 12_1_47BFAA]
gi|322688890|ref|YP_004208624.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis 157F]
gi|322690865|ref|YP_004220435.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. longum JCM 1217]
gi|67460558|sp|Q8G5Q9|CLPP2_BIFLO RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|23326178|gb|AAN24757.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
longum NCC2705]
gi|189427984|gb|ACD98132.1| ATP-dependent Clp proteases Protease subunit [Bifidobacterium
longum DJO10A]
gi|227213637|gb|EEI81486.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
longum subsp. infantis ATCC 55813]
gi|239515132|gb|EEQ54999.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
longum subsp. infantis CCUG 52486]
gi|296183371|gb|ADH00253.1| Endopeptidase Clp [Bifidobacterium longum subsp. longum JDM301]
gi|311773940|gb|ADQ03428.1| ClpP2 [Bifidobacterium longum subsp. longum BBMN68]
gi|316916305|gb|EFV37706.1| Clp protease [Bifidobacterium sp. 12_1_47BFAA]
gi|320455721|dbj|BAJ66343.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. longum JCM 1217]
gi|320460226|dbj|BAJ70846.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
longum subsp. infantis 157F]
Length = 207
Score = 171 bits (434), Expect = 5e-41, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 24 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 84 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVRIN 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 144 AELIMDMKKTMSELTAEQTGHTLEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 203
Query: 215 SK 216
+
Sbjct: 204 QQ 205
>gi|291455391|ref|ZP_06594781.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
gi|291358340|gb|EFE85242.1| ATP-dependent Clp protease proteolytic subunit 1 [Streptomyces
albus J1074]
Length = 216
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 83/174 (47%), Positives = 119/174 (68%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL +RIV + Q+++ A +CAQLL L AE+P+ +ISLYINSPGG VTAG+AIYDTM+
Sbjct: 33 LLTQRIVLLGTQVDETSANRVCAQLLLLSAEDPRTDISLYINSPGGSVTAGLAIYDTMRL 92
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG AASMG LL+ G G RFALPNARI++HQPS G G A+DI A+++
Sbjct: 93 IPNDVSTLAMGFAASMGQFLLTVGTAGKRFALPNARIMMHQPSAGIGGSAADIAIQAENL 152
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
KR + + ++ G++ E+ + DRD +A +A ++G+VD+V+ + D+
Sbjct: 153 EFTKRAIERLTAEHTGRSEAEISRDSDRDRWFTAEQAKEYGMVDRVVHTLDDVR 206
>gi|297844106|ref|XP_002889934.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
gi|297335776|gb|EFH66193.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 6/209 (2%)
Query: 14 VFLGL-VPMVVEQT--NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V + + DI++ L +ER++F+ I++ + I A +L+L+ +
Sbjct: 66 KMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLD 125
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ I +Y+N PGG +T +AIYDTM+ +K P+ T C+G A ++ LL+AGEKG RFA+
Sbjct: 126 DSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAM 185
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI+ A+++ +I+ L KN G+ E V K L R
Sbjct: 186 PLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRF 245
Query: 191 SASEACDWGVVDKVLMS---RIDIEEKSK 216
+A EA ++G++DK++ + D + +
Sbjct: 246 NAEEAIEYGLIDKIVRPPRIKEDAPRQDE 274
>gi|18391391|ref|NP_563907.1| CLP2 (CLP PROTEASE PROTEOLYTIC SUBUNIT 2); serine-type
endopeptidase [Arabidopsis thaliana]
gi|75315329|sp|Q9XJ36|CLPR2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 2, chloroplastic; Short=ClpR2;
Short=nClpP2; Flags: Precursor
gi|8778627|gb|AAF79635.1|AC025416_9 F5O11.13 [Arabidopsis thaliana]
gi|5360589|dbj|BAA82066.1| nClpP2 [Arabidopsis thaliana]
gi|17065388|gb|AAL32848.1| similar to nClpP2 [Arabidopsis thaliana]
gi|20148625|gb|AAM10203.1| similar to nClpP2 dbj|BAA82066.1 [Arabidopsis thaliana]
gi|332190755|gb|AEE28876.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 279
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 6/209 (2%)
Query: 14 VFLGL-VPMVVEQT--NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V + + DI++ L +ER++F+ I++ + I A +L+L+ +
Sbjct: 66 KMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLD 125
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ I +Y+N PGG +T +AIYDTM+ +K P+ T C+G A ++ LL+AGEKG RFA+
Sbjct: 126 DSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAM 185
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI+ A+++ +I+ L KN G+ E V K L R
Sbjct: 186 PLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRF 245
Query: 191 SASEACDWGVVDKVLMS---RIDIEEKSK 216
+A EA ++G++DK++ + D + +
Sbjct: 246 NAEEAIEYGLIDKIVRPPRIKEDAPRQDE 274
>gi|63079328|gb|AAY29671.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium breve UCC2003]
Length = 207
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 24 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 84 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVRIN 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 144 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 203
Query: 215 SK 216
+
Sbjct: 204 QQ 205
>gi|301353344|ref|YP_003795605.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
gi|301016262|gb|ADK47549.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
Length = 205
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LY+NSPGG V AG++ YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYVNSPGGAVLAGISAYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++ K++ ++Y + GK + + ++RD +S
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCTTKVYAQRTGKPLWVISEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A EA D+GV D V
Sbjct: 181 AEEAQDYGVADPV 193
>gi|166368460|ref|YP_001660733.1| ATP-dependent Clp protease-like protein [Microcystis aeruginosa
NIES-843]
gi|159028169|emb|CAO89776.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
gi|166090833|dbj|BAG05541.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
Length = 228
Score = 171 bits (433), Expect = 6e-41, Method: Composition-based stats.
Identities = 77/199 (38%), Positives = 122/199 (61%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + +D + LI AQLL+L+ ++P+K I YINS G
Sbjct: 24 DLESLLLKERIVYLGLPLFSSDDVKRNVGVDVTELIIAQLLYLQFDDPEKPIFFYINSTG 83
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IKPP+ T C+GQA +++LSAG KG R +LP+A
Sbjct: 84 TSWYTGDAIGYETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSAGTKGFRASLPHAT 143
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K+ + EI+ KN G+T E++ K +DR ++ +
Sbjct: 144 IVLNQNRTGAQGQATDIQIRAKEVIANKQTMLEIFSKNTGQTTEKLAKDMDRTFYLTPQQ 203
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A D+G++D+VL SR ++ +
Sbjct: 204 AKDYGLIDRVLESRKELPK 222
>gi|217073352|gb|ACJ85035.1| unknown [Medicago truncatula]
Length = 274
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++ T G + D+ S L + RI+F+ + +A + +QL+ L +P +I
Sbjct: 86 PITPAIM--TPGG--ALDLSSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATIDPDADIL 141
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+++PNARI+
Sbjct: 142 MYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGTLLLAGGEKGMRYSMPNARIM 201
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
++QP GF G D+ R + V+ + ++ +++ G+ E+V++ +RD +S SEA
Sbjct: 202 INQPQCGFGGHVEDVRRLVNESVQSRYKMEKMFSAFTGQALEKVQEYTERDSFLSVSEAL 261
Query: 197 DWGVVDKVLMS 207
+ G++D VL +
Sbjct: 262 ELGLIDGVLET 272
>gi|126348492|emb|CAJ90215.1| putative ATP-dependent Clp protease [Streptomyces ambofaciens ATCC
23877]
Length = 211
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 117/195 (60%), Gaps = 2/195 (1%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P E+ + +R D Y++LL+ERIV + I++ A + A+LL+LE P + I+LY+
Sbjct: 11 PEFTERASADDRVVDPYAKLLEERIVLLGTPIDEASANDVTARLLYLEHTAPDRAIALYV 70
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG TA AIYDTM+ + + T C+GQA + ++LL+AG G R LP AR++L Q
Sbjct: 71 NSPGGSFTAMTAIYDTMRHVSCDVETTCLGQAGTAAAVLLAAGTPGRRAVLPGARVMLRQ 130
Query: 140 P--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P G+ D+ A + +I+ RL E+ V++ G+T E+V ++R+ I+ A +A D
Sbjct: 131 PSLIETVEGRTDDLAVRADESTRIRTRLEELLVRHTGRTPEQVTADIERETILDARQALD 190
Query: 198 WGVVDKVLMSRIDIE 212
G+VD ++ R
Sbjct: 191 HGLVDHIVPGRGATP 205
>gi|16209712|gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]
Length = 279
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 71/209 (33%), Positives = 120/209 (57%), Gaps = 6/209 (2%)
Query: 14 VFLGL-VPMVVEQT--NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + P V + + DI++ L +ER++F+ I++ + I A +L+L+ +
Sbjct: 66 KMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATMLYLDTLD 125
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ I +Y+N PGG +T +AIYDTM+ +K P+ T C+G A ++ LL+AGEKG RFA+
Sbjct: 126 GSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGEKGHRFAM 185
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +RI L P+G GQA DI+ A+++ +I+ L KN G+ E V K L R
Sbjct: 186 PLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKDLSRVKRF 245
Query: 191 SASEACDWGVVDKVLMS---RIDIEEKSK 216
+A EA ++G++DK++ + D + +
Sbjct: 246 NAEEAIEYGLIDKIVRPPRIKEDAPRQDE 274
>gi|162463534|ref|NP_001106056.1| LOC100125655 [Zea mays]
gi|150256106|gb|ABR68025.1| PL5L15 [Zea mays]
Length = 292
Score = 171 bits (433), Expect = 7e-41, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 4/201 (1%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + P V +T + DI++ L +ERI+F+ I++ + + A +L+L++ +
Sbjct: 77 MPIGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDNS 136
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYIN PGG +T MA+YDTM +K PI T C+G A ++ +L+AGEKG R +P
Sbjct: 137 KKIMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPL 196
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
RI L P+G GQA DIE A ++++IK L + G + E++ + L R A
Sbjct: 197 CRISLQSPAGAARGQADDIENEANELIRIKDYLYGKLAGHTGHSVEKIHEDLSRVKRFDA 256
Query: 193 SEACDWGVVDKVLM-SRIDIE 212
A ++G++D+++ SRI E
Sbjct: 257 KGALEYGIIDRIVRPSRIKKE 277
>gi|326499826|dbj|BAJ90748.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 117/202 (57%), Gaps = 4/202 (1%)
Query: 15 FLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + P V +T + DI++ L +ERI+F+ I++ + + A +L+L++ +
Sbjct: 53 MMPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSVDD 112
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I LYIN PGG +T MA+YDTM +K PI T C+G A ++ +L+AG+KG R +P
Sbjct: 113 TKKILLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGQKGSRTGMP 172
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
R+ L P+G GQA DIE + ++ +IK L ++ G + E+V + L R
Sbjct: 173 LCRVSLQSPAGAARGQADDIENESNELNRIKNYLYGKLAEHTGHSVEKVHEDLSRSKRFD 232
Query: 192 ASEACDWGVVDKVLM-SRIDIE 212
A A ++G++D+++ SRI E
Sbjct: 233 AEGALEYGIIDRIVRPSRIKKE 254
>gi|28493448|ref|NP_787609.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei
str. Twist]
gi|28572439|ref|NP_789219.1| ATP-dependent Clp protease proteolytic subunit 1 [Tropheryma
whipplei TW08/27]
gi|67460537|sp|Q83G48|CLPP2_TROWT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460540|sp|Q83I19|CLPP1_TROW8 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|28410570|emb|CAD66957.1| ATP-dependent Clp protease proteolytic subunit 1 [Tropheryma
whipplei TW08/27]
gi|28476489|gb|AAO44578.1| ATP-dependent Clp protease proteolytic subunit [Tropheryma whipplei
str. Twist]
Length = 180
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 86/170 (50%), Positives = 123/170 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERIV++ I+D +A ICA++L L A++P+++I LYINSPGG +TAGMAIYD
Sbjct: 8 VFDRLLQERIVWLGEAIDDKLANEICAKILLLNADDPKEDIFLYINSPGGSITAGMAIYD 67
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+ I T +G AASMG +LL++G + R+ +PNAR+LLHQP GF G ASDI+
Sbjct: 68 TMQFVSNDIVTVGIGMAASMGQVLLTSGTQNKRYIMPNARVLLHQPLAGFGGTASDIQTQ 127
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A+ I+ +K RL++I GKT E++ + DRDH +A EA ++G VD +
Sbjct: 128 AKLILDMKYRLSQITASRTGKTVEQIMEDGDRDHWFTAEEALEYGFVDHI 177
>gi|302771047|ref|XP_002968942.1| hypothetical protein SELMODRAFT_90346 [Selaginella moellendorffii]
gi|300163447|gb|EFJ30058.1| hypothetical protein SELMODRAFT_90346 [Selaginella moellendorffii]
Length = 195
Score = 170 bits (432), Expect = 8e-41, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G D+ S +L+ RI+F+ I +A + +QL+ L A + +K+I
Sbjct: 7 PMAPAVI--TPAG--IADLTSIMLRSRIIFIGQPINSQVAQRVISQLVMLAAIDEEKDIQ 62
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYIN PGG + +AIYD M +IKP +ST C G AAS G+L+L+ G KG+RFA+PN+R++
Sbjct: 63 LYINCPGGSTYSVLAIYDCMSWIKPRVSTVCFGMAASQGALILAGGTKGLRFAMPNSRVM 122
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G D+ R ++V + +++++Y G+ E V+ +RDH SA+EA
Sbjct: 123 IHQPQGGCGGTMEDVRRQVNEVVASRDKIDKMYAAFTGQPLEIVQTYTERDHFFSAAEAM 182
Query: 197 DWGVVDKVLMS 207
++G++D +L +
Sbjct: 183 EFGLIDGLLET 193
>gi|46190463|ref|ZP_00206474.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Bifidobacterium longum DJO10A]
gi|291517065|emb|CBK70681.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Bifidobacterium longum subsp. longum F8]
Length = 197
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 74 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 134 AELIMDMKKTMSELTAEQTGHTLEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 193
Query: 215 SK 216
+
Sbjct: 194 QQ 195
>gi|229817803|ref|ZP_04448085.1| hypothetical protein BIFANG_03079 [Bifidobacterium angulatum DSM
20098]
gi|229785592|gb|EEP21706.1| hypothetical protein BIFANG_03079 [Bifidobacterium angulatum DSM
20098]
Length = 207
Score = 170 bits (432), Expect = 9e-41, Method: Composition-based stats.
Identities = 83/175 (47%), Positives = 126/175 (72%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA I AQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 28 IFNRLLKDRIIWMGEEVKDEMANRISAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 87
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G +D+ +
Sbjct: 88 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTTTDVRIN 147
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++G VDK++ +R
Sbjct: 148 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKIITTRD 202
>gi|298243373|ref|ZP_06967180.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
gi|297556427|gb|EFH90291.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
Length = 279
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 80/184 (43%), Positives = 124/184 (67%), Gaps = 4/184 (2%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---T 87
R ++ SRLLKERIVFV I D +A + LL+LE+++ KEISLYIN G +
Sbjct: 95 RINEVPSRLLKERIVFVPPFINDEIANYLIGVLLYLESDDASKEISLYINCHGSLDGNLY 154
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
G+ IYDTM+++KP I+T C+G A + ++LL+AG KG RF LP+++++LHQP GQ
Sbjct: 155 YGLGIYDTMRYLKPEITTVCLGAAQGVAAVLLAAGTKGKRFILPHSQVVLHQPLSSVKGQ 214
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
ASDIE A ++++ ++ L EI ++ GK+ ++V + DR M+A EA ++G+VD+V+
Sbjct: 215 ASDIEIRAHELLRQRQSLYEILAEHTGKSVDQVMQDADRRRYMTAKEAVEYGLVDEVIT- 273
Query: 208 RIDI 211
R ++
Sbjct: 274 REEL 277
>gi|291456561|ref|ZP_06595951.1| Clp protease [Bifidobacterium breve DSM 20213]
gi|291381838|gb|EFE89356.1| Clp protease [Bifidobacterium breve DSM 20213]
Length = 197
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 87/182 (47%), Positives = 129/182 (70%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQLL L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLKDRIIWMGEEVKDDMANRICAQLLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+HQPSGG G A+D+ +
Sbjct: 74 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMHQPSGGIGGTATDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+G VDK++ + I
Sbjct: 134 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALDYGFVDKLVTTPDTIGNN 193
Query: 215 SK 216
+
Sbjct: 194 QQ 195
>gi|23004911|ref|ZP_00048001.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Magnetospirillum magnetotacticum MS-1]
Length = 177
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 103/162 (63%), Positives = 134/162 (82%)
Query: 50 QIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
+ED A+LI AQLLFLEAENP+KEIS YINSPGGVVT+G++IYDTMQFI+ P++T C+G
Sbjct: 12 PLEDQGASLIVAQLLFLEAENPKKEISFYINSPGGVVTSGLSIYDTMQFIRCPVTTLCVG 71
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
QAASMGSLLL+AGE G RFALPNARI++HQPSGGF GQA+DI HA++I +K+RLNEIY
Sbjct: 72 QAASMGSLLLAAGEAGHRFALPNARIMVHQPSGGFQGQATDILIHAREIEALKKRLNEIY 131
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
VK+ G+ YE + + L+RD+ M+A A ++G++D +L R +
Sbjct: 132 VKHTGRDYETIHQALERDNFMTADAAKEFGLIDDILHKRPET 173
>gi|183179518|ref|ZP_02957729.1| Clp protease [Vibrio cholerae MZO-3]
gi|183012929|gb|EDT88229.1| Clp protease [Vibrio cholerae MZO-3]
Length = 156
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 108/158 (68%), Positives = 130/158 (82%), Gaps = 2/158 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K +F LVPMVVEQT+RGERSYDIYSRLLKER++F+TGQ+EDHMA L+
Sbjct: 1 MSYQ--EKNAMSPIFDALVPMVVEQTSRGERSYDIYSRLLKERVIFLTGQVEDHMANLVV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQLLFLE+ENP K+I LYINSPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQLLFLESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLA 118
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+
Sbjct: 119 GGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEF 156
>gi|213160794|ref|ZP_03346504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 155
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 95/155 (61%), Positives = 127/155 (81%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
MA LI AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQAASM
Sbjct: 1 MANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
G+ LL+AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE+ + G
Sbjct: 61 GAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNELMAHHTG 120
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ E++E+ +RD +SA EA ++G+VD +L R
Sbjct: 121 QSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 155
>gi|239932647|ref|ZP_04689600.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291441006|ref|ZP_06580396.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
gi|291343901|gb|EFE70857.1| ATP-dependent Clp protease [Streptomyces ghanaensis ATCC 14672]
Length = 211
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P + E+T G R+ D Y++LL+ERIV + I++ A + AQ L+LE P ++ISL
Sbjct: 9 VLPELTERTASGHRTTDPYAKLLQERIVLLGTPIDETSANDVMAQFLYLEHRAPDRDISL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+NSPGG A IYDT++F+ + T C+G+A +LLL+AG G R LP AR++L
Sbjct: 69 YVNSPGGSFHAMSTIYDTLRFVSCDVETVCLGRAEGTAALLLAAGTPGKRCVLPGARLVL 128
Query: 138 HQ--PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
Q PSG G+ASD+ A+++ +I+ R+ ++ V++ G+T E+ L+RD ++ A A
Sbjct: 129 RQPDPSGPLEGRASDLAARAEELGRIRSRMEDMLVRHAGRTPEQARADLERDTVLDARAA 188
Query: 196 CDWGVVDKVLMSR 208
D G+ D+++ R
Sbjct: 189 VDHGLADRIVPDR 201
>gi|307152498|ref|YP_003887882.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982726|gb|ADN14607.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 222
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 78/199 (39%), Positives = 121/199 (60%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + +D + LI AQLLFL+ ++P K I YINS G
Sbjct: 18 DLESLLLKERIVYLGMPLFSSDDIKQQVGIDVTQLIIAQLLFLQFDDPDKPIYFYINSTG 77
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IKPP+ T C+GQA +++LSAG KG R +LP+A
Sbjct: 78 TSWYTGDAIGFETEAFAICDTINYIKPPVHTICIGQAMGTAAMILSAGTKGCRASLPHAT 137
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ KR + EI+ KN G+ E++ K LDR ++ ++
Sbjct: 138 IVLNQNRTGAQGQATDIQIRAKEVLANKRTMLEIFSKNTGQAIEKLAKDLDRTFYLTPAQ 197
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL SR ++ +
Sbjct: 198 AKEYGLIDRVLESRKELPK 216
>gi|302780906|ref|XP_002972227.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
gi|300159694|gb|EFJ26313.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
Length = 271
Score = 170 bits (431), Expect = 1e-40, Method: Composition-based stats.
Identities = 64/212 (30%), Positives = 119/212 (56%), Gaps = 6/212 (2%)
Query: 11 SEDVFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ + + P V +T + DI++ L +ERI+F+ I++ + A +L+L+
Sbjct: 54 AQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHIDEEFGNQVLATMLYLD 113
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + K++ Y++ PGG +T MAIYDTM +K + T +G A ++ LL+AGEKG+R
Sbjct: 114 SVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYAYNIAGFLLAAGEKGLR 173
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++P RI + P G G+A+DI+ A+++ +++ L + G+ E++ K R
Sbjct: 174 TSMPLTRIAMQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAVKTGQPEEKIHKDFSRI 233
Query: 188 HIMSASEACDWGVVDKVL---MSRIDIEEKSK 216
SA EA D+G++DK++ + D K++
Sbjct: 234 KRFSAQEALDYGLIDKIIRPPTVKPDASSKAE 265
>gi|168701666|ref|ZP_02733943.1| ATP-dependent Clp protease proteolytic subunit [Gemmata
obscuriglobus UQM 2246]
Length = 208
Score = 170 bits (430), Expect = 1e-40, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 124/173 (71%), Gaps = 1/173 (0%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
++RI+F+ I + +ATL+ QLL+LE E ++ISLYINSPGG V+A +AIYDTMQF++
Sbjct: 37 EQRIIFLNWPINNDVATLVIKQLLYLEYEKKSEDISLYINSPGGSVSATLAIYDTMQFMQ 96
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
PI+TFCMG AAS ++LL+AG R+A+PN+++++HQP G GQ SDIE A +I++
Sbjct: 97 SPINTFCMGLAASGAAVLLAAGSPKKRYAMPNSKVMIHQPYGQVGGQVSDIEIQANEILR 156
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ RLNEI K+ G+ E + + DRD A EA +G+VD+VL+ R ++++
Sbjct: 157 ERGRLNEILAKHTGQPVEIIARETDRDKYYHADEAKAFGLVDEVLV-RPELKK 208
>gi|255557703|ref|XP_002519881.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223540927|gb|EEF42485.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 294
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 86/194 (44%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 18 LVPMVVE-QTN----RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L P QT RG S D LL+ERIVF+ I+D +A +QLL L+A++P
Sbjct: 61 LTPQFTAPQTPATAMRGAES-DAMGLLLRERIVFLGNNIDDFVADATISQLLLLDAQDPT 119
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I L+IN PGG ++A MAIYD +Q ++ +ST +G +AS S++L G KG RFA+PN
Sbjct: 120 KDIRLFINCPGGSLSATMAIYDVVQLVRADVSTVALGISASTASIILGGGTKGKRFAMPN 179
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
RI++HQP GG SGQA D+E A++I+ K + I G+T E+V K +DRD MS
Sbjct: 180 TRIMVHQPLGGASGQAIDVEIQAREIMHNKNNVVRIISGFTGRTVEQVLKDIDRDRYMSP 239
Query: 193 SEACDWGVVDKVLM 206
EA ++G++D V+
Sbjct: 240 IEAVEYGIIDGVID 253
>gi|11466727|ref|NP_039323.1| ATP-dependent Clp protease proteolytic subunit [Marchantia
polymorpha]
gi|116525|sp|P12208|CLPP_MARPO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|456519|emb|CAA28109.1| unnamed protein product [Marchantia polymorpha]
Length = 203
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 78/202 (38%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRIDIE 212
A EA +G+VD V + + I+
Sbjct: 181 AKEAKLYGIVDLVAIENNSTIK 202
>gi|313183906|ref|YP_004021760.1| clp protease proteolytic subunit [Equisetum arvense]
gi|281371626|gb|ADA63559.1| clp protease proteolytic subunit [Equisetum arvense]
Length = 204
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 127/200 (63%), Gaps = 5/200 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ LYINSPGG V G+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 RDLYLYINSPGGAVLPGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP S + GQA + A++I K++ + ++YV+ GK V + ++RD MS
Sbjct: 121 ARIMIHQPASSYYDGQAGECVLEAEEISKLRDCITKVYVQRTGKPLRVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRID 210
A EA D+G++D V + S D
Sbjct: 181 AEEARDYGLIDLVAIDSSSD 200
>gi|289448104|ref|ZP_06437848.1| LOW QUALITY PROTEIN: ATP-dependent clp protease proteolytic subunit
2 clpP2 [Mycobacterium tuberculosis CPHL_A]
gi|289421062|gb|EFD18263.1| LOW QUALITY PROTEIN: ATP-dependent clp protease proteolytic subunit
2 clpP2 [Mycobacterium tuberculosis CPHL_A]
Length = 200
Score = 169 bits (429), Expect = 2e-40, Method: Composition-based stats.
Identities = 82/166 (49%), Positives = 113/166 (68%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y RLL ERI+F+ ++ D +A +CAQ+L L AE+ K+ISLYINSPGG ++AGMAIYD
Sbjct: 20 VYERLLSERIIFLGSEVNDEIANRLCAQILLLAAEDASKDISLYINSPGGSISAGMAIYD 79
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM I+T+ MG AASMG LL+AG KG R+ALP+ARIL+HQP GG +G A+DI
Sbjct: 80 TMVLAPCDIATYAMGMAASMGEFLLAAGTKGKRYALPHARILMHQPLGGVTGSAADIAIQ 139
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
A+ IK+ + + + G+ E +E DRD +A+EA ++G
Sbjct: 140 AEQFAVIKKEMFRLNAEFTGQPIERIEADSDRDRWFTAAEALEYGF 185
>gi|218245804|ref|YP_002371175.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8801]
gi|257058850|ref|YP_003136738.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 8802]
gi|16506759|gb|AAL23932.1|AF423176_1 hypothetical protein [Cyanothece sp. PCC 8801]
gi|218166282|gb|ACK65019.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
gi|256589016|gb|ACU99902.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 226
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 118/199 (59%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S +LKERI+++ + +D + LI AQLL+L+ ++P K I YINS G
Sbjct: 22 DLESLMLKERIIYLGMPLFSSDDVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTG 81
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM ++KPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 82 TSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K+ + EI+ KN G+ E++ K DR ++ +
Sbjct: 142 IVLNQNRSGARGQATDIQIRAKEVLSNKQTMLEIFSKNTGQPVEKIAKDTDRTFYLTPQQ 201
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL S ++ +
Sbjct: 202 AKEYGLIDRVLESTKELPK 220
>gi|126657895|ref|ZP_01729048.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620835|gb|EAZ91551.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 226
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 118/199 (59%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVT----------GQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERI+++ Q+ + LI AQLL+L+ +NP K I YINS G
Sbjct: 22 DLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPDKPIFFYINSTG 81
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM ++KPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 82 TSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K+ + +I +N G+T E++ K +DR ++ +
Sbjct: 142 IVLNQNRSGARGQATDIQIRAKEVLHNKQTMLQILSQNTGQTPEKIAKDIDRTFYLTPEK 201
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL S ++ +
Sbjct: 202 AKEYGLIDRVLESTKELPK 220
>gi|119025605|ref|YP_909450.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
adolescentis ATCC 15703]
gi|118765189|dbj|BAF39368.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
adolescentis ATCC 15703]
Length = 206
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 24 IFNRLLKDRIIWMGEEVKDEMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 83
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +
Sbjct: 84 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTATDVRIN 143
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++G VDK++ +
Sbjct: 144 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVST 196
>gi|320012153|gb|ADW07003.1| Endopeptidase Clp [Streptomyces flavogriseus ATCC 33331]
Length = 211
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T G R+ D Y++LL ERIVF+ ++D AT + AQ ++LE +P + +SL
Sbjct: 9 VLPEFTERTAHGTRNTDPYAKLLSERIVFLGTPVDDTAATDLVAQFMYLEHADPDRPLSL 68
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG A AIYDTM F+ + TFC+GQA + ++LL+AG G R ALP AR+L+
Sbjct: 69 YINSPGGSFDAMTAIYDTMGFLACEVETFCLGQAGAAAAVLLAAGSPGRRHALPGARVLI 128
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP+ GQ SD+E A+++ + + L + ++ G++ E + ++RD I+ A A
Sbjct: 129 QQPALDEPVQGQPSDLEIRARELTRERELLTSLLARHTGRSTERISADIERDTILDAEAA 188
Query: 196 CDWGVVDKVLMSRI 209
+G+VD V+ +R
Sbjct: 189 LAFGLVDHVMENRT 202
>gi|172036825|ref|YP_001803326.1| ATP-dependent Clp protease-like protein [Cyanothece sp. ATCC 51142]
gi|171698279|gb|ACB51260.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
Length = 226
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 119/200 (59%), Gaps = 19/200 (9%)
Query: 34 DIYSRLLKERIVFVT----------GQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERI+++ Q+ + LI AQLL+L+ +NP+K I YINS G
Sbjct: 22 DLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPIYFYINSTG 81
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM ++KPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 82 TSWYTGDAIGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K+ + +I +N G+T E++ K +DR ++ +
Sbjct: 142 IVLNQNRSGARGQATDIQIRAKEVLHNKQTMLQILSENTGQTVEKIAKDIDRTFYLTPEK 201
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A ++G++D+VL S ++ +
Sbjct: 202 AKEYGLIDRVLESTKELPKS 221
>gi|22711907|ref|NP_683797.1| ATP-dependent Clp protease proteolytic subunit [Chaetosphaeridium
globosum]
gi|25008304|sp|Q8M9Y9|CLPP_CHAGL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22416911|gb|AAM96511.1| proteolytic subunit 2 of clp protease [Chaetosphaeridium globosum]
Length = 201
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + D+Y+RL +ERI+F+ + +A I +L+L ++
Sbjct: 1 MPVGVPKVPYRLPGDVQVQWIDLYNRLYRERILFLGQTVNYEIANQIIGLMLYLNGDDKS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V G+AIYDTMQF++P I T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVVPGIAIYDTMQFVEPEIRTICMGVAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + QA ++ A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPSSSYYKDQAGELIMEAEEVLKLRDCITKVYVQRTGKPISVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD V
Sbjct: 181 AKEAKEYGIVDLV 193
>gi|258564300|ref|XP_002582895.1| clp protease [Uncinocarpus reesii 1704]
gi|237908402|gb|EEP82803.1| clp protease [Uncinocarpus reesii 1704]
Length = 222
Score = 169 bits (427), Expect = 3e-40, Method: Composition-based stats.
Identities = 95/176 (53%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERI+ + G++++ ++ I AQLLFLEA+NP+K+ISLYINSPGG VTAG+AIYDTM +I+
Sbjct: 45 ERIICLNGEVDESVSASIVAQLLFLEADNPEKQISLYINSPGGSVTAGLAIYDTMTYIQS 104
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+GQAASMGSLLL GE G RF LP++ I++HQPSGG+ GQA+DI HA++I+++
Sbjct: 105 PVSTICIGQAASMGSLLLCGGEPGKRFCLPHSSIMIHQPSGGYFGQATDIAIHAKEILRV 164
Query: 162 KRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+++LNEIY ++ K + +E+EK ++RD+ M ASEA G+VD ++ R +E+
Sbjct: 165 RKQLNEIYKRHLTKEISLDEIEKLMERDYFMGASEALGMGIVDGIMDRRTKSKEEE 220
>gi|116786219|gb|ABK24027.1| unknown [Picea sitchensis]
Length = 317
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 75/174 (43%), Positives = 114/174 (65%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ LL++RIVF+ ++D +A I +QLL L+A+NP K+I L+IN PGG + A M I+
Sbjct: 104 DVMGLLLRQRIVFLGSNMDDFVADAIISQLLLLDAQNPNKDIRLFINCPGGSINAAMGIF 163
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DT+Q + +ST G AAS S++L+ G KG R A+PN RI++HQP GG SG A D+E
Sbjct: 164 DTIQLCRADVSTIAFGLAASTASIVLAGGSKGKRLAMPNTRIMMHQPLGGASGSAIDVEI 223
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A++I+ K + I + G++ E+V+ +DRD MS EA ++G++D V+
Sbjct: 224 QAKEIMYHKSNVTRIISERTGRSTEQVDNDMDRDRYMSPMEAVEYGLIDGVIDK 277
>gi|270283864|ref|ZP_05965115.2| Clp protease [Bifidobacterium gallicum DSM 20093]
gi|270277585|gb|EFA23439.1| Clp protease [Bifidobacterium gallicum DSM 20093]
Length = 196
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 86/181 (47%), Positives = 126/181 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLL++RI+++ +++D MA ICAQ+L L AE+P K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLQDRIIWMGEEVKDEMANRICAQMLMLAAEDPDKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ IKP ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G +D+ +
Sbjct: 74 TMQLIKPDVATVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTTTDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ L E+ + G T EE+ + + DH +A EA ++G VDK++ + + K
Sbjct: 134 AELIMNMKKTLAELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVSTPDTMHSK 193
Query: 215 S 215
Sbjct: 194 E 194
>gi|193237752|dbj|BAG50149.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
gi|193237765|dbj|BAG50156.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
Length = 204
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ ++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWIISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 AEEAKVYGIVDFV 193
>gi|194476660|ref|YP_002048839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paulinella
chromatophora]
gi|171191667|gb|ACB42629.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paulinella
chromatophora]
Length = 193
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 112/173 (64%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL+ ERI+F+ + + I QLL LEA++ +K+I LYINSPGG V G+ I DTMQ
Sbjct: 21 RLMDERIIFLGEAVTAEVTNRIVTQLLLLEADDSEKDIYLYINSPGGSVYDGLGILDTMQ 80
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
IKP + T C+G AASMG+ LL+AG KG R +L N+RI++HQPSGG GQASD+ A +
Sbjct: 81 HIKPDVYTVCVGLAASMGAFLLAAGTKGKRCSLFNSRIMIHQPSGGIRGQASDMRIQANE 140
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
I +K RLN GK+ +VE DRD MSA A +G++DKV+ R
Sbjct: 141 ITYLKHRLNLELSNFTGKSLHQVEGDTDRDFFMSAYSAKAYGLIDKVVSRRPK 193
>gi|111018525|ref|YP_701497.1| endopeptidase Clp [Rhodococcus jostii RHA1]
gi|226360644|ref|YP_002778422.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
gi|116243124|sp|Q0SGJ7|CLPP3_RHOSR RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|110818055|gb|ABG93339.1| endopeptidase Clp [Rhodococcus jostii RHA1]
gi|226239129|dbj|BAH49477.1| ATP-dependent Clp protease proteolytic subunit [Rhodococcus opacus
B4]
Length = 202
Score = 168 bits (426), Expect = 4e-40, Method: Composition-based stats.
Identities = 76/177 (42%), Positives = 116/177 (65%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ RL ++R + +TG+++D MA C++L+ L A +P+++I LYINSPGG V AG+AIYD
Sbjct: 15 LADRLFRQRTILLTGEVDDAMAERACSELVLLAAADPKRDIVLYINSPGGSVFAGLAIYD 74
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM+ + + T MG AASMG +LL +G G R +L ++RI++HQPS G G A DI
Sbjct: 75 TMKLVPNDVVTVAMGFAASMGQVLLCSGTHGKRISLAHSRIMMHQPSAGIGGTAVDIAIQ 134
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A+ + ++KR+ EI G E++ + DRD +A EA D+G+VD+V+ S +I
Sbjct: 135 AESLERMKRQSQEILAAETGHPVEQIAEDSDRDRWFTADEARDYGIVDRVVSSFAEI 191
>gi|226309396|ref|YP_002769356.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
gi|226188513|dbj|BAH36617.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodococcus
erythropolis PR4]
Length = 202
Score = 168 bits (426), Expect = 5e-40, Method: Composition-based stats.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 26 TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
T+ G R + RL ++R + +TG++ D MA +C++L+ L +P+++I LYINSPGG
Sbjct: 7 TDTGYRDL-LTDRLFRQRTILLTGEVNDAMAERVCSELVLLATTDPKRDIVLYINSPGGS 65
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
V AG+AIYDTM+ I + T MG AASMG +LL +G G R +L ++RI++HQPS G
Sbjct: 66 VFAGLAIYDTMKLIPNDVVTVAMGFAASMGQVLLCSGTHGKRISLAHSRIMMHQPSAGIG 125
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G A DI A+ + +KR+ EI G+T EE+E DRD +A +A ++G+VD+V+
Sbjct: 126 GTAVDIAIQAESLELMKRQSQEILAAETGRTVEEIETDSDRDRWFTAEQAREYGIVDRVV 185
Query: 206 MSRIDIEEKS 215
S +I ++
Sbjct: 186 TSFAEIAPQA 195
>gi|4098214|gb|AAD09579.1| ATP-dependent Clp protease proteolytic subunit [Helicobacter
pylori]
Length = 159
Score = 168 bits (425), Expect = 5e-40, Method: Composition-based stats.
Identities = 89/159 (55%), Positives = 123/159 (77%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
D +A+ I AQLLFLEAE+P+K+I LYINSPGGV+T+G++IYDTM FI+P +ST C+GQA
Sbjct: 1 NDSVASSIVAQLLFLEAEDPEKDIGLYINSPGGVITSGLSIYDTMNFIRPDVSTICIGQA 60
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
ASMG+ LLS G KG RF+LP++RI++HQP GG GQASDIE + +I+++K +N I +
Sbjct: 61 ASMGAFLLSCGAKGKRFSLPHSRIMIHQPLGGAQGQASDIEIISNEILRLKGLMNSILAQ 120
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
N G++ E++ K DRD MSA EA ++G++DKVL +
Sbjct: 121 NSGQSLEQIAKDTDRDFYMSAKEAKEYGLIDKVLQKNVK 159
>gi|229822177|ref|YP_002883703.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
gi|229568090|gb|ACQ81941.1| Endopeptidase Clp [Beutenbergia cavernae DSM 12333]
Length = 205
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 79/185 (42%), Positives = 111/185 (60%), Gaps = 4/185 (2%)
Query: 24 EQTNRGERSYD--IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS 81
EQT R D + SRLL +RI+ + ++D + +CAQLL L AE+P+ +ISL+INS
Sbjct: 4 EQTPT--RPLDDELASRLLHQRIIVLGTGLDDVVGNRLCAQLLLLSAEDPRADISLWINS 61
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
PGG V A +AI+D M+ I +ST MG A S G LLSAG G RFAL +AR+LLHQ S
Sbjct: 62 PGGSVPAMLAIHDVMRLIPNDVSTLAMGMAYSAGQFLLSAGTPGKRFALEHARVLLHQGS 121
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G G A DIE A D+ + + + + G+ + V + RD +A EA ++G +
Sbjct: 122 AGIGGTALDIEVQADDLRHTRDTVLGLIAAHTGQPIDRVAEDSQRDRYFTADEALEYGFI 181
Query: 202 DKVLM 206
D+V+
Sbjct: 182 DRVVT 186
>gi|183601398|ref|ZP_02962768.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis HN019]
gi|219683455|ref|YP_002469838.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis AD011]
gi|241191102|ref|YP_002968496.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|241196508|ref|YP_002970063.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|183219004|gb|EDT89645.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis HN019]
gi|219621105|gb|ACL29262.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis AD011]
gi|240249494|gb|ACS46434.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis Bl-04]
gi|240251062|gb|ACS48001.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis DSM 10140]
gi|289178846|gb|ADC86092.1| ClpP [Bifidobacterium animalis subsp. lactis BB-12]
gi|295794091|gb|ADG33626.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
animalis subsp. lactis V9]
Length = 204
Score = 168 bits (425), Expect = 6e-40, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 126/182 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+ +I LYINSPGG +TAGMAIYD
Sbjct: 23 IFNRLLKDRIIWLGEEVKDDMANRICAQMLMLAAEDPKSDIWLYINSPGGSITAGMAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G +D+ +
Sbjct: 83 TMQLIEPDVATVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTTTDVRIN 142
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
A+ I+ +K+ L E+ + G T EE+ + + DH +A EA ++G VDK++ + +
Sbjct: 143 AELIMDMKKTLGELTAEQTGHTIEEIYRDNEYDHWFTAEEALEYGFVDKLVSTHETMNSD 202
Query: 215 SK 216
+
Sbjct: 203 KE 204
>gi|212716950|ref|ZP_03325078.1| hypothetical protein BIFCAT_01894 [Bifidobacterium catenulatum DSM
16992]
gi|225352779|ref|ZP_03743802.1| hypothetical protein BIFPSEUDO_04409 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|212660235|gb|EEB20810.1| hypothetical protein BIFCAT_01894 [Bifidobacterium catenulatum DSM
16992]
gi|225156386|gb|EEG69955.1| hypothetical protein BIFPSEUDO_04409 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 196
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLKDRIIWMGEEVKDEMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +
Sbjct: 74 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTATDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++G VDK++ +
Sbjct: 134 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVST 186
>gi|154487067|ref|ZP_02028474.1| hypothetical protein BIFADO_00905 [Bifidobacterium adolescentis
L2-32]
gi|154084930|gb|EDN83975.1| hypothetical protein BIFADO_00905 [Bifidobacterium adolescentis
L2-32]
Length = 196
Score = 167 bits (424), Expect = 6e-40, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLKDRIIWMGEEVKDEMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +
Sbjct: 74 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTATDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++G VDK++ +
Sbjct: 134 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVST 186
>gi|302816621|ref|XP_002989989.1| hypothetical protein SELMODRAFT_130729 [Selaginella moellendorffii]
gi|300142300|gb|EFJ09002.1| hypothetical protein SELMODRAFT_130729 [Selaginella moellendorffii]
Length = 203
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 74/190 (38%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P V+ T G D+ S +L+ RI+F+ I +A + +QL+ L A + +K+I L
Sbjct: 16 MAPAVI--TPAG--IADLTSIMLRSRIIFIGQPINSQVAQRVISQLVMLAAIDEEKDIQL 71
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YIN PGG + +AIYD M +IKP + T C G AAS G+L+L+ G KG+RFA+PN+R+++
Sbjct: 72 YINCPGGSTYSVLAIYDCMSWIKPRVGTVCFGMAASQGALILAGGTKGLRFAMPNSRVMI 131
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP GG G D+ R ++V + +++++Y G+ E V+ +RDH SA+EA +
Sbjct: 132 HQPQGGCGGTMEDVRRQVNEVVASRDKIDKMYSAFTGQPLEIVQTYTERDHFFSAAEAME 191
Query: 198 WGVVDKVLMS 207
+G++D +L +
Sbjct: 192 FGLIDGLLET 201
>gi|255646657|gb|ACU23802.1| unknown [Glycine max]
Length = 273
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 71/191 (37%), Positives = 112/191 (58%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G D+ S L + RI+F+ + +A + +QL+ L N +I
Sbjct: 85 PITPAVM--TPGGP--LDLTSVLFRNRIIFIGQPVNSQVAQRVISQLVTLATINENADIL 140
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG + +AIYD M +IKP + T C G AAS G+L L+ GEKGMR+A+PNARI
Sbjct: 141 VYINCPGGSTYSVLAIYDCMSWIKPKVGTVCFGVAASQGALFLAGGEKGMRYAMPNARIT 200
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP G G D+ R + V+ + +++++Y G+ E+V++ +RD + EA
Sbjct: 201 IHQPQSGCGGHVEDVRRQVNEAVQSRHKIDKMYSVFTGQPLEKVQQYTERDRFLFVFEAL 260
Query: 197 DWGVVDKVLMS 207
++G +D VL +
Sbjct: 261 EFGFIDGVLET 271
>gi|218672848|ref|ZP_03522517.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
GR56]
Length = 194
Score = 167 bits (424), Expect = 7e-40, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMVKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPKERRICLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAAATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|5360593|dbj|BAA82068.1| nClpP4 [Arabidopsis thaliana]
Length = 299
Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 77 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 135
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++A MAIYD +Q ++ +ST +G AAS S++L AG KG RFA+PN RI++HQP GG
Sbjct: 136 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 195
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SGQA D+E A++++ K + I +++E+V K +DRD MS EA ++G++D
Sbjct: 196 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 255
Query: 204 VLM 206
V+
Sbjct: 256 VID 258
>gi|218461627|ref|ZP_03501718.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli Kim
5]
Length = 194
Score = 167 bits (424), Expect = 8e-40, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDD-DIRIYVNSPGGHVESGDSIHDMVKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I + G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAEATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|67921361|ref|ZP_00514879.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67856473|gb|EAM51714.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 226
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 75/200 (37%), Positives = 120/200 (60%), Gaps = 19/200 (9%)
Query: 34 DIYSRLLKERIVFVT----------GQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERI+++ Q+ + LI AQLL+L+ +NP+K I YINS G
Sbjct: 22 DLESLLLKERIIYLGLPLFSSDEIKQQVGIDVTQLIIAQLLYLQFDNPEKPIYFYINSTG 81
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM +IKPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 82 TSWYTGDAIGFETEAFAICDTMNYIKPPIHTICIGQAMGTAAMILSAGTKGCRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A+++++ K+ + I +N G+T E++ K +DR ++ ++
Sbjct: 142 IVLNQNRSGAQGQATDIQIRAKEVLQNKQTMLTILAENTGQTAEKIAKDIDRTFYLTPAK 201
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A ++G++D+VL S ++ +
Sbjct: 202 AKEYGLIDRVLESTKELPKA 221
>gi|115483692|ref|NP_001065516.1| Os10g0580800 [Oryza sativa Japonica Group]
gi|12039365|gb|AAG46151.1|AC018727_3 putative Clp protease [Oryza sativa Japonica Group]
gi|31433719|gb|AAP55198.1| ATP-dependent Clp protease proteolytic subunit 3, putative,
expressed [Oryza sativa Japonica Group]
gi|113640048|dbj|BAF27353.1| Os10g0580800 [Oryza sativa Japonica Group]
gi|215737516|dbj|BAG96646.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737683|dbj|BAG96813.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737745|dbj|BAG96875.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740822|dbj|BAG96978.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222613342|gb|EEE51474.1| hypothetical protein OsJ_32613 [Oryza sativa Japonica Group]
Length = 293
Score = 167 bits (423), Expect = 8e-40, Method: Composition-based stats.
Identities = 81/173 (46%), Positives = 117/173 (67%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ LL+ERIVF+ +IED +A + +QLL L+A +P +I L++NSPGG ++A MAIY
Sbjct: 80 DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAVDPNSDIRLFVNSPGGSLSATMAIY 139
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ ++ +ST +G A S S++L G KG RFA+PN RI++HQP GG SGQA D+E
Sbjct: 140 DVMQLVRADVSTIGLGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEV 199
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++I+ KR + + G+T E+VEK +DRD M EA D+G++D V+
Sbjct: 200 QAKEILTNKRNVIRLISGFTGRTPEQVEKDIDRDRYMGPLEAVDYGLIDSVID 252
>gi|108796785|ref|YP_636436.1| ATP-dependent Clp protease proteolytic subunit [Staurastrum
punctulatum]
gi|122211785|sp|Q32RU0|CLPP_STAPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393553|gb|AAX45694.1| proteolytic subunit 2 of clp protease [Staurastrum punctulatum]
Length = 201
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 125/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ ++D +A + +++L E+
Sbjct: 1 MPIGVPRVPFRLPGEEEAVWVDVYNRLYRERLLFLGQNVDDEIANQLIGIMIYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ +YINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDCITKVYVQRTGKPAWLISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD V
Sbjct: 181 AKEAQEYGIVDLV 193
>gi|171743309|ref|ZP_02919116.1| hypothetical protein BIFDEN_02440 [Bifidobacterium dentium ATCC
27678]
gi|306823254|ref|ZP_07456630.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
dentium ATCC 27679]
gi|309801909|ref|ZP_07696024.1| endopeptidase Clp [Bifidobacterium dentium JCVIHMP022]
gi|171278923|gb|EDT46584.1| hypothetical protein BIFDEN_02440 [Bifidobacterium dentium ATCC
27678]
gi|304553886|gb|EFM41797.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
dentium ATCC 27679]
gi|308221465|gb|EFO77762.1| endopeptidase Clp [Bifidobacterium dentium JCVIHMP022]
Length = 196
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 85/173 (49%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 14 IFNRLLKDRIIWMGEEVKDDMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +
Sbjct: 74 TMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTATDVRIN 133
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++G VDK++ +
Sbjct: 134 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVST 186
>gi|87125531|ref|ZP_01081376.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
gi|86166831|gb|EAQ68093.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
RS9917]
Length = 211
Score = 167 bits (423), Expect = 9e-40, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 120/198 (60%), Gaps = 19/198 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S +LKERIV++ + +D + LI AQLL+LE +NP K I YINS G
Sbjct: 7 DLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPDKPIYFYINSTG 66
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A
Sbjct: 67 TSWYTGDAIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHAS 126
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+LHQP G GQA+DI+ A++++ KR + EI +N G++ E++ K DR ++ +
Sbjct: 127 IVLHQPRSGARGQATDIQIRAKEVLHNKRAMLEILSENTGRSVEQLAKDSDRMSYLTPEQ 186
Query: 195 ACDWGVVDKVLMSRIDIE 212
A ++G++D+VL SR ++
Sbjct: 187 AVEYGLIDRVLGSRKELP 204
>gi|226494171|ref|NP_001140458.1| hypothetical protein LOC100272517 [Zea mays]
gi|194699596|gb|ACF83882.1| unknown [Zea mays]
gi|195624444|gb|ACG34052.1| ATP-dependent Clp protease proteolytic subunit 1 [Zea mays]
Length = 289
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 117/173 (67%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ LL+ERIVF+ +IED +A + +QLL L+A +P +I L++NSPGG ++A MAIY
Sbjct: 76 DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIY 135
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ ++ +ST MG A S S++L G KG RFA+PN RI++HQP GG SGQA D+E
Sbjct: 136 DVMQLVRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEV 195
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++I+ KR + I G+T E+VEK +DRD M EA D+G++D V+
Sbjct: 196 QAKEILTNKRNVIRIVSGFTGRTPEQVEKDIDRDRYMGPLEAVDYGLIDGVID 248
>gi|86358671|ref|YP_470563.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CFN
42]
gi|116243121|sp|Q2K5Q0|CLPP3_RHIEC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|86282773|gb|ABC91836.1| endopeptidase Clp, subunit 3 protein [Rhizobium etli CFN 42]
Length = 194
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMVKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A + R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPRERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I + G+ E++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAEATGQPLEKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|113170419|ref|YP_717211.1| ClpP [Ostreococcus tauri]
gi|122228950|sp|Q0P3P4|CLPP_OSTTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112806826|emb|CAL36333.1| ClpP [Ostreococcus tauri]
Length = 200
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 127/196 (64%), Gaps = 5/196 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +L+L AE+
Sbjct: 1 MPIGVPKVAYRLP-GESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDA 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+ + LYINSPGG VTAG++++D M +++ ++T +G AASM S +L+ GE+G R ALP
Sbjct: 60 SRSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ R+++HQP GG GQAS++ ++IV+++R + +YV G+ + LDRD +S
Sbjct: 120 HCRVMIHQPQGGMEGQASEVVLEKEEIVRLRRLIGRLYVDLTGQPLSTIANDLDRDKYLS 179
Query: 192 ASEACDWGVVDKVLMS 207
A EA ++G+VD V +
Sbjct: 180 AREAREYGLVDLVATT 195
>gi|18860336|ref|NP_569653.1| ATP-dependent Clp protease proteolytic subunit [Psilotum nudum]
gi|22653694|sp|Q8WHZ7|CLPP_PSINU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18389489|dbj|BAB84241.1| ATP-dependent protease [Psilotum nudum]
Length = 198
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ YINSPGG V G+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 RDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++I+K++ + +Y + K + + ++RD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEILKLRDCITRVYAQRTEKPLWVISEDMERDIFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD +
Sbjct: 181 AKEARAYGIVDLI 193
>gi|224283329|ref|ZP_03646651.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
bifidum NCIMB 41171]
gi|310287699|ref|YP_003938957.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
bifidum S17]
gi|311064597|ref|YP_003971322.1| ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
bifidum PRL2010]
gi|313140481|ref|ZP_07802674.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
bifidum NCIMB 41171]
gi|309251635|gb|ADO53383.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
bifidum S17]
gi|310866916|gb|ADP36285.1| Clp ATP-dependent Clp protease proteolytic subunit [Bifidobacterium
bifidum PRL2010]
gi|313132991|gb|EFR50608.1| ATP-dependent Clp protease proteolytic subunit 2 [Bifidobacterium
bifidum NCIMB 41171]
Length = 203
Score = 167 bits (423), Expect = 1e-39, Method: Composition-based stats.
Identities = 84/173 (48%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I++RLLK+RI+++ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYD
Sbjct: 23 IFNRLLKDRIIWMGEEVKDDMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+HQPSGG G +D+ +
Sbjct: 83 TMQLIQPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTTTDVRIN 142
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ ++E+ + G T EE+ + + DH +A+EA ++G VDK++ +
Sbjct: 143 AELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTATEALEYGFVDKIITT 195
>gi|242910145|ref|YP_002970669.1| Clp protease proteolytic subunit [Alsophila spinulosa]
gi|218454814|gb|ACK77151.1| Clp protease proteolytic subunit [Alsophila spinulosa]
Length = 200
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER+ + Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLPLLGQQVDDEIANQLIGIMMYLNGEDEA 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ LY+NSPGG V AG+++YD MQF+ P + T CMG AASMGS + + GE R ALP+
Sbjct: 61 KDTYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSISTGGEITRRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + +Y + GK + + ++RD +S
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITRVYAQRTGKPLWMISEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A EA D+GV D V
Sbjct: 181 AEEAQDYGVADPV 193
>gi|302804775|ref|XP_002984139.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
gi|300147988|gb|EFJ14649.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
Length = 274
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 65/212 (30%), Positives = 117/212 (55%), Gaps = 6/212 (2%)
Query: 11 SEDVFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ + + P V +T + DI++ L +ERI+F+ I++ + A +L+L+
Sbjct: 57 AQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHIDEEFGNQVLATMLYLD 116
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + K++ Y++ PGG +T MAIYDTM +K + T +G A ++ LL+AGEKGMR
Sbjct: 117 SVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYAYNIAGFLLAAGEKGMR 176
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
++P RI + P G G+A+DI+ A+++ +++ L + G E++ K R
Sbjct: 177 TSMPLTRIAIQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAVKTGHPEEKIHKDFSRI 236
Query: 188 HIMSASEACDWGVVDKVL---MSRIDIEEKSK 216
SA EA D+G++DK++ + D K +
Sbjct: 237 KRFSAQEALDYGLIDKIIRPPTVKPDASSKGE 268
>gi|302770831|ref|XP_002968834.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
gi|302784736|ref|XP_002974140.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300158472|gb|EFJ25095.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300163339|gb|EFJ29950.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
Length = 221
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 76/198 (38%), Positives = 119/198 (60%), Gaps = 3/198 (1%)
Query: 11 SEDVFLGL-VPMVVEQ--TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
++ V + L VP V + + + DI++ L +ERIVF+ I+D +A + A +L+L+
Sbjct: 2 AQVVMMPLGVPKVPYRASSEGSWQYVDIWNVLYQERIVFIGQHIDDDLANRVVATMLYLD 61
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + K + YI+ PGG +T MAIYDTM ++ I+T +G A + LL+AGEKGMR
Sbjct: 62 SVDSSKHLHFYISCPGGSLTPSMAIYDTMGSVRSGIATLALGAAYDIAGFLLAAGEKGMR 121
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
A+P ARI L P G GQA DI+ ++ +++ L E N G+ +++ K LDR
Sbjct: 122 MAMPLARIALQPPEGATRGQADDIQTEVNELGRLRDCLYEQLAINTGQPVDKIHKDLDRM 181
Query: 188 HIMSASEACDWGVVDKVL 205
I SA EA D+G++DK++
Sbjct: 182 KIFSAQEALDYGLIDKIV 199
>gi|218679329|ref|ZP_03527226.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CIAT
894]
Length = 176
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 5 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDD-DIRIYVNSPGGHVESGDSIHDMIKF 63
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 64 IKPKVWMIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 123
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I G+ +++ K DRD+ +SA EA D+G+V +++ S DI
Sbjct: 124 IKMNERLNKIMAAATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSHADI 176
>gi|190892811|ref|YP_001979353.1| endopeptidase Clp protein, subunit 3 [Rhizobium etli CIAT 652]
gi|190698090|gb|ACE92175.1| endopeptidase Clp protein, subunit 3 [Rhizobium etli CIAT 652]
Length = 194
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMVKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAAATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|18422548|ref|NP_568644.1| CLPP4 (CLP PROTEASE P4); serine-type endopeptidase [Arabidopsis
thaliana]
gi|297794727|ref|XP_002865248.1| hypothetical protein ARALYDRAFT_494440 [Arabidopsis lyrata subsp.
lyrata]
gi|75306344|sp|Q94B60|CLPP4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 4,
chloroplastic; AltName: Full=Endopeptidase ClpP4;
Short=nClpP4; AltName: Full=nClpP3; Flags: Precursor
gi|14596089|gb|AAK68772.1| ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
gi|30023792|gb|AAP13429.1| At5g45390 [Arabidopsis thaliana]
gi|297311083|gb|EFH41507.1| hypothetical protein ARALYDRAFT_494440 [Arabidopsis lyrata subsp.
lyrata]
gi|332007860|gb|AED95243.1| ATP-dependent Clp protease proteolytic subunit 4 [Arabidopsis
thaliana]
Length = 292
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++A MAIYD +Q ++ +ST +G AAS S++L AG KG RFA+PN RI++HQP GG
Sbjct: 129 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 188
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SGQA D+E A++++ K + I +++E+V K +DRD MS EA ++G++D
Sbjct: 189 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 248
Query: 204 VLM 206
V+
Sbjct: 249 VID 251
>gi|218516591|ref|ZP_03513431.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
8C-3]
gi|327193487|gb|EGE60382.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
CNPAF512]
Length = 194
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDD-DIRIYVNSPGGHVESGDSIHDMVKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAAATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|302143493|emb|CBI22054.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 81/169 (47%), Positives = 119/169 (70%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LLKERIVF+ ++D +A I +QLL L+A++P K+I L+INSPGG ++A MAIYD +Q
Sbjct: 4 LLKERIVFLGNNVDDFVADAIISQLLLLDAQDPTKDIRLFINSPGGSLSATMAIYDIVQL 63
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ +ST +G +AS S++L G KG RFA+PN RI++HQP GG SGQA D+E AQ+I
Sbjct: 64 VRADVSTVALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAQEI 123
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ K + +I G+++E+VEK +DRD MS EA ++G++D V+
Sbjct: 124 MHNKSNVTKIIAGFSGRSFEQVEKDIDRDRYMSPIEAVEYGIIDAVIDR 172
>gi|242040043|ref|XP_002467416.1| hypothetical protein SORBIDRAFT_01g027680 [Sorghum bicolor]
gi|241921270|gb|EER94414.1| hypothetical protein SORBIDRAFT_01g027680 [Sorghum bicolor]
Length = 289
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/173 (47%), Positives = 117/173 (67%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ LL+ERIVF+ +IED +A + +QLL L+A +P +I L++NSPGG ++A MAIY
Sbjct: 76 DVMGLLLRERIVFLGNEIEDFLADAVVSQLLLLDAIDPDSDIRLFVNSPGGSLSATMAIY 135
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ ++ +ST MG A S S++L G KG RFA+PN RI++HQP GG SGQA D+E
Sbjct: 136 DVMQLVRADVSTIGMGIAGSTASIILGGGTKGKRFAMPNTRIMIHQPVGGASGQALDVEV 195
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A++I+ KR + I G+T E+VEK +DRD M EA D+G++D V+
Sbjct: 196 QAKEILTNKRNVIRIVSGFTGRTLEQVEKDIDRDRYMGPLEAVDYGLIDGVID 248
>gi|88855134|ref|ZP_01129799.1| ATP-dependent Clp protease proteolytic subunit [marine
actinobacterium PHSC20C1]
gi|88815662|gb|EAR25519.1| ATP-dependent Clp protease proteolytic subunit [marine
actinobacterium PHSC20C1]
Length = 205
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 82/169 (48%), Positives = 121/169 (71%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ +LLK+RI+++ ++ D A ICA++L L AE+P+++I LY+NSPGG +TAGMAIYD
Sbjct: 10 VFDQLLKDRIIWLGSEVRDSNANEICAKILLLAAEDPKRDIYLYVNSPGGSITAGMAIYD 69
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM+F+ I T +G AASMG LLS+G KG R+ PNAR+LLHQPSGGF G ++DI+
Sbjct: 70 TMKFVPNDIVTVGIGLAASMGQFLLSSGTKGKRYITPNARVLLHQPSGGFGGTSADIQTQ 129
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
A I+ +K+R+ E+ + GK+ E+V DRD+ +A +A ++G VD
Sbjct: 130 AGVILDMKKRMAELTAEQTGKSVEQVLIDNDRDNWFTARQALEYGFVDH 178
>gi|11465983|ref|NP_054525.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana tabacum]
gi|78102563|ref|YP_358703.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
sylvestris]
gi|81301593|ref|YP_398889.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
tomentosiformis]
gi|116527|sp|P12210|CLPP_TOBAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122212889|sp|Q33C07|CLPP_NICTO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122213564|sp|Q3C1K4|CLPP_NICSY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1143166|gb|AAA84867.1| ClpP protease [Nicotiana tabacum]
gi|2924270|emb|CAA77422.1| ATP-dependent protease proteolytic subuni [Nicotiana tabacum]
gi|77799590|dbj|BAE46679.1| ATP-dependent protease proteolytic subunit [Nicotiana sylvestris]
gi|80750952|dbj|BAE48028.1| ATP-dependent protease proteolytic subunit [Nicotiana
tomentosiformis]
Length = 196
Score = 167 bits (422), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|229139426|ref|ZP_04267997.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228643973|gb|EEL00234.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 164
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 92/164 (56%), Positives = 120/164 (73%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P VVEQT GERSYDIYSRLLK+RI+ + +I D +A+ + AQLLFLEAE+ +K+I
Sbjct: 1 MNAIPYVVEQTKLGERSYDIYSRLLKDRIIIIGSEINDQVASSVVAQLLFLEAEDAEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG TAG AI DTM IKP + T CMG AAS G+LLL +G KG RFALPN+ I
Sbjct: 61 FLYINSPGGSTTAGFAILDTMNLIKPDVQTLCMGFAASFGALLLLSGAKGKRFALPNSEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
++HQP GG GQA++IE A+ I+K+K +N++ + G +E
Sbjct: 121 MIHQPLGGAKGQATEIEITAKRILKLKHDINKMIAEKQGNRLKE 164
>gi|52220834|ref|YP_086990.1| ATP-dependent Clp protease proteolytic subunit [Panax ginseng]
gi|68052101|sp|Q68RY2|CLPP_PANGI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51235337|gb|AAT98533.1| ATP-dependent protease; catalytic subunit [Panax ginseng]
Length = 196
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E +Y DIY+RL +ER++F+ + ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L++NSPGG V G+AIYDTMQF++P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 KDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK + V + L+RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKTGKPFWVVSEDLERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|326509601|dbj|BAJ87016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 296
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 83/180 (46%), Positives = 119/180 (66%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
G S D+ LL+ERI+F+ +IED +A + +QLL L+A + + +I L++NSPGG +
Sbjct: 76 PGGVASGDVMGLLLRERIIFLGNEIEDFLADAVVSQLLLLDAMDSESDIRLFVNSPGGSL 135
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
+A MAIYD MQ ++ +ST MG A S S+LL G KG RFA+PN RI++HQP GG SG
Sbjct: 136 SATMAIYDVMQLVRADVSTIGMGIAGSTASILLGGGAKGKRFAMPNTRIMMHQPVGGASG 195
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA D+E A++I+ KR + + G+T E+VEK +DRD M EA D+G++D V+
Sbjct: 196 QALDVEVQAKEILASKRNVIRLISGFTGRTLEQVEKDIDRDRYMGPLEAVDYGIIDGVID 255
>gi|290489440|gb|ADD31104.1| clp protease proteolytic subunit protein [Ilex cornuta]
Length = 196
Score = 166 bits (421), Expect = 1e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|254421954|ref|ZP_05035672.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196189443|gb|EDX84407.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 230
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 117/198 (59%), Gaps = 19/198 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + +D + LI AQLL+LE ++P+K I YINS G
Sbjct: 25 DLQSLLLKERIVYLGTPLVSSDDFKRQMGVDVTKLIIAQLLYLEFDDPEKPIYFYINSTG 84
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+++IKPP+ T C+GQA +++LS+G KG R +LP+A
Sbjct: 85 TSWYTGDAVGFETEAFAICDTLKYIKPPVHTICLGQAMGTAAMILSSGAKGSRASLPHAT 144
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K +I N G++ E+++K DR ++ E
Sbjct: 145 IVLNQTRSGAQGQATDIQIRAEEVLANKAAQLDILSANTGQSTEKLDKDTDRMFYLTPEE 204
Query: 195 ACDWGVVDKVLMSRIDIE 212
A D+G++D+VL S ++
Sbjct: 205 AKDYGLIDRVLSSTKELP 222
>gi|161784217|ref|YP_001595533.1| ATP-dependent protease proteolytic subunit [Lemna minor]
gi|88696795|gb|ABD48520.1| ATP-dependent protease proteolytic subunit [Lemna minor]
Length = 202
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G++D V
Sbjct: 181 ATEAQAYGLIDLV 193
>gi|283794992|ref|YP_003359383.1| ATP-dependent protease subunit [Olea europaea]
gi|330850767|ref|YP_004376445.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|281428711|gb|ADA69950.1| ATP-dependent protease subunit [Olea europaea]
gi|291059277|gb|ADD72113.1| clp protease proteolytic subunit [Olea europaea]
gi|328795457|emb|CBR30339.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
Length = 196
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+A+YDTMQF++P + T CMG AASM S +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAVYDTMQFVRPDVHTICMGLAASMASFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|159161186|ref|YP_001542472.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|148508469|gb|ABQ81476.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|227481143|emb|CAP62522.1| ATP-dependent protease proteolytic subunit [Ceratophyllum demersum]
Length = 202
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +I+ M+ I +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLYRERLLFLGQEIDSEMSNQIVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+A+YDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVPPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|317046198|ref|YP_004072487.1| ATP-dependent protease [Corynocarpus laevigata]
gi|309252915|gb|ADO60335.1| ATP-dependent protease [Corynocarpus laevigata]
Length = 195
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V +T E DIY+RL +ER++F+ ++ ++ + A +++L E+
Sbjct: 1 MPIGVPKVPFRTPGDEDASWIDIYNRLYRERLLFLGQAVDSEISNQLIALMVYLSTESET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T C+G AASMGS +L G R ALP+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTVCLGLAASMGSFILVGGAITKRLALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQPS F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPSSAFYEAQTGEFILEAEELLKLRETLTMVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|209550385|ref|YP_002282302.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|209536141|gb|ACI56076.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM2304]
Length = 194
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMIKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNKIMAAATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|28202196|ref|NP_777437.1| ATP-dependent Clp protease proteolytic subunit [Anthoceros
formosae]
gi|41688497|sp|Q85BZ1|CLPP_ANTFO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27807898|dbj|BAC55373.1| ATP-dependent protease proteolytic subunit exon3 [Anthoceros
formosae]
gi|27808041|dbj|BAC55470.1| ATP-dependent protease proteolytic subunit [Anthoceros formosae]
Length = 204
Score = 166 bits (421), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 125/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ ++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YDTMQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARIMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 AKEAQIYGIVDFV 193
>gi|260905350|ref|ZP_05913672.1| putative Clp protease proteolytic subunit [Brevibacterium linens
BL2]
Length = 193
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 78/188 (41%), Positives = 118/188 (62%), Gaps = 1/188 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P VV+++ GE+ D+YS LL RI+++ I+D +A I AQLL LEA + + I LY
Sbjct: 6 IPNVVDRSGGGEKIVDVYSHLLGNRIIYLGVPIDDGVANTIIAQLLHLEASSRELPIQLY 65
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TA AIYD M I P++T C+GQAA+ ++LL+AGE G R L +AR +L
Sbjct: 66 INSPGGSLTAMTAIYDAMHHIGAPVATICVGQAAADAAVLLAAGEPGQRSMLEHARAVLR 125
Query: 139 QPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP G D+ A +I + +R + + K G++ ++ LDRD +++A A D
Sbjct: 126 QPHAEGARGAIPDLIVAADEIARQRRDVEAMLAKGTGRSVDQTHADLDRDLVLNAQAARD 185
Query: 198 WGVVDKVL 205
+G+VD++L
Sbjct: 186 FGLVDQIL 193
>gi|50954514|ref|YP_061802.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
gi|67460475|sp|Q6AFZ8|CLPP1_LEIXX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|50950996|gb|AAT88697.1| ATP-dependent Clp protease proteolytic subunit [Leifsonia xyli
subsp. xyli str. CTCB07]
Length = 197
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 92/173 (53%), Positives = 120/173 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLLK+RI+++ ++ D A I A+LL L AE+ +++I LYINSPGG +TAGMAIYD
Sbjct: 10 VFDRLLKDRIIWLGSEVRDENANEIAAKLLLLAAEDSKRDIYLYINSPGGSITAGMAIYD 69
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQF+ I T +G AASMG LLL+AG KG R+ PNAR+LLHQP GGF G ASDI
Sbjct: 70 TMQFVPNDIVTVGIGMAASMGQLLLTAGTKGKRYITPNARVLLHQPHGGFGGTASDIRTQ 129
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ I+ +K+RL EI + GKT ++V DRD +A EA D+G VD + S
Sbjct: 130 AQLILHMKKRLAEITSEATGKTVDQVNADGDRDRWFTAQEALDYGFVDHIRES 182
>gi|124302931|ref|YP_001023726.1| ATP-dependent Clp protease proteolytic subunit [Angiopteris evecta]
gi|160380542|sp|A2T358|CLPP_ANGEV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110628329|gb|ABG79625.1| clp protease proteolytic subunit [Angiopteris evecta]
Length = 197
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ LYINSPGG V G+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 60 QDMYLYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSSILTGGEITKRIALPH 119
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD MS
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD +
Sbjct: 180 AEEAKAYGIVDLI 192
>gi|116617132|ref|YP_817507.1| clp protease proteolytic subunit [Coffea arabica]
gi|122153644|sp|A0A360|CLPP_COFAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116242188|gb|ABJ89703.1| clp protease proteolytic subunit [Coffea arabica]
Length = 196
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|110456628|gb|ABG74755.1| ATP-dependent protease catalytic subunit [Forsythia europaea]
gi|290489438|gb|ADD31103.1| clp protease proteolytic subunit protein [Ehretia acuminata]
Length = 196
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|163840396|ref|YP_001624801.1| ATP-dependent endopeptidase Clp proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
gi|162953872|gb|ABY23387.1| ATP-dependent endopeptidase clp proteolytic subunit [Renibacterium
salmoninarum ATCC 33209]
Length = 211
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 83/178 (46%), Positives = 118/178 (66%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RLL +RIV + +++D +A I AQLL L AE+P+ +ISLYINSPGG V+AGMAIYDTM
Sbjct: 28 RLLHQRIVVLGTEVDDAVANRIVAQLLLLSAEDPRADISLYINSPGGSVSAGMAIYDTMM 87
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I + T MG AASMG +LL AG G RF+LP++RIL+HQ S G G +D+E Q+
Sbjct: 88 MIPNEVGTLAMGLAASMGQILLCAGAAGKRFSLPHSRILMHQGSAGIQGTTADVEIQEQN 147
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ I+ +N + + G T E+E+ DRDH SA EA +G+VD ++ + +++ +
Sbjct: 148 LRAIEDMVNGLLAHHTGHTIAEIERDSDRDHWFSAEEARQYGMVDHLVGNLAELQNPN 205
>gi|11466963|ref|NP_054384.1| ATP-dependent Clp protease proteolytic subunit [Epifagus
virginiana]
gi|231812|sp|P30063|CLPP_EPIVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|336919|gb|AAA65858.1| protease [Epifagus virginiana]
Length = 196
Score = 166 bits (420), Expect = 2e-39, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KEI L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL GE R A P+
Sbjct: 61 KEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F G Q + A++++K++ L +YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A +A +G+VD V
Sbjct: 181 AKDAQAYGIVDLV 193
>gi|108796681|ref|YP_636469.1| ATP-dependent Clp protease proteolytic subunit [Zygnema
circumcarinatum]
gi|122211761|sp|Q32RQ7|CLPP_ZYGCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393665|gb|AAX45807.1| proteolytic subunit 2 of clp protease [Zygnema circumcarinatum]
Length = 211
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 123/195 (63%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL ++R++F+ ++D +A + +++L EN
Sbjct: 1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ +YINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K+K + ++Y++ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEGQAGECMIEAEEVLKLKDCVTKVYMQRTGKPMAVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A EA +G+VD V
Sbjct: 181 AKEAQAYGIVDLVAT 195
>gi|284929272|ref|YP_003421794.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
gi|284809716|gb|ADB95413.1| protease subunit of ATP-dependent protease [cyanobacterium UCYN-A]
Length = 226
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 118/201 (58%), Gaps = 19/201 (9%)
Query: 34 DIYSRLLKERIVFVT----------GQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERI+++ Q+ + LI AQLL+L+ +NP K I YINS G
Sbjct: 22 DLESLLLKERIIYLGLPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDNPDKPIFFYINSTG 81
Query: 84 GVV---------TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
T AI DTM ++KPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 82 TSWHTGDAVGFETEAFAICDTMNYVKPPIHTICIGQAMGTAAMILSAGTKGCRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K + +I KN G+ +++ K +DR ++ +
Sbjct: 142 IVLNQNRSGAQGQATDIQIRAKEVLSNKSTMLQILSKNTGQAVDKISKDIDRTFYLTPEK 201
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++D+VL S ++ + +
Sbjct: 202 AKEYGLIDRVLESTKELPKSA 222
>gi|21593305|gb|AAM65254.1| ATP-dependent Clp protease proteolytic subunit (ClpP4) [Arabidopsis
thaliana]
Length = 292
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 83/183 (45%), Positives = 123/183 (67%), Gaps = 1/183 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++A MAIYD +Q ++ +ST +G AAS S++L AG KG RFA+PN RI++HQP GG
Sbjct: 129 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 188
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SGQ D+E A++++ K + I +++E+V K +DRD MS EA ++G++D
Sbjct: 189 ASGQVIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 248
Query: 204 VLM 206
V+
Sbjct: 249 VID 251
>gi|183217765|ref|YP_001837385.1| ATP-dependent Clp protease proteolytic subunit [Guizotia
abyssinica]
gi|179366280|gb|ACB86551.1| clp protease proteolytic subunit [Guizotia abyssinica]
Length = 196
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+A+YDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+G FS A+ + +++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|300869049|ref|ZP_07113651.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
gi|300332960|emb|CBN58845.1| ATP-dependent Clp protease-like protein [Oscillatoria sp. PCC 6506]
Length = 222
Score = 165 bits (419), Expect = 3e-39, Method: Composition-based stats.
Identities = 80/200 (40%), Positives = 121/200 (60%), Gaps = 20/200 (10%)
Query: 34 DIYSRLLKERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + + LI AQLL+L+ ++P+K I YINS G
Sbjct: 17 DLESLLLKERIVYLGMPLFSSDEIKRNVGIDVTELIIAQLLYLQFDDPEKPIYFYINSSG 76
Query: 84 GVV----------TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
T AI DTM +IKPP+ T C+GQA +++LSAG KG R +LP+A
Sbjct: 77 TSWGDEGYAIGLETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGFRASLPHA 136
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
I+L+Q G GQA+DI+ AQ+++ KR + EI+ KN G+T E++ K +DR ++ +
Sbjct: 137 TIVLNQSKTGGRGQATDIQIMAQEVLLNKRTVVEIFAKNTGQTVEKIAKDMDRMFYLTPA 196
Query: 194 EACDWGVVDKVLMSRIDIEE 213
EA ++G++D+VL S D+ +
Sbjct: 197 EAKEYGLLDRVLESSKDLPK 216
>gi|119493581|ref|ZP_01624245.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452571|gb|EAW33754.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 220
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/199 (37%), Positives = 116/199 (58%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + +D + LI AQLL+L+ ++P K I YINS G
Sbjct: 17 DLESLLLKERIVYLGLPLYSSDDIKRQVGIDVTELIIAQLLYLQFDDPDKPIYFYINSTG 76
Query: 84 GVVT---------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IKPP+ T C+GQA +++LSAG KG R +LP+A
Sbjct: 77 TSWYGGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAMILSAGTKGYRASLPHAT 136
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++L+Q G GQA+DI+ A++++ K+ EI KN G++ E + K DR ++
Sbjct: 137 LILNQAKSGSRGQATDIQIRAKEVLANKQTFLEIMAKNTGQSTERIAKDTDRMFYLTPEA 196
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL SR ++ +
Sbjct: 197 AKEYGLIDRVLQSRKELPK 215
>gi|158335483|ref|YP_001516655.1| ATP-dependent Clp protease-like protein [Acaryochloris marina
MBIC11017]
gi|158305724|gb|ABW27341.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 228
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 19/198 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + +D + LI AQLLFL+ ++P K I YINS G
Sbjct: 26 DLQSLLLKERIVYLGMPLFSSDDIKRQVGFDVTELIIAQLLFLQFDDPDKPIFFYINSTG 85
Query: 84 GVVT---------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM +IKPP+ T C+GQA +++LSAG KG R +L +A
Sbjct: 86 TSWYGGDAIGFETEAFAICDTMSYIKPPVHTICIGQAMGTAAMILSAGTKGYRASLGHAT 145
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQASDI+ AQ+++ K + +I KN G+T E++ K +DR +S E
Sbjct: 146 IVLNQARSGAQGQASDIQIRAQEVLANKATMLDILQKNTGQTAEKISKDMDRMFYLSPEE 205
Query: 195 ACDWGVVDKVLMSRIDIE 212
A D+G++D+VL S+ ++
Sbjct: 206 AKDYGLIDRVLASQKELP 223
>gi|290489432|gb|ADD31100.1| clp protease proteolytic subunit protein [Antirrhinum majus]
Length = 196
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVVPGVAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|241205772|ref|YP_002976868.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. trifolii WSM1325]
gi|240859662|gb|ACS57329.1| Endopeptidase Clp [Rhizobium leguminosarum bv. trifolii WSM1325]
Length = 194
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMIKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVATPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I G+ ++++K DRD+ +SA EA ++G+V +++ S+ DI
Sbjct: 142 IKMNERLNRIMAAATGQPLDKIDKDTDRDYWLSAEEAKEYGLVSRIVTSQADI 194
>gi|81176276|ref|YP_398353.1| ATP-dependent Clp protease proteolytic subunit [Lactuca sativa]
gi|122212017|sp|Q332V2|CLPP_LACSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78675194|dbj|BAE47620.1| ATP-dependent clp protease proteolytic subunit [Lactuca sativa]
gi|88657007|gb|ABD47257.1| clp protease proteolytic subunit [Lactuca sativa]
Length = 196
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+A+YDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+G FS A+ + +++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|94502515|ref|YP_588142.1| ATP-dependent Clp protease proteolytic subunit [Helianthus annuus]
gi|122179559|sp|Q1KXT4|CLPP_HELAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88656919|gb|ABD47170.1| clp protease proteolytic subunit [Helianthus annuus]
Length = 196
Score = 165 bits (418), Expect = 3e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+A+YDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+G FS A+ + +++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPVWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|308745997|ref|YP_003934583.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
gi|302375430|gb|ADL29804.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
Length = 200
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LY+NSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++ K++ + +Y + GK + + ++RD S
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCITRVYAQRTGKPLWIISEDMERDVFSS 180
Query: 192 ASEACDWGVVDKV 204
A EA D+GV D V
Sbjct: 181 AEEAQDYGVADLV 193
>gi|229494686|ref|ZP_04388444.1| Clp protease [Rhodococcus erythropolis SK121]
gi|229318353|gb|EEN84216.1| Clp protease [Rhodococcus erythropolis SK121]
Length = 202
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 1/190 (0%)
Query: 26 TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
T+ G R + RL ++R + +TG++ D MA +C++L+ L +P++++ LYINSPGG
Sbjct: 7 TDTGYRDL-LTDRLFRQRTILLTGEVNDAMAERVCSELVLLATTDPKRDVVLYINSPGGS 65
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
V AG+AIYDTM+ I + T MG AASMG +LL +G G R +L ++RI++HQPS G
Sbjct: 66 VFAGLAIYDTMKLIPNDVVTVAMGFAASMGQVLLCSGTHGKRNSLAHSRIMMHQPSAGIG 125
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G A DI A+ + +KR+ EI G+T EE+E DRD +A +A ++G+VD+V+
Sbjct: 126 GTAVDIAIQAESLELMKRQSQEILAAETGRTVEEIETDSDRDRWFTAEQAREYGIVDRVV 185
Query: 206 MSRIDIEEKS 215
S +I ++
Sbjct: 186 TSFAEIAPQA 195
>gi|116073335|ref|ZP_01470597.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068640|gb|EAU74392.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 221
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 80/201 (39%), Positives = 123/201 (61%), Gaps = 19/201 (9%)
Query: 34 DIYSRLLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S +LKERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 20 DLPSLMLKERIVYLGLPLFSDDDTKRQLGLDVTELIIAQLLYLEFDNPEKPIYFYINSTG 79
Query: 84 GVV---------TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
T AI DT+ +IKPP+ T C+GQA +++LSAG KG R ALP++
Sbjct: 80 TSWHTGDAIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSS 139
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+LHQP G GQA+DI+ A+++++ KR + EI N G+T E++ + DR ++ +
Sbjct: 140 IVLHQPRSGARGQATDIQIRAKEVLQNKRSMLEILSANTGRTVEQLSQDSDRMSYLNPQQ 199
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A ++G++D+VL SR D+ ++
Sbjct: 200 AVEYGLIDRVLSSRKDLPSQA 220
>gi|126640549|ref|YP_001083533.1| ATP-dependent Clp protease proteolytic subunit [Acinetobacter
baumannii ATCC 17978]
Length = 155
Score = 165 bits (418), Expect = 4e-39, Method: Composition-based stats.
Identities = 96/155 (61%), Positives = 122/155 (78%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
MA LI AQ+LFLEAENP K+I LYINSPGG VTAGMAIYDTMQFIKP + T+CMGQAASM
Sbjct: 1 MANLIVAQMLFLEAENPDKDIHLYINSPGGSVTAGMAIYDTMQFIKPDVVTYCMGQAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
G+ LL+AG KG R+ L NAR+++HQP GGF GQASDIE HA++I+ IK RLN + ++ G
Sbjct: 61 GAFLLNAGAKGKRYCLENARVMIHQPLGGFRGQASDIEIHAREILFIKERLNRLMAEHSG 120
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ Y+ + + DRD+ M+A A ++G+VD+VL R
Sbjct: 121 QDYDTIARDTDRDNFMTAQAAKEYGLVDQVLSKRP 155
>gi|108773205|ref|YP_635771.1| ATP-dependent Clp protease proteolytic subunit [Chara vulgaris]
gi|122237366|sp|Q1ACH6|CLPP_CHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77157861|gb|ABA61902.1| proteolytic subunit 2 of clp protease [Chara vulgaris]
Length = 219
Score = 165 bits (417), Expect = 4e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 124/193 (64%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E DIY+RL +ER++F+ +++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDIYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE+ +YINSPGG V AG+A++D MQ++ P ++T CMG AASMGS +L GE R ALP+
Sbjct: 61 KEMFMYINSPGGSVVAGIAVFDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++Y+ G+ + + +DRD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECLMEAEEVLKLRDCIAKVYMNRTGQPGWVIYRDMDRDIFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ALEAKSYGIVDLV 193
>gi|290489462|gb|ADD31115.1| clp protease proteolytic subunit protein [Ficus sp. Moore 315]
Length = 208
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + DIY+RL +ER++F+ I ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGDEDALWIDIYNRLYRERLLFLGQPITSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L++NSPGG V G+ IYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFLNSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +Y + GK+ + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYAQRTGKSLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|290489448|gb|ADD31108.1| clp protease proteolytic subunit protein [Nerium oleander]
Length = 196
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|308235223|ref|ZP_07665960.1| ATP-dependent Clp protease proteolytic subunit 2 [Gardnerella
vaginalis ATCC 14018]
gi|311114524|ref|YP_003985745.1| endopeptidase Clp [Gardnerella vaginalis ATCC 14019]
gi|310946018|gb|ADP38722.1| endopeptidase Clp [Gardnerella vaginalis ATCC 14019]
Length = 203
Score = 165 bits (417), Expect = 5e-39, Method: Composition-based stats.
Identities = 82/173 (47%), Positives = 127/173 (73%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I+++LLK+RI+++ +++D A +ICAQ+L L A++P+K+I LYINSPGG +TAGMAIYD
Sbjct: 23 IFNQLLKDRIIWLGSEVKDENANIICAQMLMLAAQDPKKDIWLYINSPGGSITAGMAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T +G AASMG LLS+G G RF +AR+L+HQPSGG G A+D+ +
Sbjct: 83 TMQLIEPDVATIAVGMAASMGQFLLSSGTPGKRFITSHARVLMHQPSGGVGGTATDVRIN 142
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+ I+ +K+ L+E+ + G T EE+ + + DH +A +A ++G VDK++ +
Sbjct: 143 AELIMDMKKTLSELTAQQTGHTVEEIYRDNEYDHWFTAQQALEYGFVDKIVTT 195
>gi|166235729|gb|ABY85636.1| ATP-dependent protease proteolytic subunit [Silene latifolia]
Length = 196
Score = 164 bits (416), Expect = 5e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPVSSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA G+VD V
Sbjct: 181 AEEAQAHGIVDLV 193
>gi|166235597|gb|ABY85510.1| ATP-dependent protease proteolytic subunit [Silene littorea]
Length = 196
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++E ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVESEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRXTLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 AAEAQAYGIVDLV 193
>gi|26324293|dbj|BAC24984.1| unnamed protein product [Mus musculus]
Length = 189
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 91/167 (54%), Positives = 128/167 (76%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G I+D +A+L+ AQLLFL++E+ +K I +YINSPGGVVTAG+AIYDTMQ+I PI T+C+
Sbjct: 2 GPIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTAGLAIYDTMQYILNPICTWCV 61
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
GQAASMGSLLL+AG GMR +LPN+RI++HQPSGG GQA+DI A++I+K+K++L I
Sbjct: 62 GQAASMGSLLLAAGSPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYNI 121
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
Y K+ ++ + +E ++RD MS EA ++G++DKVL+ E
Sbjct: 122 YAKHTKQSLQVIESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDE 168
>gi|330850654|ref|YP_004376535.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
gi|302024783|gb|ADK89629.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
Length = 212
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 120/201 (59%), Gaps = 12/201 (5%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 133 AR---------ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
A ++ S + GQA + A++++K++ + ++YV+ GK + +
Sbjct: 121 AFRILLFVNRVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISED 180
Query: 184 LDRDHIMSASEACDWGVVDKV 204
++RD MSA EA +G+VD V
Sbjct: 181 MERDVFMSAKEAKVYGIVDLV 201
>gi|116253257|ref|YP_769095.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium
leguminosarum bv. viciae 3841]
gi|116243122|sp|Q1MDH4|CLPP3_RHIL3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|115257905|emb|CAK09003.1| putative ATP-dependent Clp protease [Rhizobium leguminosarum bv.
viciae 3841]
Length = 194
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 23 LFKSRSIFIYGPINQELAQKVCSQLVALAAASDE-DIRIYVNSPGGHVESGDSIHDMIKF 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 82 IKPKVWMIGTGWVASAGALIYVATPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 141
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I G+ ++++K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 142 IKMNERLNRIMAAATGQPLDKIDKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 194
>gi|225155839|ref|ZP_03724325.1| Endopeptidase Clp [Opitutaceae bacterium TAV2]
gi|224803389|gb|EEG21626.1| Endopeptidase Clp [Opitutaceae bacterium TAV2]
Length = 218
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 80/175 (45%), Positives = 111/175 (63%), Gaps = 2/175 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I + L++R +F+ G + D A I +LL+LEA P K+I+ YINSPGG +TAGMAIYD
Sbjct: 43 IQKKFLEQRKIFLWGAVTDESAKDITERLLYLEAIAPGKDITFYINSPGGSITAGMAIYD 102
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIE 152
TMQ I PI+ G AASMGS+LLS KG RF P++R+L+HQP F G A+DI
Sbjct: 103 TMQLISSPITVVVTGMAASMGSILLSGAPKGRRFLYPHSRVLIHQPLISGRFIGPATDIN 162
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ++ K++ LN+I G+ E + K DRD ++A EA +G+ DK++
Sbjct: 163 IQAQEMEKLRAELNQILANASGQPIERINKDTDRDFYLNAQEAIAYGLADKIIEK 217
>gi|167391831|ref|YP_001671708.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
gi|166344158|gb|ABY86808.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 196
Score = 164 bits (416), Expect = 6e-39, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIESDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQVGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|307104278|gb|EFN52533.1| hypothetical protein CHLNCDRAFT_49097 [Chlorella variabilis]
Length = 202
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 66/196 (33%), Positives = 120/196 (61%), Gaps = 4/196 (2%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V +T + + DI++ L +ERI+F++ +++ + + A +L+L++EN +
Sbjct: 1 MPIGVPRVPYRTPKEGSWQWVDIWNCLYRERIIFLSKPVDEELGNQLVATMLYLDSENKK 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++++YIN GG V +AI+DTM+ IK + T G M LL+ G+KG R AL N
Sbjct: 61 -DMNIYINCSGGEVVPCLAIHDTMRHIKSDVGTVGFGGCMGMSGFLLAVGKKGKRSALQN 119
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
RI++H PSG GQASDI R A+++++I+ ++ I + G+ +++V + R+
Sbjct: 120 TRIMVHHPSGAARGQASDINREARELLRIRDYMDNILAQATGQPFDKVAQDFSRNCYFDT 179
Query: 193 SEACDWGVVDKVLMSR 208
SEA ++G++D ++ R
Sbjct: 180 SEAQEYGLIDNIVRPR 195
>gi|115453497|ref|NP_001050349.1| Os03g0411500 [Oryza sativa Japonica Group]
gi|57222443|gb|AAO37504.2| putative clp-like energy-dependent protease [Oryza sativa Japonica
Group]
gi|108708774|gb|ABF96569.1| Clp protease family protein, expressed [Oryza sativa Japonica
Group]
gi|113548820|dbj|BAF12263.1| Os03g0411500 [Oryza sativa Japonica Group]
gi|215678629|dbj|BAG92284.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765082|dbj|BAG86779.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 259
Score = 164 bits (416), Expect = 7e-39, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G + D+ + LL RI+F+ I +A + +QL+ L A +
Sbjct: 65 SENENPPLMPAIM--TPAG--ALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVD 120
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ +I +Y+N PGG + + +AIYD M +IKP + T C G AS +++L+ GEKGMR+A+
Sbjct: 121 EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM 180
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP G G ++ R + + + ++++++ G+T + V++ +RD M
Sbjct: 181 PNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQTLDMVQQWTERDRFM 240
Query: 191 SASEACDWGVVDKVLMSR 208
S+SEA D+G+VD +L +R
Sbjct: 241 SSSEAMDFGLVDALLETR 258
>gi|332140445|ref|YP_004426183.1| Protease subunit of ATP-dependent Clp protease [Alteromonas
macleodii str. 'Deep ecotype']
gi|327550467|gb|AEA97185.1| Protease subunit of ATP-dependent Clp protease [Alteromonas
macleodii str. 'Deep ecotype']
Length = 153
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 93/153 (60%), Positives = 122/153 (79%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
+LFLEAENP+K+I LYINSPGG VTAGMAIYDTM+FIKP +ST CMGQAASMG+ LLSAG
Sbjct: 1 MLFLEAENPEKDIFLYINSPGGSVTAGMAIYDTMRFIKPDVSTVCMGQAASMGAFLLSAG 60
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
KG R+ LPN+R+++HQP GGF GQASD E HA++I+ IK +LN + + G+ YE+V +
Sbjct: 61 AKGKRYCLPNSRVMIHQPLGGFQGQASDFEIHAKEILSIKEKLNRLLADHTGQDYEKVAR 120
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
DRD+ +SA+EA ++G+VD+VL +R D+
Sbjct: 121 DTDRDNFLSATEAKEYGLVDQVLANRSDVAATK 153
>gi|194212522|ref|XP_001496091.2| PREDICTED: similar to ClpP caseinolytic peptidase, ATP-dependent,
proteolytic subunit homolog (E. coli) [Equus caballus]
Length = 298
Score = 164 bits (415), Expect = 7e-39, Method: Composition-based stats.
Identities = 90/166 (54%), Positives = 128/166 (77%)
Query: 50 QIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
QI+D +A+L+ AQLLFL++E+ +K I +YINSPGGVVT+G+AIYDTMQ+I PI T+C+G
Sbjct: 112 QIDDSVASLVIAQLLFLQSESNKKPIHMYINSPGGVVTSGLAIYDTMQYILNPICTWCVG 171
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
QAASMGSLLL+AG GMR +LPN+RI++HQPSGG GQA+DI A++I+K+K++L IY
Sbjct: 172 QAASMGSLLLAAGTPGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEIMKLKKQLYSIY 231
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
K+ ++ + +E ++RD MS EA ++G++DKVL+ E
Sbjct: 232 AKHTKQSLQVIESVMERDRYMSPMEAQEFGILDKVLVHPPQDGEDE 277
>gi|224074500|ref|XP_002304381.1| predicted protein [Populus trichocarpa]
gi|222841813|gb|EEE79360.1| predicted protein [Populus trichocarpa]
Length = 220
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 77/169 (45%), Positives = 115/169 (68%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL+ERIVF+ I+D +A I +QLL L+A++P K+I L++N PGG ++A MAIYD +Q
Sbjct: 12 LLRERIVFLGNNIDDFVADAIISQLLLLDAQDPTKDIRLFVNCPGGSLSASMAIYDVVQL 71
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ +ST +G +AS S++L G KG RFA+PN RI++HQP GG SGQA D+E A++I
Sbjct: 72 VRADVSTIALGISASTASIILGGGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAREI 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ K + I +T E+V+K +DRD MS EA ++G++D V+
Sbjct: 132 MHNKNNIIRIVSGFTSRTVEQVQKDMDRDRYMSPIEAVEYGIIDGVIDR 180
>gi|195644476|gb|ACG41706.1| hypothetical protein [Zea mays]
Length = 292
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G + D+ + LL RI+F+ I +A + +QL+ L A +
Sbjct: 98 SENENPPLMPAIM--TPGG--ALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAID 153
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ +I +Y+N PGG + + +AIYD M +IKP + T C G AS +++L+ GEKGMR+A+
Sbjct: 154 EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM 213
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GG G ++ R + + + ++++++ G+ + V++ +RD M
Sbjct: 214 PNARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDMVQQWTERDRFM 273
Query: 191 SASEACDWGVVDKVLMSR 208
S+SEA D+G++D +L +R
Sbjct: 274 SSSEAMDFGLLDALLETR 291
>gi|226509256|ref|NP_001140712.1| hypothetical protein LOC100272787 [Zea mays]
gi|194689904|gb|ACF79036.1| unknown [Zea mays]
gi|194700704|gb|ACF84436.1| unknown [Zea mays]
gi|194702420|gb|ACF85294.1| unknown [Zea mays]
gi|194703926|gb|ACF86047.1| unknown [Zea mays]
gi|194708092|gb|ACF88130.1| unknown [Zea mays]
Length = 292
Score = 164 bits (415), Expect = 8e-39, Method: Composition-based stats.
Identities = 70/198 (35%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G + D+ + LL RI+F+ I +A + +QL+ L A +
Sbjct: 98 SENENPPLMPAIM--TPGG--ALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAID 153
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ +I +Y+N PGG + + +AIYD M +IKP + T C G AS +++L+ GEKGMR+A+
Sbjct: 154 EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM 213
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GG G ++ R + + + ++++++ G+ + V++ +RD M
Sbjct: 214 PNARVMIHQPQGGSEGNVEEVRRQVGETIYARDKVDKMFAAFTGQPLDMVQQWTERDRFM 273
Query: 191 SASEACDWGVVDKVLMSR 208
S+SEA D+G++D +L +R
Sbjct: 274 SSSEAMDFGLLDALLETR 291
>gi|16331161|ref|NP_441889.1| ATP-dependent Clp protease-like-protein [Synechocystis sp. PCC
6803]
gi|18202351|sp|P74466|CLPR_SYNY3 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1653655|dbj|BAA18567.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 225
Score = 164 bits (415), Expect = 9e-39, Method: Composition-based stats.
Identities = 72/199 (36%), Positives = 117/199 (58%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + + LI AQLL+L+ ++P K I YINS G
Sbjct: 22 DLESLLLKERIVYLGMPLFSSDEVKQQVGIDVTQLIIAQLLYLQFDDPDKPIYFYINSTG 81
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IKPP+ T C+GQA +++LS+G KG R +LP+A
Sbjct: 82 TSWYTGDAVGFETEAFAICDTLNYIKPPVHTICIGQAMGTAAMILSSGTKGYRASLPHAT 141
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI+ A++++ K+ + EI N G+T E++ K +DR ++ ++
Sbjct: 142 IVLNQNRTGAQGQATDIQIRAKEVISNKQTMLEILSLNTGQTQEKLAKDMDRTFYLTPAQ 201
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL S ++ +
Sbjct: 202 AKEYGLIDRVLESPAELPK 220
>gi|242066888|ref|XP_002454733.1| hypothetical protein SORBIDRAFT_04g036413 [Sorghum bicolor]
gi|241934564|gb|EES07709.1| hypothetical protein SORBIDRAFT_04g036413 [Sorghum bicolor]
Length = 276
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 71/198 (35%), Positives = 124/198 (62%), Gaps = 4/198 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G + D+ + LL R++F+ I +A + +QL+ L A +
Sbjct: 82 SENENPPLMPAIM--TPGG--ALDLATVLLGNRVIFIGQYINSQVAQRVISQLVTLAAVD 137
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ +I +Y+N PGG + + +AIYD M +IKP + T C G AS +++L+ GEKGMR+A+
Sbjct: 138 EEADILIYLNCPGGSLYSILAIYDCMSWIKPKVGTVCFGVVASQAAIILAGGEKGMRYAM 197
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GG G ++ R + V + ++++++ G+ + V++ +RD M
Sbjct: 198 PNARVMIHQPQGGSEGNVEEVRRQVGETVYARDKVDKMFAAFTGQPLDMVQQWTERDRFM 257
Query: 191 SASEACDWGVVDKVLMSR 208
S+SEA D+G+VD +L +R
Sbjct: 258 SSSEAMDFGLVDALLETR 275
>gi|308813209|ref|XP_003083911.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
gi|116055793|emb|CAL57878.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
Length = 292
Score = 164 bits (414), Expect = 9e-39, Method: Composition-based stats.
Identities = 66/198 (33%), Positives = 116/198 (58%), Gaps = 3/198 (1%)
Query: 13 DVFLGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAE 69
+ + VP V +T + DI++ L +ERI+++ I++ + + A +LFL++
Sbjct: 90 KTMMPIGVPRVPYKTPNESSWQWVDIWNCLYRERIIWIGQTIDEELGNQLVATMLFLDSV 149
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K + LYI S GG + MAI DTM+ +K + T G A +MG LLL++G+KG R A
Sbjct: 150 DRNKPMYLYITSEGGQIVPTMAIMDTMKHLKAEVGTVGFGSARAMGGLLLASGKKGKRAA 209
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPN I+LH PSG G ASD++ +++++I+ ++N+ G+ + V + + RD
Sbjct: 210 LPNTCIMLHHPSGVARGSASDVQNEGKELMRIRSQINKKISDITGRPVDVVSEEIRRDKH 269
Query: 190 MSASEACDWGVVDKVLMS 207
+ +A ++G++DK+L
Sbjct: 270 FTPEQALEYGIIDKILYR 287
>gi|60117170|ref|YP_209504.1| ATP-dependent Clp protease proteolytic subunit [Huperzia lucidula]
gi|68052074|sp|Q5SD28|CLPP_HUPLU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50659978|gb|AAT80700.1| ATP-dependent protease [Huperzia lucidula]
Length = 209
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ Q++D +A + +++ E+
Sbjct: 1 MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ LY+NSPGG V AG++IYD MQF+ P + T C+G AASMGS +L+ GE R ALP+
Sbjct: 61 RDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVLAGGEITKRIALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + Q + A++++KI+ + ++Y + GK V + +RD S
Sbjct: 121 ARVMIHQPASSYYEGQVGECIMEAEEVLKIRDCITKVYAQRTGKPLWVVSEDTERDVFTS 180
Query: 192 ASEACDWGVVDKV 204
A EA +GV+D V
Sbjct: 181 AEEAKVYGVIDPV 193
>gi|254444482|ref|ZP_05057958.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198258790|gb|EDY83098.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 192
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 2/191 (1%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P E+T + I + L+ER +F+ GQ+ D A + +L +LEA+ P K+I+ Y
Sbjct: 1 MPEKDEKTPDSPVASQIQKKFLEERKIFLWGQVSDESAKDVTEKLFYLEADAPGKDITFY 60
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
IN+PGG VTAG+AIYDT++ I + G AASMGS+LLSA +KG R P+A++L+H
Sbjct: 61 INTPGGSVTAGLAIYDTIKLISSEVIVVVTGLAASMGSILLSAPKKGNRLLYPHAKVLIH 120
Query: 139 QPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
QP F G A DI AQD+ K + LN I G+ +++++ DRD MSA EA
Sbjct: 121 QPLIGGQFQGPAVDIHIFAQDMEKTREELNRILADASGQPLDKIKEDTDRDFYMSAQEAI 180
Query: 197 DWGVVDKVLMS 207
D+G+ D+++ S
Sbjct: 181 DYGLADRIIES 191
>gi|290489468|gb|ADD31118.1| clp protease proteolytic subunit protein [Liquidambar styraciflua]
Length = 196
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +I ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEINSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG + G+AIYDTMQF++P + T CMG AASMGS +L G+ R A P+
Sbjct: 61 KDLYLFINSPGGWLIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGKITKRIAFPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S F Q + A++++K++ + +Y + GK + V + ++RD MS
Sbjct: 121 ARVMIHQPGSSYFEAQTGEFILEAEELLKLRETITRVYAQRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|310790485|gb|EFQ26018.1| ATP-dependent Clp protease proteolytic subunit [Glomerella
graminicola M1.001]
Length = 248
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 84/182 (46%), Positives = 129/182 (70%), Gaps = 7/182 (3%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ERIV + G I+D ++ I AQLL+LE+++P K I++YINSPGG V++G+AIYDTM +IK
Sbjct: 57 ERIVCLNGAIDDTVSASIVAQLLWLESDSPDKAITMYINSPGGSVSSGLAIYDTMTYIKS 116
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ST C+G A+SM +LLL+ GE G R+ALP++ +++HQP GG GQASDI +A I +I
Sbjct: 117 PVSTVCLGAASSMAALLLTGGEAGKRYALPHSSVMIHQPLGGTQGQASDILIYANQIQRI 176
Query: 162 KRRLNEIYVKNCGK-------TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
++++NEI ++ K + EE+ ++RD ++A EA + GV+D++L R + + K
Sbjct: 177 RKQINEIMKRHINKSFGQEKYSLEEIHDMMERDKYLTAEEAKEIGVIDEILTRREEKDLK 236
Query: 215 SK 216
K
Sbjct: 237 EK 238
>gi|4454056|emb|CAA04393.1| ClpP [Arabidopsis thaliana]
Length = 228
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 84/183 (45%), Positives = 124/183 (67%), Gaps = 1/183 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 6 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 64
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++A MAIYD +Q ++ +ST +G AAS S++L AG KG RFA+PN RI++HQP GG
Sbjct: 65 GSLSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGNRFAMPNTRIMIHQPLGG 124
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SGQA D+E A++++ K + I +++E+V K +DRD MS EA ++G++D
Sbjct: 125 ASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIEAVEYGLIDG 184
Query: 204 VLM 206
V+
Sbjct: 185 VID 187
>gi|168050943|ref|XP_001777916.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670676|gb|EDQ57240.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 201
Score = 164 bits (414), Expect = 1e-38, Method: Composition-based stats.
Identities = 79/191 (41%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ + + + RI+FV + +A + ++LL L A N ++EI
Sbjct: 13 PMMPAVL--TPSGP--VDLSTLMFRNRIIFVGSPVNSEVAQSVVSKLLTLAAINDEEEIK 68
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG + MAIYD MQ+IKP +ST C G AAS G+LLL+ G+KG RFA+PNARI+
Sbjct: 69 MYINCPGGSTYSIMAIYDAMQWIKPDVSTVCFGIAASQGALLLAGGKKGKRFAMPNARIM 128
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G A D+ R +++ + +++++Y C + E V K +RD+ SA+EA
Sbjct: 129 IHQPQGGCGGTADDVRRQVNEVMSSRDKIDQMYSIFCNQPLERVRKFTERDYFFSAAEAM 188
Query: 197 DWGVVDKVLMS 207
D+G++D +L +
Sbjct: 189 DFGLIDGLLET 199
>gi|255961322|ref|YP_003097504.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
gi|254941494|gb|ACT89009.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
Length = 206
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 76/190 (40%), Positives = 119/190 (62%), Gaps = 3/190 (1%)
Query: 19 VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP V + + E D ++RL +ER++F+ ++D +A I +++L EN K+I
Sbjct: 5 VPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRSKDIY 64
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG V AG+++YD MQF+ P + T C+G AASMGS +L+ G R ALP+AR++
Sbjct: 65 LYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPHARVM 124
Query: 137 LHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP+ F QA + A++I+K++ + IY + GK V + ++RD MSA EA
Sbjct: 125 IHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKTGKPLWVVSEDMERDVFMSAREA 184
Query: 196 CDWGVVDKVL 205
+G++D V+
Sbjct: 185 RVYGIIDLVV 194
>gi|114329994|ref|YP_740675.1| clp protease proteolytic subunit [Nandina domestica]
gi|122165937|sp|Q09FT6|CLPP_NANDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054496|gb|ABI49889.1| clp protease proteolytic subunit [Nandina domestica]
Length = 202
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRIDI 211
A+EA G+VD V + + D+
Sbjct: 181 ATEAQAHGIVDLVAVENTGDL 201
>gi|156597979|gb|ABU85256.1| clp protease proteolytic subunit [Cycas micronesica]
Length = 202
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 78/201 (38%), Positives = 125/201 (62%), Gaps = 5/201 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I YINSPGG V G++IYD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 61 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + +YV+ GK + ++RD MS
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISGDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRIDI 211
A+EA +G+VD V + + D+
Sbjct: 181 ATEAQAYGIVDLVAVENTEDL 201
>gi|13518463|ref|NP_084822.1| ATP-dependent Clp protease proteolytic subunit [Lotus japonicus]
gi|18202721|sp|Q9BBQ9|CLPP_LOTJA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13359004|dbj|BAB33221.1| ATP-dependent protease subunit [Lotus japonicus]
Length = 196
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ ++ ++ + +++L E+ +
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDK 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L+ G+ R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 AAEAQAYGIVDLV 193
>gi|119512062|ref|ZP_01631156.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463288|gb|EAW44231.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 220
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 75/185 (40%), Positives = 114/185 (61%), Gaps = 9/185 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV-------- 85
D+ S L+KERIV++ + + LI A+LL+L++++P+K I +YINS G
Sbjct: 25 DLPSLLMKERIVYLGMPLVPAVTELIIAELLYLQSDDPEKPIKIYINSTGTSGYSGEPIG 84
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
T AIYDTM++IKPPI T C+G A M ++LLSAG KG R +LP++ I+LHQP
Sbjct: 85 FETEAFAIYDTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPHSSIILHQPKSYA 144
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQA+DI+ A++++ K L +I G+ E++ K +DR M+ EA D+G++D+V
Sbjct: 145 QGQATDIQIRAREVLINKASLVDILGHTTGQAPEKITKDMDRLLYMTPYEARDYGLIDRV 204
Query: 205 LMSRI 209
Sbjct: 205 FEKEE 209
>gi|166235861|gb|ABY85762.1| ATP-dependent protease proteolytic subunit [Silene aegyptiaca]
gi|166235883|gb|ABY85783.1| ATP-dependent protease proteolytic subunit [Silene atocioides]
Length = 196
Score = 163 bits (413), Expect = 1e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|194476907|ref|YP_002049086.1| Clp protease proteolytic subunit [Paulinella chromatophora]
gi|171191914|gb|ACB42876.1| Clp protease proteolytic subunit [Paulinella chromatophora]
Length = 225
Score = 163 bits (413), Expect = 2e-38, Method: Composition-based stats.
Identities = 78/208 (37%), Positives = 125/208 (60%), Gaps = 7/208 (3%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYS--RLLKERIVFVTGQIEDHMATLI 59
+FE DS + + L+ EQ R E +YS + ++RI+ ++ ++ D A+ I
Sbjct: 19 TFEKMQSLDSSNNYSPLL----EQEYR-ESVKGLYSIPKNTEDRIILISEEMNDEDASDI 73
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LEAENP ++I +YIN GG + + IYDTMQ IKP + T C G A M LL
Sbjct: 74 IAQLLMLEAENPDEDIQVYINCMGGSMYGFVGIYDTMQAIKPDVVTLCYGSAFEMSGFLL 133
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
S G KG R ALPNARI+L+QP F G +D++ + ++++ +++ + + + G+ +E+
Sbjct: 134 SGGAKGKRLALPNARIMLNQPETSFYGCITDLQLYNKELMLMRKNICSLIAAHTGQRFEK 193
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMS 207
V +RD SA+EA ++G++D++L
Sbjct: 194 VTADTNRDQFFSAAEAIEYGLIDRILNK 221
>gi|113475005|ref|YP_721066.1| ATP-dependent Clp protease-like protein [Trichodesmium erythraeum
IMS101]
gi|110166053|gb|ABG50593.1| Endopeptidase Clp [Trichodesmium erythraeum IMS101]
Length = 229
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S +LKERIV++ + + LI AQLL+L+ +NP+K I YINS G
Sbjct: 25 DLESLMLKERIVYLGLPLFSSDEVKRNVGIDVTQLIIAQLLYLQFDNPEKPIYFYINSTG 84
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DTM ++KPPI T C+GQA +++LSAG KG R +LP+A
Sbjct: 85 TSWYTGDAIGFETEAFAICDTMSYVKPPIHTICIGQAMGTAAMILSAGTKGYRASLPHAT 144
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+Q G GQA+DI A++++ K +I KN G++ E++ K DR M+
Sbjct: 145 IVLNQAKTGARGQATDISIRAKEVLVNKTTFLDILSKNTGQSVEKIAKDTDRMLYMTPEI 204
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL SR ++ +
Sbjct: 205 AKEYGLIDQVLASRKELPK 223
>gi|290489464|gb|ADD31116.1| clp protease proteolytic subunit protein [Gunnera manicata]
Length = 198
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 126/194 (64%), Gaps = 4/194 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E +Y DIY+RL + RI+F+ ++ ++ + + L++L E +
Sbjct: 1 MPIGVPRVPHRIPGEEDAYWVDIYNRLYRNRIMFLGQEVSSEISNQLISLLVYLTIEEDR 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+A+YDTM+F++P I T CMG AASMGS LL+ GE R A P+
Sbjct: 61 KDVFLFINSPGGWVVPGVALYDTMRFVQPEIHTICMGMAASMGSFLLAGGEITKRIAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F + + +++++K++ + ++YV+ GK + + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYETRTGEFILESEELLKLREIITKVYVQRTGKPFWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKVL 205
A+EA +G++D +L
Sbjct: 181 ATEAQAYGLIDIIL 194
>gi|290489436|gb|ADD31102.1| clp protease proteolytic subunit protein [Dillenia indica]
Length = 196
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDNEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDT+QF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTIQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G++D V
Sbjct: 181 AREAQAYGIIDLV 193
>gi|58700085|ref|ZP_00374620.1| Clp protease [Wolbachia endosymbiont of Drosophila ananassae]
gi|58533399|gb|EAL57863.1| Clp protease [Wolbachia endosymbiont of Drosophila ananassae]
Length = 142
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 101/141 (71%), Positives = 128/141 (90%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P+VVEQT+RGER+YDIYSRL+KERI+FVTG IED+MA++I AQLLFLE+ENP K+I
Sbjct: 1 MTLIPIVVEQTSRGERAYDIYSRLVKERIIFVTGPIEDNMASVIVAQLLFLESENPDKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG++IYDTMQ+I P +ST C+GQAASMGSLLL+AG KG R++LP++RI
Sbjct: 61 CMYINSPGGVVTAGLSIYDTMQYINPDVSTLCIGQAASMGSLLLAAGTKGKRYSLPHSRI 120
Query: 136 LLHQPSGGFSGQASDIERHAQ 156
++HQPSGG+ GQA+DIE HA
Sbjct: 121 MIHQPSGGYHGQATDIEIHAN 141
>gi|296399222|gb|ADH10397.1| clp protease proteolytic subunit [Selaginella moellendorffii]
Length = 206
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 121/194 (62%), Gaps = 4/194 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + E D ++RL +ER++F+ ++D +A I +++L EN
Sbjct: 1 MPIGVPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V AG+++YD MQF+ P + T C+G AASMGS +L+ G R ALP+
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++I+K++ + IY + GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKVL 205
A EA +G++D V+
Sbjct: 181 AREARVYGIIDLVV 194
>gi|166235619|gb|ABY85531.1| ATP-dependent protease proteolytic subunit [Silene uniflora]
gi|166235751|gb|ABY85657.1| ATP-dependent protease proteolytic subunit [Silene cryptoneura]
gi|166235839|gb|ABY85741.1| ATP-dependent protease proteolytic subunit [Silene schafta]
gi|166240002|gb|ABY86529.1| ATP-dependent protease proteolytic subunit [Heliosperma alpestre]
Length = 196
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|166235663|gb|ABY85573.1| ATP-dependent protease proteolytic subunit [Silene sorensenis]
Length = 196
Score = 163 bits (412), Expect = 2e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|290489458|gb|ADD31113.1| clp protease proteolytic subunit protein [Cornus florida]
Length = 196
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AI+DTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIFDTMQFVQPDVHTICMGMAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASAYYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|115605046|ref|YP_784498.1| clp protease proteolytic subunit [Piper cenocladum]
gi|122164337|sp|Q06GN5|CLPP_PIPCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112253775|gb|ABI14496.1| clp protease proteolytic subunit [Piper cenocladum]
Length = 202
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ I +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
A +++HQP+ F + A++++K++ L +YV+ G V + L+RD MS
Sbjct: 121 AWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDLERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|113954996|ref|YP_729944.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9311]
gi|113882347|gb|ABI47305.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 225
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 80/198 (40%), Positives = 115/198 (58%), Gaps = 19/198 (9%)
Query: 34 DIYSRLLKERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S +LKERIV++ + + LI AQLLFLE +NP K I YINS G
Sbjct: 24 DLPSLMLKERIVYLGLPLFSDGDAKRQMGLDVTELIIAQLLFLEFDNPDKPIYFYINSTG 83
Query: 84 GVVT---------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A
Sbjct: 84 TSWYSGESIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHAS 143
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+LHQP G GQA+DI+ A++++ KR + EI N G++ EE+ DR ++ E
Sbjct: 144 IVLHQPRSGARGQATDIQIRAKEVLHNKRAMLEILSTNTGRSVEELSADSDRMSYLTPQE 203
Query: 195 ACDWGVVDKVLMSRIDIE 212
A +G++D+VL SR D+
Sbjct: 204 AVTYGLIDRVLDSRKDLP 221
>gi|290489466|gb|ADD31117.1| clp protease proteolytic subunit protein [Heuchera sanguinea]
Length = 196
Score = 162 bits (411), Expect = 2e-38, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|298710838|emb|CBJ26347.1| ATP-dependent Clp protease, proteolytic subunit [Ectocarpus
siliculosus]
Length = 237
Score = 162 bits (411), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/199 (34%), Positives = 104/199 (52%), Gaps = 31/199 (15%)
Query: 11 SEDVFLGL-VPMVVEQTNR--GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+ V + + VP V + DIY+RL +ERI+F+ +I+D +A I LL+L+
Sbjct: 63 ASTVMMPIGVPKVAYRVPGAPTADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLD 122
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E+ K I LY+N PGG V AG+A++DTMQ I+ + T +G AASM S +L+AG K
Sbjct: 123 SEDSTKPIYLYVNCPGGSVIAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAK--- 179
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
A I+ I+ + +Y G+T E++ LDRD
Sbjct: 180 -------------------------VEATQIMHIRDNIVRMYAMMTGQTQEQITIDLDRD 214
Query: 188 HIMSASEACDWGVVDKVLM 206
+ MSA A D+G+VD V+
Sbjct: 215 NFMSAQAAADYGLVDNVIK 233
>gi|168036513|ref|XP_001770751.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677969|gb|EDQ64433.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 195
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
++P V+ T G D+ + + + RI+FV + +A + ++LL L A N ++EI
Sbjct: 7 PMMPAVL--TPSGP--VDLSTLMFRNRIIFVGSSVNSEVAQSVISKLLTLAAINDEEEIK 62
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN PGG + MAI+D MQ+IKP +ST C G AAS G+LLL+ G+KG RFA+PNARI+
Sbjct: 63 MYINCPGGSTYSIMAIFDAMQWIKPDVSTVCFGIAASQGALLLAGGKKGKRFAMPNARIM 122
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG G A D+ R +++ + +++++Y C + E V K +RD+ SA+EA
Sbjct: 123 IHQPQGGCGGTADDVRRQVNEVMSSRDKIDKMYSTFCNQPLERVRKFTERDYFFSAAEAL 182
Query: 197 DWGVVDKVLMS 207
D+G++D +L +
Sbjct: 183 DFGLIDGLLET 193
>gi|75755684|ref|YP_319788.1| ATP-dependent Clp protease proteolytic subunit [Acorus calamus]
gi|161622334|ref|YP_001586206.1| ATP-dependent Clp protease proteolytic subunit [Acorus americanus]
gi|122217404|sp|Q3V509|CLPP_ACOCL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74381734|emb|CAI53819.1| ATP-dependent protease proteolytic subunit [Acorus calamus]
gi|160369877|gb|ABX38768.1| clp protease proteolytic subunit [Acorus americanus]
Length = 202
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+INSPGG V G+ +YDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD +S
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|254572225|ref|XP_002493222.1| hypothetical protein [Pichia pastoris GS115]
gi|238033020|emb|CAY71043.1| Hypothetical protein PAS_chr3_0979 [Pichia pastoris GS115]
gi|328352764|emb|CCA39162.1| ATP-dependent Clp protease, protease subunit [Pichia pastoris CBS
7435]
Length = 226
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 88/182 (48%), Positives = 129/182 (70%), Gaps = 4/182 (2%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++++LL ERI+++ G I+D AT I AQLL+LE+++ K+I++YINSPGG VTAG+AIY
Sbjct: 42 DLFTKLLNERIIYLAGGIDDAQATSITAQLLYLESQSTSKQINIYINSPGGSVTAGLAIY 101
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--GGFSGQASDI 151
DT+Q+I+ P+ST C+GQA SM SLLL++G G R LPNA I++HQPS G GQA+DI
Sbjct: 102 DTIQYIRAPVSTVCLGQACSMASLLLASGTHGKRLILPNATIMVHQPSSANGIKGQATDI 161
Query: 152 ERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E +A+ I+ K++L +Y+K+ T +E+ L+RD M EA G+ D+VL +
Sbjct: 162 EIYARHIINTKQKLQTLYLKHMSPTMTVDEITALLERDRFMEPEEAVSLGLADRVLERKP 221
Query: 210 DI 211
+
Sbjct: 222 PV 223
>gi|312373461|gb|EFR21200.1| hypothetical protein AND_17405 [Anopheles darlingi]
Length = 185
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 88/165 (53%), Positives = 123/165 (74%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G + D +++LI AQLLFL++EN K I +YINSPGG VTAG+AIYDTMQ++KPP++T+C+
Sbjct: 2 GPVHDDLSSLIVAQLLFLQSENGTKPIHMYINSPGGSVTAGLAIYDTMQYVKPPVATWCV 61
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
GQA SMGSLLL+AG GMR +LPNARI++HQPSGG GQA+DI+ A++I+K+K++L EI
Sbjct: 62 GQACSMGSLLLAAGAPGMRHSLPNARIMIHQPSGGAQGQATDIQIQAEEILKLKKQLTEI 121
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
Y K+ + + + ++RD +S EA G++D VL E
Sbjct: 122 YGKHTKTSIDVLYSKMERDTFLSPEEAQALGIIDTVLEHPPSSTE 166
>gi|197294136|ref|YP_002149757.1| clp protease proteolytic subunit [Cicer arietinum]
gi|197089824|gb|ACH41094.1| clp protease proteolytic subunit [Cicer arietinum]
Length = 197
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 73/196 (37%), Positives = 120/196 (61%), Gaps = 4/196 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ L VP V + D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPLGVPKVPFLVPGDDEASWIDLYNRLFQERLLFLGQEVNSEISNQLVGLMVYLSLEDKN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAI+DTMQF++ + T C+G AASMGSL+L GE R A P+
Sbjct: 61 KDLYLFINSPGGEVISGMAIFDTMQFVEAEVQTVCVGLAASMGSLILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A ++++++R + IY + GK ++ K ++RD MS
Sbjct: 121 ARVMIHQPATSFYEGQTVECMLEANELLQMRRNITNIYAQRTGKPSWQISKDMERDLFMS 180
Query: 192 ASEACDWGVVDKVLMS 207
A EA +G+VD V S
Sbjct: 181 AEEAQAYGLVDMVADS 196
>gi|166201959|gb|ABY84433.1| ATP-dependent protease proteolytic subunit [Lychnis flos-jovis]
Length = 196
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++E ++ I +++L E+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVYNRLYRERLLFLGQEVESEISNQIIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +G+ IYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGSVISGVGIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|226968697|ref|YP_002808657.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
gi|226431175|gb|ACO55581.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
Length = 200
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 128/196 (65%), Gaps = 5/196 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL +ER++F+ ++D +A + +L+L AE+
Sbjct: 1 MPIGVPKVAYRLP-GEAVPQWVDLYNRLYRERVLFLGSALDDELANQLNGIMLYLSAEDS 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
Q+ + LYINSPGG VTAG++++D M ++ ++T +G AASM S +L+ GE+G R ALP
Sbjct: 60 QRRLFLYINSPGGSVTAGLSVFDIMNYVDAAVTTIGIGFAASMASFILAGGERGARLALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ RI++HQP GG GQAS+I +I+++++ + +YV G++ + + LDRD +S
Sbjct: 120 HCRIMIHQPQGGMEGQASEIVLEKDEIIRLRKLIGRLYVDLTGQSAATIARDLDRDKFLS 179
Query: 192 ASEACDWGVVDKVLMS 207
A +A ++G+VD V +
Sbjct: 180 ARDAREYGLVDLVASN 195
>gi|290489476|gb|ADD31122.1| clp protease proteolytic subunit protein [Staphylea colchica]
Length = 196
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 78/194 (40%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER---SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V Q GE DIY+RL +ER++F+ ++ ++ + A +++L E+
Sbjct: 1 MPIGVPRVPFQLP-GEGFVSWIDIYNRLYRERLLFLGQMVDTVISNHLIALMVYLTLESD 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL G+ R A P
Sbjct: 60 TKDLYLFINSPGGWVMPGIAIYDTMQFVRPDVQTICMGFAASMGSFLLVGGKITKRIAFP 119
Query: 132 NARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP+ F G Q + A++++K++ + IY + GK V + ++RD M
Sbjct: 120 HARVMIHQPAAAFYGAQTGEFVLEAEELLKLREIMTSIYAQRTGKPLWVVSEDMERDTFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SATEAQAHGLVDLV 193
>gi|323449038|gb|EGB04929.1| hypothetical protein AURANDRAFT_38757 [Aureococcus anophagefferens]
Length = 273
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/159 (48%), Positives = 116/159 (72%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
++D +A ++ AQLL+L ++P K+I+LYINSPGG V+AGMAIYDTMQF+ +ST C G
Sbjct: 102 VDDEVANVLVAQLLYLANDDPTKDITLYINSPGGSVSAGMAIYDTMQFVPCDVSTVCFGT 161
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV 170
AASMG+ LL AG KG R +LPN+RI++HQP GG GQA+DIE A++I+ ++++LN
Sbjct: 162 AASMGAFLLGAGAKGKRRSLPNSRIMIHQPLGGAQGQAADIEIQAKEILFVRQQLNTFIS 221
Query: 171 KNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ G+ +++E+ DRD M EA +G++D+V+ ++
Sbjct: 222 EYTGQPMDKIEEDCDRDFFMCPEEALSYGLIDEVVKTKT 260
>gi|156573693|gb|ABU85179.1| clp protease proteolytic subunit [Anethum graveolens]
Length = 197
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ K V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|290489454|gb|ADD31111.1| clp protease proteolytic subunit protein [Berberidopsis corallina]
Length = 196
Score = 162 bits (410), Expect = 3e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K + L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 KNLYLFINSPGGWVIPGVAIYDTMQFVRPNVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A+++++++ L +Y + GK+ V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLRLRESLTRVYAQRTGKSLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|222086641|ref|YP_002545175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
gi|221724089|gb|ACM27245.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Agrobacterium
radiobacter K84]
Length = 195
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L + + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 24 LFKSRSIFIYGGITQELAQKVCSQLVALSSASDD-DIRIYVNSPGGHVESGDSIHDMIKF 82
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 83 IKPKVWIIGTGWVASAGALIYVSVPKERRICLPNTRFLLHQPSGGTRGMASDIEIQAREI 142
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I+ + G+ E++ K DRD+ +SA EA +G+V +++ S+ +I
Sbjct: 143 IKMNERLNRIFSEATGQPIEKIAKDTDRDYWLSAEEAKAYGLVSRIVTSQAEI 195
>gi|224128302|ref|XP_002320293.1| predicted protein [Populus trichocarpa]
gi|222861066|gb|EEE98608.1| predicted protein [Populus trichocarpa]
Length = 168
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 79/151 (52%), Positives = 112/151 (74%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
MA +I AQLL+L+A +P K+I +Y+NSPGG VTAGMAI+DTM+ I+P +ST C+G AASM
Sbjct: 1 MANIIVAQLLYLDAVDPNKDIVMYVNSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
G+ LLSAG KG R++LPN+RI++HQP GG G SDI+ A +++ K LN + G
Sbjct: 61 GAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQSDIDIQANEMLHHKANLNGYLAYHTG 120
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++ E++ + DRD+ MSA EA D+G++D V+
Sbjct: 121 QSLEKINQDTDRDYFMSAKEAKDYGLIDGVI 151
>gi|166235641|gb|ABY85552.1| ATP-dependent protease proteolytic subunit [Silene zawadskii]
Length = 196
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|297800408|ref|XP_002868088.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
gi|297313924|gb|EFH44347.1| hypothetical protein ARALYDRAFT_493172 [Arabidopsis lyrata subsp.
lyrata]
Length = 305
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 74/182 (40%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M ++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+E ++I IK + ++Y K+ GK+ E++E + R S SEA ++G++DKV+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPSEAVEYGIIDKVV 284
Query: 206 MS 207
+
Sbjct: 285 YN 286
>gi|114107157|ref|YP_740142.1| clp protease proteolytic subunit [Daucus carota]
gi|323149107|ref|YP_004222671.1| clp protease proteolytic subunit [Anthriscus cerefolium]
gi|122239962|sp|Q0G9T7|CLPP_DAUCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113200932|gb|ABI32448.1| clp protease proteolytic subunit [Daucus carota]
gi|289645600|gb|ADD13663.1| clp protease proteolytic subunit [Anthriscus cerefolium]
Length = 197
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ K V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|114107071|ref|YP_740227.1| clp protease proteolytic subunit [Liriodendron tulipifera]
gi|122227470|sp|Q0G9J4|CLPP_LIRTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113201019|gb|ABI32534.1| clp protease proteolytic subunit [Liriodendron tulipifera]
Length = 202
Score = 162 bits (409), Expect = 4e-38, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + D+++RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G++IYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|18414804|ref|NP_567521.1| ATP-dependent Clp protease proteolytic subunit, putative
[Arabidopsis thaliana]
gi|75301253|sp|Q8LB10|CLPR4_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 4, chloroplastic; Short=ClpR4;
Flags: Precursor
gi|21593086|gb|AAM65035.1| ATP-dependent Clp protease proteolytic subunit ClpR4, putative
[Arabidopsis thaliana]
gi|26450085|dbj|BAC42162.1| putative ClpP protease complex subunit ClpR4 [Arabidopsis thaliana]
Length = 305
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M ++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+E ++I IK + ++Y K+ GK+ E++E + R S +EA ++G++DKV+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
Query: 206 MS 207
+
Sbjct: 285 YN 286
>gi|115604958|ref|YP_784411.1| clp protease proteolytic subunit [Drimys granadensis]
gi|122164416|sp|Q06GX2|CLPP_DRIGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112032686|gb|ABH88321.1| clp protease proteolytic subunit [Drimys granadensis]
Length = 202
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F + A++++K++ L +YV+ G + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDVV 193
>gi|50346808|ref|YP_053179.1| ATP-dependent Clp protease proteolytic subunit [Nymphaea alba]
gi|121720638|ref|YP_001001559.1| clp protease proteolytic subunit [Nuphar advena]
gi|68052136|sp|Q6EW27|CLPP_NYMAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380559|sp|A1XFY0|CLPP_NUPAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50250353|emb|CAF28619.1| ATP-dependent protease proteolytic subunit [Nymphaea alba]
gi|84682229|gb|ABC60483.1| clp protease proteolytic subunit [Nuphar advena]
Length = 202
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYD MQ + P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRID 210
A+EA G+VD V + + D
Sbjct: 181 ATEAQAHGIVDLVAVENSAD 200
>gi|19698857|gb|AAL91164.1| unknown protein [Arabidopsis thaliana]
gi|23197684|gb|AAN15369.1| unknown protein [Arabidopsis thaliana]
Length = 305
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 73/182 (40%), Positives = 111/182 (60%), Gaps = 8/182 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEKKPIYLYINSTGTTKNGEKLGY 164
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M ++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQPIARFQ 224
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+E ++I IK + ++Y K+ GK+ E++E + R S +EA ++G++DKV+
Sbjct: 225 GQATDVEIARKEIKHIKTEMVKLYSKHIGKSPEQIEADMKRPKYFSPTEAVEYGIIDKVV 284
Query: 206 MS 207
+
Sbjct: 285 YN 286
>gi|290489470|gb|ADD31119.1| clp protease proteolytic subunit protein [Oxalis latifolia]
Length = 195
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V +T R DIY+RL +ER++F+ ++ ++ + A +L+L EN +
Sbjct: 1 MPIGVPKVPFRTPGYRRKSWIDIYNRLYRERVLFLGQGVDSTISNQLIALMLYLSHENEK 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ +INSPGG V G+AIYDTMQF++P I T CMG AASMGS LL G R A P+
Sbjct: 61 -DLYFFINSPGGWVIPGIAIYDTMQFVRPDIQTICMGFAASMGSFLLVGGAITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F G Q +++ A++++K++ L +Y + GK V + ++RD MS
Sbjct: 120 ARVMIHQPAAIFFGGQVTEVILEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|91208926|ref|YP_538961.1| ATP-dependent Clp protease proteolytic subunit [Gossypium hirsutum]
gi|122201402|sp|Q2L926|CLPP_GOSHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85687440|gb|ABC73652.1| clp protease proteolytic subunit [Gossypium hirsutum]
Length = 196
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|260063635|ref|YP_003196715.1| putative ATP-dependent of ClpP protease, proteolytic subunit
[Robiginitalea biformata HTCC2501]
gi|88783080|gb|EAR14253.1| putative ATP-dependent of ClpP protease, proteolytic subunit
[Robiginitalea biformata HTCC2501]
Length = 182
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 85/169 (50%), Positives = 125/169 (73%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
R+L+ER VF+ GQ++D A + +LL+L+ +N + EI LYINSPGG VT+G +IYDT+
Sbjct: 15 RMLEERKVFLWGQVDDDSAKHVIDRLLYLDLQNNK-EIQLYINSPGGYVTSGFSIYDTIT 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+K P+ST C G AASMGS+LLSAG+KG RF P+AR+++HQPSGG GQAS+IE A++
Sbjct: 74 SLKSPVSTICSGLAASMGSILLSAGKKGRRFVQPHARVMIHQPSGGARGQASNIEIQAKE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+K + +I +NCG+ +E++ K +RD+ M A E+ ++G+VD +L
Sbjct: 134 ILKTREIGAQILAENCGQPFEKIMKDFNRDYWMDAKESVEYGIVDDILD 182
>gi|296936697|gb|ADH94369.1| photosystem II CP47 chlorophyll apoprotein [Syzygium cumini]
Length = 196
Score = 161 bits (408), Expect = 5e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|294811360|ref|ZP_06770003.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
gi|326439908|ref|ZP_08214642.1| ATP-dependent Clp protease, protease subunit [Streptomyces
clavuligerus ATCC 27064]
gi|294323959|gb|EFG05602.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
clavuligerus ATCC 27064]
Length = 220
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 114/195 (58%), Gaps = 1/195 (0%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P E+T G R+ D Y++LL+ RIVF+ ++D + AQ L LE P EISLY
Sbjct: 24 LPEFHERTPYGPRTLDPYAKLLEGRIVFLGTPVDDIAVGDVIAQFLHLEYAQPDGEISLY 83
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LL 137
INSPGG + A +AI+DT+Q I+ + T C+GQAA +LLL+AG G R LP ARI L
Sbjct: 84 INSPGGSLDAVLAIHDTVQLIRCTVETVCVGQAAGPAALLLAAGSPGRRLTLPGARIALS 143
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
GQ SD+E HA ++++ + + + ++ G+ V L+R ++ A+ A +
Sbjct: 144 GPALEKTVGQPSDLELHAAELLRQRTQFTGLLARHTGRDERRVAADLERTTVLDAAGALE 203
Query: 198 WGVVDKVLMSRIDIE 212
+G+VD++L R
Sbjct: 204 YGLVDQILSRRAATP 218
>gi|290489474|gb|ADD31121.1| clp protease proteolytic subunit protein [Quercus nigra]
Length = 196
Score = 161 bits (408), Expect = 6e-38, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL + R++F+ +++ ++ I +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AAS+GS LL GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F A + A++++K++ + +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAEEMMKLRETITRVYVQRTGTPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDHV 193
>gi|28261742|ref|NP_783256.1| ATP-dependent Clp protease proteolytic subunit [Atropa belladonna]
gi|75303626|sp|Q8S8W2|CLPP_ATRBE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|20068356|emb|CAC88069.1| ATP-dependent protease; catalytic subunit [Atropa belladonna]
Length = 196
Score = 161 bits (407), Expect = 6e-38, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ I ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE+ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ G+ Q + A++++K++ L +YV+ GK V + +++D MS
Sbjct: 121 ARVMMHQPASGYYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMEKDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|313199614|ref|YP_004021229.1| clp protease proteolytic subunit [Isoetes flaccida]
gi|291575343|gb|ADE18056.1| clp protease proteolytic subunit [Isoetes flaccida]
Length = 205
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+++RL +ER++F+ I+D +A L++L E+
Sbjct: 1 MPIGVPKVSLRIFGEEDIVWIDVHNRLYRERLLFLGQHIDDEIANQTICILMYLNGEDQS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V AG+++YD MQ+I P ++T C+G AASMGS +L+ GE R ALP+
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDIMQYIIPNVNTICVGLAASMGSFILAGGEITKRIALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP F QA + A++++K++ + +IYV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPGSSFYDGQAGECLVEAEEMLKLRDCVTKIYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+ D +
Sbjct: 181 AEEAKVYGITDPI 193
>gi|306486008|gb|ADM92652.1| clp protease proteolytic subunit protein [Davidia involucrata]
Length = 195
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + Q + A++++K++ L +Y + GK V + L+RD MS
Sbjct: 120 ARVMIHQPASSYYEAQTGEFILEAEELLKLRETLTRVYAQRTGKPLWVVSEDLERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 180 ATEAKAYGIVDLV 192
>gi|284052221|ref|ZP_06382431.1| ATP-dependent Clp protease-like protein [Arthrospira platensis str.
Paraca]
Length = 202
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 112/196 (57%), Gaps = 20/196 (10%)
Query: 39 LLKERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
LLKERI+++ + +D + LI AQLL+L+ +P+K I YINS G
Sbjct: 2 LLKERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYT 61
Query: 89 ---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
AI DT+ ++KPP+ T C+GQA +++LSAG KG R +LP+A I+L+Q
Sbjct: 62 GDAIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQ 121
Query: 140 PSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
P G QA+DI+ A++++ K + I KN G+ E++ K DR ++ A ++
Sbjct: 122 PRMGMGRSQATDIQIRAKEVLANKASILGILSKNTGQPVEKIAKDTDRMFYLTPEAAKEY 181
Query: 199 GVVDKVLMSRIDIEEK 214
G++D+VL S ++ ++
Sbjct: 182 GLIDRVLESTKELPKQ 197
>gi|258652073|ref|YP_003201229.1| endopeptidase Clp [Nakamurella multipartita DSM 44233]
gi|258555298|gb|ACV78240.1| Endopeptidase Clp [Nakamurella multipartita DSM 44233]
Length = 229
Score = 161 bits (407), Expect = 7e-38, Method: Composition-based stats.
Identities = 87/170 (51%), Positives = 116/170 (68%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RLL+ERI+ + ++ D A + AQLL L AE+P+++I+LYINSPGG VTAGMAIYDTM
Sbjct: 45 RLLRERIILLGSEVRDTNANELTAQLLLLAAEDPERDITLYINSPGGSVTAGMAIYDTMM 104
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+I+P ++T MG AASMG LL+AG KG R ALP+ RIL+HQPS G G A+DI A
Sbjct: 105 WIEPDVATTAMGLAASMGQFLLTAGAKGKRAALPHTRILMHQPSAGVGGTAADIAIQADM 164
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ K KR L E+ + G+ E +E DRD +A EA ++G +DKV+
Sbjct: 165 LTKSKRELTELQSLHTGQPIERIEVDQDRDRWFTAQEALEYGFIDKVVSR 214
>gi|91214166|ref|YP_538790.1| ATP-dependent Clp protease proteolytic subunit [Glycine max]
gi|122202485|sp|Q2PMR0|CLPP_SOYBN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83595767|gb|ABC25148.1| clp protease proteolytic subunit [Glycine max]
Length = 196
Score = 161 bits (407), Expect = 8e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DIY+RL +ER++F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPRVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKMRETITRVYVQRTGKPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|78103274|ref|YP_358605.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
gi|122213418|sp|Q3BAL3|CLPP_PHAAO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58802804|gb|AAW82524.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
Length = 204
Score = 160 bits (406), Expect = 8e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ I +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA D A++++K++ L ++YV+ G + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|157325555|ref|YP_001468333.1| ATP-dependent Clp protease proteolytic subunit [Ipomoea purpurea]
gi|157056783|gb|ABV02373.1| clp protease proteolytic subunit [Ipomoea purpurea]
Length = 204
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E DIY+RL +ER +F+ +I+ +A I L++L E+
Sbjct: 1 MPIGVPKVPFRNPGDEDASWIDIYNRLYRERFLFLVQEIDSEIANQIVGLLVYLNIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I LYINSPGG V +G+AIYD MQ ++P +ST C+G AASMGS +L+ G R A P+
Sbjct: 61 KDIFLYINSPGGDVISGVAIYDMMQTVRPGVSTICIGLAASMGSFILAGGAITRRAAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP F A ++ ++ +K++ R+ EIY + G + + +DRD S
Sbjct: 121 ARVMIHQPRTSFFESHAGELLLEMKEALKLRERIAEIYAQRTGNPTSIISRDMDRDVFFS 180
Query: 192 ASEACDWGVVDKV 204
A +A +G++D +
Sbjct: 181 ARQARIYGIIDDI 193
>gi|297846120|ref|XP_002890941.1| hypothetical protein ARALYDRAFT_890716 [Arabidopsis lyrata subsp.
lyrata]
gi|297336783|gb|EFH67200.1| hypothetical protein ARALYDRAFT_890716 [Arabidopsis lyrata subsp.
lyrata]
Length = 228
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 122/183 (66%), Gaps = 1/183 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 6 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 64
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G ++A MAIYD +Q ++ +ST +G AS S++L AG KG RFA+PN RI++HQP GG
Sbjct: 65 GSLSATMAIYDVVQLVRADVSTIALGIVASTASIILGAGTKGKRFAMPNTRIMIHQPLGG 124
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
S QA D+E A++++ K + I +++E+V K +DR+ MS EA ++G++D
Sbjct: 125 ASDQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRNRYMSPIEAVEYGLIDG 184
Query: 204 VLM 206
V+
Sbjct: 185 VID 187
>gi|282900570|ref|ZP_06308512.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194370|gb|EFA69325.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 229
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQIED----------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + + LI AQLL+L+ +NP K I YINS G
Sbjct: 25 DLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQLLYLKFDNPDKPIFFYINSTG 84
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IK P+ T C+GQA +L+LS G KG R +LP+A
Sbjct: 85 TSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIGTAALILSCGTKGFRASLPHAT 144
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+QP G GQA+DI+ +A++++ K + +I+ KN G+ E++ K ++R ++
Sbjct: 145 IVLNQPRSGTRGQATDIQIYAKEVLANKAAILDIFSKNTGQQPEKISKDMERMFYLTPQA 204
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL S D+ +
Sbjct: 205 AKEYGLIDRVLESMKDLPK 223
>gi|108802666|ref|YP_636324.1| ATP-dependent Clp protease proteolytic subunit [Eucalyptus globulus
subsp. globulus]
gi|122219170|sp|Q49KX3|CLPP_EUCGG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60460832|gb|AAX21052.1| photosystem II CP47 chlorophyll apoprotein [Eucalyptus globulus
subsp. globulus]
Length = 196
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|282896314|ref|ZP_06304336.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198810|gb|EFA73689.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 229
Score = 160 bits (406), Expect = 9e-38, Method: Composition-based stats.
Identities = 73/199 (36%), Positives = 116/199 (58%), Gaps = 19/199 (9%)
Query: 34 DIYSRLLKERIVFVTGQIED----------HMATLICAQLLFLEAENPQKEISLYINSPG 83
D+ S LLKERIV++ + + LI AQLL+L+ +NP+K I YINS G
Sbjct: 25 DLASLLLKERIVYLGTPLVSPDEYKRQMGVDVTKLIIAQLLYLKFDNPEKPIFFYINSTG 84
Query: 84 GVVTA---------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
AI DT+ +IK P+ T C+GQA +L+LS G KG R +LP+A
Sbjct: 85 TSWYTGDAIGYETEAFAICDTIDYIKTPVHTICIGQAIGTAALILSCGTKGFRASLPHAT 144
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I+L+QP G GQA+DI+ +A++++ K + +I+ KN G+ E++ K ++R ++
Sbjct: 145 IVLNQPRSGTRGQATDIQIYAKEVLSNKAAILDIFSKNTGQQPEKISKDMERMFYLTPQA 204
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A ++G++D+VL S D+ +
Sbjct: 205 AKEYGLIDRVLESMKDLPK 223
>gi|68052061|sp|Q5QA83|CLPP_ACOGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56122453|gb|AAV74350.1| ClpP [Acorus gramineus]
Length = 202
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V+ + E DIY+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+INSPGG V G+ +YDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD +S
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|290489446|gb|ADD31107.1| clp protease proteolytic subunit protein [Nelumbo nucifera]
Length = 202
Score = 160 bits (406), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/200 (37%), Positives = 123/200 (61%), Gaps = 5/200 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRID 210
A+EA G+VD V + + D
Sbjct: 181 ATEAQAHGIVDLVAVENNGD 200
>gi|290489434|gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba japonica]
Length = 198
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 121/195 (62%), Gaps = 6/195 (3%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARI--LLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
A+I ++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD
Sbjct: 121 AQIRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVF 180
Query: 190 MSASEACDWGVVDKV 204
MSA+EA +G+VD V
Sbjct: 181 MSATEAQAYGIVDLV 195
>gi|89280660|ref|YP_514877.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
gi|122201771|sp|Q2MI76|CLPP_SOLLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84372007|gb|ABC56324.1| clp protease proteolytic subunit [Solanum lycopersicum]
gi|89241696|emb|CAJ32419.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
Length = 206
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 114/193 (59%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP VV + DIY+RL +ER++F+ I ++ + +L+L E+
Sbjct: 1 MPIGVPRVVFRNPGDPISSWVDIYNRLYRERLLFLGQGIGTELSNQLIGLMLYLSMEDEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L++NSPGG V G+AIYDTMQF++P I T C+G AASMGS +L+ G+ R A P+
Sbjct: 61 KDLYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICLGLAASMGSFILAGGQLTKRIAFPH 120
Query: 133 ARIL-LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR++ SG + Q + A ++ K++ L +Y + G+ + + ++RD MS
Sbjct: 121 ARVMIHEPYSGFYMAQVGEFVLEAIEMAKLRETLTRVYAEKTGQPVWVIHEDMERDIFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDFV 193
>gi|302800375|ref|XP_002981945.1| hypothetical protein SELMODRAFT_233821 [Selaginella moellendorffii]
gi|302802337|ref|XP_002982924.1| hypothetical protein SELMODRAFT_234106 [Selaginella moellendorffii]
gi|300149514|gb|EFJ16169.1| hypothetical protein SELMODRAFT_234106 [Selaginella moellendorffii]
gi|300150387|gb|EFJ17038.1| hypothetical protein SELMODRAFT_233821 [Selaginella moellendorffii]
Length = 213
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 79/168 (47%), Positives = 114/168 (67%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL++R VF+ Q++D +A I +QLL L+A + +KEI ++IN PGG V+A M IYD +Q
Sbjct: 4 LLRQRTVFLGHQLDDFVADAIISQLLLLDAMDSKKEIRMFINCPGGSVSAAMGIYDAIQL 63
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ +ST G AAS S++L+ G KG RFA+PN RI++HQP GG SGQA D+E A++I
Sbjct: 64 CRAEVSTIAFGLAASTASVILAGGTKGKRFAMPNTRIMVHQPMGGASGQAIDVEIQAKEI 123
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ K I + GK +E+VEK +DRD MSA EA ++G++D V+
Sbjct: 124 MFHKNNFTRILAEITGKPFEQVEKDIDRDRYMSAVEAMEYGLIDGVID 171
>gi|158187126|gb|ABW22759.1| clp protease proteolytic subunit [Phaseolus vulgaris]
Length = 196
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 122/193 (63%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTN--RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V +T R DIY+RL +ER++F+ ++ ++ + + +++L E
Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDIYNRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+A+YDTMQF++P + T C+G AASMGS LL+ G R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ + +YV+ GK+ + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKMRETITRVYVQRTGKSLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|292559570|ref|YP_003540956.1| clpP-like protease [Phoenix dactylifera]
gi|290790978|gb|ADD63233.1| clpP-like protease [Phoenix dactylifera]
gi|294620602|gb|ADF28171.1| clpP-like protease [Phoenix dactylifera]
Length = 204
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 124/202 (61%), Gaps = 4/202 (1%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A+EA G+VD V + + +
Sbjct: 181 ATEAQVHGIVDLVAVENENTRD 202
>gi|166235575|gb|ABY85489.1| ATP-dependent protease proteolytic subunit [Silene samia]
Length = 196
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AI DTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|114329772|ref|YP_740590.1| clp protease proteolytic subunit [Platanus occidentalis]
gi|122166011|sp|Q09G21|CLPP_PLAOC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054410|gb|ABI49804.1| clp protease proteolytic subunit [Platanus occidentalis]
Length = 202
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|150397489|ref|YP_001327956.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
medicae WSM419]
gi|150029004|gb|ABR61121.1| Endopeptidase Clp [Sinorhizobium medicae WSM419]
Length = 195
Score = 160 bits (405), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + +I +++NSPGG V +G +I+D ++F
Sbjct: 24 LFKSRSIFIYGNITQELAQKVCSQLVALAAASDD-DIRIFVNSPGGHVESGDSIHDMIKF 82
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+KP + T G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 83 VKPKVWTIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 142
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I+ + G+ E++ K DRD+ + A EA +G+V +++ S +I
Sbjct: 143 IKMNERLNRIFSEATGQPVEKIAKDTDRDYWLGAEEAKAYGLVSRIVTSIAEI 195
>gi|332044615|gb|EGI80809.1| Endopeptidase Clp [Lacinutrix algicola 5H-3-7-4]
Length = 181
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 89/182 (48%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + + + D S+LL ER VF+ G ++D A + +LL+L++ + +I+LYINSPGG
Sbjct: 3 KTTKAQDAID--SKLLDERKVFLWGMVDDKSAKHVIDRLLYLDSLETK-DITLYINSPGG 59
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT+G A+YDT++ +K +ST C G AASMGS+LLS G KG RF P+AR+++HQPSGG
Sbjct: 60 YVTSGFAMYDTIKSLKSDVSTVCTGLAASMGSILLSVGTKGKRFIQPHARVMIHQPSGGA 119
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQASDIE AQ+I+K K +I +NCG+ +E+V K +RDH M A E+ D+G+VD +
Sbjct: 120 RGQASDIEITAQEILKTKELSAKILAENCGQDFEKVMKDFNRDHWMGAEESKDYGIVDGI 179
Query: 205 LM 206
L
Sbjct: 180 LD 181
>gi|323148930|ref|YP_004222484.1| clp protease proteolytic subunit [Smilax china]
gi|308742621|gb|ADO33472.1| clp protease proteolytic subunit [Smilax china]
Length = 204
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDKT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDFFLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ + ++YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETITKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQSHGIVDLV 193
>gi|34501388|ref|NP_904176.1| ATP-dependent Clp protease proteolytic subunit [Physcomitrella
patens subsp. patens]
gi|68052159|sp|Q6YXM7|CLPP_PHYPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34494758|dbj|BAC85025.1| ATP-dependent protease proteolytic subunit [Physcomitrella patens
subsp. patens]
Length = 199
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 123/194 (63%), Gaps = 5/194 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYS-RLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + E D+Y+ RL +ER++F+ ++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDE 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP
Sbjct: 61 NKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALP 120
Query: 132 NARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP S + GQA + A++++K++ + +YV+ GK + + ++RD M
Sbjct: 121 HARVMIHQPASSYYDGQAGECIMEAEEVLKLRDYITRVYVQRIGKPLWVISEDMERDVFM 180
Query: 191 SASEACDWGVVDKV 204
SA EA +G+VD V
Sbjct: 181 SAQEAKTYGIVDLV 194
>gi|9758729|dbj|BAB09167.1| ATP-dependent Clp protease-like protein [Arabidopsis thaliana]
Length = 301
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 10/192 (5%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E RG S D+ LL+ERIVF+ I+D +A I +QLL L+A++P+K+I L+INSPG
Sbjct: 70 ESAIRGAES-DVMGLLLRERIVFLGSSIDDFVADAIMSQLLLLDAKDPKKDIKLFINSPG 128
Query: 84 GV---------VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
G +A MAIYD +Q ++ +ST +G AAS S++L AG KG RFA+PN R
Sbjct: 129 GSLRLNVVIVWFSATMAIYDVVQLVRADVSTIALGIAASTASIILGAGTKGKRFAMPNTR 188
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++HQP GG SGQA D+E A++++ K + I +++E+V K +DRD MS E
Sbjct: 189 IMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSFEQVLKDIDRDRYMSPIE 248
Query: 195 ACDWGVVDKVLM 206
A ++G++D V+
Sbjct: 249 AVEYGLIDGVID 260
>gi|168064316|ref|XP_001784109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664360|gb|EDQ51083.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 230
Score = 160 bits (404), Expect = 1e-37, Method: Composition-based stats.
Identities = 76/174 (43%), Positives = 117/174 (67%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ +LK+RIVF+ Q++D +A I +QLL L+A +P KEI L++N PGG ++A MAI+
Sbjct: 14 DVMGLMLKQRIVFLGHQMDDFVADAIVSQLLLLDAVDPNKEIRLFVNCPGGSISAAMAIF 73
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D +Q + +ST C G AAS +++L+ G G R A+PN+RI++HQP GG SGQA D+E
Sbjct: 74 DAIQLCRADVSTICFGLAASTAAIVLAGGTPGKRLAMPNSRIMMHQPLGGASGQAIDVEI 133
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A++++ K + I + G+ E+VEK +DRD MS EA ++G++D V+
Sbjct: 134 QAKEVMYHKSNVTRILSEITGRAPEQVEKDIDRDRYMSPIEAMEYGIIDGVIDK 187
>gi|15966135|ref|NP_386488.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
meliloti 1021]
gi|307305688|ref|ZP_07585435.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C]
gi|307317691|ref|ZP_07597130.1| Endopeptidase Clp [Sinorhizobium meliloti AK83]
gi|7387587|sp|Q9X7L1|CLPP3_RHIME RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|4539549|emb|CAB39976.1| CLP protease proteolytic subunit [Sinorhizobium meliloti]
gi|15075405|emb|CAC46961.1| CLP protease proteolytic subunit [Sinorhizobium meliloti 1021]
gi|306896849|gb|EFN27596.1| Endopeptidase Clp [Sinorhizobium meliloti AK83]
gi|306902391|gb|EFN32987.1| Endopeptidase Clp [Sinorhizobium meliloti BL225C]
Length = 195
Score = 160 bits (404), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 109/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L A + +I L++NSPGG V +G +I+D ++F
Sbjct: 24 LFKSRSIFIYGTITQELAQKVCSQLVALAAASDD-DIRLFVNSPGGHVESGDSIHDMIKF 82
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+KP + T G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 83 VKPKVWTIGTGWVASAGALIYVAAPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 142
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I+ + G+ +++ K DRD+ + A EA +G+V +++ S +I
Sbjct: 143 IKMNERLNRIFSEATGQPVDKIAKDTDRDYWLGAEEAKAYGLVSRIVTSIAEI 195
>gi|324986430|ref|YP_004276301.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|228016061|gb|ACP50899.1| ATP-dependent Clp protease proteolytic subunit [Pinus rzedowskii]
gi|323522525|gb|ADX94867.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
Length = 196
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I L+IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFLFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A++ A+ I ++ + + YV+ E +++ LDRD MS
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYVERTDNPEEVIQRDLDRDIFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEARAYGIVDTVAE 195
>gi|34500938|ref|NP_904123.1| ATP-dependent Clp protease proteolytic subunit [Amborella
trichopoda]
gi|68052165|sp|Q70XY2|CLPP_AMBTC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481653|emb|CAD45131.1| ATP-dependent protease proteolytic subunit [Amborella trichopoda]
Length = 202
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + DIY+RL +ER++F+ ++E ++ I +++L E+
Sbjct: 1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYD MQF+ P + T CMG AASMGS +L+ GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F A + A +++K++ + +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD +
Sbjct: 181 ATEAQAHGIVDLI 193
>gi|313199727|ref|YP_004021341.1| clp protease proteolytic subunit [Theobroma cacao]
gi|309321291|gb|ADO64834.1| clp protease proteolytic subunit [Theobroma cacao]
gi|328924805|gb|ADO64915.2| clp protease proteolytic subunit [Theobroma cacao]
Length = 196
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E DIY+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE+ L+INSPGG + G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KELYLFINSPGGWIIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDIFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|228017007|gb|ACP51830.1| ATP-dependent Clp protease proteolytic subunit [Pinus canariensis]
gi|228017448|gb|ACP52264.1| ATP-dependent Clp protease proteolytic subunit [Pinus merkusii]
Length = 196
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 117/195 (60%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + + Y++ G+ E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGQPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|224551502|gb|ACN54193.1| Clp-P protease subunit [Triticum aestivum]
Length = 266
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 68/197 (34%), Positives = 120/197 (60%), Gaps = 4/197 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G D+ + LL RI+F+ + +A + +QL+ L A +
Sbjct: 72 SENENPPLMPAIM--TPGGP--LDLATVLLGNRIIFIGQYVNSQVAQRVISQLVTLSAID 127
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ +I +Y+N PGG + + +AIYD M +I P + T C G AS +++L+ GEKGMR+A+
Sbjct: 128 EEGDILIYLNCPGGSLYSILAIYDCMSWISPKVGTVCFGVVASQAAIILAGGEKGMRYAM 187
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
PNAR+++HQP GG G ++ R + + + ++++++ G+ + V + +RD M
Sbjct: 188 PNARVMIHQPQGGSEGNTEEVRRQVGETIYARDKVDKMFASFTGRPIDIVRQWTERDRFM 247
Query: 191 SASEACDWGVVDKVLMS 207
S+SEA D+G+VD +L +
Sbjct: 248 SSSEAMDFGLVDALLET 264
>gi|71000128|ref|XP_754781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
fumigatus Af293]
gi|66852418|gb|EAL92743.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
fumigatus Af293]
gi|159127789|gb|EDP52904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Aspergillus
fumigatus A1163]
Length = 175
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 91/164 (55%), Positives = 126/164 (76%), Gaps = 4/164 (2%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
M+ I AQLLFLEA+NPQK I LYINSPGG VTAG+AIYDTM +I P+ST C+GQAASM
Sbjct: 1 MSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-C 173
GSLLL G+ G R+ LP++ I++HQPSGG+ GQASDI HA++I++++ +LN+IY ++
Sbjct: 61 GSLLLCGGDPGKRYCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRVRNQLNKIYQRHLT 120
Query: 174 GK---TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
GK + EE+EK ++RD+ M A EA + G+VD++L R+ + +
Sbjct: 121 GKKVLSLEEIEKLMERDYFMGAQEALEMGIVDEILDRRVKPQNE 164
>gi|160332321|sp|P56772|CLPP1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase ClpP1; Short=pClpP
Length = 196
Score = 159 bits (403), Expect = 2e-37, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|32480867|ref|NP_862778.1| ATP-dependent Clp protease proteolytic subunit [Calycanthus
floridus var. glaucus]
gi|68052187|sp|Q7YJV2|CLPP_CALFG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|32399403|emb|CAD28745.1| ATP-dependent protease proteolytic subunit [Calycanthus floridus
var. glaucus]
Length = 202
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 121/200 (60%), Gaps = 5/200 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRID 210
A+EA G+VD V + + D
Sbjct: 181 ATEAQAHGIVDLVAIENTGD 200
>gi|294056505|ref|YP_003550163.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
gi|293615838|gb|ADE55993.1| Endopeptidase Clp [Coraliomargarita akajimensis DSM 45221]
Length = 193
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 74/170 (43%), Positives = 107/170 (62%), Gaps = 2/170 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R +F+ G++ D A + +LLFLE E P +EI+ YIN+PGG +TAGMAIYDTM+ I
Sbjct: 23 LKNRKIFLWGEVSDKSAKDVTEKLLFLEMEAPGEEITFYINTPGGSITAGMAIYDTMKLI 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHAQD 157
PI G AASMGS+LL KG R P++R+L+HQP A DI A++
Sbjct: 83 SSPIKVVVTGMAASMGSILLCGASKGKRVLYPHSRVLIHQPLISGQMVAVAVDIHIQAKE 142
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ +++ LN I ++ G+ E++EK DRD M+A EA D+G+ D+++
Sbjct: 143 MERLRDELNAILAESSGQPLEQIEKDTDRDFYMTAKEAIDYGLADEIVEK 192
>gi|119368524|ref|YP_913212.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
gi|125863802|sp|A0ZZ60|CLPP_GOSBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119224886|dbj|BAF41272.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
Length = 196
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL+ GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++R+ MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERNVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|317134129|ref|YP_004123449.1| ClpP [Rhizanthella gardneri]
gi|255985060|gb|ACU46607.1| ClpP [Rhizanthella gardneri]
Length = 195
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V + E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGLPKVPFRIPGEEDAIWIDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G++IYDTMQF+ P + T C+G AAS+GSL+L GE R A P+
Sbjct: 61 RDLHLFINSPGGWVIPGISIYDTMQFVPPTVHTVCIGLAASIGSLILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++ +K++ + ++YV+ K + K ++RD MS
Sbjct: 121 ARVMIHQPASSFYESQVGEFILEAEEFLKLRETILKVYVQRTSKPLFVISKDIERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 AKEALAYGIVDLV 193
>gi|115443583|ref|YP_778602.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
gi|122227446|sp|Q06J25|CLPP_BIGNA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110810228|gb|ABG91434.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
Length = 195
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 80/195 (41%), Positives = 132/195 (67%), Gaps = 3/195 (1%)
Query: 16 LGL-VPMVV--EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V+ E T+ + DIY+RL K+RI+F+ ++D + I + LL L++E+ +
Sbjct: 1 MPIGIPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKE 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+ I YINS GG V +G++IYDTM FI I T C+G A+S+ SL+L+ G++ RF LP+
Sbjct: 61 ELIYFYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+R+LLHQP SGQASDI +++I++++R L +IY++N +T V + +DRD +S+
Sbjct: 121 SRVLLHQPIMQVSGQASDILIESEEILRLRRILTKIYIENIDQTISRVARDIDRDCFLSS 180
Query: 193 SEACDWGVVDKVLMS 207
EA ++G+VD +L +
Sbjct: 181 REAKNYGIVDYILTN 195
>gi|71033841|ref|XP_766562.1| ATP-dependent Clp protease proteolytic subunit [Theileria parva
strain Muguga]
gi|68353519|gb|EAN34279.1| ATP-dependent Clp protease proteolytic subunit, putative [Theileria
parva]
Length = 181
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 68/170 (40%), Positives = 110/170 (64%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL +ERI+FV+ ++D + A +L L+ E +K I+LYINSPGG + +G+++YDT++
Sbjct: 4 RLFRERILFVSQPLDDEYVNQLIAAILCLDNETSEKPITLYINSPGGNMHSGLSLYDTLK 63
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
++ I T +G AS +LLL AG G R+ L ++R+LL QPSG G A I+ AQ
Sbjct: 64 HVRSEIVTINVGLCASTATLLLGAGTPGKRYGLKHSRVLLLQPSGLAEGTAEQIKIEAQH 123
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
I++IKR L EIY + YE++ ++RD+ MS+ E +G++D+++ +
Sbjct: 124 ILEIKRNLVEIYSNITKQPYEKIASDIERDNFMSSEEYKSYGLIDEIITN 173
>gi|290489478|gb|ADD31123.1| clp protease proteolytic subunit protein [Trochodendron aralioides]
Length = 202
Score = 159 bits (402), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|254431834|ref|ZP_05045537.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626287|gb|EDY38846.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 232
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 116/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI--EDH--------MATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDEAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWFTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGQRAALPHATIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ AQ+++ KR + ++ N GK+ E++ K DR ++A +A D+G++
Sbjct: 147 SGAQGQASDIQIRAQEVLHNKRTMLQMLADNTGKSVEQLSKDSDRMTYLTAEQAKDYGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL S+ D+
Sbjct: 207 DRVLTSQKDVP 217
>gi|220906938|ref|YP_002482249.1| ATP-dependent Clp protease-like protein [Cyanothece sp. PCC 7425]
gi|219863549|gb|ACL43888.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 218
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 109/176 (61%), Gaps = 9/176 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA---------GMA 91
KERIV++ + + LI A+LLFL+ ++P+K I +YINS G A
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLFLQYDDPEKPIKIYINSTGTSRYDGEPIGFETEAFA 90
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I DTM++IKPPI T C+GQA M ++LLSAG KG R +LPNA I+LHQ GQA+DI
Sbjct: 91 ICDTMRYIKPPIHTICIGQAMGMAAMLLSAGTKGCRASLPNATIVLHQTRSYARGQATDI 150
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ A++++ + + +I +N G+ E++ K +DR M+ +A ++G++D+VL
Sbjct: 151 QIRAREVLANREIMIDILSRNTGQPPEKISKDMDRLFYMTPQQAVEYGLIDRVLEK 206
>gi|166235685|gb|ABY85594.1| ATP-dependent protease proteolytic subunit [Silene integripetala]
Length = 196
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AI DTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK+ V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKSTWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|302824555|ref|XP_002993920.1| hypothetical protein SELMODRAFT_137715 [Selaginella moellendorffii]
gi|300138287|gb|EFJ05061.1| hypothetical protein SELMODRAFT_137715 [Selaginella moellendorffii]
Length = 224
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/170 (41%), Positives = 111/170 (65%), Gaps = 1/170 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+RL +ER++F+ ++D +A I +++L EN K+I LYINSPGG V AG+++YD M
Sbjct: 43 NRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRSKDIYLYINSPGGAVLAGISVYDMM 102
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASDIERHA 155
QF+ P + T C+G AASMGS +L+ G R ALP+AR+++HQP+ F QA + A
Sbjct: 103 QFVVPDVHTICVGLAASMGSFILTGGGITKRIALPHARVMIHQPASSFYEGQAGECLMEA 162
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++I+K++ + IY + GK V + ++RD MSA EA +G++D V+
Sbjct: 163 EEILKLRDCITSIYARKTGKPLWVVSEDMERDVFMSAREARVYGIIDLVV 212
>gi|228016444|gb|ACP51276.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. insularis]
gi|228016508|gb|ACP51339.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. torreyana]
Length = 196
Score = 159 bits (401), Expect = 3e-37, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLIGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + + Y++ G E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|237688522|ref|YP_002905140.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
gi|226875351|gb|ACO89089.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
Length = 205
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 119/195 (61%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I + +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KEI +IN PGG V G+ ++D MQ I P ++T CMG AASMGS +L GE R ALP+
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + E Y++ G+ E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|228016943|gb|ACP51767.1| ATP-dependent Clp protease proteolytic subunit [Pinus banksiana]
Length = 204
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I + +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KEI +IN PGG V G+ ++D MQ I P ++T CMG AASMGS +L GE R LP+
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIVLPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + + Y++ G+ E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITKCYIERTGQPEEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|295311752|ref|YP_003587490.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
gi|281188266|gb|ACT83132.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
Length = 203
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+V+ V
Sbjct: 181 ATEAQAHGIVNLV 193
>gi|290489444|gb|ADD31106.1| clp protease proteolytic subunit protein [Meliosma aff. cuneifolia
Moore 333]
Length = 202
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + D+Y+RL +ER++F+ +E ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQGVESEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|156085800|ref|XP_001610309.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis
T2Bo]
gi|154797562|gb|EDO06741.1| ATP-dependent Clp protease proteolytic subunit , putative [Babesia
bovis]
Length = 200
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 126/191 (65%), Gaps = 2/191 (1%)
Query: 19 VPMVVEQTNRGERS--YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP+V + +RS +DI++RL +ERI+FV+ +++ +I LL L++++ +K I+
Sbjct: 6 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 65
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINS GG TAG+ +YDT++ +K I+T +G ++ SLLL++G GMR ALP++R++
Sbjct: 66 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 125
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP+G G A I AQ ++ +KR L ++Y + + + + K L+R+ MSA E+
Sbjct: 126 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMSAEESL 185
Query: 197 DWGVVDKVLMS 207
+G+VD+++ +
Sbjct: 186 QYGLVDRIIRT 196
>gi|255030442|ref|ZP_05302393.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes LO28]
Length = 146
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 89/146 (60%), Positives = 117/146 (80%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ L+P V+EQT+RGER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I
Sbjct: 1 MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG ++AGMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I
Sbjct: 61 FLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEI 120
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKI 161
++HQP GG GQA++IE A+ I+KI
Sbjct: 121 MIHQPLGGAQGQATEIEIAARHILKI 146
>gi|170077810|ref|YP_001734448.1| ATP-dependent Clp protease-like protein [Synechococcus sp. PCC
7002]
gi|169885479|gb|ACA99192.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 228
Score = 158 bits (400), Expect = 4e-37, Method: Composition-based stats.
Identities = 73/192 (38%), Positives = 111/192 (57%), Gaps = 19/192 (9%)
Query: 41 KERIVFVT----------GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ QI + LI AQLLFL+ ++P K I +YINS G
Sbjct: 32 KERIVYLGLPLVSPDEYKDQIGVDVTELIIAQLLFLQFDDPDKPIYMYINSTGTSWYGGD 91
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +I PP+ T C+GQA +++L+AG KG R +LP++ I+LHQ
Sbjct: 92 SIGFETEAFAICDTLNYITPPVHTICLGQAMGTAAMILAAGTKGCRASLPHSTIILHQAR 151
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ A+++++ KR + ++ K G+ E++EK DR M+ +A ++G++
Sbjct: 152 QGAQGQASDIQIRAKEVIENKRTILQMMSKYTGQPLEKLEKDTDRMFYMTPQQALEYGII 211
Query: 202 DKVLMSRIDIEE 213
DKVL S D+
Sbjct: 212 DKVLESSKDLPS 223
>gi|269795808|ref|YP_003315263.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
gi|269097993|gb|ACZ22429.1| ATP-dependent Clp protease proteolytic subunit ClpP [Sanguibacter
keddieii DSM 10542]
Length = 212
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 78/172 (45%), Positives = 113/172 (65%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ S L+ R+V V +I+D +AT +C+QLL L AE+P ++ L I+SPGG V+AG+A+YD
Sbjct: 21 LTSGLMFRRVVVVGQEIDDDLATRVCSQLLLLSAEDPDADVVLLISSPGGSVSAGLAMYD 80
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
M+ I +ST +G AASMG LLSAG +G RFALP+AR+L+HQ S G G A DI
Sbjct: 81 VMRLIPNDVSTVALGTAASMGQFLLSAGTRGKRFALPHARVLMHQGSAGLQGTAVDIAIQ 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A+++ K+ + + ++ G+ Y+ VE+ DRD +A EA D+G VD V
Sbjct: 141 AENLEHTKKVMLTLIAEHTGQPYDRVERDSDRDRWFTADEALDYGFVDAVAT 192
>gi|110227104|ref|YP_665583.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|134093226|ref|YP_001109527.1| ATP-dependent Clp protease proteolytic subunit [Populus
trichocarpa]
gi|122224626|sp|Q14FD2|CLPP_POPAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380562|sp|A4GYT6|CLPP_POPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109945542|dbj|BAE97230.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|133712088|gb|ABO36731.1| ATP-dependent CLP protease proteolytic subunit [Populus
trichocarpa]
Length = 196
Score = 158 bits (399), Expect = 5e-37, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 118/194 (60%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER---SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE D+Y+RL +ER++F+ I+ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNP-GEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESE 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G+ R A P
Sbjct: 60 IKDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFP 119
Query: 132 NARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP F Q + A++++K++ L +Y + GK V + ++RD M
Sbjct: 120 HARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SAAEAQVHGIVDLV 193
>gi|254293120|ref|YP_003059143.1| endopeptidase Clp [Hirschia baltica ATCC 49814]
gi|254041651|gb|ACT58446.1| Endopeptidase Clp [Hirschia baltica ATCC 49814]
Length = 198
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R + +TG I+D+ A +C +LL L +E+ I L ++SPGG V +G I+D ++F
Sbjct: 25 LFKARTILLTGGIDDNQARRVCERLLALSSESAD-PILLVLSSPGGHVESGDMIHDMIKF 83
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ P+ G AS G+L+ +A +K RFA PN R LLH+P GG GQASD+E A++I
Sbjct: 84 VPAPVKVLGTGWVASAGALIYAAAQKENRFASPNTRFLLHEPRGGVGGQASDVEIQAREI 143
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K++ RLN I+ + GK +++++ DRD MSA EA +G+V K++ S+ +I
Sbjct: 144 IKMRERLNNIFAEATGKPLKKIQEDTDRDFWMSAEEAVKYGLVGKIVTSQKEI 196
>gi|303285882|ref|XP_003062231.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456642|gb|EEH53943.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 195
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 73/170 (42%), Positives = 113/170 (66%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+R +F+ G+++D A + ++LFL+A +P+ I LY+NS GGVVT+G+AIYD MQ ++P
Sbjct: 3 QRRIFLNGRVDDKSAHSLVGKMLFLDAVDPETPIVLYVNSGGGVVTSGLAIYDVMQHVRP 62
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
P+ T C+G A SM ++LL AGEKG R+ LPNAR+++HQP SGQ +DI A
Sbjct: 63 PVYTVCIGHAESMAAVLLCAGEKGHRYVLPNARVMVHQPHHVISGQTTDILIKATKAEHT 122
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ L +I K+ G++ EV L+RD M+A+EA +G+ D+V+ ++
Sbjct: 123 RTTLRDIIAKHSGRSAGEVIGVLERDTYMTAAEAVTFGLADEVITHIGEL 172
>gi|29565593|ref|NP_817171.1| ATP-dependent Clp protease proteolytic subunit [Pinus koraiensis]
gi|237688459|ref|YP_002905078.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|237688591|ref|YP_002905208.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|237688659|ref|YP_002905275.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|324986358|ref|YP_004276230.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|68052195|sp|Q85X43|CLPP_PINKO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29469692|gb|AAO74020.1| ATP-dependent protease subunit [Pinus koraiensis]
gi|226875288|gb|ACO89027.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|226876052|gb|ACO89308.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|226951117|gb|ACO94180.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|228016125|gb|ACP50962.1| ATP-dependent Clp protease proteolytic subunit [Pinus sibirica]
gi|228016182|gb|ACP51018.1| ATP-dependent Clp protease proteolytic subunit [Pinus squamata]
gi|228016247|gb|ACP51082.1| ATP-dependent Clp protease proteolytic subunit [Pinus strobus]
gi|228016623|gb|ACP51452.1| ATP-dependent Clp protease proteolytic subunit [Pinus albicaulis]
gi|228016756|gb|ACP51583.1| ATP-dependent Clp protease proteolytic subunit [Pinus armandii]
gi|228016879|gb|ACP51704.1| ATP-dependent Clp protease proteolytic subunit [Pinus ayacahuite]
gi|228017126|gb|ACP51947.1| ATP-dependent Clp protease proteolytic subunit [Pinus cembra]
gi|228017247|gb|ACP52066.1| ATP-dependent Clp protease proteolytic subunit [Pinus flexilis]
gi|228017313|gb|ACP52131.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|228017506|gb|ACP52321.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|228017569|gb|ACP52383.1| ATP-dependent Clp protease proteolytic subunit [Pinus parviflora
var. pentaphylla]
gi|228017633|gb|ACP52446.1| ATP-dependent Clp protease proteolytic subunit [Pinus peuce]
gi|257042530|gb|ACV32804.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042558|gb|ACV32831.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042587|gb|ACV32859.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042617|gb|ACV32888.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042645|gb|ACV32915.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042673|gb|ACV32942.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042702|gb|ACV32970.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042730|gb|ACV32997.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042757|gb|ACV33023.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042785|gb|ACV33050.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|323514207|gb|ADX89754.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
Length = 196
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A++ A+ I ++ + + Y++ E +++ LDRD MS
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEARAYGIVDTVAE 195
>gi|227822887|ref|YP_002826859.1| ATP-dependent Clp protease proteolytic subunit [Sinorhizobium
fredii NGR234]
gi|227341888|gb|ACP26106.1| ATP-dependent Clp protease proteolytic subunit 3 [Sinorhizobium
fredii NGR234]
Length = 197
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C+QL+ L + + + +I +++NSPGG V +G +I+D ++F
Sbjct: 26 LFKSRSIFIYGTITQELAQKVCSQLVALASASDE-DIRIFVNSPGGHVESGDSIHDMIKF 84
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+KP + T G AS G+L+ A K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 85 VKPKVRTIGTGWVASAGALIFVAPPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 144
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN+I+ + G+ E++ K DRD+ + A EA +G+V +++ S +I
Sbjct: 145 IKMNERLNKIFSEATGQPVEKIAKDTDRDYWLGADEAKSYGLVSRIVTSVAEI 197
>gi|255081202|ref|XP_002507823.1| predicted protein [Micromonas sp. RCC299]
gi|226523099|gb|ACO69081.1| predicted protein [Micromonas sp. RCC299]
Length = 174
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 79/172 (45%), Positives = 115/172 (66%)
Query: 36 YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
Y++LL +R +F+ G+++D A + ++LFL+A +P K I +YINS GGVVT+G+AIYD
Sbjct: 2 YAQLLTQRRIFLNGRVDDKSAHTLVGKMLFLDAADPTKPIVMYINSGGGVVTSGLAIYDV 61
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
MQ ++PP+ T C+G A SM ++LL AGEKG R+ALPN+RI++HQP SGQ +DI A
Sbjct: 62 MQHVRPPVYTVCLGHAESMAAVLLCAGEKGHRYALPNSRIMIHQPHHVVSGQTTDIIIKA 121
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + L+ I + GK EV L+RD M+ASEA +G+VD +
Sbjct: 122 KKAEHTRETLSAIIQAHSGKGEGEVNAALERDTYMTASEAKKFGIVDHTVTR 173
>gi|119492479|ref|XP_001263605.1| Clp protease, putative [Neosartorya fischeri NRRL 181]
gi|119411765|gb|EAW21708.1| Clp protease, putative [Neosartorya fischeri NRRL 181]
Length = 175
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 91/164 (55%), Positives = 125/164 (76%), Gaps = 4/164 (2%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
M+ I AQLLFLEA+NPQK I LYINSPGG VTAG+AIYDTM +I P+ST C+GQAASM
Sbjct: 1 MSASIVAQLLFLEADNPQKPIHLYINSPGGSVTAGLAIYDTMTYIASPVSTICVGQAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-C 173
GSLLL G G R+ LP++ I++HQPSGG+ GQASDI HA++I++++ +LN+IY ++
Sbjct: 61 GSLLLCGGNPGKRYCLPHSSIMIHQPSGGYFGQASDIAIHAKEILRVRSQLNKIYQRHLT 120
Query: 174 GK---TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
GK + EE+EK ++RD+ M A EA + G+VD++L R+ + +
Sbjct: 121 GKKVLSLEEIEKLMERDYFMGAQEALEMGIVDEILDRRVKPQNE 164
>gi|323454123|gb|EGB09993.1| hypothetical protein AURANDRAFT_58799 [Aureococcus anophagefferens]
Length = 241
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 112/185 (60%), Gaps = 2/185 (1%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
DIY RL ++RI+ V +++ A + A LL+L E+P+K IS+Y N PG ++ +A+Y
Sbjct: 48 DIYQRLYRDRIMLVGNFLDEEQANSLIAVLLYLRFEDPKKPISIYFNVPGALMKPCLAVY 107
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--GGFSGQASDI 151
DT+Q ++ P++T +G A MG+ L AG KG R+ALPNAR L+ + F GQASDI
Sbjct: 108 DTLQTLECPVTTVNLGLATGMGAFLCGAGTKGCRYALPNARFLMQRTGLDDPFQGQASDI 167
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++ ++ R+ + VK G + + + + + RD +SA EA +G++DKVL+ +
Sbjct: 168 GLVVRENLRDNDRMEKALVKMTGNSIDVIHQDMKRDFYLSAHEAVQYGLIDKVLIPQPKN 227
Query: 212 EEKSK 216
+ K
Sbjct: 228 LGRDK 232
>gi|149390466|ref|YP_001294295.1| clp protease proteolytic subunit [Illicium oligandrum]
gi|160380554|sp|A6MMW9|CLPP_ILLOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|147917419|gb|ABQ52543.1| clp protease proteolytic subunit [Illicium oligandrum]
Length = 202
Score = 158 bits (399), Expect = 6e-37, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS LL+ GE R A P+
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +Y + G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYAQRTGNPLWVVFEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|324986501|ref|YP_004276371.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
gi|323522689|gb|ADX94937.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
Length = 196
Score = 157 bits (398), Expect = 7e-37, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A++ A+ I ++ + + Y++ E +++ LDRD MS
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRTYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDTVAE 195
>gi|158311882|ref|YP_001504390.1| endopeptidase Clp [Frankia sp. EAN1pec]
gi|158107287|gb|ABW09484.1| Endopeptidase Clp [Frankia sp. EAN1pec]
Length = 205
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 78/162 (48%), Positives = 110/162 (67%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
FV ++D +A +CAQLL L + +++ISLYINSPGG V AGMAIYDTMQFI+ ++T
Sbjct: 34 FVGAAVDDALANRVCAQLLLLAQASRRQDISLYINSPGGSVDAGMAIYDTMQFIENDVAT 93
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
+ +G AASMG LL+AG G RFALPN+RI++HQP GG G ASDI A+ + +RR+
Sbjct: 94 YALGLAASMGQFLLTAGTAGKRFALPNSRIMMHQPHGGVGGTASDIAIQAEQALHTRRRM 153
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
E+ ++ G + E+ DRD +A+ A ++G+VD V+
Sbjct: 154 QELIAEHSGHSVAEIAADSDRDRWFTAAAAKEYGLVDAVVEH 195
>gi|91984016|ref|YP_567102.1| ATP-dependent Clp protease proteolytic subunit [Vitis vinifera]
gi|122230336|sp|Q0ZIZ4|CLPP_VITVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91701674|gb|ABE47558.1| clp protease proteolytic subunit [Vitis vinifera]
Length = 196
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + D+Y+RL +ER++F+ ++E ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ +INSPGG V G+AIYDTMQF+ P + T C+G AASMGS +L G R A P+
Sbjct: 61 KDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ + ++YV+ GK V + L+RD MS
Sbjct: 121 ARVMIHQPAAAFYEAQAGEFVMEAEELLKLREIITKVYVQRTGKPLWVVSEDLERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|228017699|gb|ACP52511.1| ATP-dependent Clp protease proteolytic subunit [Pinus pinaster]
Length = 202
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 75/195 (38%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINGEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KEI +IN PGG V G+A++D MQ I P ++T CMG AASMGS +L GE R ALP+
Sbjct: 61 KEIFSFINCPGGSVIPGVALFDMMQAIVPDVNTICMGVAASMGSFILIGGEMHQRLALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP S + G A+D ++ + ++ + E Y+ G+ E +++ L+RD MS
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIDRTGQPEEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAKAYGIVDVVAE 195
>gi|309322383|ref|YP_003934463.1| ATP-dependent Clp protease proteolytic subunit [Cathaya
argyrophylla]
gi|307683309|dbj|BAJ19616.1| ATP-dependent Clp protease proteolytic subunit [Cathaya
argyrophylla]
Length = 196
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINPEIANQVTGLMVYLSAEDAD 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I ++N PGG V +G+ ++D MQ I P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDIFSFLNCPGGSVISGVGLFDIMQVIVPDVHTICMGVAASMGSFVLIGGEISKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQPS + A++ + + ++ + + Y++ GK+ E +++ LDRD MS
Sbjct: 121 ARIMIHQPSSSYYDGPAAEFLNEVKHVTMLRDYITKCYIERTGKSGEVIQRDLDRDVYMS 180
Query: 192 ASEACDWGVVDKVLM 206
A EA +G+VD V
Sbjct: 181 AREARAYGIVDAVAE 195
>gi|228015924|gb|ACP50764.1| ATP-dependent Clp protease proteolytic subunit [Pinus taeda]
gi|228016306|gb|ACP51140.1| ATP-dependent Clp protease proteolytic subunit [Pinus ponderosa]
gi|228016819|gb|ACP51645.1| ATP-dependent Clp protease proteolytic subunit [Pinus attenuata]
gi|228017185|gb|ACP52005.1| ATP-dependent Clp protease proteolytic subunit [Pinus leiophylla
var. chihuahuana]
Length = 196
Score = 157 bits (398), Expect = 8e-37, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + + Y++ G E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|159466488|ref|XP_001691441.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158279413|gb|EDP05174.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 283
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 4/195 (2%)
Query: 18 LVPMVVEQTNRGERS--YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ P + Q GE + D+Y LL RI+F+ G I D MAT I L+ LEA + ++I
Sbjct: 60 VTPDI--QIGHGEDAIEMDLYRYLLSNRIIFIGGYINDKMATQIVGSLMALEAVDENEDI 117
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGG + + + D MQ IKP + T +G S SL+++AG KG R+A+ N R+
Sbjct: 118 RIYINSPGGQPYSVLGVVDAMQSIKPDVQTVALGACYSYASLVVAAGTKGKRYAMKNTRL 177
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++ QP GG G I+ +++ + + + Y+K G +++E+ RDH M+ +A
Sbjct: 178 MMTQPMGGSQGDIYQIKATVEELNALYQIFSRYYMKFTGMNQDQIEQATCRDHFMTPEQA 237
Query: 196 CDWGVVDKVLMSRID 210
G++D+++ + D
Sbjct: 238 KLEGLIDEIIRGKGD 252
>gi|284052220|ref|ZP_06382430.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569211|dbj|BAI91483.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 213
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 71/205 (34%), Positives = 121/205 (59%), Gaps = 15/205 (7%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP + + + +IY+RL +ERI+F+ + +A + + +L+L++++ K I +Y
Sbjct: 9 VPYQIPGSQY-WQWVNIYTRLSQERIIFLNQPLTTGVANSLVSSMLYLDSDDHNKPIYMY 67
Query: 79 INSPGG--------------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
INS G V A +A+YDTMQ IK I T C+GQA M +LLLS G K
Sbjct: 68 INSIGDPVLAGMANESMGMMSVMAALAVYDTMQHIKSEIVTICLGQAVGMAALLLSCGSK 127
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R +LPN+ I L+ P G GQA+DI+ A++I+ + + +I+ +N G+ E++ K +
Sbjct: 128 GKRASLPNSMITLYNPQTGTQGQATDIQVTAEEILSKRVLMMDIFHQNTGQPVEKLTKDM 187
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
+R M+ +A ++G++D+VL ++
Sbjct: 188 NRTFYMTPEQAKEYGIIDRVLTTQK 212
>gi|290489460|gb|ADD31114.1| clp protease proteolytic subunit protein [Euonymus americanus]
Length = 197
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP + + GE DIY+RL +ER++F+ I H+A + A +L+L E+
Sbjct: 1 MPIGVPRIPFRNP-GENASSWVDIYNRLYRERLLFLGQIINTHLANQLIALILYLTMESD 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V G+A+YDTMQF++P + T C+G AASMGS +L G+ R A P
Sbjct: 60 TKDLYLFINSPGGWVIPGIALYDTMQFVRPDVQTICLGLAASMGSFILVGGKITKRLAFP 119
Query: 132 NARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP F Q + A++++K++ + +YV+ GK V + ++RD M
Sbjct: 120 HARVMIHQPFSAFFMAQVGEFVLEAEELLKLRETITRVYVQRTGKPLWMVSEDMERDAFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD+V
Sbjct: 180 SATEAQAHGIVDRV 193
>gi|153805564|ref|YP_001382140.1| ATP-dependent Clp protease proteolytic subunit [Leptosira
terrestris]
gi|160380555|sp|A6YG63|CLPP_LEPTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134270095|gb|ABO69284.1| proteolytic subunit 2 of clp protease [Leptosira terrestris]
Length = 196
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 119/192 (61%), Gaps = 3/192 (1%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V E D+Y L +ER++ + G + D I + L++L +
Sbjct: 1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE +YINSPGG VT+G+AIYD M+F P++T +G +ASM S +L+ G+ G R A P+
Sbjct: 61 KEFFIYINSPGGSVTSGIAIYDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQ+S+I AQ++V+I+R++ IY + G+ + + + +DRD MSA
Sbjct: 121 SRIMIHQPEGGSEGQSSEIVHEAQEVVRIRRQVARIYAQRTGQPLDTIARDMDRDQFMSA 180
Query: 193 SEACDWGVVDKV 204
EA +G+VD V
Sbjct: 181 REAKTYGIVDLV 192
>gi|222149377|ref|YP_002550334.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium vitis
S4]
gi|221736361|gb|ACM37324.1| ATP-dependent Clp protease proteolytic subunit ClpP [Agrobacterium
vitis S4]
Length = 193
Score = 157 bits (397), Expect = 9e-37, Method: Composition-based stats.
Identities = 75/173 (43%), Positives = 112/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 22 LFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIHDMIKF 80
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 81 IKPKVWIIGTGWVASAGALIYVSVPKEQRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 140
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ +RL +I+ K G+T E++ K +DRD+ +SA EA +G+V K++ S+ +I
Sbjct: 141 IKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSAEEAKTYGLVSKIVESQSEI 193
>gi|306486010|gb|ADM92653.1| clp protease proteolytic subunit protein [Franklinia alatamaha]
Length = 197
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 121/194 (62%), Gaps = 5/194 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V ++ E D + +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVLINRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDD 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P
Sbjct: 61 TKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFP 120
Query: 132 NARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD M
Sbjct: 121 HARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFM 180
Query: 191 SASEACDWGVVDKV 204
SA+EA +G+VD V
Sbjct: 181 SATEAQAYGIVDLV 194
>gi|289065114|ref|YP_003434000.1| clp protease proteolytic subunit [Typha latifolia]
gi|281371797|gb|ADA63724.1| clp protease proteolytic subunit [Typha latifolia]
Length = 203
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 124/202 (61%), Gaps = 5/202 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
A+EA G+VD V + + E+
Sbjct: 180 ATEAQAHGIVDLVAVENENTED 201
>gi|330975104|gb|EGH75170.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 150
Score = 157 bits (397), Expect = 1e-36, Method: Composition-based stats.
Identities = 94/132 (71%), Positives = 113/132 (85%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
GLVPMV+EQ+ RGER+YDIYSRLLKER++F+ G +ED+MA LI AQLLFLEAENP K+I
Sbjct: 18 GLVPMVIEQSARGERAYDIYSRLLKERVIFMVGPVEDYMANLIAAQLLFLEAENPDKDIH 77
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINSPGG VTAGM+IYDTMQFIKP +ST C+GQA SMG+ LL+ G +G R LPN+R++
Sbjct: 78 LYINSPGGSVTAGMSIYDTMQFIKPDVSTICIGQACSMGAFLLAGGAEGKRHCLPNSRMM 137
Query: 137 LHQPSGGFSGQA 148
+HQP GGF GQA
Sbjct: 138 IHQPLGGFQGQA 149
>gi|7525058|ref|NP_051083.1| ATP-dependent Clp protease proteolytic subunit [Arabidopsis
thaliana]
gi|5360576|dbj|BAA82063.1| pClpP [Arabidopsis thaliana]
gi|5881719|dbj|BAA84410.1| ATP-dependent protease subunit [Arabidopsis thaliana]
Length = 196
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|88809169|ref|ZP_01124678.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787111|gb|EAR18269.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 223
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 76/192 (39%), Positives = 114/192 (59%), Gaps = 19/192 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE ++P K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDDPDKPIYFYINSTGTTWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ KR + EI N G++ EE+ K DR ++ +A D+G++
Sbjct: 147 SGARGQATDIQIRAKEVLHNKRAMLEILAANTGRSVEELSKDSDRMSYLTPDQAKDYGLI 206
Query: 202 DKVLMSRIDIEE 213
D+VL SR D+
Sbjct: 207 DRVLTSRKDLPS 218
>gi|114804289|ref|YP_762286.1| clp protease proteolytic subunit [Morus indica]
gi|122166780|sp|Q09WZ2|CLPP_MORIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78100341|gb|ABB20982.1| clp protease proteolytic subunit [Morus indica]
Length = 196
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + ++FL E+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+ IYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK+ + + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKSLWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|69214835|gb|AAZ03800.1| ATP-depedent Clp protease proteolytic subunit [Ginkgo biloba]
Length = 201
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 74/201 (36%), Positives = 124/201 (61%), Gaps = 6/201 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ Q++D +A + +++ E+
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQQVDDEIANQLIGIMMYPNGEDEN 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I YINSPGG V G+++YD MQF+ P + T CMG AASMGS + + GE R ALP+
Sbjct: 60 KDIYTYINSPGGTVIPGISLYDAMQFVVPDVHTICMGLAASMGSSVSTGGEITKRIALPH 119
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + +YV+ GK + + ++RD MS
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISEDMERDIFMS 179
Query: 192 ASEACDWGVVDKV-LMSRIDI 211
A+EA +G+VD V + + D+
Sbjct: 180 AAEAQAYGIVDLVAVDNTEDL 200
>gi|156085810|ref|XP_001610314.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis T2Bo]
gi|154797567|gb|EDO06746.1| ATP-dependent Clp protease proteolytic subunit, putative [Babesia
bovis]
Length = 245
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 72/191 (37%), Positives = 126/191 (65%), Gaps = 2/191 (1%)
Query: 19 VPMVVEQTNRGERS--YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP+V + +RS +DI++RL +ERI+FV+ +++ +I LL L++++ +K I+
Sbjct: 51 VPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSNEKPIT 110
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYINS GG TAG+ +YDT++ +K I+T +G ++ SLLL++G GMR ALP++R++
Sbjct: 111 LYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALPHSRVV 170
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP+G G A I AQ ++ +KR L ++Y + + + + K L+R+ MSA E+
Sbjct: 171 MHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMSAEESL 230
Query: 197 DWGVVDKVLMS 207
+G+VD+++ +
Sbjct: 231 QYGLVDRIIRT 241
>gi|544043|sp|P36387|CLPP_PINCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|457148|gb|AAA68094.1| ATP-dependent protease proteolytic subunit [Pinus contorta]
Length = 205
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 73/195 (37%), Positives = 118/195 (60%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I + +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KEI +IN PGG V G+ +Y MQ I P ++T CMG AASMGS +L GE R ALP+
Sbjct: 61 KEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + E Y++ G+ E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|148240099|ref|YP_001225486.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 7803]
gi|147848638|emb|CAK24189.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 223
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 78/191 (40%), Positives = 114/191 (59%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE +NP K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDTKRQVGIDVTELIIAQLLYLEFDNPDKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ AQ+++ KR + EI N G++ EE+ K DR ++ +A ++G++
Sbjct: 147 SGARGQATDIQIRAQEVLHNKRAMLEILSTNTGRSVEELSKDSDRMSYLTPEQAKEYGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 207 DRVLTSRKDLP 217
>gi|223931051|ref|YP_002586911.1| clp protease proteolytic subunit [Syntrichia ruralis]
gi|219562265|gb|ACL27596.1| clp protease proteolytic subunit [Syntrichia ruralis]
Length = 197
Score = 157 bits (396), Expect = 1e-36, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ ++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + +YV+ GK + + ++RD MS
Sbjct: 120 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDYITRVYVQRIGKPLWLISEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 180 AKEAKTYGIVDAV 192
>gi|257458199|ref|ZP_05623353.1| Clp protease [Treponema vincentii ATCC 35580]
gi|257444493|gb|EEV19582.1| Clp protease [Treponema vincentii ATCC 35580]
Length = 202
Score = 156 bits (395), Expect = 1e-36, Method: Composition-based stats.
Identities = 79/196 (40%), Positives = 125/196 (63%), Gaps = 6/196 (3%)
Query: 24 EQTNRGERSYD-----IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
E+T++ E++ D + + L R + ++G++ +A + QLL LEA++ K I +Y
Sbjct: 8 EETSK-EKTSDNANDQLMQKFLNTRQIILSGEVNKELAEKVIRQLLILEADSASKPIYVY 66
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I+SPGG V AG AI+D ++FIKPP+ T MG AS G+L+L A K R LPN+ L+H
Sbjct: 67 IDSPGGDVDAGFAIFDMIRFIKPPVYTVGMGLVASAGALILLAAPKNRRLGLPNSHYLIH 126
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QP G G A+DIE HA++I KI+ ++N + + GK +V K DRD+ +SA EA ++
Sbjct: 127 QPLSGIKGVATDIEIHAKEIEKIRAKINALIAEETGKDVADVAKDTDRDYWLSADEAVNY 186
Query: 199 GVVDKVLMSRIDIEEK 214
G++ +V+ +R D+ +K
Sbjct: 187 GLILQVIKTRSDLPKK 202
>gi|224126447|ref|XP_002329556.1| predicted protein [Populus trichocarpa]
gi|118483146|gb|ABK93479.1| unknown [Populus trichocarpa]
gi|222870265|gb|EEF07396.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 112/189 (59%), Gaps = 8/189 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 110 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGY 169
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M ++KPPI T C+G A +LLL+AG +G R ALP++ I++ QP G F
Sbjct: 170 ETEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLAAGSRGNRSALPSSTIMMKQPIGRFQ 229
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+E ++I +K L + K+ GK EE+E + R S +EA ++G++DKV+
Sbjct: 230 GQATDVELARKEIKNVKTELVNLLAKHIGKLPEEIEADISRPKYFSPTEAVEYGIIDKVI 289
Query: 206 MSRIDIEEK 214
+ E++
Sbjct: 290 YNERTTEDR 298
>gi|22299302|ref|NP_682549.1| ATP-dependent Clp protease-like protein [Thermosynechococcus
elongatus BP-1]
gi|22295485|dbj|BAC09311.1| ATP-dependent Clp protease proteolytic subunit 3
[Thermosynechococcus elongatus BP-1]
Length = 218
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 109/182 (59%), Gaps = 9/182 (4%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA---------GMA 91
KERIV++ + + LI A+LL+L+ ++P+K I +YINS G A
Sbjct: 31 KERIVYLGMPLVPAVTELIIAELLYLQYDDPEKPIRIYINSTGTSRYDGEPVGFETEAFA 90
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I DTM++IKPP+ T C+GQA M ++LLSAG KG R +LP+A I+LHQ GQA+DI
Sbjct: 91 ICDTMRYIKPPVHTICIGQAMGMAAMLLSAGTKGCRASLPHATIVLHQTKSYAQGQATDI 150
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ A++++ K + EI +N G+ E + + +DR M+ A ++G++D++L
Sbjct: 151 QIRAKEVLANKAMMVEILAQNTGQPPERITRDMDRLLYMTPQMAKEYGIIDRILEPEAVT 210
Query: 212 EE 213
++
Sbjct: 211 KK 212
>gi|209527271|ref|ZP_03275782.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|209492338|gb|EDZ92682.1| Endopeptidase Clp [Arthrospira maxima CS-328]
Length = 214
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/203 (35%), Positives = 120/203 (59%), Gaps = 15/203 (7%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP + + + +IY+RL +ERI+F+ + +A + + +L+L++++ K I +Y
Sbjct: 9 VPYQIPGSQY-WQWVNIYTRLSQERIIFLNQPLTTGVANSLVSAMLYLDSDDQNKPIYMY 67
Query: 79 INSPGG--------------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
INS G V A +A+YDTMQ IK I T C+GQA M +LLLS G K
Sbjct: 68 INSIGDPVLAGMANESMGMMSVMAALAVYDTMQHIKSEIVTICLGQAVGMAALLLSCGSK 127
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R +LPN+ I L+ P G GQA+DI+ A +I+ + + +I+ +N G+T E++ K +
Sbjct: 128 GKRASLPNSMITLYNPQTGTQGQATDIQVTADEILSKRALMMDIFHQNTGQTIEKLTKDM 187
Query: 185 DRDHIMSASEACDWGVVDKVLMS 207
+R M+ EA ++G++D+VL +
Sbjct: 188 NRTFYMTPEEAKEYGIIDRVLTT 210
>gi|183221092|ref|YP_001839088.1| ATP-dependent Clp protease proteolytic subunit [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|189911184|ref|YP_001962739.1| ATP-dependent Clp protease [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775860|gb|ABZ94161.1| Protease subunit of an ATP-dependent Clp protease [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167779514|gb|ABZ97812.1| ATP-dependent Clp protease proteolytic subunit (ATP-dependent Clp
protease proteolytic subunit) [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
Length = 202
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 83/186 (44%), Positives = 123/186 (66%), Gaps = 8/186 (4%)
Query: 30 ERSYDIYS------RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E D+ S + L++R +F+ G + D + + A+L++LE +P K I+ YINSPG
Sbjct: 13 ETIQDLISDKNMGKKFLEKRKIFLWGPVTDESSKELTAKLMYLEMVDPGKPITFYINSPG 72
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG- 142
GVVT+G+ +YDTMQ I P+ T CMG AASMGS+LL G+KG R+ PN R+++HQPS
Sbjct: 73 GVVTSGLVVYDTMQMISSPVHTVCMGMAASMGSILLIGGKKGNRYIWPNGRVMIHQPSIG 132
Query: 143 -GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
A+D+ HAQDIVK K +LN++ CGK+YE++ + DRD+ M A +A +G+V
Sbjct: 133 GQIQAPATDLLIHAQDIVKTKEKLNQMLADACGKSYEQLVEDTDRDYYMDAEQALAYGIV 192
Query: 202 DKVLMS 207
DK++ +
Sbjct: 193 DKIVNT 198
>gi|139388119|ref|YP_001123311.1| ATP-dependent protease subunit [Barbarea verna]
gi|139389443|ref|YP_001123140.1| ATP-dependent Clp protease proteolytic subunit [Olimarabidopsis
pumila]
gi|139389826|ref|YP_001123487.1| ATP-dependent Clp protease proteolytic subunit [Crucihimalaya
wallichii]
gi|160380544|sp|A4QKD0|CLPP_BARVE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380548|sp|A4QKV6|CLPP_CRUWA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380560|sp|A4QJV6|CLPP_OLIPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286337|dbj|BAF49964.1| ATP-dependent protease subunit [Olimarabidopsis pumila]
gi|134286510|dbj|BAF50135.1| ATP-dependent protease subunit [Barbarea verna]
gi|134286688|dbj|BAF50311.1| ATP-dependent protease subunit [Crucihimalaya wallichii]
Length = 196
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|228016690|gb|ACP51518.1| ATP-dependent Clp protease proteolytic subunit [Pinus aristata]
Length = 196
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I ++N PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFLNCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A++ + I ++ + + Y++ E +++ LDRD MS
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEVKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEARAYGIVDTVAE 195
>gi|302835159|ref|XP_002949141.1| hypothetical protein VOLCADRAFT_120717 [Volvox carteri f.
nagariensis]
gi|300265443|gb|EFJ49634.1| hypothetical protein VOLCADRAFT_120717 [Volvox carteri f.
nagariensis]
Length = 288
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 112/195 (57%), Gaps = 4/195 (2%)
Query: 18 LVPMVVEQTNRGERS--YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ P + Q +GE + D+Y LL RI+FV G I D MAT I LL LEA + ++I
Sbjct: 65 VTPDI--QIGQGEDAIQMDLYRYLLTNRIIFVGGYINDKMATQIVGSLLALEAIDENEDI 122
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
LYINSPGG + + + D +Q IKP + T +G S SLLL++G KG R+A+ N RI
Sbjct: 123 RLYINSPGGQPYSVLGVVDAIQSIKPDVQTVALGACYSYSSLLLASGTKGKRYAMKNTRI 182
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++ QP GG G I++ +++ I + + Y++ G + + VE+ RD+ M+ +A
Sbjct: 183 MMTQPMGGSQGDIYQIKKTVEELNAIYQIFSRYYMRFTGMSQDAVEQATCRDYFMTPEQA 242
Query: 196 CDWGVVDKVLMSRID 210
G++D ++ + D
Sbjct: 243 KMEGLIDDIIRGKGD 257
>gi|139389121|ref|YP_001123839.1| ATP-dependent Clp protease proteolytic subunit [Nasturtium
officinale]
gi|160380558|sp|A4QLV8|CLPP_NASOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134287044|dbj|BAF50663.1| ATP-dependent protease subunit [Nasturtium officinale]
Length = 196
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 120/194 (61%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER---SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V ++ GE DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSP-GEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKD 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V +GMA+YDTMQF++P + T CMG AAS+ S +L G R A P
Sbjct: 60 TKDLYLFINSPGGWVISGMAVYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFP 119
Query: 132 NARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD M
Sbjct: 120 HARVMIHQPASSFYEAQTGEFILEAEELLKVRETITRVYVQRTGKPIWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|217075244|gb|ACJ85982.1| unknown [Medicago truncatula]
Length = 195
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q + D+Y+RL +ER++F+ ++ ++ + +++L +E+
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSSEDKT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V +GMAI+D MQ ++ + T C+G AASMGSLLL GE R A P+
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 133 ARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + GQ + A++++K+++ + IY + GK ++ + ++RD MS
Sbjct: 121 ARVMIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 AEEAEAYGIVDTV 193
>gi|88800672|ref|ZP_01116232.1| ATP-dependent Clp protease proteolytic subunit [Reinekea sp.
MED297]
gi|88776633|gb|EAR07848.1| ATP-dependent Clp protease proteolytic subunit [Reinekea sp.
MED297]
Length = 185
Score = 156 bits (395), Expect = 2e-36, Method: Composition-based stats.
Identities = 78/185 (42%), Positives = 111/185 (60%), Gaps = 2/185 (1%)
Query: 28 RGERSYDIYS-RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
+ E+S D S RL R V + +I MA + AQLL L AE +I L+INS GG V
Sbjct: 2 KDEKSQDPVSERLFSGRKVLICEEINQEMAKKVTAQLLAL-AEESDDDIVLFINSQGGHV 60
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
AG I+D +QFI P + G AS G+ + A +KG R+ LPN R L+HQPSGG G
Sbjct: 61 EAGDTIHDIIQFIAPRVKVVGTGYVASAGTHIFLAADKGDRYCLPNTRFLIHQPSGGVGG 120
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QASDI A+ I++++ RL I + G+ + V K ++RD+ M+ EA ++G+VDKV+
Sbjct: 121 QASDIAIQAEQIIRMRERLARIISEQTGQPIDRVRKDIERDNWMTTDEAIEYGIVDKVVR 180
Query: 207 SRIDI 211
S ++
Sbjct: 181 SSSEV 185
>gi|139387277|ref|YP_001123398.1| ATP-dependent Clp protease proteolytic subunit [Capsella
bursa-pastoris]
gi|139390177|ref|YP_001123750.1| ATP-dependent Clp protease proteolytic subunit [Lobularia maritima]
gi|160380546|sp|A4QKL7|CLPP_CAPBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380557|sp|A4QLL9|CLPP_LOBMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286598|dbj|BAF50222.1| ATP-dependent protease subunit [Capsella bursa-pastoris]
gi|134286954|dbj|BAF50574.1| ATP-dependent protease subunit [Lobularia maritima]
Length = 196
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|84998026|ref|XP_953734.1| ATP-dependent Clp-like protease [Theileria annulata]
gi|65304731|emb|CAI73056.1| ATP-dependent Clp-like protease, putative [Theileria annulata]
Length = 215
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 116/201 (57%), Gaps = 12/201 (5%)
Query: 19 VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+P V + DI++RL +ERI+FV+ ++D + A +L L+ E +K I+
Sbjct: 7 IPKVSYKHPGSNQVEWEDIHNRLFRERILFVSQPLDDEYVNQLIAAILCLDNETSEKPIT 66
Query: 77 LYINSPGGVVTAGMAIYD----------TMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
LYINSPGG + AG+++YD Q ++ I T +G AS +LLL +G G
Sbjct: 67 LYINSPGGNMHAGLSLYDTLEVKTNKDKFNQHVRSEIVTINVGLCASTATLLLGSGTPGK 126
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ L ++R+LL QPSG G A I+ AQ I++IK+ L EIY + YE++ ++R
Sbjct: 127 RYGLQHSRVLLLQPSGLAEGTAEQIKIEAQHILEIKKNLIEIYSNITKQPYEKIASDIER 186
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D+ MS+ E +G++D+++ +
Sbjct: 187 DNFMSSEEYKSYGLIDEIITN 207
>gi|56751581|ref|YP_172282.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 6301]
gi|81301347|ref|YP_401555.1| ATP-dependent Clp protease-like protein [Synechococcus elongatus
PCC 7942]
gi|18203214|sp|Q9L4P4|CLPR_SYNE7 RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|7264063|emb|CAB81780.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686540|dbj|BAD79762.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170228|gb|ABB58568.1| Endopeptidase Clp [Synechococcus elongatus PCC 7942]
Length = 228
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERI+++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 31 KERIIYLGMPLFSSDDVKRQVGFDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 90
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DTM++IKPP+ T C+GQA +++LS G G R +LP+A I+L+QP
Sbjct: 91 AIGYETEAFAICDTMRYIKPPVHTICIGQAMGTAAMILSGGTPGNRASLPHATIVLNQPR 150
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ A++++ KR + EI+ +N G+ + + + DR M+ ++A ++G++
Sbjct: 151 TGAQGQASDIQIRAKEVLANKRTMLEIFARNTGQDPDRLARDTDRMLYMTPAQAVEYGLI 210
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 211 DRVLDSRKDLP 221
>gi|194476563|ref|YP_002048742.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191570|gb|ACB42532.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 191
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 79/184 (42%), Positives = 125/184 (67%), Gaps = 1/184 (0%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
+E R+ D S + ERI+F+TG++ED+MA + A LL+ A++ + I LYINS
Sbjct: 8 LEFPPGSGRAADPISAMSMERILFITGEVEDYMANQMVANLLYFNAQSVKDPIHLYINSD 67
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG +++G+AIYDT+ +IK P++T C+G A+SM + LL+AG +G R AL ++RI++HQP G
Sbjct: 68 GGSISSGLAIYDTINYIKAPVTTTCLGSASSMAAFLLAAGSRGERRALKHSRIMIHQPIG 127
Query: 143 GF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G QASD+ A ++ KR++NE + G+T +++EK DRD+ +SA EA +G++
Sbjct: 128 GIGRRQASDLLIEASEMAFTKRKMNECMAEMTGQTIDKIEKDTDRDYHLSAFEALRYGII 187
Query: 202 DKVL 205
D V+
Sbjct: 188 DSVV 191
>gi|156094115|ref|XP_001613095.1| ATP-dependent CLP protease [Plasmodium vivax SaI-1]
gi|148801969|gb|EDL43368.1| ATP-dependent CLP protease, putative [Plasmodium vivax]
Length = 375
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 106/169 (62%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I A + +QLL+L++ N +I +YINSPGG + G+AI D +I
Sbjct: 193 FKKRIIYLTEEINKKTADELISQLLYLDSLNHD-DIKIYINSPGGSINEGLAILDIFNYI 251
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ I T G ASM S++L++G+KG R +LPN RI++HQP G G DIE ++I+
Sbjct: 252 QSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEIL 311
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L +T E +EK DRDH M+A EA +G++D+V+ ++
Sbjct: 312 YLKKLLYNYLSSFTNQTIETIEKDSDRDHYMNALEAKRYGIIDEVIQTK 360
>gi|196018963|ref|XP_002118901.1| hypothetical protein TRIADDRAFT_34921 [Trichoplax adhaerens]
gi|190577803|gb|EDV18612.1| hypothetical protein TRIADDRAFT_34921 [Trichoplax adhaerens]
Length = 139
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 95/139 (68%), Positives = 124/139 (89%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ +P+V+EQT + ER++DI+SRLLKERI+F++GQ+ED+MA++I AQLLFLE+ENP+K+I
Sbjct: 1 MSYIPVVIEQTPKSERAFDIFSRLLKERIIFLSGQVEDNMASVIIAQLLFLESENPEKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVV+AG+AIYDTMQ+IK +ST C+GQA SMGS LL+AGEKG RFALPN+RI
Sbjct: 61 FMYINSPGGVVSAGLAIYDTMQYIKSDVSTLCVGQACSMGSFLLTAGEKGKRFALPNSRI 120
Query: 136 LLHQPSGGFSGQASDIERH 154
++HQP GGF GQA+DIE H
Sbjct: 121 MIHQPIGGFRGQATDIEIH 139
>gi|75907529|ref|YP_321825.1| ATP-dependent Clp protease-like protein [Anabaena variabilis ATCC
29413]
gi|75701254|gb|ABA20930.1| Peptidase S14, ClpP [Anabaena variabilis ATCC 29413]
Length = 220
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 73/178 (41%), Positives = 110/178 (61%), Gaps = 9/178 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV---------VTAGMA 91
KERIV++ + + LI AQLL+L++++P K I +YINS G T A
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFA 91
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTM++IKPPI T C+G A M ++LLSAG KG R +LPNA I+LHQP GQA+DI
Sbjct: 92 IYDTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIILHQPKSYAQGQATDI 151
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ A++++ K + +I+ + G+ E++ K +DR M+ +A D+G++D+V
Sbjct: 152 QIRAREVLVNKGSMVDIFARTTGQAPEKITKDMDRLLYMTPYQAKDYGLIDRVFEKEE 209
>gi|255642366|gb|ACU21447.1| unknown [Glycine max]
Length = 175
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 92/144 (63%), Positives = 119/144 (82%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
L+PMV+E ++RGER+YDI+SRLLKERI+ + G I D A ++ AQ LFLE+ENP K I+
Sbjct: 26 SLIPMVIEHSSRGERAYDIFSRLLKERIICINGPISDDTAHVVVAQPLFLESENPSKPIN 85
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+NSPGG ++AG+AIYDTMQ+I+ P+ST CMGQAASMGSLLL+AG KG R +LPNA I+
Sbjct: 86 MYLNSPGGAISAGLAIYDTMQYIRSPVSTICMGQAASMGSLLLAAGAKGERRSLPNATIM 145
Query: 137 LHQPSGGFSGQASDIERHAQDIVK 160
+HQPSGG+SGQA DI H + IV+
Sbjct: 146 IHQPSGGYSGQAKDIAIHTKHIVR 169
>gi|69214843|gb|AAZ03804.1| ATP-depedent Clp protease proteolytic subunit [Yucca schidigera]
Length = 195
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G + + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|290489450|gb|ADD31109.1| clp protease proteolytic subunit protein [Phoradendron serotinum]
Length = 196
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 76/193 (39%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E DIY+RL +ER++F+ ++ ++ + + +++L EN
Sbjct: 1 MPIGVPRVPFRIPGEEYSTWVDIYNRLYRERLLFLGQGVDSEISNQLISLMVYLSIENET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ +INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G R A P+
Sbjct: 61 KDFYFFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGSITKRLAFPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S F Q + A++++K++ L ++YV+ GKT V + ++RD MS
Sbjct: 121 ARVMIHQPASSYFEAQTVEFILEAEELLKLRETLTQVYVQRTGKTLWIVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|7524625|ref|NP_042379.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
gi|1168979|sp|P41609|CLPP_PINTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1262619|dbj|BAA04336.1| ATP-dependent protease subunit [Pinus thunbergii]
Length = 196
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP S + G A+D ++ + ++ + Y++ + E +++ L+RD MS
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|69214841|gb|AAZ03803.1| ATP-depedent Clp protease proteolytic subunit [Typha latifolia]
Length = 195
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|86141806|ref|ZP_01060330.1| Protease subunit of ATP-dependent Clp protease [Leeuwenhoekiella
blandensis MED217]
gi|85831369|gb|EAQ49825.1| Protease subunit of ATP-dependent Clp protease [Leeuwenhoekiella
blandensis MED217]
Length = 181
Score = 156 bits (394), Expect = 2e-36, Method: Composition-based stats.
Identities = 88/168 (52%), Positives = 121/168 (72%), Gaps = 1/168 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ER VF+ GQ++D A + +LL+L+A + EI YINSPGG VT+G +IYDT++
Sbjct: 15 KLLEERKVFLWGQVDDKSAKHVVDRLLYLDALSND-EIQFYINSPGGYVTSGFSIYDTIK 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
IK P+ST C G AASMGS+LLS GEKG RF P+AR+++HQPSGG GQASDIE AQ+
Sbjct: 74 SIKSPVSTICTGLAASMGSILLSVGEKGRRFIQPHARVMIHQPSGGARGQASDIEITAQE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
I+K K +I NCG+ +++V K +RDH M A E+ +G+VD ++
Sbjct: 134 ILKTKELSAKILADNCGQDFDKVMKDFNRDHWMGAEESVAYGIVDGIV 181
>gi|139389289|ref|YP_001123055.1| ATP-dependent protease subunit [Aethionema grandiflorum]
gi|139390373|ref|YP_001122971.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|160380540|sp|A4QJE0|CLPP_AETCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380541|sp|A4QJM4|CLPP_AETGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286166|dbj|BAF49795.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|134286251|dbj|BAF49879.1| ATP-dependent protease subunit [Aethionema grandiflorum]
Length = 196
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|169142814|ref|YP_001687238.1| ATP-dependent Clp protease proteolytic subunit [Aneura mirabilis]
gi|153973840|gb|ABS54500.1| clp protease proteolytic subunit [Aneura mirabilis]
Length = 203
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ Q++D +A + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS +L+ GE R ALP+
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD S
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWIISEDMERDVFSS 179
Query: 192 ASEACDWGVVDKV 204
A EA G+VD V
Sbjct: 180 AEEAKIHGIVDSV 192
>gi|228016377|gb|ACP51210.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
Length = 196
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + Y++ + E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|331695495|ref|YP_004331734.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
gi|326950184|gb|AEA23881.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia
dioxanivorans CB1190]
Length = 236
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 81/171 (47%), Positives = 111/171 (64%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERIVF+ +++D +A I QLL L A +P +I+ YINSPGG VTAGMAIYD
Sbjct: 63 VFDRLLEERIVFLGKEVDDEIANRITGQLLLLAAADPAADITFYINSPGGSVTAGMAIYD 122
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I P ++T+ +G AASMG LL+AG G R AL + RIL+HQPS G +DI
Sbjct: 123 TMQVIAPDVATYAVGFAASMGQFLLTAGAPGKRHALAHTRILMHQPSASLGGTHTDIAIR 182
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A +KR + + ++ G+ E + DRDH +A EA D+G+VD V+
Sbjct: 183 AGASAGMKREIARLTARHSGRDVETIIADADRDHWFTAEEARDYGLVDTVI 233
>gi|116328441|ref|YP_798161.1| protease subunit of an ATP-dependent Clp protease [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116331169|ref|YP_800887.1| protease subunit of an ATP-dependent Clp protease [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
gi|116121185|gb|ABJ79228.1| Protease subunit of an ATP-dependent Clp protease [Leptospira
borgpetersenii serovar Hardjo-bovis L550]
gi|116124858|gb|ABJ76129.1| Protease subunit of an ATP-dependent Clp protease [Leptospira
borgpetersenii serovar Hardjo-bovis JB197]
Length = 197
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 75/175 (42%), Positives = 115/175 (65%), Gaps = 2/175 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I + L R +F+ G + D + + +LL+LE ++P K I+ YINSPGGVVT+GM ++D
Sbjct: 19 ISKKFLDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGKPITFYINSPGGVVTSGMTVFD 78
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIE 152
T++ I P+ T CMG AASMGS+LL+AG KG R PN ++++HQPS A+D++
Sbjct: 79 TIKMISSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNGKVMIHQPSIGGQIVAPATDLK 138
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
HA++I+K K +LN+I CG+ ++E+ DRD+ M A EA +G+V+K+
Sbjct: 139 IHAEEILKTKAKLNQILADACGQPVSKIEEDTDRDYYMDAEEAIQYGIVNKLATK 193
>gi|69214833|gb|AAZ03799.1| ATP-depedent Clp protease proteolytic subunit [Acorus americanus]
Length = 195
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 118/193 (61%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DI +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDI-NRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+INSPGG V G+ +YDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD +S
Sbjct: 120 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|229577779|ref|YP_002836115.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
gi|226933907|gb|ACO92040.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
Length = 201
Score = 155 bits (393), Expect = 3e-36, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVY-RLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDEI 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|219820815|gb|ACL37528.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820817|gb|ACL37529.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820819|gb|ACL37530.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820821|gb|ACL37531.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820823|gb|ACL37532.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820825|gb|ACL37533.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820827|gb|ACL37534.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820829|gb|ACL37535.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820831|gb|ACL37536.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820833|gb|ACL37537.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820835|gb|ACL37538.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820837|gb|ACL37539.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820839|gb|ACL37540.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820841|gb|ACL37541.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820843|gb|ACL37542.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820845|gb|ACL37543.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820847|gb|ACL37544.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820849|gb|ACL37545.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820851|gb|ACL37546.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
gi|219820853|gb|ACL37547.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes]
Length = 151
Score = 155 bits (392), Expect = 3e-36, Method: Composition-based stats.
Identities = 89/150 (59%), Positives = 116/150 (77%)
Query: 29 GERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
GER+YDIYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I LYINSPGG ++A
Sbjct: 1 GERAYDIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISA 60
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
GMAIYDTM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA
Sbjct: 61 GMAIYDTMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQA 120
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
++IE A+ I+KIK R+N I + G+ YE
Sbjct: 121 TEIEIAARHILKIKERMNTIMAEKTGQPYE 150
>gi|309322359|ref|YP_003934209.1| ATP-dependent Clp protease proteolytic subunit [Cedrus deodara]
gi|307683285|dbj|BAJ19593.1| ATP-dependent Clp protease proteolytic subunit [Cedrus deodara]
Length = 196
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ ++N PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP S + G A+D + ++ + ++ + + Y++ G E +++ L+RD MS
Sbjct: 121 ARIMIHQPASSYYDGPAADFHKESKHVTMLRDYITKCYIERTGNPGEIIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDAVAE 195
>gi|126657142|ref|ZP_01728313.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
gi|126621685|gb|EAZ92395.1| ATP-dependent protease; ClpP [Cyanothece sp. CCY0110]
Length = 147
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 84/141 (59%), Positives = 110/141 (78%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P V+E + RGER++DIYSRLL+ERIVF+ ++ D + LI AQLLFLEAE+P K+I L
Sbjct: 1 MIPTVIETSGRGERAFDIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V+AG+ I+DTM I+P + T C+G AASMG+ LLSAG KG R +LPN+RI++
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 138 HQPSGGFSGQASDIERHAQDI 158
HQP GG GQA+DIE A+
Sbjct: 121 HQPLGGAQGQATDIEIQAKKF 141
>gi|222084109|ref|YP_002519561.1| ATP-dependent Clp protease proteolytic subunit [Keteleeria
davidiana]
gi|220983661|dbj|BAH11427.1| ATP-dependent Clp protease proteolytic subunit [Keteleeria
davidiana]
Length = 196
Score = 155 bits (392), Expect = 4e-36, Method: Composition-based stats.
Identities = 69/195 (35%), Positives = 117/195 (60%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ ++N PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 QDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D + +Q + ++ + + Y++ G + E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGPAADFHKESQHVTMLRDYITKCYIERTGNSGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDAVAE 195
>gi|295840242|ref|ZP_06827175.1| Clp protease [Streptomyces sp. SPB74]
gi|295827856|gb|EFG65658.1| Clp protease [Streptomyces sp. SPB74]
Length = 217
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/187 (37%), Positives = 118/187 (63%), Gaps = 2/187 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T+ G R+ D YSRLL+ RIVF+ ++D A + AQ L LE P ++ISL
Sbjct: 29 VLPEFTERTSYGTRALDPYSRLLEGRIVFLGTPLDDTAAADLAAQFLHLEYAAPDQDISL 88
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N PGG TA A++ T++ + ++T+C+GQA ++G++LL+AG G R ALP ARI+L
Sbjct: 89 YLNCPGGDFTALTAVHYTLRHLSCDVATYCLGQAVAVGAVLLAAGTPGKRAALPGARIVL 148
Query: 138 HQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
QP G+ SD+ A ++ + +R + G+T +EV ++R+ +++A+EA
Sbjct: 149 RQPELAEVTRGRPSDLAVLAGEMARERRTTERLLAAATGRTEDEVHGDMERERVLTAAEA 208
Query: 196 CDWGVVD 202
+G++D
Sbjct: 209 VAYGIID 215
>gi|139388935|ref|YP_001123662.1| ATP-dependent Clp protease proteolytic subunit [Lepidium
virginicum]
gi|160380556|sp|A4QLD1|CLPP_LEPVR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286865|dbj|BAF50486.1| ATP-dependent protease subunit [Lepidium virginicum]
Length = 196
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ ++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|228015993|gb|ACP50832.1| ATP-dependent Clp protease proteolytic subunit [Pinus resinosa]
Length = 196
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 70/195 (35%), Positives = 115/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I +IN PGG V G+ ++D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S + G A+D ++ + ++ + Y++ + E +++ L+RD MS
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTEQPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDVVAE 195
>gi|186681466|ref|YP_001864662.1| ATP-dependent Clp protease-like protein [Nostoc punctiforme PCC
73102]
gi|186463918|gb|ACC79719.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 220
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 9/178 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV---------VTAGMA 91
KERIV++ + + LI A+LLFL++++P+K I +YINS G T A
Sbjct: 32 KERIVYIGMPLVPAVTELIVAELLFLQSDDPEKPIKIYINSTGTSGYSGEPIGFETEAFA 91
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTM++IKPPI T C+G A M ++LLSAG KG R +LP++ I+LHQP GQA+DI
Sbjct: 92 IYDTMRYIKPPIHTICVGSAMGMSAMLLSAGTKGCRASLPHSSIILHQPKSYAQGQATDI 151
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ A++++ K L +I + G+ E++ K +DR ++ EA ++G++D+V
Sbjct: 152 QIRAREVLVNKGALVDILHQTTGQPREKITKDMDRLLYLTPYEAKEYGLIDRVFEKEE 209
>gi|149390564|ref|YP_001294209.1| clp protease proteolytic subunit [Buxus microphylla]
gi|160380545|sp|A6MM61|CLPP_BUXMI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146762309|gb|ABQ45273.1| clp protease proteolytic subunit [Buxus microphylla]
Length = 202
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 75/201 (37%), Positives = 121/201 (60%), Gaps = 5/201 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF+ P I T CMG AASMGS LL GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ G V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV-LMSRIDI 211
A EA G+VD V + + D+
Sbjct: 181 AIEAQAHGIVDLVAVENSGDL 201
>gi|228017379|gb|ACP52196.1| ATP-dependent Clp protease proteolytic subunit [Larix occidentalis]
Length = 196
Score = 155 bits (391), Expect = 4e-36, Method: Composition-based stats.
Identities = 68/195 (34%), Positives = 114/195 (58%), Gaps = 4/195 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ ++N PGG V G+ I+D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + A+D ++ + ++ + + Y++ G E +++ L+RD MS
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPGEVIQRDLNRDVFMS 180
Query: 192 ASEACDWGVVDKVLM 206
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDAVAE 195
>gi|167999544|ref|XP_001752477.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696377|gb|EDQ82716.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 232
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 81/174 (46%), Positives = 120/174 (68%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ +LK+RIVF+ Q++D +A I +QLL L+A +P+++I L+IN PGG ++A M I+
Sbjct: 16 DVMGLMLKQRIVFLGNQMDDFVADSIISQLLLLDAIDPKQDIRLFINCPGGSISAAMGIF 75
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D MQ K IST C G AAS +LLL+AG KG R A+PN+RI++HQP GG SGQA D+E
Sbjct: 76 DAMQLCKCDISTICFGFAASTAALLLAAGTKGKRLAMPNSRIMMHQPMGGASGQAIDVEI 135
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A++++ K + I + G++ E+VEK +DRD MS EA ++G++D V+
Sbjct: 136 QAKEVMYHKSNVIRILSEITGRSIEQVEKDIDRDRYMSPIEAMEYGMIDGVIDK 189
>gi|320537176|ref|ZP_08037146.1| Clp protease [Treponema phagedenis F0421]
gi|320145982|gb|EFW37628.1| Clp protease [Treponema phagedenis F0421]
Length = 197
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 121/191 (63%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E+ + G S + + L+ R + ++G++ +A + QLL LEAE+ K I +YI+SPG
Sbjct: 7 EEQDNGIGSNVLIGKFLETRQILLSGEVNKELAEKVIRQLLILEAESATKPIYVYIDSPG 66
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G V AG AI+D ++F+KPP+ MG AS G+L+L AG K R LPN+ L+HQP G
Sbjct: 67 GDVDAGYAIFDMIRFVKPPVYMIGMGLVASAGALILLAGAKDYRLGLPNSHYLIHQPLSG 126
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A+DIE HA+++ K ++++NE+ G ++VEK DRD+ + A +A +G++ K
Sbjct: 127 MKGVATDIEIHAKELEKTRQKINELIAAQTGTEIKKVEKDTDRDYWLDAPDALSYGLISK 186
Query: 204 VLMSRIDIEEK 214
++ SR ++ +K
Sbjct: 187 IIASRNELPKK 197
>gi|254499146|ref|ZP_05111834.1| truncated ATP-dependent Clp protease proteolytic subunit
[Legionella drancourtii LLAP12]
gi|254351635|gb|EET10482.1| truncated ATP-dependent Clp protease proteolytic subunit
[Legionella drancourtii LLAP12]
Length = 169
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 95/168 (56%), Positives = 132/168 (78%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G++EDHMA L+ AQLLFLE+ENP+K+ISLYINSPGGVVTAG+AIYDTMQFIKP +ST C+
Sbjct: 2 GEVEDHMANLVVAQLLFLESENPEKDISLYINSPGGVVTAGLAIYDTMQFIKPDVSTLCI 61
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
GQAAS +LLL AG G RF LPN+R+++HQP GG+ GQA+DIE HA++ + ++ RLN I
Sbjct: 62 GQAASAAALLLCAGADGKRFCLPNSRVMIHQPLGGYRGQATDIEIHARETLAVRERLNSI 121
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K+ KT +++ + +RD+ MSA++A ++G++DKV+ R + +
Sbjct: 122 MAKHTKKTPDQIMRDTERDNFMSATQAAEYGLIDKVIYDREVVSNPEE 169
>gi|291569212|dbj|BAI91484.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 230
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 108/194 (55%), Gaps = 20/194 (10%)
Query: 41 KERIVFVTGQIED----------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERI+++ + + LI AQLL+L+ +P+K I YINS G
Sbjct: 32 KERIIYLGSPLVSSDEYKRQLGVDVTKLIIAQLLYLQFSDPEKPIFFYINSTGTSWYTGD 91
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ ++KPP+ T C+GQA +++LSAG KG R +LP+A I+L+QP
Sbjct: 92 AIGQDTEAFAICDTINYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQPR 151
Query: 142 GGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
G QA+DI+ A++++ K + I KN G+ E++ K DR ++ A ++G+
Sbjct: 152 MGMGRSQATDIQIRAKEVLANKASILGILSKNTGQPVEKIAKDTDRMFYLTPEAAKEYGL 211
Query: 201 VDKVLMSRIDIEEK 214
+D+VL S ++ ++
Sbjct: 212 IDRVLESTKELPKQ 225
>gi|313183847|ref|YP_004021690.1| clp protease proteolytic subunit [Prunus persica]
gi|309321459|gb|ADO65000.1| clp protease proteolytic subunit [Prunus persica]
Length = 195
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 74/195 (37%), Positives = 118/195 (60%), Gaps = 5/195 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E + D+Y RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDVY-RLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P I T CMG AASMGS +L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +Y + GK V + ++RD MS
Sbjct: 120 ARVMIHQPAASFYEAQTGEFILEAEELLKLRETLTRVYAQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKVLM 206
A EA G+VD V
Sbjct: 180 AIEAQAHGIVDLVAT 194
>gi|209964755|ref|YP_002297670.1| ClpP protease, putative [Rhodospirillum centenum SW]
gi|209958221|gb|ACI98857.1| ClpP protease, putative [Rhodospirillum centenum SW]
Length = 211
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 107/178 (60%), Gaps = 1/178 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I L K R V + G+I +A AQLL + + I++ INSPGG V +G +I+D
Sbjct: 35 IQQALFKSRTVLIFGEINQKVAQDTVAQLLAYASISDD-PINIVINSPGGHVESGDSIHD 93
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
T++FIKP + G AS G+ + + R+ LPN R L+HQP GG G+ASDI
Sbjct: 94 TIRFIKPRVKILGTGWVASAGAHIFLGAHRENRYCLPNTRFLIHQPMGGAGGRASDIAIE 153
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
AQ+I+K++RR+N I + G+ E VE+ DR++ MSA EA ++G+V ++ ++ + +
Sbjct: 154 AQEIIKMRRRINSIIARETGQPLERVEQDTDRNYWMSAEEAKEYGLVTHIVATQAEFD 211
>gi|182416350|ref|YP_001821416.1| endopeptidase Clp [Opitutus terrae PB90-1]
gi|177843564|gb|ACB77816.1| Endopeptidase Clp [Opitutus terrae PB90-1]
Length = 216
Score = 155 bits (391), Expect = 5e-36, Method: Composition-based stats.
Identities = 73/176 (41%), Positives = 110/176 (62%), Gaps = 2/176 (1%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
I + L++R +F+ G + D A + +LL+LEA +P KEI+ YINSPGG +TAGMA++
Sbjct: 40 MIQKKFLRQRKIFLWGAVTDETAKDMTEKLLYLEAVDPGKEITFYINSPGGSITAGMAVF 99
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDI 151
DTM+ I PI+ G AASMGS+LL KG R P+AR+L+HQP G A+DI
Sbjct: 100 DTMRLITSPITVIVTGMAASMGSILLCGAPKGRRLLYPHARVLIHQPLISGRMVGPATDI 159
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+++ KI+ LN+I + G+ E + + DRD ++A EA +G+ D+++
Sbjct: 160 NIQAKEMEKIRAELNQILADSSGQPIERINQDTDRDFYLNAKEAIAYGLADRIVDK 215
>gi|254425265|ref|ZP_05038983.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196192754|gb|EDX87718.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 218
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 65/195 (33%), Positives = 115/195 (58%), Gaps = 14/195 (7%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV 86
+R + +I++R+ +ERI+F+ + D +A + + LL+L++E+ K I LYINS G V
Sbjct: 10 SRSWQWVNIFTRMSQERILFLNSPLTDGVANSLVSALLYLDSEDQSKPIYLYINSLGDPV 69
Query: 87 TAGMA--------------IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+G A +YDT+ IK + T CMG A M ++LL+AG KG R ALP+
Sbjct: 70 MSGQADESAGMISIRAGLAVYDTIAHIKSEVLTICMGTAYGMAAVLLAAGAKGKRAALPH 129
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
I L P+ GQA+DI A +++ ++ + +I + G++ E++ K ++R +S
Sbjct: 130 TSIALTHPTTLTRGQATDINLEATEVLAKRKLIQQILANSTGQSAEKIAKDMERMFYLSP 189
Query: 193 SEACDWGVVDKVLMS 207
+EA ++G++D+V+ +
Sbjct: 190 TEAKEYGLIDRVIEN 204
>gi|189162296|ref|YP_001936542.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
gi|166065382|gb|ABY79757.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
Length = 210
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 68/205 (33%), Positives = 121/205 (59%), Gaps = 4/205 (1%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL + R++F+T +I ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRLPGDEDATWVDVYNRLYRSRLLFLTQEITTEISNYLIGLMVYLSIEDQT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+IN PGG V G+AI+D MQ + P I T CMG AASMGS +L GE RFA P+
Sbjct: 61 QDFYLFINCPGGWVLPGIAIFDAMQLVLPDIYTICMGIAASMGSFILVGGEITKRFAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F ++ + A++++ ++ L ++Y + G+ + + + L+RD MS
Sbjct: 121 ARVMIHQPASSFHEGSTGECMMEAEELLTLRETLTKVYAQRTGQPFGVLTEDLERDVFMS 180
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A EA G++D + ++I + K
Sbjct: 181 AREAQAHGIIDLIAKEGVEIIKTEK 205
>gi|156598329|gb|ABU85425.1| clp protease proteolytic subunit [Musa acuminata]
Length = 195
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ ++ ++ I +++L E+
Sbjct: 1 MPVGVPKVPFRSPGEEDAVWVDL-NRLHRERLLFLGQEVNSEISNQIVGLMVYLSIEDNT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V +G+AIYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLFLFINSPGGWVVSGIAIYDTMQFVPPDVHTICMGLAASMGSFILIGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F + + ++++K++ L ++YV+ GK V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYESRTGEFVLEMEELLKLRETLTKVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|325285511|ref|YP_004261301.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica
DSM 7489]
gi|324320965|gb|ADY28430.1| ATP-dependent Clp protease proteolytic subunit [Cellulophaga lytica
DSM 7489]
Length = 182
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 82/169 (48%), Positives = 118/169 (69%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL ER VF+ G + D A + +LL+L+ + + EI L INSPGG VT+G AIYDT++
Sbjct: 15 KLLNERKVFLWGMVNDDSAKHVIDRLLYLDLQGNE-EIQLVINSPGGYVTSGFAIYDTIK 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+K P+ST C G AASMGS+LLS G KG RF P+A++++HQPSGG GQAS+IE A++
Sbjct: 74 SLKSPVSTVCTGLAASMGSILLSVGAKGRRFIQPHAQVMIHQPSGGAGGQASNIEIQAKE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+K + +I NCG+ +++V K DRD+ M+A E+ +G+VD +L
Sbjct: 134 IIKTRELSAKILADNCGQDFDKVMKDFDRDYWMNAEESVAYGIVDGILE 182
>gi|150251498|ref|YP_001312231.1| ATP-dependent Clp protease proteolytic subunit [Cycas taitungensis]
gi|160380551|sp|A6H5K6|CLPP_CYCTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149941548|dbj|BAF64972.1| ATP-dependent Clp protease proteolytic subunit [Cycas taitungensis]
Length = 195
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 76/199 (38%), Positives = 122/199 (61%), Gaps = 8/199 (4%)
Query: 16 LGL-VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ + VP V + E +RL +ER++F Q++D +A + +++L E+ K+
Sbjct: 1 MPIGVPKVPFRIPGEED-----NRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDENKD 55
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I YINSPGG V G++IYD MQF+ P + T CMG AASMGS +L+ GE R ALP+AR
Sbjct: 56 IYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPHAR 115
Query: 135 ILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++HQP S + GQA + A++++K++ + +YV+ GK + ++RD MSA+
Sbjct: 116 VMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISGDMERDVFMSAT 175
Query: 194 EACDWGVVDKV-LMSRIDI 211
EA +G+VD V + + D+
Sbjct: 176 EAQAYGIVDLVAVENTEDL 194
>gi|67460572|sp|Q8UD57|CLPP3_AGRT5 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
Length = 201
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 30 LFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIHDMIKF 88
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 89 IKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 148
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ +RL +I+ K G+T E++ K +DRD+ +SA +A D+G+V K++ S+ ++
Sbjct: 149 IKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSADDAKDYGLVGKIVESQSEL 201
>gi|159185132|ref|NP_355226.2| ATP-dependent Clp protease proteolytic subunit [Agrobacterium
tumefaciens str. C58]
gi|159140403|gb|AAK88011.2| ATP-dependent Clp protease, proteolytic subunit [Agrobacterium
tumefaciens str. C58]
Length = 193
Score = 154 bits (390), Expect = 6e-36, Method: Composition-based stats.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 22 LFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIHDMIKF 80
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 81 IKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 140
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ +RL +I+ K G+T E++ K +DRD+ +SA +A D+G+V K++ S+ ++
Sbjct: 141 IKMNQRLIKIFSKATGQTEEKIAKDIDRDYWLSADDAKDYGLVGKIVESQSEL 193
>gi|122202884|sp|Q2QD64|CLPP_CUCSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74027125|gb|AAZ94675.1| ATP-dependent protease [Cucumis sativus]
gi|115432828|gb|ABI97441.1| clp protease proteolytic subunit [Cucumis sativus]
gi|115498328|gb|ABI98770.1| clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 154 bits (390), Expect = 7e-36, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL ++R++F+ + + ++ I +++L E+
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ L+INSPGG V G+ ++DTMQF+ P + T C+G AASMGS +L GE R A P+
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ FS + + + +++ ++ + ++YV+ GK + + L+RD MS
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPLWVISEDLERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA G+VD V
Sbjct: 181 APEAQAHGIVDLV 193
>gi|78212385|ref|YP_381164.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9605]
gi|78196844|gb|ABB34609.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 225
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGE 89
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALPN+ I+LHQP
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPNSSIVLHQPR 149
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI N G++ EE+ K DR ++ +A ++G++
Sbjct: 150 SGARGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPQQAVEYGLI 209
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 210 DRVLSSRKDLP 220
>gi|209527270|ref|ZP_03275781.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|209492337|gb|EDZ92681.1| Endopeptidase Clp [Arthrospira maxima CS-328]
Length = 230
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 111/194 (57%), Gaps = 20/194 (10%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERI+++ + +D + LI AQLL+L+ +P+K I YINS G
Sbjct: 32 KERIIYLGSPLVSSDDYKRQLGVDVTKLIIAQLLYLQFSDPEKPIYFYINSTGTSWYTGD 91
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DTM ++KPP+ T C+GQA +++LSAG KG R +LP+A I+L+QP
Sbjct: 92 AIGQDTEAFAICDTMSYVKPPVHTICIGQAMGTAAMILSAGTKGCRTSLPHATIVLNQPR 151
Query: 142 GGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
G QA+DI+ A++++ K + +I +N G+ E++ K DR ++ A ++G+
Sbjct: 152 MGMGRSQATDIQIRAKEVLANKASILDILSQNTGQPVEKIAKDTDRMFYLTPEAAKEYGL 211
Query: 201 VDKVLMSRIDIEEK 214
+D+VL S ++ ++
Sbjct: 212 IDRVLESTKELPKQ 225
>gi|45657810|ref|YP_001896.1| ATP-dependent Clp protease-like, proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|161484953|ref|NP_712134.2| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
gi|67460497|sp|Q72R01|CLPP2_LEPIC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|45601050|gb|AAS70533.1| ATP-dependent CLP protease-like, proteolytic subunit [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|293385832|gb|AAN49152.2| ATP-dependent protease ClpP [Leptospira interrogans serovar Lai
str. 56601]
Length = 197
Score = 154 bits (389), Expect = 7e-36, Method: Composition-based stats.
Identities = 75/170 (44%), Positives = 113/170 (66%), Gaps = 2/170 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L R +F+ G + D + + +LL+LE ++P K+I+ YINSPGGVVT+GM ++DT++ I
Sbjct: 24 LDHRKIFLWGPVTDESSKDLVGKLLYLEMKDPGKKITFYINSPGGVVTSGMTVFDTIKMI 83
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHAQD 157
P+ T CMG AASMGS+LL+AG KG R PN ++++HQPS A+D++ HA++
Sbjct: 84 SSPVHTVCMGMAASMGSVLLAAGTKGERSIWPNGKVMIHQPSIGGQIVAPATDLKIHAEE 143
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
I+K K +LN+I CG ++E+ DRD+ M A EA +G+VDK+
Sbjct: 144 ILKTKTKLNQILADACGHPISKLEEDTDRDYYMDAEEAIKYGIVDKLATK 193
>gi|325293629|ref|YP_004279493.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
H13-3]
gi|325061482|gb|ADY65173.1| ATP-dependent Clp protease proteolytic subunit [Agrobacterium sp.
H13-3]
Length = 201
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 111/173 (64%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +C QL+ L A + +I +Y+NSPGG V +G +I+D ++F
Sbjct: 30 LFKSRSIFIYGGITQELAQKVCTQLVALAAASDD-DIRVYVNSPGGHVESGDSIHDMIKF 88
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G ASDIE A++I
Sbjct: 89 IKPKVYIIGTGWVASAGALIYVSVPKERRLCLPNTRFLLHQPSGGTRGMASDIEIQAREI 148
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ +RL +I+ K G++ E++ K +DRD+ + A EA +G+V K++ S+ ++
Sbjct: 149 IKMNQRLIKIFAKATGQSEEKIAKDIDRDYWLGAEEAKGYGLVGKIVESQSEV 201
>gi|169794098|ref|YP_001718462.1| ATP-dependent Clp protease proteolytic subunit [Manihot esculenta]
gi|157695910|gb|ABV66179.1| clp protease proteolytic subunit [Manihot esculenta]
Length = 195
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + DI +RL +ER++F+ ++ +A + +++L EN
Sbjct: 1 MPIGVPKVPFRNPGEDDSTWIDI-NRLYRERLLFLGQDVDSEIANQLIGLMVYLSIENAT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G+ R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP G+ Q + A++++K++ L IY + GK V + ++RD MS
Sbjct: 120 ARVMIHQPISGYYEAQIVEFVLEAEELLKLREILTRIYAQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|68164829|ref|YP_247625.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
gi|67511424|emb|CAJ00784.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL ++R++F+ + + ++ I +++L E+
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+ L+INSPGG V G+ ++DTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQAS-DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ FS + + + +++ ++ + ++YV+ GK + + ++RD MS
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPLWVIPEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA G+VD V
Sbjct: 181 APEAQAHGIVDLV 193
>gi|17231850|ref|NP_488398.1| ATP-dependent Clp protease-like protein [Nostoc sp. PCC 7120]
gi|17133494|dbj|BAB76057.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 220
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 71/178 (39%), Positives = 110/178 (61%), Gaps = 9/178 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV---------VTAGMA 91
KERIV++ + + LI AQLL+L++++P K I +YINS G T A
Sbjct: 32 KERIVYLGMPLVPAVTELIVAQLLYLQSDDPDKPIKIYINSTGTSGYSGEPIGFETEAFA 91
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTM++IKPPI T C+G A M ++LLSAG KG R +LP++ I+LHQP GQA+DI
Sbjct: 92 IYDTMKYIKPPIHTICIGSAMGMAAMLLSAGTKGCRASLPSSSIILHQPKSYAQGQATDI 151
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ A++++ K + +I+ + G+ E++ K +DR M+ +A D+G++D+V
Sbjct: 152 QIRAREVLVNKGSMVDIFARTTGQAPEKITKDMDRLLYMTPYQAKDYGLIDRVFEKEE 209
>gi|168049469|ref|XP_001777185.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671413|gb|EDQ57965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 154 bits (389), Expect = 8e-36, Method: Composition-based stats.
Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 17 GLVPMVVEQTNRGERSY---DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
G+V MV+ R D+ S L K RIVF+ + + L+ A+LL+L+ ++P+K
Sbjct: 18 GVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEK 77
Query: 74 EISLYINSPG--------GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
I +YINS G G T AIYDTM+++KPPI T C+G A +LLL+AG KG
Sbjct: 78 SIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLLAAGSKG 137
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R LP+A I+L QP F GQA+DI+ +++ +K L ++ ++ G++ E++ +
Sbjct: 138 NRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEELVKLLSRHTGQSPEKITDDIR 197
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIE 212
R EA D+G++DKVL + D +
Sbjct: 198 RPKYFKPDEAVDYGIIDKVLYAEGDEK 224
>gi|305664459|ref|YP_003860746.1| Protease subunit of ATP-dependent Clp protease [Maribacter sp.
HTCC2170]
gi|88708476|gb|EAR00712.1| Protease subunit of ATP-dependent Clp protease [Maribacter sp.
HTCC2170]
Length = 182
Score = 154 bits (389), Expect = 9e-36, Method: Composition-based stats.
Identities = 83/169 (49%), Positives = 123/169 (72%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ER VF+ G ++D A + +LL+L+ +N + EI L+INSPGG VT+G A+YDT++
Sbjct: 15 KLLEERKVFLWGMVDDDSAKHVIDRLLYLDMQNNK-EIQLFINSPGGYVTSGFAMYDTIK 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+K P+ST C G AASMGS+LLS G+KG RF P+A++++HQPSGG GQAS+IE A++
Sbjct: 74 SLKSPVSTICTGLAASMGSILLSVGKKGRRFIQPHAQVMIHQPSGGARGQASNIEIQAKE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+K K +I NCG+ ++ V + DRD+ M+A E+ ++G+VD VL
Sbjct: 134 IIKTKELSAQILADNCGQDFDTVMRDFDRDYWMNAEESIEYGIVDGVLE 182
>gi|303289849|ref|XP_003064212.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454528|gb|EEH51834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/209 (36%), Positives = 119/209 (56%), Gaps = 16/209 (7%)
Query: 16 LGL-VPMVVEQTNRG--ERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V +T + DI++ L +ERIV++ QI+D + + A +L+L+ +
Sbjct: 1 MPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWIGQQIDDELGNQLVATMLYLDTTDKS 60
Query: 73 -KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS------------LLL 119
K+I LYINS GG V MAI DTM+ IK + G A +MG +LL
Sbjct: 61 GKDIYLYINSEGGEVVPTMAILDTMKHIKSDVGCVGFGSARAMGGAFYLTLVPIRPRMLL 120
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
+ G KG R ALPN I+LH PSG G ASDI ++++KI+ ++N++ G+ E
Sbjct: 121 ACGAKGKRAALPNTCIMLHHPSGAARGAASDINNEGRELLKIRAKINDMIAGATGRPASE 180
Query: 180 VEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+++ + RD ++A +A D+GV+DKVL R
Sbjct: 181 IQENIRRDFHLTAEKALDYGVIDKVLYKR 209
>gi|91209012|ref|YP_538874.1| ATP-dependent Clp protease proteolytic subunit [Solanum
bulbocastanum]
gi|108773154|ref|YP_635664.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
gi|122196329|sp|Q27S24|CLPP_SOLTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122201813|sp|Q2MIG3|CLPP_SOLBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84371919|gb|ABC56237.1| clp protease proteolytic subunit [Solanum bulbocastanum]
gi|88656828|gb|ABD47081.1| clp protease proteolytic subunit [Solanum tuberosum]
Length = 198
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V+ + D+Y+RL +ER++F+ I ++ + +++L E+
Sbjct: 1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDEN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE+ L++NSPGG V G+AIYDTMQF++P I T C+G AASMGS +L+ G+ R A P+
Sbjct: 61 KELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPH 120
Query: 133 ARIL-LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR++ S + Q + A +++K++ L +Y + GK + V + ++RD MS
Sbjct: 121 ARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTRVYAERTGKPFWVVHEDMERDIFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQAYGIVDFV 193
>gi|298491710|ref|YP_003721887.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233628|gb|ADI64764.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 220
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 67/208 (32%), Positives = 121/208 (58%), Gaps = 15/208 (7%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP + +N+ + I R+ +ERI+F+ + +A + + +L+L++E+ K I LY
Sbjct: 9 VPYNIPGSNQ-WQWISIGQRMTQERILFLNQPLTTSLANSLISSILYLDSEDQSKPIYLY 67
Query: 79 INSPGG--------------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
INS G + + +AIYDTMQ+IK + T C GQA M +L+LS+G K
Sbjct: 68 INSLGDPVLAGRIDETAGMMSIKSCLAIYDTMQYIKSEVVTICFGQAVGMAALILSSGAK 127
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R +LP+A I L Q GQA+DI+ +A+++++ + + +I+ +N G+ +++ K
Sbjct: 128 GKRVSLPHASIALTQFQVAAQGQATDIQVNAEEVLRKRAIILDIFSQNTGQPADKITKDS 187
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
+R M+ EA ++G++D+VL + ++
Sbjct: 188 ERIFYMTPLEAKEYGLIDRVLENSKQLQ 215
>gi|168007320|ref|XP_001756356.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692395|gb|EDQ78752.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 241
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 78/207 (37%), Positives = 119/207 (57%), Gaps = 11/207 (5%)
Query: 17 GLVPMVVEQTNRGERSY---DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQK 73
G+V MV+ R D+ S L K RIVF+ + + L+ A+LL+L+ ++P+K
Sbjct: 22 GVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAVTELVMAELLYLQYDDPEK 81
Query: 74 EISLYINSPG--------GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
I +YINS G G T AIYDTM+++KPPI T C+G A +LLL+AG KG
Sbjct: 82 SIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYVKPPIFTLCVGNAWGEAALLLAAGSKG 141
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R LP+A I+L QP F GQA+DI+ +++ +K L ++ ++ G+T E++ +
Sbjct: 142 NRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEELVKLISRHTGQTVEKITDDIR 201
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIE 212
R EA D+G++DKVL + D +
Sbjct: 202 RPKYFKPDEAVDYGLIDKVLYAEGDEK 228
>gi|86605370|ref|YP_474133.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-3-3Ab]
gi|86553912|gb|ABC98870.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 210
Score = 154 bits (388), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 6/186 (3%)
Query: 34 DIYSRLLKERIVFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
D+ S LL+ERIV++ + + + LI QLL+L+ E+ +K I +YINS G
Sbjct: 19 DLASLLLQERIVYLGLPLAEEANANVTKLIVEQLLYLQYEDREKPIKMYINSTGTYSYDT 78
Query: 90 --MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AI DTM +IKPP+ T C+G A M ++LL+AG KG R +LPNA I+LHQP GG GQ
Sbjct: 79 AAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRASLPNATIVLHQPYGGTRGQ 138
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
ASDIE ++I+ ++ + E ++ G+ E ++K +R M+ EA +G++D+VL S
Sbjct: 139 ASDIEIRTREILTLRNMMLEELSRSTGQPIERIKKDTERLFFMTPEEAKAYGLIDQVLTS 198
Query: 208 RIDIEE 213
+ +
Sbjct: 199 SKALPK 204
>gi|33866182|ref|NP_897741.1| ATP-dependent Clp protease-like protein [Synechococcus sp. WH 8102]
gi|33639157|emb|CAE08163.1| ATP-dependent Clp protease proteolytic subunit 4 [Synechococcus sp.
WH 8102]
Length = 222
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 116/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLLFLE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI N G++ EE+ K DR ++ ++A ++G++
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEELSKDSDRMSYLTPAQAVEYGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL SR ++
Sbjct: 207 DRVLSSRKELP 217
>gi|114329680|ref|YP_740501.1| clp protease proteolytic subunit [Citrus sinensis]
gi|122166158|sp|Q09MF2|CLPP_CITSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113952646|gb|ABI49044.1| clp protease proteolytic subunit [Citrus sinensis]
Length = 196
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTN--RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ + DIY+RL +ER++F+ +E ++ + +++L EN
Sbjct: 1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL+AG R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP G F G Q + +++++++ L +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPIGAFYGAQTGEFILDTEELLRLREILTMVYVQRSGKPLWVVSEDMERDTFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|33862588|ref|NP_894148.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9313]
gi|124023702|ref|YP_001018009.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9303]
gi|33634504|emb|CAE20490.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|123963988|gb|ABM78744.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 223
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 115/194 (59%), Gaps = 19/194 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGHRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + +I N G++ E++ K DR ++ +A ++G++
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLKILASNTGRSIEQLSKDSDRMSYLTPGDAVEYGII 206
Query: 202 DKVLMSRIDIEEKS 215
D++L SR ++
Sbjct: 207 DRILSSRKELPSSE 220
>gi|309322471|ref|YP_003933985.1| clp protease proteolytic subunit [Eucalyptus grandis]
gi|308223305|gb|ADO23613.1| clp protease proteolytic subunit [Eucalyptus grandis]
Length = 195
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 120/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|149390378|ref|YP_001294377.1| ATP-dependent Clp protease proteolytic subunit [Dioscorea
elephantipes]
gi|160380552|sp|A6MMN2|CLPP_DIOEL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148668070|gb|ABR01454.1| clp protease proteolytic subunit [Dioscorea elephantipes]
Length = 203
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ ++++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDNEVSNQLVGLMVYLSIEDAT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V GMAIYDTMQF+ P + T CMG AASMGSL+L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGMAIYDTMQFVSPDVHTICMGLAASMGSLILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWAVSEDMERDAFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|122894015|ref|YP_001004211.1| clp protease proteolytic subunit [Ranunculus macranthus]
gi|160380563|sp|A1XGR3|CLPP_RANMC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85540829|gb|ABC70781.1| clp protease proteolytic subunit [Ranunculus macranthus]
Length = 201
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 73/193 (37%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVY-RLHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS LL GE R A P+
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDFV 192
>gi|11497551|ref|NP_054959.1| ATP-dependent Clp protease proteolytic subunit [Spinacia oleracea]
gi|18203258|sp|Q9M3K5|CLPP_SPIOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7636132|emb|CAB88752.1| ATP-dependent protease proteolytic subunit [Spinacia oleracea]
Length = 196
Score = 153 bits (387), Expect = 1e-35, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L ++Y + GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKPLWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G++D V
Sbjct: 181 ATEAQAHGIIDLV 193
>gi|72382718|ref|YP_292073.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL2A]
gi|72002568|gb|AAZ58370.1| endopeptidase Clp [Prochlorococcus marinus str. NATL2A]
Length = 224
Score = 153 bits (387), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 19/194 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLLFLE +N +K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A +++ K+ + EI N G++ +++ K DR ++ EA D+G++
Sbjct: 147 SGAQGQATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 202 DKVLMSRIDIEEKS 215
D+VL SR D+ +
Sbjct: 207 DRVLTSRKDLPSEK 220
>gi|11467785|ref|NP_050836.1| ATP-dependent Clp protease proteolytic subunit [Nephroselmis
olivacea]
gi|18203460|sp|Q9TL09|CLPP_NEPOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5880714|gb|AAD54807.1|AF137379_30 proteolytic subunit 2 of clp protease [Nephroselmis olivacea]
Length = 208
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE---RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + GE + D+Y+RL ++R++F+ ++ D ++ +C +++L AE+P
Sbjct: 1 MPVGVPKVPYRLP-GESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDP 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+ +YINSPGG VT+G+ ++D + ++T C+G AASM SL+LS G G R ALP
Sbjct: 60 SIPLFMYINSPGGSVTSGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALP 119
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+AR+++HQP GG GQASD+ + ++ +++ + + YV+ ++ E + L+RD MS
Sbjct: 120 HARMMIHQPEGGSRGQASDVMYESSEVERLRDIVVDCYVERTHQSRETIIIDLNRDLFMS 179
Query: 192 ASEACDWGVVDKV 204
+A +G++D V
Sbjct: 180 PRQARSYGLIDAV 192
>gi|124026439|ref|YP_001015554.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. NATL1A]
gi|123961507|gb|ABM76290.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 224
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 76/194 (39%), Positives = 114/194 (58%), Gaps = 19/194 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLLFLE +N +K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNSEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A +++ K+ + EI N G++ +++ K DR ++ EA D+G++
Sbjct: 147 SGAQGQATDIQIRANEVIHNKKAMLEILSHNTGRSVDQLSKDSDRMSYLNPHEAVDYGII 206
Query: 202 DKVLMSRIDIEEKS 215
D+VL SR D+ +
Sbjct: 207 DRVLTSRKDLPGEK 220
>gi|139389667|ref|YP_001123224.1| ATP-dependent protease subunit [Arabis hirsuta]
gi|160380543|sp|A4QK43|CLPP_ARAHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286422|dbj|BAF50048.1| ATP-dependent protease subunit [Arabis hirsuta]
Length = 196
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 117/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T MG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++KI+ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKIRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|145350842|ref|XP_001419805.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580037|gb|ABO98098.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 210
Score = 153 bits (386), Expect = 2e-35, Method: Composition-based stats.
Identities = 64/186 (34%), Positives = 110/186 (59%), Gaps = 4/186 (2%)
Query: 19 VP-MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP MV + GE D++ L ++RIVF+ +I++ +A CA+LL LE+E+P+ EI +
Sbjct: 26 VPVMVPDGRGGGE---DVFGALARDRIVFLGTRIDEQVAAETCARLLQLESEDPEGEIRV 82
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
++N G AI DTM+++ P+ST +G A +L++AG+KG R+ + +ARI+L
Sbjct: 83 WVNCVAGTQYCVTAILDTMEYVSCPVSTVALGCVAGPPVMLVAAGDKGKRYGMSSARIVL 142
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP GG +G + +++ A ++ + + K G+ +E+E + RD M EA D
Sbjct: 143 SQPLGGLAGTSIEVKIQATELNRNAKAQVGFIAKYTGRDADELEAMMARDTYMGVDEAID 202
Query: 198 WGVVDK 203
+G++D
Sbjct: 203 FGLIDH 208
>gi|317970580|ref|ZP_07971970.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0205]
Length = 225
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 78/192 (40%), Positives = 116/192 (60%), Gaps = 19/192 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ A++++ KR + E+ N GK+ EE+ K DR ++A +A ++G++
Sbjct: 147 SGARGQASDIQIRAKEVLHNKRTMLEMLAANTGKSTEELSKASDRMTYLTAEQAVEFGLI 206
Query: 202 DKVLMSRIDIEE 213
D+VL S+ D+
Sbjct: 207 DRVLTSQKDLPS 218
>gi|149390292|ref|YP_001294123.1| clp protease proteolytic subunit [Chloranthus spicatus]
gi|160380547|sp|A6MME7|CLPP_CHLSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146744212|gb|ABQ43284.1| clp protease proteolytic subunit [Chloranthus spicatus]
Length = 201
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 118/193 (61%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+ IYDTMQF+ P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI++HQP+ F QA + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 120 ARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWIVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|332170082|gb|AEE19337.1| Endopeptidase Clp [Krokinobacter diaphorus 4H-3-7-5]
Length = 178
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 1/170 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
S+LL +R +F+ G ++D A + +LL+L+A+ EI L+INSPGG VT+G A+YDT+
Sbjct: 9 SQLLDDRKIFLWGMVDDKSAKHVIDRLLYLDAQ-GHGEIQLFINSPGGYVTSGFAMYDTI 67
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ IK P+ST C G AASMGSLLLS GEKG RF P+AR+++HQPSGG GQASDIE AQ
Sbjct: 68 KMIKSPVSTICTGLAASMGSLLLSVGEKGRRFIQPHARVMIHQPSGGARGQASDIEITAQ 127
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+IVK K +I NCG+T+E++ K RDH M A E+ +G+ D V
Sbjct: 128 EIVKTKELSAQILADNCGQTFEKIMKDFQRDHWMGAEESVAYGIADGVYE 177
>gi|326909417|ref|YP_004327687.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
gi|308523531|gb|ADO33581.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
Length = 195
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + D+ +RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G+ R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP GF Q + A++++K++ L IY + GK V + ++RD MS
Sbjct: 120 ARVMIHQPIAGFYEAQIGEFVLEAEELLKLREILTRIYAQRTGKPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|149371988|ref|ZP_01891307.1| ATP-dependent Clp protease proteolytic subunit [unidentified
eubacterium SCB49]
gi|149355128|gb|EDM43689.1| ATP-dependent Clp protease proteolytic subunit [unidentified
eubacterium SCB49]
Length = 183
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 87/183 (47%), Positives = 128/183 (69%), Gaps = 2/183 (1%)
Query: 25 QTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
T + ++ D I ++ L +R +F+ GQ++D A + +L++L++ + + EI LYINSPG
Sbjct: 2 STEKKQKVQDRIENQQLDDRTIFLWGQVDDRSAKHVVDRLMYLDSISNE-EIKLYINSPG 60
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G VT+G ++YDT++ IK P+ST C G AASMGS+LLS GEKG RF P+AR+++HQPSGG
Sbjct: 61 GYVTSGFSMYDTIKSIKSPVSTICTGLAASMGSILLSVGEKGRRFIQPHARVMIHQPSGG 120
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
GQASDIE AQ+I+K K +I NCG+ +++V K RDH MSA E+ +G+VD
Sbjct: 121 ARGQASDIEITAQEILKTKEISAKILADNCGQDFDKVMKDFQRDHWMSAEESVAYGIVDG 180
Query: 204 VLM 206
++
Sbjct: 181 IME 183
>gi|330038335|ref|XP_003239570.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
gi|327206494|gb|AEA38672.1| ATP-dependent Clp protease proteolytic subunit [Cryptomonas
paramecium]
Length = 243
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 9/186 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV------- 86
D+ S LL RIV++ + + LI A+ LFL+ EN +K + +Y+NS G
Sbjct: 51 DLPSLLLHNRIVYLGMPLVPAVTELIVAEFLFLQYENSEKPLFMYLNSTGTSNPDGSSAG 110
Query: 87 --TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
T AI DTM +IKP + T C+GQA ++LLS GE R ALPNA I++HQP
Sbjct: 111 FETEAFAIADTMNYIKPSVHTICVGQAFGTSAMLLSNGEVNCRSALPNATIMIHQPRSQA 170
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQASDI A++++ +++ EI KN G++ +++ K R +S EA ++G++DK+
Sbjct: 171 RGQASDIAIKAREVLYNRKQCFEIIAKNSGQSLQKIMKDASRTKYLSPQEAMEYGLIDKI 230
Query: 205 LMSRID 210
L +
Sbjct: 231 LETPKK 236
>gi|218193030|gb|EEC75457.1| hypothetical protein OsI_12017 [Oryza sativa Indica Group]
gi|222625110|gb|EEE59242.1| hypothetical protein OsJ_11243 [Oryza sativa Japonica Group]
Length = 278
Score = 152 bits (385), Expect = 3e-35, Method: Composition-based stats.
Identities = 70/217 (32%), Positives = 123/217 (56%), Gaps = 23/217 (10%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G + D+ + LL RI+F+ I +A + +QL+ L A +
Sbjct: 65 SENENPPLMPAIM--TPAG--ALDLATVLLGNRIIFIGQYINSQVAQRVISQLVTLAAVD 120
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFI-------------------KPPISTFCMGQA 111
+ +I +Y+N PGG + + +AIYD M + KP + T C G
Sbjct: 121 EEADILIYLNCPGGSLYSILAIYDCMSWYILDMSICHAETVLIGFGLIKPKVGTVCFGVV 180
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
AS +++L+ GEKGMR+A+PNAR+++HQP G G ++ R + + + ++++++
Sbjct: 181 ASQAAIILAGGEKGMRYAMPNARVMIHQPQGVSEGNVEEVRRQVGETIYARDKVDKMFAA 240
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
G+T + V++ +RD MS+SEA D+G+VD +L +R
Sbjct: 241 FTGQTLDMVQQWTERDRFMSSSEAMDFGLVDALLETR 277
>gi|87302966|ref|ZP_01085770.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282462|gb|EAQ74421.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 224
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 114/191 (59%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLLFLE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTQLIIAQLLFLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGHRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ AQ+++ KR + E+ N G++ E++ K DR ++ EA ++G++
Sbjct: 147 SGARGQASDIQIRAQEVLHNKRVMLEMLSHNTGRSVEQLSKDSDRMTYLTPREALEYGLI 206
Query: 202 DKVLMSRIDIE 212
D++L S+ +
Sbjct: 207 DRILTSQKPLP 217
>gi|318040431|ref|ZP_07972387.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CB0101]
Length = 233
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 114/188 (60%), Gaps = 19/188 (10%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIFFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAIADTIRYVKPPVHTICIGQAMGTAAMILSAGTKGHRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQASDI+ A++++ K+ + E+ N G++ E++ K DR ++A +A ++G++
Sbjct: 147 SGARGQASDIQIRAKEVLHNKQTMLEMLSANTGRSVEQLSKDSDRMTYLTAHQAVEYGLI 206
Query: 202 DKVLMSRI 209
D+VL S+
Sbjct: 207 DRVLTSQK 214
>gi|86608098|ref|YP_476860.1| ATP-dependent Clp protease-like protein [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556640|gb|ABD01597.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 211
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 75/186 (40%), Positives = 114/186 (61%), Gaps = 6/186 (3%)
Query: 34 DIYSRLLKERIVFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
D+ S LL+ERIV++ + + + LI QLL+L+ E+ +K I +YINS G
Sbjct: 20 DLASLLLQERIVYLGLPLAEESNANVTKLIIEQLLYLQYEDREKPIKMYINSTGTYNYDT 79
Query: 90 --MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AI DTM +IKPP+ T C+G A M ++LL+AG KG R +LPNA I+LHQP GG GQ
Sbjct: 80 AAFAILDTMNYIKPPVHTICIGNAIGMAAMLLAAGAKGFRASLPNATIVLHQPYGGTRGQ 139
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
ASDIE ++I+ ++ + E ++ G+ E ++K +R M+ EA +G++D+VL S
Sbjct: 140 ASDIEIRTREILTLRNMMLEQLSRSTGQPMERIKKDTERLFFMTPEEAKAYGLIDQVLTS 199
Query: 208 RIDIEE 213
+ +
Sbjct: 200 SKGVPK 205
>gi|11466814|ref|NP_039410.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|12012|emb|CAA33972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|226633|prf||1603356BG ORF 216
Length = 216
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPNIYTTCLGIAASMPSFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|114799921|ref|YP_759272.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Hyphomonas neptunium ATCC 15444]
gi|114740095|gb|ABI78220.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Hyphomonas neptunium ATCC 15444]
Length = 200
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 119/188 (63%), Gaps = 1/188 (0%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
E T + + S L K R + +TG I+ A ++C +LL L AE+ + I + ++SPG
Sbjct: 13 ESTPANGPNTLVESALFKSRTILLTGGIDFKQARMVCERLLALSAESDE-PILMILSSPG 71
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G V +G I+D ++F+ P+ G AS G+L+ +A +K R++LPN R LLH+P GG
Sbjct: 72 GHVESGDMIHDMIKFVTAPVKVLGSGWVASAGALIYAAAQKENRYSLPNTRYLLHEPRGG 131
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
GQA+D+E A++I+K++ RLN I+ + GKT E+++K +RD M A EA D+G+V K
Sbjct: 132 VGGQATDVEIQAREIIKMRERLNRIFAEATGKTVEQIKKDTERDFWMGAQEAVDYGLVSK 191
Query: 204 VLMSRIDI 211
++ +R +I
Sbjct: 192 IIRNRREI 199
>gi|260434315|ref|ZP_05788285.1| Clp protease [Synechococcus sp. WH 8109]
gi|260412189|gb|EEX05485.1| Clp protease [Synechococcus sp. WH 8109]
Length = 225
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 73/191 (38%), Positives = 114/191 (59%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLL+LE +NP+K I YINS G
Sbjct: 30 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLYLEFDNPEKPIYFYINSTGTSWYSGD 89
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 90 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 149
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI N G++ E++ DR ++ +A ++G++
Sbjct: 150 SGARGQATDIQIRAKEVLHNKQAMLEILSTNTGRSVEDLSNDSDRMSYLTPQQAVEYGLI 209
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 210 DRVLSSRKDLP 220
>gi|126696837|ref|YP_001091723.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9301]
gi|126543880|gb|ABO18122.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 220
Score = 152 bits (384), Expect = 3e-35, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE E+P+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPP+ T C+GQA +++LS+G KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++K K+ + EI +N GKT EE+ K DR ++ EA D+GV+
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 202 DKVLMSRIDIEEK 214
D++L S+ D+ K
Sbjct: 207 DRILTSQKDLPNK 219
>gi|262400762|gb|ACY66251.1| ATP-dependent Clp protease proteolytic subunit [Brassica napus]
Length = 196
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DI +RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIINRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q ++ A++++K++ + +YV+ GK V + ++RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|302024225|ref|ZP_07249436.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus suis
05HAS68]
Length = 168
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 74/164 (45%), Positives = 112/164 (68%), Gaps = 2/164 (1%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
+TG +ED+MA I AQLL+L+A++P K+I LY+N+PGG V+AG+AI DTM FIK + T
Sbjct: 1 MLTGPVEDNMANSIIAQLLYLDAQDPTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQT 60
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--GGFSGQASDIERHAQDIVKIKR 163
MG AASMG+++ S+G KG RF LPNA ++HQP G Q +D+ A+ ++K +
Sbjct: 61 IVMGTAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRN 120
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+L +I N GKT +++ K +RD+ MSA E +G +D+++ +
Sbjct: 121 KLEKILADNSGKTVKQIHKDAERDYWMSAEETLAYGFIDQIVDN 164
>gi|290489452|gb|ADD31110.1| clp protease proteolytic subunit protein [Ximenia americana]
Length = 198
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 71/195 (36%), Positives = 113/195 (57%), Gaps = 6/195 (3%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E DIY++L +ER +F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPSRIPGEEYATWVDIYNQLYRERFLFLGQAVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDT+QF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTIQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARI---LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
ARI + S F Q + A++++K++ L +Y + GK V + ++RD
Sbjct: 121 ARIRVMIHQPASSYFEAQTGEFILEAEELLKLRETLTGVYGQRTGKPLWVVSEDMERDVF 180
Query: 190 MSASEACDWGVVDKV 204
MSA+EA G+VD V
Sbjct: 181 MSATEAQAHGIVDLV 195
>gi|78779794|ref|YP_397906.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9312]
gi|123969044|ref|YP_001009902.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. AS9601]
gi|78713293|gb|ABB50470.1| Endopeptidase Clp [Prochlorococcus marinus str. MIT 9312]
gi|123199154|gb|ABM70795.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
Length = 220
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE E+P+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPP+ T C+GQA +++LS+G KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPI 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++K K+ + EI +N GKT EE+ K DR ++ EA D+GV+
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 202 DKVLMSRIDIEEK 214
D++L S+ D+ K
Sbjct: 207 DRILTSQKDLPNK 219
>gi|78185115|ref|YP_377550.1| ATP-dependent Clp protease-like protein [Synechococcus sp. CC9902]
gi|78169409|gb|ABB26506.1| Endopeptidase Clp [Synechococcus sp. CC9902]
Length = 223
Score = 152 bits (383), Expect = 4e-35, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 115/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLLFLE ++P+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI N G+T EE+ K DR ++ EA ++G++
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 207 DRVLSSRKDLP 217
>gi|156618848|ref|YP_001430129.1| ATP-dependent Clp protease proteolytic subunit [Cuscuta reflexa]
gi|160380550|sp|A7M988|CLPP_CUSRE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|156556033|emb|CAM98416.1| ATP-dependent Clp protease proteolytic subunit [Cuscuta reflexa]
Length = 201
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 74/193 (38%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVV--EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + +R DIY+RL +ER +F+ +E +A + ++L ++
Sbjct: 1 MPIGVPRVRFQYRRDRSRVWIDIYNRLYRERCLFLAHVVESQIANQLVGLFIYLGVQDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I L+INSPGG + +G AIYDTMQF++P I T C+G AASMGS LL G R A P+
Sbjct: 61 KDIFLFINSPGGGIISGFAIYDTMQFVRPDIQTICVGLAASMGSFLLVGGAITKRLAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP F Q + A++++K++ L ++YV+ GK + + ++RD +S
Sbjct: 121 ARVMIHQPMSAFFETQTVEAILEAEELLKLRESLAKVYVQRTGKPDWVIAEDMERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
A+EA +G+VD V
Sbjct: 181 ATEAQSYGIVDVV 193
>gi|148241695|ref|YP_001226852.1| ATP-dependent Clp protease-like protein [Synechococcus sp. RCC307]
gi|147850005|emb|CAK27499.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 224
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 75/191 (39%), Positives = 113/191 (59%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLL+LE +NP K I YINS G
Sbjct: 31 KERIVYLGLPLFSDDDAKRQMGVDVTELIIAQLLYLEFDNPDKPIFFYINSTGTSWYSGD 90
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R +LPNA I+LHQP
Sbjct: 91 AIGFETEAFAICDTIRYVKPPVHTICIGQAMGTAAMILSAGAKGQRASLPNASIVLHQPR 150
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ AQ+++ KR + + +N G+T E++ DR ++ +A D+G++
Sbjct: 151 SGARGQATDIQIRAQEVLHNKRTMLSMLSENTGRTVEQLTADSDRMTYLTPDQAMDYGLI 210
Query: 202 DKVLMSRIDIE 212
D+VL SR ++
Sbjct: 211 DRVLSSRKELP 221
>gi|116072310|ref|ZP_01469577.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064832|gb|EAU70591.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 222
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 77/191 (40%), Positives = 115/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVT--- 87
KERIV++ + +D + LI AQLLFLE ++P+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQMGIDVTELIIAQLLFLEFDDPEKPIYFYINSTGTSWYSGD 86
Query: 88 ------AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT++++KPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 87 AIGFETEAFAICDTLRYVKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI N G+T EE+ K DR ++ EA ++G++
Sbjct: 147 SGAQGQATDIQIRAKEVLHNKQAMLEILSNNTGRTVEELSKNSDRMSYLTPHEAVEFGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 207 DRVLSSRKDLP 217
>gi|69214839|gb|AAZ03802.1| ATP-depedent Clp protease proteolytic subunit [Ranunculus
macranthus]
Length = 195
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS LL GE R A P+
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDFV 192
>gi|15640025|ref|NP_219478.1| ATP-dependent Clp protease proteolytic subunit [Treponema pallidum
subsp. pallidum str. Nichols]
gi|189026264|ref|YP_001934036.1| ATP-dependent Clp protease proteolytic subunit [Treponema pallidum
subsp. pallidum SS14]
gi|3323371|gb|AAC26595.1| ATP-dependent Clp protease proteolytic component (clpP-2)
[Treponema pallidum subsp. pallidum str. Nichols]
gi|189018839|gb|ACD71457.1| ATP-dependent Clp protease proteolytic component [Treponema
pallidum subsp. pallidum SS14]
Length = 237
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 116/190 (61%), Gaps = 2/190 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+ GE + + + L+ R + ++G+I +A I QL LE+ + K I +Y++SPGG
Sbjct: 50 HSESGESVF--FQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGG 107
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V AG AI+D ++F+K P+ T MG AS G L+L A +K RF L N+R L+HQP G
Sbjct: 108 DVDAGYAIFDVIRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQPLSGM 167
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+DIE HA+++ K + +LN + G + ++V + +RD+ + AS+A ++G++ +
Sbjct: 168 RGVATDIEIHARELEKTRSKLNALIASETGVSLDKVAQDTNRDYWLDASQALEYGLISNL 227
Query: 205 LMSRIDIEEK 214
+ R D+ +K
Sbjct: 228 IEKRADLPKK 237
>gi|11467286|ref|NP_043143.1| ATP-dependent Clp protease proteolytic subunit [Cyanophora
paradoxa]
gi|11467404|ref|NP_043261.1| ATP-dependent Clp protease proteolytic subunit [Cyanophora
paradoxa]
gi|3023515|sp|Q36863|CLPP1_CYAPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1016087|gb|AAA81174.1| ClpP1 protease subnit [Cyanophora paradoxa]
gi|1016205|gb|AAA81292.1| subunit of ClpP protease [Cyanophora paradoxa]
Length = 194
Score = 151 bits (382), Expect = 5e-35, Method: Composition-based stats.
Identities = 65/168 (38%), Positives = 106/168 (63%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
S+LL+ RI+ + ++D + I QLL+LE E+ K+I L+INSPGG VTAG+++YDT+
Sbjct: 22 SKLLQNRIILFSQTVDDEICNSIVGQLLYLENEDSTKDIRLFINSPGGSVTAGLSVYDTI 81
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + +ST C G AASMG++LL+AG + RFA ++RI++HQP S ++ +
Sbjct: 82 QNLSVDVSTICFGLAASMGAVLLAAGVENKRFAFASSRIMIHQPLSKVEAPWSHLDIQIR 141
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K LN I + + +++E +RD +SA+EA +G++D +
Sbjct: 142 NGAYFKNLLNNILSFHTKQELKQIETDTERDFFLSATEAKQYGIIDHI 189
>gi|225010913|ref|ZP_03701380.1| Endopeptidase Clp [Flavobacteria bacterium MS024-3C]
gi|225004960|gb|EEG42915.1| Endopeptidase Clp [Flavobacteria bacterium MS024-3C]
Length = 181
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 84/168 (50%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I + L+ER VF+ GQ++D A + +LL+L+ +N EI L INSPGG VT+G AIYD
Sbjct: 12 IEEKFLEERKVFLWGQVDDASAKHVIDRLLYLDLQNNN-EIQLVINSPGGYVTSGFAIYD 70
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
T++ +K P+ST C G AASMGS+LLSAG KG RF P+A++++HQPSGG GQAS+IE
Sbjct: 71 TIKSLKSPVSTVCSGLAASMGSILLSAGAKGRRFMQPHAQVMIHQPSGGARGQASNIEIQ 130
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
A++I+K + +I NCG+ ++V K DRD+ M+A E+ +G+VD
Sbjct: 131 AREIIKTRELSAQILADNCGQKVDKVMKDFDRDYWMNAEESLAYGIVD 178
>gi|146310154|ref|YP_001175228.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter sp.
638]
gi|145317030|gb|ABP59177.1| Endopeptidase Clp [Enterobacter sp. 638]
Length = 201
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ R + ++G+I+ +A + Q++ L++ + I LYINS GG V AG I+D ++
Sbjct: 26 KLLESRSIIISGEIDQALAEKVITQMILLQSVSND-PIKLYINSQGGHVEAGDTIHDFIK 84
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+P + G AS G + A +K R+ALPN R ++HQP GG GQA+DIE A++
Sbjct: 85 FIRPDVHVIGTGWVASAGITIFLAAKKEHRYALPNTRFMIHQPLGGVRGQATDIEIEARE 144
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+++ R+N++ G+ E+V+K DR+ MS EA D+G+V K++ D++
Sbjct: 145 IIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPGEALDYGIVGKIITHYDDLK 199
>gi|225544148|ref|YP_002720137.1| clpP [Jatropha curcas]
gi|224979589|gb|ACN72716.1| clpP [Jatropha curcas]
Length = 195
Score = 151 bits (382), Expect = 6e-35, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 117/193 (60%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + D+ +RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G+ R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP GF Q + A++++K++ L IY + GK V + ++RD MS
Sbjct: 120 ARVMIHQPIAGFYEAQIVEFVLEAEELLKLREILTRIYAQRTGKPLWIVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|156084894|ref|XP_001609930.1| ATP-dependent Clp protease proteolytic subunit 1 [Babesia bovis
T2Bo]
gi|154797182|gb|EDO06362.1| ATP-dependent Clp protease proteolytic subunit 1, putative [Babesia
bovis]
Length = 225
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 73/169 (43%), Positives = 117/169 (69%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ R +F++G++ D + + Q+ + ENP + I YINSPGG V+AG+AIYD +Q +K
Sbjct: 45 RTRTLFLSGELNDEKSYRLINQIFRMNEENPNENIKFYINSPGGSVSAGLAIYDILQSLK 104
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ T C+GQAASMG+ LL+AG KG+R A+PN+RI++HQP GG G+ +DI+ A +I+
Sbjct: 105 MRVETICIGQAASMGAFLLAAGAKGLRSAMPNSRIMIHQPLGGAHGEVTDIKIQANEILH 164
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
I++ LN + GK+ E+VE+ +RD+ M SEA ++G++D++ +R
Sbjct: 165 IRQILNAHFSHFTGKSIEQVEQDCERDYYMRPSEAMEYGLIDRICTTRT 213
>gi|159903902|ref|YP_001551246.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9211]
gi|159889078|gb|ABX09292.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 115/191 (60%), Gaps = 19/191 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE +NP K + YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIVAQLLYLEFDNPDKPVYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPP+ T C+GQA +++LSAG KG R ALP++ I+LHQP
Sbjct: 87 AIGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSAGTKGQRAALPHSSIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++ K+ + EI KN G++ EE+ K DR ++ ++A ++G++
Sbjct: 147 SGAQGQATDIQIRAKEVIHNKQSMLEILSKNTGRSVEELSKDSDRMSYLNPNQAVEYGLI 206
Query: 202 DKVLMSRIDIE 212
D+VL SR D+
Sbjct: 207 DRVLKSRKDLP 217
>gi|33240836|ref|NP_875778.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. marinus str. CCMP1375]
gi|33238365|gb|AAQ00431.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 221
Score = 151 bits (381), Expect = 6e-35, Method: Composition-based stats.
Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVV---- 86
KERIV++ + +D + LI AQLLFLE +NP+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLFLEFDNPEKPIYFYINSTGTSWHTGD 86
Query: 87 -----TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
T AI DT+ +IKPPI T C+GQA +++LS G KG R ALP+A I+LHQP
Sbjct: 87 AIGFETEAFAICDTISYIKPPIHTICIGQAMGTAAVILSGGSKGHRAALPHASIVLHQPR 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G SGQA+DI+ A++++ K+ + EI KN GK+ ++ K DR ++ EA ++G++
Sbjct: 147 SGASGQATDIQIRAKEVIHNKQAMLEILSKNTGKSVSQLSKDSDRMSYLNPHEAVEYGLI 206
Query: 202 DKVLMSRIDIEEK 214
D+VL SR D+ +
Sbjct: 207 DRVLTSRKDLPKN 219
>gi|86131298|ref|ZP_01049897.1| Clp protease [Dokdonia donghaensis MED134]
gi|85818709|gb|EAQ39869.1| Clp protease [Dokdonia donghaensis MED134]
Length = 182
Score = 151 bits (381), Expect = 7e-35, Method: Composition-based stats.
Identities = 91/184 (49%), Positives = 128/184 (69%), Gaps = 3/184 (1%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
+E+ + + + D ++LL +R +F+ G ++D A + +LL+L+A+ EI L+INSP
Sbjct: 1 MEKKIKVQDAID--NQLLNDRKIFLWGMVDDKSAKHVIDRLLYLDAQ-GHDEIQLFINSP 57
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG VT+G A+YDT++ IK P+ST C G AASMGSLLLS GEKG RF P+AR+++HQPSG
Sbjct: 58 GGYVTSGFAMYDTIKMIKSPVSTICTGLAASMGSLLLSVGEKGRRFIQPHARVMIHQPSG 117
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G GQASDIE AQ+IVK K +I NCG+T++++ K RDH M A E+ D+G+VD
Sbjct: 118 GARGQASDIEITAQEIVKTKELSAQILADNCGQTFDKIMKDFQRDHWMGADESVDYGIVD 177
Query: 203 KVLM 206
V
Sbjct: 178 GVYE 181
>gi|157413875|ref|YP_001484741.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9215]
gi|254526964|ref|ZP_05139016.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|157388450|gb|ABV51155.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538388|gb|EEE40841.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 220
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE E+P+K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFEDPEKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPP+ T C+GQA +++LS+G KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTISYIKPPVHTICIGQAMGTAAVILSSGTKGQRAALPHASIVLHQPI 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++K K+ + EI +N GKT +E+ K DR ++ EA D+GV+
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKTIDELSKDSDRMSYLNPQEALDYGVI 206
Query: 202 DKVLMSRIDIEEK 214
D++L S+ D+ K
Sbjct: 207 DRILTSQKDLPNK 219
>gi|298491709|ref|YP_003721886.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233627|gb|ADI64763.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 229
Score = 150 bits (380), Expect = 8e-35, Method: Composition-based stats.
Identities = 72/192 (37%), Positives = 111/192 (57%), Gaps = 19/192 (9%)
Query: 41 KERIVFVTGQ----------IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ I + LI AQLL+L+ +NP+K I YINS G
Sbjct: 32 KERIVYLGMPLVSADEYKRQIGVDVTKLIIAQLLYLKFDNPEKPIFFYINSTGTSWYTGD 91
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IK P+ T C+GQA +L+LSAG KG R +LP+A I+L+QP
Sbjct: 92 SIGYETEAFAICDTIDYIKTPVHTICIGQAIGTAALILSAGTKGFRASLPHATIVLNQPR 151
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ +A++++ K + +I+ KN G+T ++ K +R ++ EA ++G++
Sbjct: 152 SGTRGQATDIQIYAKEVLANKAAILDIFSKNTGQTPAKIAKDTERMFYLTPQEAKEYGLI 211
Query: 202 DKVLMSRIDIEE 213
D VL S D+ +
Sbjct: 212 DIVLASMKDLPK 223
>gi|295132831|ref|YP_003583507.1| ATP-dependent Clp protease proteolytic subunit [Zunongwangia
profunda SM-A87]
gi|294980846|gb|ADF51311.1| ATP-dependent Clp protease proteolytic subunit [Zunongwangia
profunda SM-A87]
Length = 182
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 119/169 (70%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ L ER +F+ G ++D A + +L++L+ E + EI LYINSPGG VT G AIYDT+Q
Sbjct: 15 KFLDERKIFMWGPVDDKSAKHVIDRLIYLDLEGKE-EIQLYINSPGGYVTDGFAIYDTIQ 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I P+ST C G AASMGS+LLSAG+KG RF P+A++++HQPSGG GQAS+IE A +
Sbjct: 74 AIDAPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQPSGGARGQASNIEIQATE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+K K +I +NCG+T E+V K +RD+ M A E+ D+G+VD +L
Sbjct: 134 ILKTKELSAKILAENCGQTVEKVMKDFNRDYWMDAKESLDYGIVDAILK 182
>gi|226470102|emb|CAX70332.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Schistosoma japonicum]
Length = 179
Score = 150 bits (380), Expect = 9e-35, Method: Composition-based stats.
Identities = 82/130 (63%), Positives = 111/130 (85%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP+V+++T GER+YDIYSRLLK+RI+ + G I D +A L+ AQLL+L++E+ + I
Sbjct: 46 MSLVPIVLDKTTHGERAYDIYSRLLKDRIICLMGAISDEVAGLVVAQLLYLQSEDKKIPI 105
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+YINSPGGVVTAG+AIYDTMQFIKPP++T+C+GQA+SMGSLLL+AG G+RFALP++RI
Sbjct: 106 HIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQASSMGSLLLAAGAPGLRFALPHSRI 165
Query: 136 LLHQPSGGFS 145
++HQPSG
Sbjct: 166 MVHQPSGSAH 175
>gi|159161275|ref|YP_001542553.1| clp protease proteolytic subunit [Cuscuta exaltata]
gi|158938700|gb|ABW83717.1| clp protease proteolytic subunit [Cuscuta exaltata]
Length = 202
Score = 150 bits (380), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 114/194 (58%), Gaps = 5/194 (2%)
Query: 16 LGL-VPMVVEQ--TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q +R DIY+RL +ER +F+ ++ +A + ++L ++
Sbjct: 1 MPIGVPRVRFQYRRDRSRVWIDIYNRLYRERCLFLAHVVDSQIANQLVGLFIYLGVQDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I L+INSPGG + +G AIYDTMQF++P I T C+G AASMGS LL G R A P+
Sbjct: 61 KDIFLFINSPGGGIISGFAIYDTMQFVRPDIQTICVGLAASMGSFLLVGGAITKRLAFPH 120
Query: 133 AR--ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A ++ S F Q + A++++K++ L E+YV+ GK + + ++RD +
Sbjct: 121 AWRVMIHQPMSAFFETQTVEAILEAEELLKLRESLAEVYVQRTGKPGWVIAEDMERDVFL 180
Query: 191 SASEACDWGVVDKV 204
SA+EA +G+VD V
Sbjct: 181 SATEAQAYGIVDVV 194
>gi|255580803|ref|XP_002531222.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223529182|gb|EEF31158.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 314
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 111/189 (58%), Gaps = 8/189 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 114 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKGGEKLGY 173
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AI+D M ++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP G F
Sbjct: 174 ETEAFAIHDVMGYVKPPIFTLCVGNAWGEAALLLAAGSKGNRSALPSSTIMIKQPIGRFQ 233
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+E ++I +K L + K GK+ E+E + R + +EA ++G++DKVL
Sbjct: 234 GQATDVELARKEISNVKAELVNLLAKYIGKSPGEIEADISRPKYFTPAEAVEYGIIDKVL 293
Query: 206 MSRIDIEEK 214
+ E++
Sbjct: 294 YNERGTEDR 302
>gi|254409400|ref|ZP_05023181.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
gi|196183397|gb|EDX78380.1| Clp protease [Microcoleus chthonoplastes PCC 7420]
Length = 223
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/176 (40%), Positives = 107/176 (60%), Gaps = 9/176 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA---------GMA 91
ERIV++ + + LI A+LL+L+ +NP K I +YINS G A
Sbjct: 36 NERIVYLGLPLVPQVTELIVAELLYLQYDNPDKPIKIYINSTGTSRYDGEPIGFETEAFA 95
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I DTM +I+PPI T C+G A M ++LLSAG KG R +LPNA I+LHQP GQA+DI
Sbjct: 96 ICDTMNYIQPPIHTICIGSAMGMAAMLLSAGTKGCRASLPNASIVLHQPKSYARGQATDI 155
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ A++++ K + I KN G++ E++ K ++R M+ EA ++G++D+VL S
Sbjct: 156 QIRAKEVLANKITMMGILAKNTGQSAEKITKDMERMLYMTPYEAKEYGLIDRVLES 211
>gi|50233996|ref|YP_052774.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|109156611|ref|YP_654230.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|68052132|sp|Q6ENE9|CLPP_ORYNI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841130|sp|P0C312|CLPP_ORYSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841131|sp|P0C313|CLPP_ORYSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841132|sp|P0C314|CLPP_ORYSJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|42795503|gb|AAS46070.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|42795570|gb|AAS46136.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|42795634|gb|AAS46199.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|49615020|dbj|BAD26803.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|290790590|gb|ADD62850.1| clp protease proteolytic subunit [Oryza sativa Japonica Group]
gi|290790659|gb|ADD62918.1| clp protease proteolytic subunit [Oryza meridionalis]
gi|290790728|gb|ADD62986.1| clp protease proteolytic subunit [Oryza australiensis]
Length = 216
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|18202219|sp|O84003|CLPP2_TREPA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 199
Score = 150 bits (379), Expect = 1e-34, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 112/179 (62%)
Query: 36 YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ + L+ R + ++G+I +A I QL LE+ + K I +Y++SPGG V AG AI+D
Sbjct: 21 FQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGGDVDAGYAIFDV 80
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++F+K P+ T MG AS G L+L A +K RF L N+R L+HQP G G A+DIE HA
Sbjct: 81 IRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQPLSGMRGVATDIEIHA 140
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+++ K + +LN + G + ++V + +RD+ + AS+A ++G++ ++ R D+ +K
Sbjct: 141 RELEKTRSKLNALIASETGVSLDKVAQDTNRDYWLDASQALEYGLISNLIEKRADLPKK 199
>gi|330837420|ref|YP_004412061.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
coccoides DSM 17374]
gi|329749323|gb|AEC02679.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
coccoides DSM 17374]
Length = 246
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/194 (37%), Positives = 117/194 (60%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P E+T + + +LLK R + ++G+I+ A + QLL +EAE+ + L
Sbjct: 53 VMPDKEEKTPVVPQDPALNDKLLKTRSILLSGEIDKECADRLIRQLLVMEAEDGDAPVYL 112
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG V AG AIYD ++F+ PI+ MG AS +L+L + R LP++ L+
Sbjct: 113 YINSPGGDVDAGYAIYDMIRFVSCPITIIGMGLVASAAALILLSVPADRRVGLPDSTYLI 172
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
HQP G G A+DIE HA+ I K++ +L+ + GK+ EEV + +RDH + A EA D
Sbjct: 173 HQPLSGMKGVATDIEIHARQIEKLRAKLDGVIAAATGKSVEEVAEDTERDHWLDAGEARD 232
Query: 198 WGVVDKVLMSRIDI 211
+G++ +++ SR ++
Sbjct: 233 YGLISRIVSSRKEL 246
>gi|254501110|ref|ZP_05113261.1| Clp protease [Labrenzia alexandrii DFL-11]
gi|222437181|gb|EEE43860.1| Clp protease [Labrenzia alexandrii DFL-11]
Length = 204
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 73/173 (42%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L + R V +TG + MA +CA+LL L A+ I++ ++SPGG V +G I+D ++F
Sbjct: 32 LFEARTVLITGPVTQDMARDVCARLLAL-AQVSNDPITVIVSSPGGHVESGDMIHDAIKF 90
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I P + MG AS G+L+ + K +RF PN R LLHQPSGG G A+DIE A++I
Sbjct: 91 ISPEVRILGMGWVASAGALIYVSVPKELRFCTPNTRFLLHQPSGGAGGMATDIEIQAKEI 150
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K++ RLN+I+ G+ E +EK DRD+ MS E D+G+V KV+ S ++
Sbjct: 151 IKMRDRLNKIFADATGQPIERIEKDTDRDYWMSPEEGIDYGLVGKVVTSVNEL 203
>gi|290790864|gb|ADD63120.1| clp protease proteolytic subunit [Microlaena stipoides]
Length = 216
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRGEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|325126890|ref|YP_004286127.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
gi|324022802|gb|ADY15376.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
Length = 196
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/196 (36%), Positives = 119/196 (60%), Gaps = 6/196 (3%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+ +RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPRVPFRSPGEEDAVWIDV-NRLYRERLLFLGQGVDNEISNQLIGLMVYLSIEDET 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P I T CMG AASMGS +L GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTVCMGLAASMGSFILVGGEITKRLAFPH 119
Query: 133 A-RILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A R+++HQP+ F Q + A++++K++ + +Y + GK V + ++RD M
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYAQRTGKPLWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKVLM 206
SA+EA G+VD V
Sbjct: 180 SATEAQAHGIVDLVAT 195
>gi|296101088|ref|YP_003611234.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
gi|295055547|gb|ADF60285.1| ATP-dependent Clp protease proteolytic subunit [Enterobacter
cloacae subsp. cloacae ATCC 13047]
Length = 198
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ R + ++G+I +A + QL+ L++ + I LYINS GG V AG I+D ++
Sbjct: 23 KLLESRSIVISGEINQALAEKVITQLILLQSVSND-PIKLYINSQGGHVEAGDTIHDFIK 81
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+P + G AS G + A +K R++LPN R ++HQP GG GQA+DIE A++
Sbjct: 82 FIRPDVHVIGTGWVASAGITIFLAAKKEHRYSLPNTRFMIHQPLGGVRGQATDIEIEARE 141
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+++ R+N++ G+ E+V+K DR+ MS +EA D+G+V K++ D++
Sbjct: 142 IIRMLDRVNKLIADATGQPLEKVKKDTDRNFWMSPAEALDYGIVGKLITHYDDLK 196
>gi|139389975|ref|YP_001123575.1| ATP-dependent protease subunit [Draba nemorosa]
gi|160380553|sp|A4QL44|CLPP_DRANE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286777|dbj|BAF50399.1| ATP-dependent protease subunit [Draba nemorosa]
Length = 196
Score = 150 bits (378), Expect = 1e-34, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ DIY+RL +ER+ F+ +++ ++ + + +++L E
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V +GMAIYDTMQF++P + T CMG AAS+ S +L G R A P+
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++KI+ + +YV+ GK V + + RD MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELIKIRETITRVYVQRTGKPIWVVSEDMKRDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G VD V
Sbjct: 181 ATEAQAHGNVDLV 193
>gi|297608276|ref|NP_001061378.2| Os08g0252200 [Oryza sativa Japonica Group]
gi|40253575|dbj|BAD05521.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|255678293|dbj|BAF23292.2| Os08g0252200 [Oryza sativa Japonica Group]
Length = 216
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAICDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|71028320|ref|XP_763803.1| ATP-dependent Clp protease proteolytic subunit [Theileria parva
strain Muguga]
gi|68350757|gb|EAN31520.1| ATP-dependent Clp protease proteolytic subunit, putative [Theileria
parva]
Length = 241
Score = 150 bits (378), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/167 (44%), Positives = 117/167 (70%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
K R++F++G++ D ++ I + +L + +P I YINSPGG VTAG+AI+D ++ +K
Sbjct: 74 KNRMIFLSGELNDKVSFKIISSILRINENDPNLPIKFYINSPGGSVTAGLAIFDVLRSLK 133
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ T +GQAASMG+ LL++G KGMR+A+PN+RI++HQP GG GQASDIE A +I++
Sbjct: 134 MPVETVSLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQPLGGAHGQASDIEIQANEILQ 193
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
I+ LN + GK+ +E+EK RD+ M SEA +G++D ++ +
Sbjct: 194 IREILNTNLSRFTGKSVQEIEKDCSRDNYMRPSEALQYGLIDHIIQT 240
>gi|91202650|emb|CAJ72289.1| similar to ATP-dependent endopeptidase Clp [Candidatus Kuenenia
stuttgartiensis]
Length = 208
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 113/179 (63%), Gaps = 1/179 (0%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D+ +RLLK R + VT ++ MA + QLL LEA + ++I ++INSPGG AG A+Y
Sbjct: 30 DLIARLLKTRTIIVTDEVNKKMAERVITQLLLLEA-DNDEDIRVFINSPGGDADAGFAMY 88
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D ++F+KP I C G AS ++L +K R++LP++RIL+HQPS G G ASD++
Sbjct: 89 DMLRFVKPKIKAICSGVVASAAVIILLGAKKEDRYSLPSSRILIHQPSTGIHGTASDLQI 148
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A +I+K + ++N + G+ +VE R+ MSA EAC +G+V+K++ S D++
Sbjct: 149 EATEILKCREKMNRMISVETGQPIGKVETDTKRNFWMSAEEACQYGLVNKIISSSDDLK 207
>gi|325210985|ref|YP_004286029.1| clp protease proteolytic subunit [Gossypium thurberi]
gi|290775847|gb|ADD62343.1| clp protease proteolytic subunit [Gossypium thurberi]
Length = 196
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/194 (38%), Positives = 120/194 (61%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+ +RL +ER++F+ +++ ++ + +++L EN
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS LL+ GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 119
Query: 133 A-RILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A R+++HQP+ F Q + A++++K++ L +YV+ GK V + ++RD M
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|188534632|ref|YP_001908429.1| ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
gi|188029674|emb|CAO97553.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
tasmaniensis Et1/99]
Length = 198
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 115/198 (58%), Gaps = 2/198 (1%)
Query: 16 LGLVPMVVEQTNRGERSYDIY-SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ P E+ + E+S + ++LL+ R + ++G+I +A + AQLL L+ E +
Sbjct: 1 MSEEPEKKEENGQEEKSSALAVNKLLQSRSIIISGEINQALAEKVTAQLLILQ-EMGDEP 59
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L+INS GG V AG I+D ++F++P + G AS G + A K R+ LPN R
Sbjct: 60 IKLFINSQGGHVEAGDTIHDMIRFVRPEVLVIGTGWVASAGITIFLAANKENRYTLPNTR 119
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++HQP GG G+ SDIE A+++++ + R+N++ G+ E+VEK D ++ MS +
Sbjct: 120 FMIHQPLGGVRGKVSDIEIEAKELLRARARINQLISNATGQPLEKVEKDTDSNYWMSPEQ 179
Query: 195 ACDWGVVDKVLMSRIDIE 212
A D+G+ V+ S +++
Sbjct: 180 AIDYGIATHVITSWNELK 197
>gi|194033171|ref|YP_002000510.1| ATP-dependent Clp protease proteolytic subunit [Brachypodium
distachyon]
gi|193075579|gb|ACF08662.1| ATP-dependent protease proteolytic subunit [Brachypodium
distachyon]
Length = 216
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYQIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|291060402|gb|ADD73137.1| Clp protease [Treponema pallidum subsp. pallidum str. Chicago]
Length = 201
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 67/179 (37%), Positives = 112/179 (62%)
Query: 36 YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ + L+ R + ++G+I +A I QL LE+ + K I +Y++SPGG V AG AI+D
Sbjct: 23 FQKFLETRQILLSGEISKDLAEGIVRQLFVLESLSVSKPIYMYVDSPGGDVDAGYAIFDV 82
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++F+K P+ T MG AS G L+L A +K RF L N+R L+HQP G G A+DIE HA
Sbjct: 83 IRFVKTPVYTIGMGLVASAGVLVLLAAKKDCRFGLRNSRYLIHQPLSGMRGVATDIEIHA 142
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+++ K + +LN + G + ++V + +RD+ + AS+A ++G++ ++ R D+ +K
Sbjct: 143 RELEKTRSKLNALIASETGVSLDKVAQDTNRDYWLDASQALEYGLISNLIEKRADLPKK 201
>gi|330991950|ref|ZP_08315899.1| ATP-dependent Clp protease proteolytic subunit 2 [Gluconacetobacter
sp. SXCC-1]
gi|329760971|gb|EGG77466.1| ATP-dependent Clp protease proteolytic subunit 2 [Gluconacetobacter
sp. SXCC-1]
Length = 224
Score = 149 bits (377), Expect = 2e-34, Method: Composition-based stats.
Identities = 75/179 (41%), Positives = 112/179 (62%), Gaps = 3/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ SRL +R V V G I D +A + +LL L + + I +Y+NSPGG V +G I+D
Sbjct: 46 LESRLFDQRKVLVFGPINDKIARDVTGRLLALAGASDK-PIDVYVNSPGGHVESGDTIHD 104
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++F+ PI+ G AS G+L+ +AG K RF LPN R LLHQP GG G A+DI+
Sbjct: 105 MIRFVDSVAPINMIGTGWVASAGALIFAAGNKERRFCLPNTRFLLHQPMGGVRGPATDID 164
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++IVK++ RLN ++ + G+ YE+V K DR++ MSA EA ++G+V +V+ D+
Sbjct: 165 IEAREIVKMRARLNHLFARETGQPYEKVCKDTDRNYWMSAPEAIEYGLVTRVIDKISDL 223
>gi|313184018|ref|YP_004021175.1| clp protease proteolytic subunit [Castanea mollissima]
gi|309321545|gb|ADO65085.1| clp protease proteolytic subunit [Castanea mollissima]
Length = 196
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 118/194 (60%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DI +RL + R++F+ +++ ++ I +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AAS+GS LL GE R A P+
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 119
Query: 133 A-RILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A R+++HQP+ F A + A++++K++ + +YV+ G V + ++RD M
Sbjct: 120 ARRVMIHQPASSFYEAPAGEFILEAEEMMKLRETITGVYVQRTGTPLWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SATEAQAHGIVDHV 193
>gi|221055665|ref|XP_002258971.1| ATP-dependent CLP protease [Plasmodium knowlesi strain H]
gi|193809041|emb|CAQ39744.1| ATP-dependent CLP protease, putative [Plasmodium knowlesi strain H]
Length = 372
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/169 (40%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I + +QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 189 FKKRIIYLTEEINKKTTDEMISQLLYLDNINHD-DIKIYINSPGGSINEGLAILDIFNYI 247
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R +LPN RI++HQP G GQ DIE ++I+
Sbjct: 248 KSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGQPQDIEIQTKEIL 307
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L +T E +EK DRDH M+A EA +G++D+V+ ++
Sbjct: 308 YLKKLLYNYLSTFTNQTTETIEKDSDRDHYMNALEAKRYGIIDEVIETK 356
>gi|319953820|ref|YP_004165087.1| ATP-dependent clp protease proteolytic subunit clpp [Cellulophaga
algicola DSM 14237]
gi|319422480|gb|ADV49589.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cellulophaga
algicola DSM 14237]
Length = 182
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 84/169 (49%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
++L+ER VF+ G ++D A + +LL+L+ +N + EI LYINSPGG VT+G A+YDT++
Sbjct: 15 KMLEERKVFLWGMVDDDSAKHVIDRLLYLDMQNDK-EIQLYINSPGGYVTSGFAMYDTIK 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+K P+ST C G AASMGS+LLS G+KG RF P+A++++HQPSGG GQAS+IE A++
Sbjct: 74 SLKSPVSTICTGLAASMGSILLSVGKKGRRFIQPHAQVMIHQPSGGARGQASNIEIQAKE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+K K I NCG+ Y+ V K DRD+ M A E+ +G+VD +L
Sbjct: 134 IIKTKELSARILADNCGQDYDRVMKDFDRDYWMGAEESIAYGIVDGILE 182
>gi|295065752|ref|YP_003587692.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
gi|251765276|gb|ACT15430.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
Length = 219
Score = 149 bits (376), Expect = 2e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEDATWVDLYNVMYRERTLFLGQEIRAEITGHITGLMVYLSIEDGN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIYLFINSPGGWLISGMAIFDTMQTVTPDIYTICIGIAASMASFILLGGEPACRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR +LHQP+ + + + +++ K+K + +Y GK + V + ++RD MS
Sbjct: 121 ARNMLHQPASAYYRARTREFFAEVEELHKVKDMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDAV 193
>gi|295098456|emb|CBK87546.1| Protease subunit of ATP-dependent Clp proteases [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 200
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ R + ++G+I +A + Q++ L++ + I LYINS GG V AG I+D ++
Sbjct: 25 KLLESRSIVISGEINQELAQKVITQMILLQSVSND-PIKLYINSQGGHVEAGDTIHDFIK 83
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+P + G AS G + A +K R+ALPN R ++HQP GG GQA+DIE A++
Sbjct: 84 FIRPEVHVIGTGWVASAGITIFLAAKKEHRYALPNTRFMIHQPLGGVRGQATDIEIEARE 143
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
I+++ R+N++ G+ E+V+K DR+ MS +EA D+G+V K++ ++
Sbjct: 144 IIRMLERVNKLIADATGQPLEKVKKDTDRNFWMSPAEALDYGIVGKLITHYDEL 197
>gi|69214837|gb|AAZ03801.1| ATP-depedent Clp protease proteolytic subunit [Nuphar advena]
Length = 196
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/194 (37%), Positives = 117/194 (60%), Gaps = 6/194 (3%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E DI +RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDI-NRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYD MQ + P + T CMG AASMGS +L GE R A P+
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 119
Query: 133 A-RILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A R+++HQP+ F QA + A++++K++ L +YV+ GK V + ++RD M
Sbjct: 120 ARRVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFM 179
Query: 191 SASEACDWGVVDKV 204
SA+EA G+VD V
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|48478794|ref|YP_024401.1| ATP-dependent Clp protease proteolytic subunit [Saccharum hybrid
cultivar SP-80-3280]
gi|50812552|ref|YP_054654.1| ATP-dependent Clp protease proteolytic subunit [Saccharum
officinarum]
gi|118614516|ref|YP_899432.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|260677443|ref|YP_003208211.1| clp protease proteolytic subunit [Coix lacryma-jobi]
gi|68052134|sp|Q6ENT9|CLPP_SACOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|75291219|sp|Q6L377|CLPP_SACHY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125863811|sp|A1E9U9|CLPP_SORBI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48478696|gb|AAT44716.1| ATP-dependent Clp protease subunit [Saccharum hybrid cultivar
SP80-3280]
gi|49659536|dbj|BAD27317.1| ATP-dependent protease [Saccharum hybrid cultivar NCo 310]
gi|118201150|gb|ABK79520.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|209361381|gb|ACI43296.1| clp protease proteolytic subunit [Coix lacryma-jobi]
Length = 216
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|259909252|ref|YP_002649608.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964874|emb|CAX56396.1| Putative ATP-dependent Clp protease proteolytic subunit [Erwinia
pyrifoliae Ep1/96]
gi|283479304|emb|CAY75220.1| putative ATP-dependent Clp protease,proteolytic subunit ClpP2
[Erwinia pyrifoliae DSM 12163]
Length = 198
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
++LL+ R V ++G+I +A + AQLL L+ E + I L+INS GG V AG I+D +
Sbjct: 23 NKLLQSRSVIISGEINQALAEKVTAQLLILQ-EMGDEPIKLFINSQGGHVEAGDTIHDMI 81
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+F+KP + G AS G + A +K R+ LPN R ++HQP GG G+ SDIE A+
Sbjct: 82 KFVKPKVLVIGTGWVASAGITIFLAADKENRYTLPNTRFMIHQPLGGVRGKVSDIEIEAK 141
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ + R+N++ K G+ E+VEK D ++ MS +A D+G+ V+ +++
Sbjct: 142 ELLRARERINQLISKATGQPLEKVEKDTDSNYWMSPEQAIDYGIATHVISHWNELK 197
>gi|323455402|gb|EGB11270.1| hypothetical protein AURANDRAFT_21676 [Aureococcus anophagefferens]
Length = 221
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 75/183 (40%), Positives = 110/183 (60%), Gaps = 9/183 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RIV++ + + LI A+LL+L E+P K ++LYINSPG G
Sbjct: 21 DLASLLLHNRIVYLGMPMVSAVTELIVAELLYLNYESPTKPVTLYINSPGTVNSQGQSVG 80
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
T AI D M++IKPP+ T C+GQA ++LL+ GEKG RF LPNA I+LHQP
Sbjct: 81 FETEAFAIADCMKYIKPPVQTICVGQAFGAAAMLLAQGEKGKRFCLPNASIMLHQPRSQA 140
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQASDI A++++ ++ E+ + CG++ +EV R + EA ++G++DKV
Sbjct: 141 RGQASDIAIRAREVMSNRKVSCELMARACGRSVDEVMADASRTKYLQPDEAVEYGLIDKV 200
Query: 205 LMS 207
L +
Sbjct: 201 LHN 203
>gi|290790797|gb|ADD63054.1| clp protease proteolytic subunit [Potamophila parviflora]
Length = 216
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I +INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFFFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|288960164|ref|YP_003450504.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
gi|288912472|dbj|BAI73960.1| ATP-dependent Clp protease, protease subunit [Azospirillum sp.
B510]
Length = 208
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/174 (39%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R V + GQI+ +A ++ AQLL L E+ ++++ +NSPGG V AG I+D ++F
Sbjct: 36 LFKARTVLIFGQIDMKLAQVVSAQLLALAHESDD-DVTVVVNSPGGHVEAGDTIHDMIRF 94
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G + A K RF LPN R L+HQP GG G+A+DI A++I
Sbjct: 95 IKPRVKMLGTGWVASAGCHIYLAANKEDRFCLPNTRFLIHQPLGGTGGRATDIAIEAKEI 154
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ RLN+I + G+ E+V K DR++ M A EA D+G+V ++ +++
Sbjct: 155 IRMRERLNKIIARETGQPLEKVAKDTDRNYWMLADEAKDYGIVSHIINRMDELK 208
>gi|261339094|ref|ZP_05966952.1| hypothetical protein ENTCAN_05307 [Enterobacter cancerogenus ATCC
35316]
gi|288318930|gb|EFC57868.1| Clp protease [Enterobacter cancerogenus ATCC 35316]
Length = 200
Score = 149 bits (376), Expect = 3e-34, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LL+ R + ++G+I +A + Q++ L++ + I LYINS GG V AG I+D ++
Sbjct: 25 KLLESRSIVISGEINQELAQKVITQMILLQSVSND-PIKLYINSQGGHVEAGDTIHDFIK 83
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+P + G AS G + A +K R++LPN R ++HQP GG GQA+DIE A++
Sbjct: 84 FIRPEVHVIGTGWVASAGITIFLAAKKEHRYSLPNTRFMIHQPLGGVRGQATDIEIEARE 143
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+++ R+N++ G+ E+V+K DR+ MS +EA D+G+V K++ +++
Sbjct: 144 IIRMLDRVNKLIADATGQPLEKVKKDTDRNFWMSPAEALDYGIVGKMITHYDELK 198
>gi|329114091|ref|ZP_08242855.1| ATP-dependent Clp protease proteolytic subunit 2 [Acetobacter
pomorum DM001]
gi|326696630|gb|EGE48307.1| ATP-dependent Clp protease proteolytic subunit 2 [Acetobacter
pomorum DM001]
Length = 226
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L K+R V + G I+D +A + +LL L E+ Q I +Y+NSPGG V +G I+D ++
Sbjct: 51 KLFKQRKVLIFGGIDDKIARDVTGRLLALAGESDQ-PIDVYVNSPGGHVESGDTIHDMIR 109
Query: 98 FIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
F+ PI+ G AS G+L+ +AG K RF LPN R LLHQP GG G A+DI+ A
Sbjct: 110 FVDSIAPINMIGTGWVASAGALIFAAGHKERRFCLPNTRFLLHQPMGGVRGPATDIDIEA 169
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++I+K++ RLN I+ K G +YE+V K DR++ MSA EA D+G+V K++ D+
Sbjct: 170 REIIKMRERLNRIFAKETGHSYEKVAKDTDRNYWMSAKEAIDYGLVTKIISKLSDL 225
>gi|258543192|ref|YP_003188625.1| ATP-dependent Clp protease proteolytic subunit [Acetobacter
pasteurianus IFO 3283-01]
gi|256634270|dbj|BAI00246.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01]
gi|256637330|dbj|BAI03299.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-03]
gi|256640382|dbj|BAI06344.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-07]
gi|256643439|dbj|BAI09394.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-22]
gi|256646494|dbj|BAI12442.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-26]
gi|256649547|dbj|BAI15488.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-32]
gi|256652533|dbj|BAI18467.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655591|dbj|BAI21518.1| Clp protease proteolytic subunit ClpP [Acetobacter pasteurianus IFO
3283-12]
Length = 226
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 77/176 (43%), Positives = 113/176 (64%), Gaps = 3/176 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L K+R V + G I+D +A + +LL L E+ Q I +Y+NSPGG V +G I+D ++
Sbjct: 51 KLFKQRKVLIFGGIDDKIARDVTGRLLALAGESDQ-PIDVYVNSPGGHVESGDTIHDMIR 109
Query: 98 FIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
F+ PI+ G AS G+L+ +AG K RF LPN R LLHQP GG G A+DI+ A
Sbjct: 110 FVDSIAPINMIGTGWVASAGALIFAAGHKDRRFCLPNTRFLLHQPMGGVRGPATDIDIEA 169
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++I+K++ RLN I+ K G +YE+V K DR++ MSA EA D+G+V K++ D+
Sbjct: 170 REIIKMRERLNRIFAKETGHSYEKVAKDTDRNYWMSAKEAIDYGLVTKIISKLSDL 225
>gi|255961406|ref|YP_003097599.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
gi|255040283|gb|ACT99943.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
Length = 216
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFFLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|162450511|ref|YP_001612878.1| endopeptidase Clp [Sorangium cellulosum 'So ce 56']
gi|161161093|emb|CAN92398.1| Endopeptidase Clp [Sorangium cellulosum 'So ce 56']
Length = 205
Score = 149 bits (375), Expect = 3e-34, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 108/177 (61%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ S LL+ R V + G+I +A AQLL L +++ +K I + I+SPGG V +G I+D
Sbjct: 29 VQSSLLRSRTVLIFGEITSELAQATTAQLLALASDDGEKPIRILIHSPGGHVESGDTIHD 88
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++FI+P + G AS G+L+ A + RFALPN R LLHQP GG G ASDIE
Sbjct: 89 VIRFIRPEVKVIGTGWVASAGALIFVAARRENRFALPNTRFLLHQPLGGVRGPASDIEIE 148
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A I+ + RLN I+ + G+ ++ + +R+ M+A EA ++G+V +++ S ++I
Sbjct: 149 AAQIMAARERLNRIFAEATGQAPAKIAQETERNLWMTAREAKEYGLVHRIVESALEI 205
>gi|118430326|ref|YP_874761.1| clp protease proteolytic subunit [Agrostis stolonifera]
gi|125863779|sp|A1EA33|CLPP_AGRST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201235|gb|ABK79604.1| clp protease proteolytic subunit [Agrostis stolonifera]
Length = 216
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 69/199 (34%), Positives = 113/199 (56%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + ++Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITKVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA +G+VD V +D
Sbjct: 181 ADEAKAYGLVDIVGDEMVD 199
>gi|123966707|ref|YP_001011788.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
str. MIT 9515]
gi|123201073|gb|ABM72681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 220
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE ++P K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPPI T C+GQA +++LS+G KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++K K+ + EI +N GK+ E++ K DR ++ EA D+GV+
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKSIEDLSKDSDRMSYLNPQEALDYGVI 206
Query: 202 DKVLMSRIDIEEK 214
D++L S+ D+ K
Sbjct: 207 DRILTSQKDLPNK 219
>gi|118430411|ref|YP_874677.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
gi|126302533|sp|P48883|CLPP_HORVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201065|gb|ABK79436.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|307946394|ref|ZP_07661729.1| Clp protease [Roseibium sp. TrichSKD4]
gi|307770058|gb|EFO29284.1| Clp protease [Roseibium sp. TrichSKD4]
Length = 210
Score = 149 bits (375), Expect = 4e-34, Method: Composition-based stats.
Identities = 69/173 (39%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L + R V +TG I +A +C++LL L A+ I++ ++SPGG V +G I+DT++F
Sbjct: 38 LFEARTVLITGPITQELARDVCSRLLAL-AQVSNDPITVIVSSPGGHVESGDMIHDTIKF 96
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ P + MG AS G+L+ + K R+ N R LLHQPSGG G A+DIE A++I
Sbjct: 97 VSPEVRILGMGWVASAGALIYVSVPKEQRYCTQNTRFLLHQPSGGAGGMATDIEIQAKEI 156
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K++ RLN+I+ G+ E +EK DRD+ MS E ++G+V KV+ + +I
Sbjct: 157 IKMRDRLNQIFADATGQPIERIEKDTDRDYWMSPEEGIEYGLVGKVVTNASEI 209
>gi|253729580|ref|YP_003029763.1| ClpP [Bambusa oldhamii]
gi|246367090|gb|ACS94701.1| ClpP [Bambusa oldhamii]
gi|307697231|gb|ADN86070.1| clp protease proteolytic subunit [Chasmanthium latifolium]
Length = 216
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|292487469|ref|YP_003530341.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP2
[Erwinia amylovora CFBP1430]
gi|292898711|ref|YP_003538080.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291198559|emb|CBJ45667.1| ATP-dependent clp protease proteolytic subunit [Erwinia amylovora
ATCC 49946]
gi|291552888|emb|CBA19933.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP2
[Erwinia amylovora CFBP1430]
gi|312171574|emb|CBX79832.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP2
[Erwinia amylovora ATCC BAA-2158]
Length = 198
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
++LL+ R V ++G+I +A + AQLL L+ E + I L+INS GG V AG I+D +
Sbjct: 23 NKLLQSRSVIISGEINQALAEKVTAQLLVLQ-EMGDEPIKLFINSQGGHVEAGDTIHDMI 81
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+F+KP + G AS G + A +K R+ LPN R ++HQP GG G+ SDIE A+
Sbjct: 82 KFVKPKVLVIGTGWVASAGITIFLAADKENRYTLPNTRFMIHQPLGGVRGKVSDIEIEAK 141
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ + R+N++ K G+ E+VEK D ++ MS +A D+G+ V+ +++
Sbjct: 142 ELLRARERINQLISKATGQPLEKVEKDTDSNYWMSPEQAIDYGIATHVISQWDELK 197
>gi|145343664|ref|XP_001416434.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576659|gb|ABO94727.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 251
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 72/181 (39%), Positives = 106/181 (58%), Gaps = 8/181 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV-------- 85
D+ S + KERIV++ + + LI A+LL+L+ E+ +K I LYINS G
Sbjct: 70 DLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSKDGQKYGY 129
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYDT+Q++ PP+ T +G A ++LL+AG +G R ALP+A I+L QP F
Sbjct: 130 DTEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLAAGSRGNRAALPSASIMLKQPLSAFR 189
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQAS++E Q++ KR++ EI K GK VE ++R +EA +G++DKVL
Sbjct: 190 GQASELEIQRQEMRNTKRQMLEILAKTTGKDIATVESDINRPLYFDPTEAVKYGLIDKVL 249
Query: 206 M 206
Sbjct: 250 S 250
>gi|83858741|ref|ZP_00952263.1| hypothetical protein OA2633_04541 [Oceanicaulis alexandrii
HTCC2633]
gi|83853564|gb|EAP91416.1| hypothetical protein OA2633_04541 [Oceanicaulis alexandrii
HTCC2633]
Length = 206
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L + R + +TG I D A +CAQL L A++ I + I+SPGG V +G I+DTM+F
Sbjct: 33 LFESRTILITGGISDKTAREVCAQLFALAAKSDD-PILMVISSPGGHVESGDMIHDTMKF 91
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ K R+ALPN R LLHQPSGG G ASDIE +++
Sbjct: 92 IKPRVIVLGSGWVASAGALIYVGANKEDRYALPNTRFLLHQPSGGAGGMASDIEIQVREM 151
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+++RLN+I+ GK+ +++EK DRD +SA +A ++G+ K++ S+ +I+
Sbjct: 152 RSMRQRLNQIFADATGKSLDQIEKDTDRDFWLSAKDAVEYGLCGKIITSQDEIK 205
>gi|159106888|ref|YP_001531306.1| clp protease proteolytic subunit [Lolium perenne]
gi|158934422|emb|CAO86000.1| clp protease proteolytic subunit [Lolium perenne]
Length = 216
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|153012188|ref|YP_001381704.1| clp protease proteolytic subunit [Medicago truncatula]
Length = 193
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 66/192 (34%), Positives = 113/192 (58%), Gaps = 4/192 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V Q + D+Y+RL +ER++F+ ++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSLEDKT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V +GMAI+D MQ ++ + T C+G AASMGSLLL GE R A P+
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
A I + + GQ + A++++K+++ + IY + GK ++ + ++RD MSA
Sbjct: 121 AMI-HQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMSA 179
Query: 193 SEACDWGVVDKV 204
EA G+VD V
Sbjct: 180 EEAEAHGIVDTV 191
>gi|14017596|ref|NP_114282.1| ATP-dependent Clp protease proteolytic subunit [Triticum aestivum]
gi|17374148|sp|P24064|CLPP_WHEAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13928229|dbj|BAB47058.1| ATP-dependent protease proteolytic subunit [Triticum aestivum]
Length = 216
Score = 148 bits (374), Expect = 4e-34, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYAVRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|33861869|ref|NP_893430.1| ATP-dependent Clp protease-like protein [Prochlorococcus marinus
subsp. pastoris str. CCMP1986]
gi|33640237|emb|CAE19772.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 220
Score = 148 bits (374), Expect = 5e-34, Method: Composition-based stats.
Identities = 79/193 (40%), Positives = 115/193 (59%), Gaps = 19/193 (9%)
Query: 41 KERIVFVTGQI---ED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTA-- 88
KERIV++ + +D + LI AQLL+LE ++P K I YINS G
Sbjct: 27 KERIVYLGLPLFSDDDAKRQLGMDVTELIIAQLLYLEFDDPDKPIYFYINSTGTSWYTGD 86
Query: 89 -------GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
AI DT+ +IKPPI T C+GQA +++LS+G KG R ALP+A I+LHQP
Sbjct: 87 AVGFETEAFAICDTINYIKPPIHTICIGQAMGTAAVILSSGTKGHRAALPHASIVLHQPI 146
Query: 142 GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
G GQA+DI+ A++++K K+ + EI +N GK+ EE+ K DR ++ EA D+GV+
Sbjct: 147 SGARGQATDIQIRAEEVLKNKKSMLEILSRNTGKSIEELSKDSDRMSYLNPQEALDYGVI 206
Query: 202 DKVLMSRIDIEEK 214
D++L S+ D+
Sbjct: 207 DRILTSQKDLPNN 219
>gi|310766844|gb|ADP11794.1| ATP-dependent clp protease proteolytic subunit [Erwinia sp. Ejp617]
Length = 198
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 65/176 (36%), Positives = 107/176 (60%), Gaps = 1/176 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
++LL+ R V ++G+I +A + AQLL L+ E + I L+INS GG V AG I+D +
Sbjct: 23 NKLLQSRSVIISGEINQALAEKVTAQLLILQ-EMGDEPIKLFINSQGGHVEAGDTIHDMI 81
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+F+KP + G AS G + A +K R+ LPN R ++HQP GG G+ SDIE A+
Sbjct: 82 KFVKPKVLVIGTGWVASAGITIFLAADKENRYTLPNTRFMIHQPLGGVRGKVSDIEIEAK 141
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ + R+N++ K G+ E+VEK D ++ MS +A D+G+ V+ +++
Sbjct: 142 ELLRARERINQLISKATGQPLEKVEKDTDSNYWMSPEQAIDYGIATHVISQWNELK 197
>gi|139387476|ref|YP_001122831.1| clp protease proteolytic subunit [Phaseolus vulgaris]
gi|160380561|sp|A4GGD0|CLPP_PHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112030998|gb|ABH88110.1| clp protease proteolytic subunit [Phaseolus vulgaris]
Length = 195
Score = 148 bits (373), Expect = 5e-34, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 115/193 (59%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTN--RGERSYDI-YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V +T R DI +RL +ER++F+ ++ ++ + + +++L E
Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDILINRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKE 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V G+A+YDTMQF++P + T C+G AASMGS LL+ G R A P
Sbjct: 61 NKDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+A I S + QA + A++++K++ + +YV+ GK+ + + ++RD MS
Sbjct: 121 HAMI-HQPASSFYEAQAGEFILEAEELLKMRETITRVYVQRTGKSLWVISEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|156598137|gb|ABU85333.1| clp protease proteolytic subunit [Elaeis oleifera]
Length = 195
Score = 148 bits (373), Expect = 6e-34, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P V ++ E + D+ +RL +E ++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGIPKVPFRSPGEEDAIWVDV-NRLHREGLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+++ L+INSPGG V G+AIYDTMQF+ P + T CMG AASMGS +L GE R ALP+
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 119
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F QA + A++++K++ L ++YV+ G V + ++RD MS
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 ATEAQVHGIVDLV 192
>gi|209519436|ref|ZP_03268232.1| Endopeptidase Clp [Burkholderia sp. H160]
gi|209500103|gb|EEA00163.1| Endopeptidase Clp [Burkholderia sp. H160]
Length = 215
Score = 147 bits (372), Expect = 7e-34, Method: Composition-based stats.
Identities = 75/180 (41%), Positives = 113/180 (62%), Gaps = 3/180 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ +RLL ER V V G I+D +A +CA+LL L +E+ I ++INSPGG V +G I+D
Sbjct: 36 LENRLLSERRVLVFGTIDDKLARDVCARLLTLASESSN-PIDVFINSPGGHVESGDTIHD 94
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++FI P+ G AS G+ + K R+ALPN R +LHQP GG GQA+DI
Sbjct: 95 MVRFIDSTAPVRMVGTGWVASAGATIYLGARKEHRYALPNTRFMLHQPLGGAQGQATDIA 154
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A++IVKI+ R+N + + G+ YE+V + DR++ M+A EA ++GVV +++ S D+
Sbjct: 155 IEAREIVKIRERINRLIAEATGQQYEKVAEDTDRNYWMTAGEALEYGVVGRLIQSLADLR 214
>gi|296117414|ref|ZP_06836002.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
gi|295976016|gb|EFG82806.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
hansenii ATCC 23769]
Length = 224
Score = 147 bits (372), Expect = 8e-34, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 113/179 (63%), Gaps = 3/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ SRL +R V V G I D +A + +LL L + + I +Y+NSPGG V +G I+D
Sbjct: 46 LESRLFDQRKVLVFGPINDKIARDVTGRLLALAGASDK-PIDVYVNSPGGHVESGDTIHD 104
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++F+ PI+ G AS G+L+ +AG + R+ LPN R LLHQP GG G A+DI+
Sbjct: 105 MIRFVDSVAPINMIGTGWVASAGALIYAAGNRERRYCLPNTRFLLHQPMGGVRGPATDID 164
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++I+K++ RLN ++ + G++YE+V K DR++ MSA EA ++G+V +V+ DI
Sbjct: 165 IEAREIIKMRERLNRLFARETGQSYEKVCKDTDRNYWMSAPEAIEYGLVTRVIEKISDI 223
>gi|218192668|gb|EEC75095.1| hypothetical protein OsI_11253 [Oryza sativa Indica Group]
Length = 464
Score = 147 bits (372), Expect = 9e-34, Method: Composition-based stats.
Identities = 71/155 (45%), Positives = 103/155 (66%), Gaps = 4/155 (2%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
I D + A L N ++I +Y+NSPGG VTAGMAI+DTM+ I+P +ST C+G
Sbjct: 300 INDQRVLDVVACALC----NLTEDIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGL 355
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV 170
AASMG+ LLSAG KG R++LPN+RI++HQP GG GQ +D+E A +++ K LN
Sbjct: 356 AASMGAFLLSAGTKGKRYSLPNSRIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLA 415
Query: 171 KNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ G+ +++ DRD+ MSA EA ++G++D V+
Sbjct: 416 YHTGQPLDKINVDTDRDYFMSAKEAKEYGLIDGVI 450
>gi|183240722|gb|ACC61147.1| ClpP [Agrostemma githago]
Length = 172
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 68/169 (40%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+RL +ER++F+ +++ ++ + +++L E+ K++ L+INSPGG V G+AIYDTM
Sbjct: 1 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTM 60
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASDIERHA 155
QF++P + T CMG AASMGS +L GE R A P+AR+++HQP+ F Q + A
Sbjct: 61 QFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEA 120
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++++K++ L +YV+ GK V + ++RD MSA+EA G+VD V
Sbjct: 121 EELLKLRETLTRVYVQRTGKPVWVVSEDMERDVFMSAAEAQAHGIVDLV 169
>gi|162146853|ref|YP_001601314.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|209544637|ref|YP_002276866.1| ATP-dependent Clp protease proteolytic subunit [Gluconacetobacter
diazotrophicus PAl 5]
gi|161785430|emb|CAP54979.1| ATP-dependent Clp protease proteolytic subunit 2 [Gluconacetobacter
diazotrophicus PAl 5]
gi|209532314|gb|ACI52251.1| Endopeptidase Clp [Gluconacetobacter diazotrophicus PAl 5]
Length = 224
Score = 147 bits (371), Expect = 9e-34, Method: Composition-based stats.
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ SRL +R V V G I D +A + +LL L A I +YINSPGG V +G I+D
Sbjct: 46 LESRLFDQRKVLVFGAINDKLARDVTGRLLAL-AGASDHPIDVYINSPGGHVESGDTIHD 104
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++F+ P++ G AS G+L+ +AG RF LPN R LLHQP GG G A+DI+
Sbjct: 105 MIRFVDSVAPVNVIGTGWVASAGALIFAAGNAQRRFCLPNTRFLLHQPMGGVRGPATDID 164
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++IVK++ RLN ++ + G++YE+V + DR++ MSA EA +G+V +V+ + DI
Sbjct: 165 IEAREIVKMRERLNRLFARETGQSYEKVCRDTDRNYWMSADEAIAYGLVTRVINTLSDI 223
>gi|77553345|gb|ABA96141.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
Length = 216
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEVTWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMVSFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K+ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVHEMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A +A +G+VD V
Sbjct: 181 ADKAKAYGLVDIV 193
>gi|261415968|ref|YP_003249651.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|261372424|gb|ACX75169.1| Endopeptidase Clp [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302327177|gb|ADL26378.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 193
Score = 147 bits (371), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/168 (44%), Positives = 114/168 (67%), Gaps = 3/168 (1%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L +R +F+ G ++D A I QLL+L++ N + +I +INSPGGV+++G+AIYD M
Sbjct: 23 LASKRRIFLWGGVDDESAERIVKQLLYLDSLNHE-DIIFFINSPGGVISSGLAIYDCMNA 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG--FSGQASDIERHAQ 156
I+ + T C GQAASMG++LL+AG KG R A PNARI++HQP ASDI+ A+
Sbjct: 82 IQSDVVTVCCGQAASMGAVLLTAGAKGKRCAWPNARIMIHQPLIHGEIVAPASDIQIQAE 141
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++++I+ +I + G T E++++ +RD+ MSA EA ++G+VDKV
Sbjct: 142 EMLRIRGITGKILAETSGHTIEQIDRDTERDNFMSAEEARNYGLVDKV 189
>gi|227452690|gb|ACP34131.1| ATP-dependent protease subunit [Larix gmelinii]
Length = 196
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 66/190 (34%), Positives = 112/190 (58%), Gaps = 4/190 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER++F+ I +A + +++L AE+
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ ++N PGG V G+ I+D MQ I P + T CMG AASMGS +L GE R ALP+
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ + A+D ++ + ++ + + Y++ G E +++ L+RD MS
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPGEVIQRGLNRDVFMS 180
Query: 192 ASEACDWGVV 201
A+EA +G+V
Sbjct: 181 ATEAQAYGIV 190
>gi|168033939|ref|XP_001769471.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679182|gb|EDQ65632.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 237
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/211 (35%), Positives = 113/211 (53%), Gaps = 11/211 (5%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSY---DIYSRLLKERIVFVTGQIEDHMATLICAQ 62
K+ G+V MV+ R D+ S L K RIVF+ + L A+
Sbjct: 7 SLKRTQSCGRSGVVTMVIPFQRGDARQQPPPDLPSYLFKNRIVFLAMSLVPAFTELFMAE 66
Query: 63 LLFLEAENPQKEISLYINSPG--------GVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
LL+L+ ++P++ I +YINS G G T AIYDTM+++KPPI T C+G A
Sbjct: 67 LLYLQYDDPEESIYMYINSTGTTKDGEKLGYETEAFAIYDTMRYMKPPIFTLCVGNAWGE 126
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
+LLL+AG KG R LP+A I+L QP F GQA+DI+ +++ +K ++ ++ G
Sbjct: 127 AALLLAAGSKGNRACLPSATIMLKQPIAQFRGQATDIDIARKEVRNVKEEFVKLLSRHTG 186
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ E++ + R A D+G++DKVL
Sbjct: 187 QPPEKITGDIRRPKYFKPDGAVDYGIIDKVL 217
>gi|297745678|emb|CBI40932.3| unnamed protein product [Vitis vinifera]
Length = 282
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 113/189 (59%), Gaps = 8/189 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ ++ +K I LYINS G G
Sbjct: 82 DLPSYLFKNRIVYLGMSLVPSVTELILAEFLYLQYDDAEKPIYLYINSTGTTKGGEKLGY 141
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M ++K PI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 142 ETEAFAIYDVMGYVKSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQPIARFQ 201
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+DI+ +++ +K L ++Y K+ GK+ EE+E + R S SEA ++G++DKVL
Sbjct: 202 GQATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEAVEYGIIDKVL 261
Query: 206 MSRIDIEEK 214
+ E++
Sbjct: 262 YNERSSEDR 270
>gi|183240726|gb|ACC61150.1| ClpP [Atocion rupestre]
gi|183240730|gb|ACC61153.1| ClpP [Viscaria vulgaris]
gi|183240734|gb|ACC61156.1| ClpP [Petrocoptis pyrenaica]
Length = 172
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 68/169 (40%), Positives = 110/169 (65%), Gaps = 1/169 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+RL +ER++F+ +++ ++ + +++L E+ K++ L+INSPGG V G+AIYDTM
Sbjct: 1 NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTM 60
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASDIERHA 155
QF++P + T CMG AASMGS +L GE R A P+AR+++HQP+ F Q + A
Sbjct: 61 QFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEA 120
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++++K++ L +YV+ GK V + ++RD MSA+EA G+VD V
Sbjct: 121 EELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMSAAEAQAHGIVDLV 169
>gi|118591096|ref|ZP_01548495.1| endopeptidase Clp, subunit 3 protein [Stappia aggregata IAM 12614]
gi|118436172|gb|EAV42814.1| endopeptidase Clp, subunit 3 protein [Stappia aggregata IAM 12614]
Length = 204
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/173 (41%), Positives = 107/173 (61%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L + R V +TG + MA +CA+LL L A+ I++ ++SPGG V +G I+DT++F
Sbjct: 32 LFEARTVLITGPVTQEMARDVCARLLAL-AQVSNDPITVIVSSPGGHVESGDMIHDTIKF 90
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I P + MG AS G+L+ + K RF PN R LLHQPSGG G A+DIE A++I
Sbjct: 91 IAPEVRILGMGWVASAGALIYVSVPKDKRFCTPNTRFLLHQPSGGAGGMATDIEIQAREI 150
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K++ RLN+I+ G+ +EK DRD+ MS E D+G+V K++ + ++
Sbjct: 151 IKMRDRLNKIFADATGQPIARIEKDTDRDYWMSPEEGIDYGLVGKIVTTVDEL 203
>gi|88770682|gb|ABD51944.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rhodomonas
salina]
Length = 262
Score = 147 bits (370), Expect = 1e-33, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 105/184 (57%), Gaps = 9/184 (4%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMA 91
RIV++ + + LI A+ L+L+ EN +K + +Y+NS G T A
Sbjct: 72 NNRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVFMYLNSTGTSNPDGSSAGFETEAFA 131
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I DTM ++KPP+ T C+GQA +LLS+GE R ALPNA I++HQP+ GQASDI
Sbjct: 132 IADTMNYVKPPVHTICVGQAFGTCVMLLSSGEPTHRAALPNATIMIHQPTARAKGQASDI 191
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++++ +++ EI + G+ E+V K R ++ +EA ++G++DK+L S +
Sbjct: 192 AIKAREVLYNRKQCFEIIAETSGQPLEKVMKDASRTKYLTPAEAVEYGIIDKILESTKSV 251
Query: 212 EEKS 215
+
Sbjct: 252 SPTN 255
>gi|91216523|ref|ZP_01253489.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Psychroflexus
torquis ATCC 700755]
gi|91185317|gb|EAS71694.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Psychroflexus
torquis ATCC 700755]
Length = 182
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/169 (50%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ L+ER VF+ GQ++ A I +L++L+ E+ EI YINSPGG VT G AIYDTM+
Sbjct: 15 KFLEERKVFLNGQVDGKSAKHIIDRLMYLDMESND-EIQFYINSPGGYVTDGFAIYDTMK 73
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+K P+ST C G AASMGS+L+S GEKG RF P+A+I++HQP GG GQAS+IE A++
Sbjct: 74 GLKSPVSTICCGLAASMGSILMSGGEKGKRFIQPHAKIMIHQPMGGAQGQASNIEIQAKE 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I+KIK +I NCG+ ++V K RDH M A E+ D+G+VD +L
Sbjct: 134 ILKIKELSAKILADNCGQDLDKVMKDFKRDHWMDAQESSDYGIVDGILS 182
>gi|11467216|ref|NP_043048.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|1168978|sp|P26567|CLPP_MAIZE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|902246|emb|CAA60310.1| clpP [Zea mays]
Length = 216
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INS GG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSLGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|154250462|ref|YP_001411286.1| endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
gi|154154412|gb|ABS61629.1| Endopeptidase Clp [Parvibaculum lavamentivorans DS-1]
Length = 199
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/173 (38%), Positives = 110/173 (63%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R V VTG+I D A + +LL + E+ I++ ++SPGG V +G I+D +++
Sbjct: 27 LFKSRTVLVTGEINDRQARAVSERLLAMAGESDD-PITVIVSSPGGHVESGDMIHDMIKY 85
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ A ++ R+ LPN R LLH+P GG G A++I+ A+++
Sbjct: 86 IKPRVRVLGTGWVASAGALIYVAADREDRYCLPNTRFLLHEPRGGVGGSATEIDIQAREV 145
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K++ RLN+I+ + G+ E++ K +RDH M+A EA ++GVV K++ S +I
Sbjct: 146 LKMRERLNKIFAEATGQPIEKIVKDTNRDHWMNAEEAKEYGVVGKIIRSAAEI 198
>gi|148530030|gb|ABQ82222.1| ATP-dependent Clp protease proteolytic subunit 2 [Gluconacetobacter
diazotrophicus PAl 5]
Length = 189
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/179 (41%), Positives = 110/179 (61%), Gaps = 3/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ SRL +R V V G I D +A + +LL L A I +YINSPGG V +G I+D
Sbjct: 12 LESRLFDQRKVLVFGAINDKLARDVTGRLLAL-AGASDHPIDVYINSPGGHVESGDTIHD 70
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++F+ P+ G AS G+L+ +AG RF LPN R LLHQP GG G A++I+
Sbjct: 71 MIRFVDSVAPVDVIGPGWVASAGALIFAAGNAQRRFCLPNTRFLLHQPMGGVRGPATEID 130
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++IVK++ RLN ++ + G++YE+V + DR++ MSA EA +G+V +V+ + DI
Sbjct: 131 IEAREIVKMRERLNRLFARETGQSYEKVCRDTDRNYWMSADEAIAYGLVTRVINTLSDI 189
>gi|115531963|ref|YP_784118.1| clp protease proteolytic subunit [Pelargonium x hortorum]
gi|115531983|ref|YP_784138.1| clp protease proteolytic subunit [Pelargonium x hortorum]
gi|122164258|sp|Q06FP3|CLPP_PELHO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112382117|gb|ABI17310.1| clp protease proteolytic subunit [Pelargonium x hortorum]
gi|112382137|gb|ABI17330.1| clp protease proteolytic subunit [Pelargonium x hortorum]
Length = 219
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 5/201 (2%)
Query: 20 PMVVEQ--TNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
P VE+ + E++ D+Y+RL ++R +F+ +E+ +A I ++ L E+P
Sbjct: 19 PDSVEEELDSMEEKATWVDLYNRLYRQRWLFLGKDLEEEVANNIVGLMIHLNIEDPFWTQ 78
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+LYIN GG++ G+A+YDT+ F++P + T C+G AASM S++L G R A PNAR+
Sbjct: 79 TLYINCLGGLIIPGLALYDTIGFVEPDVKTICLGIAASMASVVLVGGTVTERCAFPNARV 138
Query: 136 LLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++HQP F + SD+ ++++ + +IY+ K + L+RD MSA+E
Sbjct: 139 MIHQPRAKEFDDRFSDLNLEGHLFLQLRNCVTQIYIHRTNKPAWVIIADLERDTFMSATE 198
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A +G++D V + EE S
Sbjct: 199 ARTYGIIDGVYAFEEEYEEWS 219
>gi|328947527|ref|YP_004364864.1| ATP-dependent Clp protease proteolytic subunit [Treponema
succinifaciens DSM 2489]
gi|328447851|gb|AEB13567.1| ATP-dependent Clp protease proteolytic subunit [Treponema
succinifaciens DSM 2489]
Length = 216
Score = 146 bits (369), Expect = 2e-33, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ LK R + ++G+I + +A I QLL LEA + K I +YI+SPGG V AG AI+DT++
Sbjct: 43 KFLKTRQILLSGEICEELAEKIIRQLLILEA-DNDKPIYIYIDSPGGDVYAGFAIFDTIR 101
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI P+ G AS +L+L + K R LP++ L+HQPS G G A+DIE HA +
Sbjct: 102 FINAPVYIIGTGLIASAAALILLSVPKERRLGLPHSSYLIHQPSSGMKGVATDIEIHAAE 161
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ K + ++NEI + G + E+V K DRD+ +++ EA +G++ KV+ +R D+
Sbjct: 162 LAKTRTKINEIISEQTGTSLEKVSKDTDRDYWLNSEEAVQYGLICKVITNRKDL 215
>gi|46371973|gb|AAS90621.1| putative ATP-dependent Clp protease (proteolytic subunit)
[uncultured soil bacterium]
Length = 254
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 66/183 (36%), Positives = 108/183 (59%), Gaps = 2/183 (1%)
Query: 30 ERSYDIYSRL-LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
ER I RL K R V + G+I +A C +L+ L AE +++ I+SPGG V +
Sbjct: 72 ERLDAITDRLAFKSRFVMLFGEINHAVARATCTRLIAL-AEESDGPVTVLISSPGGHVES 130
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
G AI+D ++F++ P++T G AS G+ + A K R LPN R ++HQP GG G A
Sbjct: 131 GDAIHDIIRFVRAPVTTVGTGWVASAGTHVFLAAPKERRVCLPNTRFMIHQPGGGAGGPA 190
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+DI A++I++ + R+ ++ K G++ ++V ++RD MSA EA +G+V KV+ +
Sbjct: 191 TDIAIQAKEILRTRERIAKVISKQTGQSLQKVLADMERDFWMSAEEAIVYGLVSKVIETS 250
Query: 209 IDI 211
++
Sbjct: 251 REL 253
>gi|85544605|pdb|2F6I|A Chain A, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544606|pdb|2F6I|B Chain B, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544607|pdb|2F6I|C Chain C, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544608|pdb|2F6I|D Chain D, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544609|pdb|2F6I|E Chain E, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544610|pdb|2F6I|F Chain F, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
gi|85544611|pdb|2F6I|G Chain G, Crystal Structure Of The Clpp Protease Catalytic Domain
From Plasmodium Falciparum
Length = 215
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I A + +QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 37 FKKRIIYLTDEINKKTADELISQLLYLDNINHN-DIKIYINSPGGSINEGLAILDIFNYI 95
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R +LPN RI++HQP G G DIE ++I+
Sbjct: 96 KSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEIL 155
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L +T E +EK DRD+ M+A EA +G++D+V+ ++
Sbjct: 156 YLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETK 204
>gi|260766931|gb|ACX50407.1| ATP-dependent Clp protease [Eriobotrya japonica]
Length = 305
Score = 146 bits (368), Expect = 2e-33, Method: Composition-based stats.
Identities = 75/189 (39%), Positives = 114/189 (60%), Gaps = 8/189 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ K I LYINS G G
Sbjct: 104 DLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDTKPIYLYINSTGTTKGGEKLGY 163
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M+++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 164 ETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMMKQPIARFQ 223
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+DIE +++ +K L +++ K+ GK+ E++E + R S SEA ++G++DKVL
Sbjct: 224 GQATDIELARREVRNVKDELVKLFAKHVGKSTEQIEADIRRPKYFSPSEAVEYGIIDKVL 283
Query: 206 MSRIDIEEK 214
+ E++
Sbjct: 284 YNERSTEDR 292
>gi|302801676|ref|XP_002982594.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
gi|302823376|ref|XP_002993341.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300138850|gb|EFJ05603.1| hypothetical protein SELMODRAFT_136938 [Selaginella moellendorffii]
gi|300149693|gb|EFJ16347.1| hypothetical protein SELMODRAFT_116719 [Selaginella moellendorffii]
Length = 218
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 76/191 (39%), Positives = 116/191 (60%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L RIVF+ + + LI A+ L+L+ +P+K I +YINS G G
Sbjct: 17 DLPSYLFHNRIVFLGMSLVPAVTELIMAEFLYLQFVDPEKPIYMYINSTGTTKDGEKLGY 76
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T +A+YDTMQ++KPPI T C+G A +LLL+AG KG R ALP+ I+L +P F
Sbjct: 77 ETEALAMYDTMQYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSTTIMLKEPIAQFR 136
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+DI+ +++ +K+ L E+ ++ G+ +++E+ + R S EA D+G++DKVL
Sbjct: 137 GQATDIDIARREVRNLKKDLVELLERHTGQPADKIEEDIRRPKYFSPDEAVDYGLIDKVL 196
Query: 206 MSRIDIEEKSK 216
R + EKSK
Sbjct: 197 --RTEKGEKSK 205
>gi|147800090|emb|CAN70935.1| hypothetical protein VITISV_032484 [Vitis vinifera]
Length = 229
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 65/178 (36%), Positives = 104/178 (58%), Gaps = 13/178 (7%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G D+ + L + RI+F+ I +A + +QL+ L A + +I
Sbjct: 41 PVAPSVM--TPGGP--LDLSTVLFRSRIIFIGQPINSMVAQRVISQLVTLAAIDEDADIL 96
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + +AIYD M +IKP + T C G AAS G+LLL+ GEKGMR+A+PNARI+
Sbjct: 97 MYLNCPGGSTYSVLAIYDCMAWIKPKVGTVCFGVAASQGALLLAGGEKGMRYAMPNARIM 156
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
G D+ R + V+ + +++++Y G+ E+V++ +RD +SASE
Sbjct: 157 ---------GHVEDVRRQVNEAVQSRHKIDKMYAAFTGQPLEQVQQYTERDRFLSASE 205
>gi|332180360|gb|AEE16048.1| ATP-dependent Clp protease proteolytic subunit [Treponema
brennaborense DSM 12168]
Length = 211
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 73/188 (38%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Query: 25 QTNRGERSYD-IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
+ + E + D + ++ LK R + ++G++ +A I QLL LEA + + I ++I+SPG
Sbjct: 24 EKSANENASDALNAKFLKTRQILLSGEVNKPLAEKIVRQLLILEA-DSDEPIRIFIDSPG 82
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G V AG AI+D ++F+ P+ MG AS G+L+L A K R ALPN+ L+HQP G
Sbjct: 83 GDVDAGYAIFDMIRFVNAPVYCIGMGLVASAGALILLAAPKERRIALPNSHYLIHQPLSG 142
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A+DIE HA++I K + ++NE+ GK+ ++V K DRD+ M+A EA +G++
Sbjct: 143 IKGVATDIEIHAREIEKTRAKINELISLETGKSLDQVCKDTDRDYWMNAEEARSYGLIST 202
Query: 204 VLMSRIDI 211
V+ SR ++
Sbjct: 203 VVSSREEL 210
>gi|58039954|ref|YP_191918.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
gi|67460437|sp|Q5FQT4|CLPP2_GLUOX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|58002368|gb|AAW61262.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
oxydans 621H]
Length = 223
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 3/177 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL +R V + G I D +A + +LL L + + I +Y+NSPGG V +G I+D ++
Sbjct: 48 RLFDQRKVLIFGGINDKIARDVTGRLLALAGTSDK-PIDVYVNSPGGHVESGDTIHDMIR 106
Query: 98 FIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
F+ PI+ G AS G+L+ +AG R LPN R LLHQP GG G A+DI+ A
Sbjct: 107 FVDSIAPINMIGTGWVASAGALIYAAGRPERRVCLPNTRFLLHQPMGGVRGPATDIDIEA 166
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++I+K++ RLN I+ K G+TYE+V K DR++ MSA+EA +G+V++++ S +++
Sbjct: 167 REIIKMRERLNRIFAKETGQTYEKVAKDTDRNYWMSANEAIAYGLVNRIIHSATELK 223
>gi|162606046|ref|XP_001713538.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794458|gb|AAK39833.1|AF165818_41 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 254
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 67/182 (36%), Positives = 108/182 (59%), Gaps = 9/182 (4%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + LI A+ L+L+ EN +K + +Y+NS G T AI
Sbjct: 67 NRIVYLGMPLVPAVTELIVAEFLYLQYENSEKPVYMYLNSTGTSNPDGSSAGFETEAFAI 126
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
DTM +IKPP+ T C+GQA ++LLS+GE G R ALPNA I++HQP+ GQASDI
Sbjct: 127 ADTMNYIKPPVHTICVGQAFGTCAMLLSSGEPGQRAALPNATIMIHQPTSRARGQASDIA 186
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A++++ +++ EI + G++ E+V K R +S EA ++G++D++L ++ +
Sbjct: 187 IKAREVLYNRKQCFEILAETSGQSLEKVMKDASRTKYLSPMEAVEYGIIDRILDTQKKSD 246
Query: 213 EK 214
K
Sbjct: 247 GK 248
>gi|219118446|ref|XP_002179995.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408252|gb|EEC48186.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 309
Score = 145 bits (367), Expect = 3e-33, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 107/192 (55%), Gaps = 6/192 (3%)
Query: 20 PMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
P V + + DI + + ++R +F++ I++ A + + +L+L E+P+ IS+
Sbjct: 57 PQVPYMPPGADYAQFIDIEAAMYRDRTLFISTFIDEETANSLISIMLYLRNESPKDPISM 116
Query: 78 YINSPGGVVTAGMAIYDTMQF--IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
Y N PG ++ +A+YD +Q K I T +G A MG+ L SAG KG R A+PN+R
Sbjct: 117 YFNVPGALLRPSLALYDLIQQTKQKCEIETVNLGLCAGMGAFLCSAGTKGKRNAMPNSRF 176
Query: 136 LLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
LL + F GQA+DI +++ K R+ E + G+ E +++ L RD +S+
Sbjct: 177 LLQRTGMDEVFRGQATDIALEVRNVKKWNDRMEEELSQMTGQPLERIQQDLKRDFYLSSD 236
Query: 194 EACDWGVVDKVL 205
EA +G++D+VL
Sbjct: 237 EAVQYGLIDRVL 248
>gi|282896315|ref|ZP_06304337.1| hypothetical protein CRD_01199 [Raphidiopsis brookii D9]
gi|281198811|gb|EFA73690.1| hypothetical protein CRD_01199 [Raphidiopsis brookii D9]
Length = 187
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 69/185 (37%), Positives = 109/185 (58%), Gaps = 14/185 (7%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM---------- 90
+ERI+F+ + ++A + + LL+L++E+ K I LYINS G V AGM
Sbjct: 3 QERILFLNQPLTTNLANSLISSLLYLDSEDSSKPIYLYINSFGDPVMAGMISEMAGMEST 62
Query: 91 ----AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
AIYDT+Q +K I T C+GQA SM +LLLS G KG R +LP+ I L Q G
Sbjct: 63 NACLAIYDTIQHVKSEIVTICLGQAVSMAALLLSCGAKGKRVSLPHCSIALAQFRSATQG 122
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA+DI+ +AQ++++ K + +I+ N G++ E++ +R M+ EA ++G++D VL
Sbjct: 123 QATDIQLNAQEVLRKKSLILDIFSHNTGQSREKIAHDSERIFYMTPPEAREYGLIDHVLE 182
Query: 207 SRIDI 211
+ +
Sbjct: 183 NTKQL 187
>gi|119382774|ref|YP_913830.1| endopeptidase Clp [Paracoccus denitrificans PD1222]
gi|119372541|gb|ABL68134.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paracoccus
denitrificans PD1222]
Length = 211
Score = 145 bits (366), Expect = 3e-33, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 104/173 (60%), Gaps = 1/173 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K R V V G I D +A A LL L AE+ + I++ I+SPGG V +G I+D ++FI
Sbjct: 40 FKSRTVIVAGPITDKLAQRTVAHLLAL-AEDSDEPINMLISSPGGHVESGDMIHDVIKFI 98
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+P + T G AS G+L+ +K R+ LPN R L+HQPSGG G ++D+ A+ +
Sbjct: 99 RPTVRTIGSGWVASAGALIFVGADKENRYCLPNTRFLIHQPSGGIGGTSTDMMIQAEQVR 158
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++ RLN+I+ + G+ E +EK RD ++ EA D+G++ KV+ S +++
Sbjct: 159 LMRDRLNQIFAEATGQPVERIEKDTQRDFWLNTQEALDYGLLGKVIRSVDELK 211
>gi|160331817|ref|XP_001712615.1| clpP1 [Hemiselmis andersenii]
gi|159766064|gb|ABW98290.1| clpP1 [Hemiselmis andersenii]
Length = 257
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 66/179 (36%), Positives = 104/179 (58%), Gaps = 9/179 (5%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + LI A+ L+L+ EN K + +Y+NS G T AI
Sbjct: 68 NRIVYLGMPLVPAVTELIVAEFLYLQYENADKPVFMYLNSTGTSNPDGSSAGFETEAFAI 127
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
DTM +IKPP+ T C+GQA ++LLS+GE G R ALPN+ I++HQP GQASDI
Sbjct: 128 ADTMNYIKPPVHTICVGQALGTCAMLLSSGEPGQRAALPNSTIMVHQPRTQAKGQASDIA 187
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A++++ +++ EI K G++ ++V K R ++ EA ++G++DK+L S +
Sbjct: 188 IKAKEVLYNRKQCFEIIAKTSGQSLQKVMKDASRTKYLTPGEAVEYGIIDKILESNKSL 246
>gi|148261149|ref|YP_001235276.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
cryptum JF-5]
gi|326404550|ref|YP_004284632.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
gi|146402830|gb|ABQ31357.1| ATP-dependent Clp protease proteolytic subunit ClpP [Acidiphilium
cryptum JF-5]
gi|325051412|dbj|BAJ81750.1| ATP-dependent Clp protease proteolytic subunit [Acidiphilium
multivorum AIU301]
Length = 216
Score = 145 bits (366), Expect = 4e-33, Method: Composition-based stats.
Identities = 71/180 (39%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ +RL K+R V + G+I D +A + QLL L + + I +++NSPGG V +G I+D
Sbjct: 36 LENRLFKQRKVLIFGEIHDRIARAVTGQLLALAGASDE-PIDVFVNSPGGHVESGDTIHD 94
Query: 95 TMQFIKP--PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++F+ P+ G AS G+L+ AG K RF LPN R LLHQP GG G A+DI+
Sbjct: 95 VIRFVDATAPVRMIGTGWVASAGALIYLAGHKDRRFCLPNTRFLLHQPMGGVRGPATDID 154
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A++I+K++ R+N I + G+ Y VEK DR++ M A EA +G+V +V+ + D++
Sbjct: 155 IEAREIIKMRERINRIIARETGQDYARVEKDTDRNYWMGAEEAIAYGMVSRVVQTMKDLD 214
>gi|166201954|gb|ABY84429.1| ATP-dependent protease proteolytic subunit [Lychnis flos-cuculi]
Length = 375
Score = 145 bits (365), Expect = 4e-33, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 1/174 (0%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+RL +ER++F+ +I+ + IC +++L E+ + + L+INSPGG + +G++
Sbjct: 197 WVDLYNRLYRERLLFLGQEIDTESSNNICGLMIYLSIEDASRNLHLFINSPGGGIISGVS 256
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA-SD 150
I+DTMQF+ + T C G A SM S +L GE R ALP++R+++HQP+ F
Sbjct: 257 IFDTMQFVLAEVQTICFGLAGSMASFVLLGGELTKRLALPHSRVMMHQPASSFYKDKSRL 316
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+++++K + ++ Y + + + + L+RD MS EA D G+VD+V
Sbjct: 317 FSLDSRELLKFREKITLTYAQRTNQPEWVIWEDLERDSFMSPEEALDHGIVDRV 370
>gi|295136934|ref|YP_003587767.1| ATP-dependent Clp protease proteolytic subunit [Lathyrus sativus]
gi|293338656|gb|ADE43628.1| ATP-dependent Clp protease proteolytic subunit [Lathyrus sativus]
Length = 211
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 115/197 (58%), Gaps = 6/197 (3%)
Query: 16 LGL-VPMVVEQTNRGER---SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V Q GE D+Y +L R++F+ +IE +A + +++L EN
Sbjct: 1 MPVGVPKVAFQIP-GEDEATWVDLYHQLFYSRLLFLGDEIESELANQVAGMMIYLSLENK 59
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ L+INSPGG V +GMAI+DTMQ ++ + T CMG AASM SL+L+ G R A P
Sbjct: 60 NKDLYLFINSPGGEVMSGMAIFDTMQVVEAQVHTICMGLAASMASLILAGGGITKRLAFP 119
Query: 132 NARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+AR+++HQP + G + + A ++V ++ + IY + K ++ K L+RDH M
Sbjct: 120 HARVMIHQPHSAPYEGPSGECMLEADEMVILRETITAIYSQRTRKPVWQISKDLERDHFM 179
Query: 191 SASEACDWGVVDKVLMS 207
S EA +G++D V S
Sbjct: 180 SPEEAQAYGIIDSVSDS 196
>gi|332111751|gb|EGJ11731.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrivivax
benzoatilyticus JA2]
Length = 201
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 63/172 (36%), Positives = 104/172 (60%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K R V V G+I+D +A C +L+ L +++ I + I+SPGG V +G AI+D ++FI
Sbjct: 30 FKSRFVLVFGEIDDKLARATCERLIAL-SQDSDAPIHMLISSPGGHVESGDAIHDMIRFI 88
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++T G AS G+ + A K R LPN R ++HQP+GG G+A+DI A++I+
Sbjct: 89 NAPVTTIGSGWVASAGTHIYLAAPKERRVCLPNTRFMIHQPAGGAGGRATDIAIQAKEII 148
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
K + R+ + G+ E+V ++RD+ MSA EA +G+V +V+ + ++
Sbjct: 149 KTRERIARVVATQTGQKIEKVMADMERDYWMSADEAIAYGIVSRVIERQSEL 200
>gi|163758550|ref|ZP_02165637.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
gi|162283840|gb|EDQ34124.1| ATP-dependent Clp protease proteolytic subunit [Hoeflea
phototrophica DFL-43]
Length = 192
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 72/173 (41%), Positives = 105/173 (60%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L K R +F+ G I +A +CAQL A +I +++NSPGG V +G +I+D + F
Sbjct: 21 LFKSRSIFIYGGITQELAHKVCAQLAA-LAAASDDDIRIFVNSPGGHVESGDSIHDMIGF 79
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
IKP + G AS G+L+ + K R LPN R LLHQPSGG G SDIE A++I
Sbjct: 80 IKPKVWIIGTGWVASAGALIYVSVPKEQRLCLPNTRFLLHQPSGGTRGMVSDIEIQAREI 139
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+K+ RLN I+ K G+ E++ DRD+ +SA EA D+G+V K++ ++ +I
Sbjct: 140 IKMNARLNAIFAKATGQKIEKIAADTDRDYWLSAEEAKDYGLVGKIITNQSEI 192
>gi|255635880|gb|ACU18287.1| unknown [Glycine max]
Length = 304
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 112/189 (59%), Gaps = 8/189 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ K I LYINS G G
Sbjct: 104 DLASYLYKNRIVYLGMSLVPSVTELILAEFLYLQYEDDDKPIYLYINSTGTTKGGEKLGY 163
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M+++KPPI T C+G A +LLL+AG KG R ALP++ I++ QP F
Sbjct: 164 ETEAFAIYDVMRYVKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIRQPIARFQ 223
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D+ +++ +K L ++Y K+ KT E++E + R S SEA ++G++DKV+
Sbjct: 224 GQATDVNLARREVNNVKTELVKLYAKHMEKTPEQIEADIQRPKYFSPSEAVEYGIIDKVI 283
Query: 206 MSRIDIEEK 214
+ E++
Sbjct: 284 YNDRGSEDR 292
>gi|295137023|ref|YP_003587570.1| ATP-dependent Clp protease proteolytic subunit [Pisum sativum]
gi|293338595|gb|ADE43568.1| ATP-dependent Clp protease proteolytic subunit [Pisum sativum]
Length = 199
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 67/196 (34%), Positives = 115/196 (58%), Gaps = 4/196 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + D+Y +L +R++F+ ++E ++ +C +++L EN
Sbjct: 1 MPVGVPKVGFEVPGDDEASWIDLYHQLFFDRLLFLGQEVESEISNQVCGMMIYLSLENKY 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K + L+I SPGG V +G+AI+D MQF++ + T C+G AASM SL+L GE R A P+
Sbjct: 61 KNLYLFIKSPGGEVLSGLAIFDIMQFVEAEVQTVCVGLAASMASLILLGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ Q+ + A +++ I++ + IY + K ++ K LDRD MS
Sbjct: 121 ARVMIHQPASSAYDGQSGECMLEAHELLSIRQTMTNIYCQRTRKPSWQISKDLDRDFFMS 180
Query: 192 ASEACDWGVVDKVLMS 207
A EA +G++D + S
Sbjct: 181 AEEAQAYGIIDTIADS 196
>gi|290474765|ref|YP_003467645.1| clpA-clpP ATP-dependent serine protease proteolytic subunit
[Xenorhabdus bovienii SS-2004]
gi|289174078|emb|CBJ80865.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Xenorhabdus bovienii SS-2004]
Length = 199
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 107/175 (61%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LLK R + ++G+I +A + QLL L+ E I ++INS GG V AG I+D ++
Sbjct: 26 KLLKSRCIMISGEINQALAEKVTTQLLVLQ-EINNDPIKIFINSQGGHVEAGDTIHDLIK 84
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+P + G AS G + A K R++LPN R ++HQP GG+ G+ASDIE A++
Sbjct: 85 FIRPEVFIIGTGWVASAGITIFLAARKENRYSLPNTRFMIHQPLGGYQGKASDIEIEAKE 144
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ I+ R+N++ G++ E+VEK DR++ M +A ++G+V +++ DI+
Sbjct: 145 FLFIRSRINKLISDATGQSIEKVEKDTDRNYWMRPQQAIEYGIVGRIITKWDDIQ 199
>gi|124504813|ref|XP_001351149.1| ATP-dependent CLP protease, putative [Plasmodium falciparum 3D7]
gi|4493909|emb|CAB39018.1| ATP-dependent CLP protease, putative [Plasmodium falciparum 3D7]
Length = 370
Score = 145 bits (365), Expect = 5e-33, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I A + +QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 192 FKKRIIYLTDEINKKTADELISQLLYLDNINHN-DIKIYINSPGGSINEGLAILDIFNYI 250
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R +LPN RI++HQP G G DIE ++I+
Sbjct: 251 KSDIQTISFGLVASMASVILASGKKGKRKSLPNCRIMIHQPLGNAFGHPQDIEIQTKEIL 310
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L +T E +EK DRD+ M+A EA +G++D+V+ ++
Sbjct: 311 YLKKLLYHYLSSFTNQTVETIEKDSDRDYYMNALEAKQYGIIDEVIETK 359
>gi|149010631|ref|ZP_01832002.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
gi|149013224|ref|ZP_01834010.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147762975|gb|EDK69920.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
gi|147765112|gb|EDK72041.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 147
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 74/124 (59%), Positives = 100/124 (80%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS 141
HQP
Sbjct: 121 HQPM 124
>gi|297849204|ref|XP_002892483.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
gi|297338325|gb|EFH68742.1| ClpP protease complex subunit ClpR3 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG---- 89
D+ S LL RIV++ + + L+ A+L++L+ +P++ I +YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 90 -----MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
AIYD++ +K + T C+G A LLLSAG KG RF +P+A+ ++ QP
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGNRFMMPHAKAMIQQPRVPS 240
Query: 145 SG--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLAKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 203 KVL 205
K+L
Sbjct: 301 KIL 303
>gi|12336|emb|CAA38354.1| proteolytic subunit of ATP-dependent protease [Triticum aestivum]
Length = 216
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + R E D+Y+ + +ER +F+ +I + I +++L E+
Sbjct: 1 MPIGVPKVPYRIPRDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTRCLGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRARTPESLLEVEELHKVREMITRVYAVRTGKPFWVVSEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA + +VD V
Sbjct: 181 ADEAKAYELVDIV 193
>gi|203284651|ref|YP_002222391.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii
Ly]
gi|203288184|ref|YP_002223199.1| ATP-dependent Clp protease proteolytic component [Borrelia
recurrentis A1]
gi|201084094|gb|ACH93685.1| ATP-dependent Clp protease proteolytic component [Borrelia duttonii
Ly]
gi|201085404|gb|ACH94978.1| ATP-dependent Clp protease proteolytic component [Borrelia
recurrentis A1]
Length = 196
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 112/174 (64%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + +TG+I+ + L ++LFLEA + K I +YI+S GG + AG AI++ ++F+
Sbjct: 20 LKSRSIVITGEIDKDTSKLFQEKILFLEASDSTKPIFVYIDSEGGDIDAGFAIFNMIRFV 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+P + T +G AS G+L+ A + RF+LP+AR LLHQP GF G A+DIE + ++
Sbjct: 80 RPKVFTIGVGLVASAGALIFLAADSKSRFSLPHARYLLHQPLSGFKGVATDIEIYTNELN 139
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K LN+I K G+ +VEK DRD + + A +G+V +++ +R+++E+
Sbjct: 140 KVKSELNDIIAKETGQELNKVEKDTDRDFWLDSESAVKYGLVFQIITTRLELEK 193
>gi|298713496|emb|CBJ27051.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 323
Score = 144 bits (364), Expect = 6e-33, Method: Composition-based stats.
Identities = 70/180 (38%), Positives = 106/180 (58%), Gaps = 9/180 (5%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + LI A+LL+L E+ K + +YIN+PG T AI
Sbjct: 120 NRIVYLGMPLVPAVTELIIAELLYLNYESASKPVYMYINTPGTSTPDGRAIGFETEAFAI 179
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
D M +IKPP+ T +GQA +G++LL++GEKG R ALPNA I+LHQP GQASDI
Sbjct: 180 SDCMNYIKPPVYTIGVGQAFGLGAMLLASGEKGHRSALPNASIMLHQPRSMARGQASDIA 239
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A++++ ++ ++ + CGK Y+EV + R MS +A ++G++DKVL S +
Sbjct: 240 IKAKEVMANRKTATQMLSEACGKPYDEVLEDSSRTFYMSPDDAVEYGLIDKVLRSSKKDD 299
>gi|42527889|ref|NP_972987.1| ATP-dependent Clp protease proteolytic subunit [Treponema denticola
ATCC 35405]
gi|67460503|sp|Q73JM9|CLPP2_TREDE RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|41818934|gb|AAS12906.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Treponema
denticola ATCC 35405]
gi|325474892|gb|EGC78078.1| ATP-dependent Clp protease proteolytic subunit 2 [Treponema
denticola F0402]
Length = 200
Score = 144 bits (363), Expect = 7e-33, Method: Composition-based stats.
Identities = 67/177 (37%), Positives = 110/177 (62%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ L R + + G+I ++ I QLL +E+ + K I +YI+SPGG AG AI+D ++
Sbjct: 24 KFLNTRQIILAGEINKELSEKIVRQLLLMESLSATKPIYIYIDSPGGDADAGFAIFDMIR 83
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIK P+ T MG AS S++L A K RF +PN+ L+HQP G G A++IE HA++
Sbjct: 84 FIKAPVYTIGMGLVASAASIILLAASKERRFGMPNSHYLIHQPLSGIKGVATEIEIHAKE 143
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ K++ ++N++ + G ++V K DRD ++A E+ ++G++ K+ +R DI EK
Sbjct: 144 LEKMRVKINKLIAEETGTDEKKVAKDTDRDCWLNAKESVEYGLISKIAKNRKDIPEK 200
>gi|46446077|ref|YP_007442.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
gi|67460481|sp|Q6ME32|CLPP1_PARUW RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|46399718|emb|CAF23167.1| probable ATP-dependent Clp protease proteolytic subunit [Candidatus
Protochlamydia amoebophila UWE25]
Length = 206
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 75/177 (42%), Positives = 113/177 (63%), Gaps = 2/177 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L R +F++ ++ A+ I +L +LE +P K I INSPGG V +G AI+D ++ I
Sbjct: 30 LDSRRIFISDAVDSGSASEIIRKLWYLELTDPGKPILFVINSPGGAVDSGFAIWDQIKMI 89
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP--SGGFSGQASDIERHAQD 157
P++T G AASMGS+L G RFA P++RI++HQP SG GQA+D+E A++
Sbjct: 90 TSPVTTLVTGLAASMGSILSLCASPGRRFATPHSRIMIHQPLLSGVIKGQATDLEIQAKE 149
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
++K + L EIYV+ GK + +EK +DRD M+A EA ++G++DKV+ S +IE
Sbjct: 150 MLKTRNGLIEIYVQATGKNFAAIEKAIDRDTWMTAQEALEFGLLDKVINSFEEIEST 206
>gi|149198217|ref|ZP_01875264.1| ATP-dependent Clp protease proteolytic subunit [Lentisphaera
araneosa HTCC2155]
gi|149138819|gb|EDM27225.1| ATP-dependent Clp protease proteolytic subunit [Lentisphaera
araneosa HTCC2155]
Length = 196
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 74/184 (40%), Positives = 103/184 (55%), Gaps = 5/184 (2%)
Query: 24 EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
EQ G +L R + + +I ++ + +QL+ L + ++ I +YINS G
Sbjct: 13 EQDPGGMMK-----EMLDTRTIIIAEEISPELSRRVLSQLILLNKRSEKEPIYVYINSGG 67
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G +G IYD +QF K P+ T C G AS L+ A +KG F+LPN+R +LHQPS G
Sbjct: 68 GCADSGFTIYDMLQFFKAPVFTVCSGMCASAAILIFLAAKKGKNFSLPNSRFMLHQPSTG 127
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G ASDIE A++I K + R N+I C K EEV K DRD MS +EA +G+V K
Sbjct: 128 VRGTASDIEITAEEINKTRVRYNQIVADVCNKPLEEVSKDADRDFWMSPAEAKKYGMVSK 187
Query: 204 VLMS 207
V+ S
Sbjct: 188 VITS 191
>gi|255071097|ref|XP_002507630.1| predicted protein [Micromonas sp. RCC299]
gi|226522905|gb|ACO68888.1| predicted protein [Micromonas sp. RCC299]
Length = 289
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 8/178 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV-------- 85
D+ S + KERIV++ + + LI A+LL+L+ E+ K I LYINS G
Sbjct: 40 DLPSFIFKERIVYLGMTLVPSVTELILAELLYLQYEDKTKPIYLYINSTGTSKEGQKYGY 99
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYDT++++ P+ T +G A ++LL++GEKG R ALP+A I++ QP F
Sbjct: 100 DTEAFAIYDTIKYVNSPVHTVAVGTAWGEAAMLLASGEKGNRAALPSASIMIKQPIDAFR 159
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
GQA+D+E +++ K++ E+ K K EE+EK ++R + EA D+G++DK
Sbjct: 160 GQATDLEIQRKEMRNTKKQTLELLSKGINKPIEELEKDINRPKYFNPWEAVDYGLIDK 217
>gi|119953533|ref|YP_945742.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae
91E135]
gi|119862304|gb|AAX18072.1| ATP-dependent Clp protease proteolytic subunit [Borrelia turicatae
91E135]
Length = 196
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 112/174 (64%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + +TG+I + L ++LFLEA + K I +YI+S GG + AG AI++ ++F+
Sbjct: 20 LKSRSIVITGEINKDTSKLFQERILFLEASDCNKPIFVYIDSEGGDIDAGFAIFNMIRFV 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS G+L+ A + RF+LP+AR LLHQP GF G A+DIE + ++
Sbjct: 80 KPKVFTIGVGLVASAGALIFLAADSKSRFSLPHARYLLHQPLSGFKGVATDIEIYTNELN 139
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K LN+I K G+ ++VEK DRD + + A +G+V K++ +R+++EE
Sbjct: 140 KVKSELNDIIAKETGQELDKVEKDTDRDFWLGSESAMKYGLVFKIVTTRLELEE 193
>gi|282900571|ref|ZP_06308513.1| hypothetical protein CRC_01932 [Cylindrospermopsis raciborskii
CS-505]
gi|281194371|gb|EFA69326.1| hypothetical protein CRC_01932 [Cylindrospermopsis raciborskii
CS-505]
Length = 187
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 110/185 (59%), Gaps = 14/185 (7%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM---------- 90
+ERI+F+ + +A + + LL+L++E+ K + LYINS G V AGM
Sbjct: 3 QERILFLNQPLTTDLANSLISSLLYLDSEDSSKPVYLYINSFGDPVMAGMISEMAGMEST 62
Query: 91 ----AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
AIYDT+Q +K I T C+GQA SM +LLLS+G KG R +LP+ I L Q G
Sbjct: 63 NACLAIYDTIQHVKSEIVTICLGQAVSMAALLLSSGAKGKRVSLPHCSIALAQFRSATRG 122
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA+DI+ +AQ++++ K + +I+ N G++ E++ + +R M+ EA ++G++D VL
Sbjct: 123 QATDIQVNAQEVLRKKSLILDIFSHNTGQSREKIAQDSERIFYMTPPEAREYGLIDHVLE 182
Query: 207 SRIDI 211
+ +
Sbjct: 183 NTKQL 187
>gi|297621676|ref|YP_003709813.1| ATP-dependent Clp protease proteolytic subunit [Waddlia
chondrophila WSU 86-1044]
gi|297376977|gb|ADI38807.1| ATP-dependent Clp protease proteolytic subunit [Waddlia
chondrophila WSU 86-1044]
Length = 196
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 110/174 (63%), Gaps = 2/174 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L+ R +F++ Q+++ A I +L +LE ++P K I INSPGG V +G AI+D +Q I
Sbjct: 23 LEARRLFLSNQVDNETANEIIRKLWYLELKDPGKPILFVINSPGGSVDSGFAIWDQVQMI 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHAQD 157
P++T G AASMGS+L KG R+ P ARI++HQP GQA+D++ A++
Sbjct: 83 SSPVTTLVTGLAASMGSVLSLCAAKGKRYVTPQARIMIHQPMIGGVIQGQATDLDIQARE 142
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
I+K + +L IY+ GK YE +++ +DRD MSA EA ++G++D ++ S +
Sbjct: 143 ILKTREKLVRIYMDATGKDYETIDRAIDRDTWMSAEEAKEFGLIDAIIDSYKSL 196
>gi|296388170|ref|ZP_06877645.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PAb1]
Length = 201
Score = 144 bits (363), Expect = 8e-33, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 113/172 (65%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R VFVTG +++ MA + QL L + + + I +++NSPGG V +G I+D ++FI
Sbjct: 26 LKVRKVFVTGGVDEKMAKDVVQQLHILASISDE-PIYMFVNSPGGHVESGDMIFDAIRFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P + G AS G+L+ +A +K R++LPN R LLHQPSGG G AS+IE + ++IV
Sbjct: 85 TPKVIMIGSGSVASAGALIYAAADKENRYSLPNTRFLLHQPSGGIQGPASNIEIYRREIV 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++K RL+ I+ + G+T E++ +RD ++A EA +G+V+K+++S +I
Sbjct: 145 RMKERLDRIFAEATGQTPEKISADTERDFWLNAEEAVQYGLVNKIIVSEREI 196
>gi|83645181|ref|YP_433616.1| ATP-dependent Clp protease proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
gi|83633224|gb|ABC29191.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Hahella
chejuensis KCTC 2396]
Length = 194
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 114/190 (60%), Gaps = 3/190 (1%)
Query: 23 VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
E+ ++ +R + YS K R VF+ G++ MA C +L+ L AE+ + I + I+SP
Sbjct: 8 PEKGSKTDRIEEQYS--FKSRFVFIFGEVNHEMAQATCQRLIAL-AEDSEDPIRVLISSP 64
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
GG V +G AI+D ++FI+ P+ T G AS G+ + A EK R LPN R ++HQP G
Sbjct: 65 GGHVESGDAIHDIIRFIRAPVITVGAGWVASAGTHIYLAAEKERRVCLPNTRFMIHQPGG 124
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G G ASDI A++I++ + R+ + + GK +E+V ++RD MS EA D+G+V
Sbjct: 125 GAGGPASDIAIQAKEILRARERIAHVVARQTGKPFEKVLVDIERDFWMSPEEAMDYGIVS 184
Query: 203 KVLMSRIDIE 212
+V+ S D++
Sbjct: 185 RVVESYKDLQ 194
>gi|163858206|ref|YP_001632505.1| ATP-dependent Clp protease proteolytic component [Bordetella petrii
DSM 12804]
gi|163261934|emb|CAP44236.1| similar to ATP-dependent Clp protease proteolytic component
[Bordetella petrii]
Length = 217
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 60/175 (34%), Positives = 99/175 (56%), Gaps = 1/175 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+ R V V G I D +A+ +LL L+AE+ I + ++SPGG + +G AI+D +FI
Sbjct: 44 FRTRTVLVFGTITDAVASETVRRLLTLDAESDA-PIDMIVSSPGGHLESGDAIHDVARFI 102
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++ G S + L + RF LP R L+HQPSGG G ASD+ HA++I+
Sbjct: 103 SAPVNMIGTGWVGSAATHLYLGAPRERRFCLPQTRFLIHQPSGGAGGPASDMAIHAKEII 162
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + R+ ++ + G+ E V + ++RD MSA EA +G+ +++ R D+ +
Sbjct: 163 RARERIAQVIARETGQPIERVRQDIERDLWMSAEEAIAYGLASRIIERRGDLAGR 217
>gi|167471039|ref|ZP_02335743.1| ATP-dependent Clp protease proteolytic subunit [Yersinia pestis
FV-1]
Length = 119
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 88/121 (72%), Positives = 105/121 (86%), Gaps = 2/121 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D + LVPMVVEQT+RGERSYDI+SRLLKERI+F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDQFAPNMALVPMVVEQTSRGERSYDIFSRLLKERIIFLTGQVEDHMANLIT 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+
Sbjct: 59 AQMLFLEAENPEKDIFLYINSPGGVITAGMSIYDTMQFIKPDVSTICMGQACSMGAFLLT 118
Query: 121 A 121
A
Sbjct: 119 A 119
>gi|120434784|ref|YP_860470.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii
KT0803]
gi|117576934|emb|CAL65403.1| ATP-dependent Clp protease proteolytic subunit [Gramella forsetii
KT0803]
Length = 186
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 81/183 (44%), Positives = 124/183 (67%), Gaps = 3/183 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T + + D ++LL++R +++ G++ D A + +L +L+ E EI L+INSPGG
Sbjct: 7 KTGKIQDLID--NKLLEKRKIYMWGEVSDKTAKYVIDRLEYLDLEGDG-EIQLFINSPGG 63
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VT G AIYDT+ ++ P+ST C G AASMGS+LLSAG+KG RF P+A++++HQPSGG
Sbjct: 64 YVTDGFAIYDTIMSLESPVSTICTGLAASMGSILLSAGKKGRRFIQPHAKVMIHQPSGGA 123
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQAS+IE A +I+K K EI +NCG++ ++V K +RD+ M A E+ ++G+VD +
Sbjct: 124 RGQASNIEIAANEILKTKHLSAEIIAENCGQSVDKVLKDFNRDYWMDAEESMEYGIVDGI 183
Query: 205 LMS 207
Sbjct: 184 FKK 186
>gi|15598522|ref|NP_252016.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PAO1]
gi|107102858|ref|ZP_01366776.1| hypothetical protein PaerPA_01003926 [Pseudomonas aeruginosa PACS2]
gi|116051341|ref|YP_789826.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa UCBPP-PA14]
gi|218890478|ref|YP_002439342.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa LESB58]
gi|254236288|ref|ZP_04929611.1| hypothetical protein PACG_02259 [Pseudomonas aeruginosa C3719]
gi|254242013|ref|ZP_04935335.1| hypothetical protein PA2G_02739 [Pseudomonas aeruginosa 2192]
gi|313108675|ref|ZP_07794673.1| putative ATP-dependent Clp protease proteolytic subunit
[Pseudomonas aeruginosa 39016]
gi|18203008|sp|Q9HYR9|CLPP2_PSEAE RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|9949457|gb|AAG06714.1|AE004755_1 probable Clp-family ATP-dependent protease [Pseudomonas aeruginosa
PAO1]
gi|115586562|gb|ABJ12577.1| putative ATP-dependent Clp protease proteolytic subunit
[Pseudomonas aeruginosa UCBPP-PA14]
gi|126168219|gb|EAZ53730.1| hypothetical protein PACG_02259 [Pseudomonas aeruginosa C3719]
gi|126195391|gb|EAZ59454.1| hypothetical protein PA2G_02739 [Pseudomonas aeruginosa 2192]
gi|218770701|emb|CAW26466.1| probable Clp-family ATP-dependent protease [Pseudomonas aeruginosa
LESB58]
gi|310881175|gb|EFQ39769.1| putative ATP-dependent Clp protease proteolytic subunit
[Pseudomonas aeruginosa 39016]
Length = 201
Score = 144 bits (363), Expect = 9e-33, Method: Composition-based stats.
Identities = 70/172 (40%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R VFVTG +++ MA + QL L + + I +++NSPGG V +G I+D ++FI
Sbjct: 26 LKVRKVFVTGGVDEKMAKDVVQQLHILASISDD-PIYMFVNSPGGHVESGDMIFDAIRFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P + G AS G+L+ +A +K R++LPN R LLHQPSGG G AS+IE + ++IV
Sbjct: 85 TPKVIMIGSGSVASAGALIYAAADKENRYSLPNTRFLLHQPSGGIQGPASNIEIYRREIV 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++K RL+ I+ + G+T E++ +RD ++A EA +G+V+K+++S +I
Sbjct: 145 RMKERLDRIFAEATGQTPEKISADTERDFWLNAEEAVQYGLVNKIIVSEREI 196
>gi|289066851|ref|YP_003434369.1| clp protease proteolytic subunit [Vigna radiata]
gi|259020038|gb|ACV90236.1| clp protease proteolytic subunit [Vigna radiata]
Length = 194
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 71/193 (36%), Positives = 113/193 (58%), Gaps = 5/193 (2%)
Query: 16 LGL-VPMVVEQTN--RGERSYDI-YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ + VP V + R DI +RL +ER++F+ ++ ++ + + +++L E
Sbjct: 1 MPIGVPRVPFRIPGDRDAAWIDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
KE+SL+INSPGG V G+AIYDTMQF++P + T C+G AASMGS LL+ G R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+A I S + QA + A++++K++ + +YV+ GK + ++RD MS
Sbjct: 121 HAMI-HQPASSFYEAQAGEFVLEAEELLKLRETITNVYVQRTGKPLWVISDDMERDVFMS 179
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|254553625|gb|ACT67271.1| clp protease proteolytic subunit [Joinvillea plicata]
Length = 218
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 113/193 (58%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+Y+RL +ER +F+ ++ + I +++L E+
Sbjct: 1 MPVGVPKVPFRIPGDEEATWVDLYNRLYRERTLFLGQEVRCEITNNITGLMVYLSIEDGI 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ L+INSPGG + +GMAI+DTM + P + T C+G AASM S +L GE R A P+
Sbjct: 61 SDLFLFINSPGGWIMSGMAIFDTMSTVTPDVYTICIGIAASMASFILLGGEPTKRIAFPH 120
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + + A+++ K++ + +YV GK++ + + ++RD MS
Sbjct: 121 ARIMLHQPASAYYRTRTGEFVLEAEELTKVREMITRVYVLRTGKSFWVISEDMERDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA D +VD V
Sbjct: 181 ATEAKDHRIVDIV 193
>gi|62184864|ref|YP_219649.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
abortus S26/3]
gi|81312959|sp|Q5L6P3|CLPP1_CHLAB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|62147931|emb|CAH63678.1| putative protease proteolytic subunit [Chlamydophila abortus S26/3]
Length = 192
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I ++L R VF + + D A +L +LE NP + I INSPGG V AG A++D
Sbjct: 14 IERKILDARRVFFSEPVTDKSAADAIKKLWYLELTNPGQPIVFVINSPGGSVDAGFAVWD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIE 152
++ + P++T G AASMGS+L G RFA P++RI++HQPS +GQA+D++
Sbjct: 74 QIKMMTSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLD 133
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
HA++I+K K+R+ ++Y++ G++ E +EK +DRD M+A EA D+G++D +L S D+
Sbjct: 134 IHAREILKTKKRIVDVYLEATGQSREVIEKAIDRDTWMTADEAKDFGLLDGILFSFNDL 192
>gi|168183296|ref|ZP_02617960.1| Clp protease [Clostridium botulinum Bf]
gi|182673417|gb|EDT85378.1| Clp protease [Clostridium botulinum Bf]
Length = 198
Score = 144 bits (362), Expect = 1e-32, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LLK R + ++G+I +A + QLL LE E + I ++INS GG V + I+D ++
Sbjct: 24 KLLKSRTIVISGEINQSLAEKVITQLLILE-EMGDEPIKIFINSQGGHVESADTIHDMIK 82
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A +K R++LPN R ++HQP GGF+GQA+DI A++
Sbjct: 83 FIKPKVIMIGTGWVASAGITIYLAADKKNRYSLPNTRYMIHQPLGGFNGQATDIGIEAEE 142
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+K++ R+N I + + E++EK DR++ +++ +A +G+V K++ + +++
Sbjct: 143 ILKVRNRINTIISEATNQPLEKIEKDTDRNYWLNSDDAMTYGIVGKIISTHPELD 197
>gi|328543430|ref|YP_004303539.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
gi|326413175|gb|ADZ70238.1| ATP-dependent Clp protease proteolytic subunit [Polymorphum gilvum
SL003B-26A1]
Length = 205
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 1/174 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L R V +TG I +A +C++LL L A+ I++ ++SPGG V +G I+DT++F
Sbjct: 33 LFDARTVLITGPITQELARDVCSRLLAL-AQVSGDPITVIVSSPGGHVESGDMIHDTIKF 91
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I+P + MG AS G+L+ + K RF PN R LLHQPSGG G A+DIE A++I
Sbjct: 92 IRPDVRILGMGWVASAGALIYVSVPKERRFCTPNTRFLLHQPSGGAGGMATDIEIQAREI 151
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+K++ RLN+I+ G+ E +EK DRD+ M E ++G+V KV+ + ++
Sbjct: 152 LKMRDRLNKIFADATGQPLERIEKDTDRDYWMGPDEGIEYGLVGKVVQTVDELR 205
>gi|329942546|ref|ZP_08291356.1| clp protease family protein [Chlamydophila psittaci Cal10]
gi|313847774|emb|CBY16764.1| putative protease proteolytic subunit [Chlamydophila psittaci RD1]
gi|325507036|gb|ADZ18674.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
psittaci 6BC]
gi|328815456|gb|EGF85444.1| clp protease family protein [Chlamydophila psittaci Cal10]
gi|328914424|gb|AEB55257.1| Clp protease [Chlamydophila psittaci 6BC]
Length = 192
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 73/179 (40%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I ++L R VF + + D A +L +LE NP + I INSPGG V AG A++D
Sbjct: 14 IERKILDARRVFFSEPVTDKSAAEAIKKLWYLELTNPGQPIVFVINSPGGSVDAGFAVWD 73
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIE 152
++ + P++T G AASMGS+L G RFA P++RI++HQPS +GQA+D++
Sbjct: 74 QIKMMTSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLD 133
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
HA++I+K K+R+ ++Y++ G++ E +EK +DRD M+A EA D+G++D +L S D+
Sbjct: 134 IHAREILKTKKRIVDVYLEATGQSREVIEKAIDRDTWMTADEAKDFGLLDGILFSFNDL 192
>gi|289621889|emb|CBI51800.1| putative ATP-dependent Clp protease, proteolytic subunit [Sordaria
macrospora]
Length = 225
Score = 143 bits (361), Expect = 1e-32, Method: Composition-based stats.
Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 41/222 (18%)
Query: 3 FEGCAKKDSEDVFLGL-VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICA 61
F G + +P + E T+ G R + + G I+D + I A
Sbjct: 26 FTGSGSGAPLRPMGNIPMPYITEVTSGGW------------RTLCLNGAIDDTTSAAIVA 73
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
QLL+LE++NP K I++YINSPGG V++G+AIYDTM +IK P+ST C+G AASM ++LL
Sbjct: 74 QLLWLESDNPDKPITMYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIG 133
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT--YEE 179
GE G R+ALP++ ++ I +I+ ++N+I + K+ YE+
Sbjct: 134 GEPGKRYALPHSTVM---------------------IQRIREQINKIVQSHINKSFGYEK 172
Query: 180 -----VEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ ++RD ++A EA + GVVD++L R+ E + K
Sbjct: 173 YDLAAISDMMERDKYLTAEEAVELGVVDQILDRRVKDEAEKK 214
>gi|290489456|gb|ADD31112.1| clp protease proteolytic subunit protein [Bulnesia arborea]
Length = 196
Score = 143 bits (361), Expect = 2e-32, Method: Composition-based stats.
Identities = 60/193 (31%), Positives = 103/193 (53%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V E D+Y+RL ++R++F+ ++ D ++ + +++L E+
Sbjct: 1 MPVGVPKVPFLIPGDEDASWVDLYNRLYRQRLLFLGQEVNDEISNQLIGLMVYLSLEDST 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
L+INSPGG++ G+ I TM + P + T CMG A S G +L GE R A P+
Sbjct: 61 LNQYLFINSPGGLILPGIGIVSTMSTLVPEVQTICMGSAISTGCFILVGGEITKRMAFPH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR++LHQP+ F D+ ++I+ + + YV GK + + + +D MS
Sbjct: 121 ARVMLHQPASSFLEAPMRDMILEGEEILNLYEIVTTTYVIRTGKPLWVIVEDMKKDVFMS 180
Query: 192 ASEACDWGVVDKV 204
A EA ++G+VD +
Sbjct: 181 AEEAKNYGLVDLI 193
>gi|197106599|ref|YP_002131976.1| protease subunit of ATP-dependent Clp protease [Phenylobacterium
zucineum HLK1]
gi|196480019|gb|ACG79547.1| protease subunit of ATP-dependent Clp protease [Phenylobacterium
zucineum HLK1]
Length = 205
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 1/175 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+ L K R V V G+I+ +A + AQL L AE+ + I + INSPGG V +G I+D +
Sbjct: 32 NALFKSRTVLVFGEIDMRLAERVTAQLTALAAESDK-PIRMIINSPGGHVESGDTIHDMI 90
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
QF P++ G AS G+ + K R LPN R LLHQP+GG GQASDIE A+
Sbjct: 91 QFSPAPVTVIGTGWVASAGAHIYLGAPKEHRLCLPNTRFLLHQPAGGVRGQASDIEIEAE 150
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+I+K++ R+N + + G++YE+V+K R+ MSA +A ++G+V +++ + +I
Sbjct: 151 EIIKMRERVNRMIARETGQSYEKVDKDTTRNFWMSAEQAVEYGLVSRIIKNTAEI 205
>gi|89890619|ref|ZP_01202129.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Flavobacteria bacterium BBFL7]
gi|89517534|gb|EAS20191.1| ATP-dependent proteolytic subunit of ClpA-ClpP serine protease
[Flavobacteria bacterium BBFL7]
Length = 180
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/165 (47%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
++R +F+ G + D A +LL+L++ N + EI+ INSPGG VT+G +IYDTMQ IK
Sbjct: 17 EQRKIFIWGMVNDQTAKHCVDRLLYLDSLNHE-EITFVINSPGGYVTSGFSIYDTMQQIK 75
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ST C G AASMGSLLLS GEKG RF + R+++HQPSGG G ++DIE A +I+K
Sbjct: 76 SPVSTVCSGLAASMGSLLLSGGEKGRRFIQKHGRVMIHQPSGGARGTSADIEITAAEILK 135
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
K I NCG+T+E++ K +RD+ + A EA +G+VD ++
Sbjct: 136 TKELSAHILADNCGQTFEKIMKDFNRDYWLGADEAVAYGIVDGIV 180
>gi|237793935|ref|YP_002861487.1| Clp protease [Clostridium botulinum Ba4 str. 657]
gi|229261558|gb|ACQ52591.1| Clp protease [Clostridium botulinum Ba4 str. 657]
Length = 198
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+LLK R + ++G+I +A + QLL LE E + I ++INS GG V + I+D ++
Sbjct: 24 KLLKSRTIVISGEINQSLAEKVITQLLILE-EMGDEPIKIFINSQGGHVESADTIHDMIK 82
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G ++ A +K R++LPN R ++HQP GGF+GQA+DI A++
Sbjct: 83 FIKPKVIMIGTGWVASAGIIIYLAADKKNRYSLPNTRYMIHQPLGGFNGQATDIGIEAEE 142
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+K++ R+N I + + E++EK DR++ +++ +A +G+V K++ + +++
Sbjct: 143 ILKVRNRINTIISEATNQPLEKIEKDTDRNYWLNSDDAMTYGIVGKIISTHPELD 197
>gi|47088548|gb|AAT10593.1| putative ATP-dependent Clp protease subunit [Oryza sativa Japonica
Group]
Length = 209
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 65/186 (34%), Positives = 105/186 (56%), Gaps = 3/186 (1%)
Query: 22 VVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
V + E D+Y+ + +ER +F+ +I + I +++L E+ +I L+I
Sbjct: 1 VPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFI 60
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NSPGG + +GMAI+DTMQ + P I C+G AASM S +L GE R A P+ARI+LHQ
Sbjct: 61 NSPGGWLISGMAIFDTMQTVTPDIYAICLGIAASMASFILLGGEPTKRIAFPHARIMLHQ 120
Query: 140 PSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
P+ + + + +++ K++ + +Y GK + V + ++RD MSA EA +
Sbjct: 121 PASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAY 180
Query: 199 GVVDKV 204
G+VD V
Sbjct: 181 GLVDIV 186
>gi|166235773|gb|ABY85678.1| ATP-dependent protease proteolytic subunit [Silene sordida]
Length = 196
Score = 143 bits (360), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 116/193 (60%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V MS
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSXXXXXXXXMS 180
Query: 192 ASEACDWGVVDKV 204
A+EA G+VD V
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|156618928|ref|YP_001430063.1| ATP-dependent Clp protease proteolytic subunit [Cuscuta gronovii]
gi|159106818|ref|YP_001531238.1| clp protease proteolytic subunit [Cuscuta obtusiflora]
gi|160380549|sp|A7M922|CLPP_CUSGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|156555966|emb|CAM98350.1| ATP-dependent Clp protease proteolytic subunit [Cuscuta gronovii]
gi|158142542|gb|ABW20583.1| clp protease proteolytic subunit [Cuscuta obtusiflora]
Length = 198
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 112/193 (58%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMV--VEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + + G+ DIY+RL +ER +F+T I + + ++L ++
Sbjct: 1 MPIGVPRVRFLYDEDTGQVWIDIYNRLYRERCLFLTHTINTKIGNQLAGLFIYLGIQDDP 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K+I ++NSPGG + +G+AIYD+MQ ++P T C+G AASM LL G R A P+
Sbjct: 61 KDIFFFLNSPGGGIISGLAIYDSMQVVRPDTQTICVGLAASMACFLLVGGTITKRLAFPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP S F Q D +++K++ L E+Y + GK + + + ++RD +S
Sbjct: 121 ARVMMHQPLSTFFETQTGDAVMEVDELLKMRENLIEVYAQRTGKPHWVISEDIERDVFLS 180
Query: 192 ASEACDWGVVDKV 204
+EA +G+VD V
Sbjct: 181 PTEAKTYGLVDVV 193
>gi|332190278|gb|AEE28399.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 370
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG---- 89
D+ S LL RIV++ + + L+ A+L++L+ +P++ I +YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 90 -----MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
AIYD++ +K + T C+G A LLLSAG KG RF +P+A+ ++ QP
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240
Query: 145 SG--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 203 KVL 205
++L
Sbjct: 301 RIL 303
>gi|51970012|dbj|BAD43698.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 315
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG---- 89
D+ S LL RIV++ + + L+ A+L++L+ +P++ I +YINS G G
Sbjct: 106 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 165
Query: 90 -----MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
AIYD++ +K + T C+G A LLLSAG KG RF +P+A+ ++ QP
Sbjct: 166 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 225
Query: 145 SG--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D
Sbjct: 226 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 285
Query: 203 KVL 205
++L
Sbjct: 286 RIL 288
>gi|18390982|ref|NP_563836.1| ATP-dependent Clp protease proteolytic subunit, putative
[Arabidopsis thaliana]
gi|79317437|ref|NP_001031008.1| ATP-dependent Clp protease proteolytic subunit, putative
[Arabidopsis thaliana]
gi|75301131|sp|Q8L770|CLPR3_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 3, chloroplastic; Short=ClpR3;
AltName: Full=nClpP8; Flags: Precursor
gi|22531207|gb|AAM97107.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|25083963|gb|AAN72143.1| ATP-dependent Clp protease proteolytic subunit (ClpR3), putative
[Arabidopsis thaliana]
gi|51968388|dbj|BAD42886.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968776|dbj|BAD43080.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51968816|dbj|BAD43100.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969676|dbj|BAD43530.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969856|dbj|BAD43620.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51969858|dbj|BAD43621.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971032|dbj|BAD44208.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971379|dbj|BAD44354.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971381|dbj|BAD44355.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971625|dbj|BAD44477.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|51971739|dbj|BAD44534.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|110742786|dbj|BAE99296.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
gi|332190276|gb|AEE28397.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
gi|332190277|gb|AEE28398.1| ATP-dependent Clp protease proteolytic subunit-related protein 3
[Arabidopsis thaliana]
Length = 330
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 62/183 (33%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG---- 89
D+ S LL RIV++ + + L+ A+L++L+ +P++ I +YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 90 -----MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
AIYD++ +K + T C+G A LLLSAG KG RF +P+A+ ++ QP
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQQPRVPS 240
Query: 145 SG--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 203 KVL 205
++L
Sbjct: 301 RIL 303
>gi|194398443|ref|YP_002037392.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae G54]
gi|194358110|gb|ACF56558.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae G54]
Length = 147
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 78/145 (53%), Positives = 109/145 (75%), Gaps = 2/145 (1%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA + AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDSTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y+N+PGG V+AG+AI TM FIK + T MG AASMG+++ S+G KG RF LPNA ++
Sbjct: 61 YVNTPGGSVSAGLAIVXTMNFIKADVQTIVMGMAASMGTVIASSGAKGKRFMLPNAEYMI 120
Query: 138 HQPS--GGFSGQASDIERHAQDIVK 160
HQP G Q +D+ A+ ++K
Sbjct: 121 HQPMGGTGGGTQQTDMAIAAEHLLK 145
>gi|308799978|ref|XP_003074770.1| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
gi|119358788|emb|CAL52028.2| ClpP3 ATP-dependent Clp protease proteolytic subunit ClpR, putat
(IC) [Ostreococcus tauri]
Length = 244
Score = 142 bits (359), Expect = 2e-32, Method: Composition-based stats.
Identities = 67/180 (37%), Positives = 106/180 (58%), Gaps = 8/180 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV-------- 85
D+ S + +ERIV++ + + LI A+LL+L+ E+ +K I LYINS G
Sbjct: 65 DLPSFIFQERIVYLGMTLVPSVTELILAELLYLQYEDKKKPIQLYINSTGSSKDGKKYGY 124
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+ AIYDT+Q++ PP+ T +G A ++LL++G KG R ALP+A I+L QP F
Sbjct: 125 DSEAFAIYDTIQYVSPPVHTIAVGTAWGEAAMLLASGSKGQRAALPSASIMLKQPLSSFR 184
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQAS++E Q++ K+++ +I K G+ +E ++R SEA +G++DKVL
Sbjct: 185 GQASELEIQRQEMRNTKKQMLDILAKTTGRDIATIETDINRPLYFEPSEAIKYGLIDKVL 244
>gi|283455718|ref|YP_003360282.1| ATP-dependent Clp protease proteolytic subunit 1 [Bifidobacterium
dentium Bd1]
gi|283102352|gb|ADB09458.1| clp1 ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium dentium Bd1]
Length = 171
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 78/161 (48%), Positives = 115/161 (71%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ +++D MA ICAQ+L L AE+P+K+I LYINSPGG +TAGMAIYDTMQ I+P ++T
Sbjct: 1 MGEEVKDDMANRICAQMLMLAAEDPKKDIWLYINSPGGSITAGMAIYDTMQLIEPDVATV 60
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
+G ASMG LLS+G KG RF +AR+L+HQPSGG G A+D+ +A+ I+ +K+ ++
Sbjct: 61 GLGMCASMGQFLLSSGTKGKRFLTSHARVLMHQPSGGIGGTATDVRINAELIMDMKKTMS 120
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
E+ + G T EE+ + + DH +A EA ++G VDK++ +
Sbjct: 121 ELTAEQTGHTVEEIYRDNEYDHWFTAQEALEYGFVDKLVST 161
>gi|225428973|ref|XP_002264383.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296083061|emb|CBI22465.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 66/191 (34%), Positives = 94/191 (49%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I +A L+ AQ ++L+ +NP K I LYINS G G
Sbjct: 169 DLPSLLLDARICYLGMPIVPAVAELLVAQFMWLDFDNPSKPIYLYINSTGTQNEKMETVG 228
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D+M + K + T G A ++LLS G KG R PNA L
Sbjct: 229 SETEAYAIADSMAYCKSDVYTVNCGTAYGQAAMLLSVGAKGYRGLQPNASTKLYLPKVNR 288
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG D+ A+++ E+ K GKT EE++K ++R + A EA D+G+ DK
Sbjct: 289 SSGATIDMWIKAKELDANSEYYIELLAKGTGKTKEEIKKDVERPKYLQAQEAIDYGLADK 348
Query: 204 VLMSRIDIEEK 214
++ S EK
Sbjct: 349 IISSMDPAYEK 359
>gi|298208499|ref|YP_003716678.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Croceibacter
atlanticus HTCC2559]
gi|83848422|gb|EAP86291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Croceibacter
atlanticus HTCC2559]
Length = 182
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 82/180 (45%), Positives = 125/180 (69%), Gaps = 3/180 (1%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+T++ + D S L+ER VF+ GQ++D A + +L++L++++ + EI +INSPGG
Sbjct: 4 KTSKIQDLID--SNFLEERKVFLWGQVDDKSAKHVVDRLMYLDSQSNE-EIQFFINSPGG 60
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
VTAG ++YDT+ +K P+ST G ASMGS+LLSAG+KG RF P+AR+++HQPSGG
Sbjct: 61 YVTAGFSMYDTIMSLKSPVSTIASGLCASMGSILLSAGKKGRRFIQPHARVMIHQPSGGA 120
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQAS+IE AQ+I+K K +I NC + +++V K +RD+ M A E+ D+G+VD +
Sbjct: 121 RGQASNIEIQAQEIIKTKELSAKILADNCDQDFDKVMKDFNRDYWMDAQESIDYGIVDAI 180
>gi|152986625|ref|YP_001347177.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
aeruginosa PA7]
gi|150961783|gb|ABR83808.1| putative Clp protease [Pseudomonas aeruginosa PA7]
Length = 201
Score = 142 bits (359), Expect = 3e-32, Method: Composition-based stats.
Identities = 67/172 (38%), Positives = 112/172 (65%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R VFV G++ + +A + QL L + + + I +++NSPGG V +G I+D ++FI
Sbjct: 26 LKARKVFVIGEVNEKLARDVVQQLHILASISDE-PIHMFVNSPGGHVESGDMIFDAIRFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P + G AS G+L+ +A +K R++LPN R LLHQPSGG G AS+IE + ++IV
Sbjct: 85 TPKVIMIGSGSVASAGALIYAAADKENRYSLPNTRFLLHQPSGGIQGPASNIEIYRREIV 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++K RL+ I+ + G+T E++ +RD ++A EA +G+V+++++S +I
Sbjct: 145 RMKERLDRIFAEATGQTAEKISADTERDFWLNAEEAQAYGLVNRIIVSEREI 196
>gi|221059998|ref|XP_002260644.1| ATP-dependent Clp protease [Plasmodium knowlesi strain H]
gi|193810718|emb|CAQ42616.1| ATP-dependent Clp protease, putative [Plasmodium knowlesi strain H]
Length = 1101
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 108/184 (58%), Gaps = 11/184 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV--------- 85
I S LL +RI+F++ + H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 70 IPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIINLN 129
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+T ++I D +++I + T+C+G+A + +L S+G+KG RF+L N+ L+Q
Sbjct: 130 GITDVISIIDVIEYISSDVYTYCLGKAYGISCILASSGKKGFRFSLKNSSFCLNQSYSVI 189
Query: 145 -SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QA++IE ++I+ KR++ EI N GK +E+ L+RD SA EA ++ +VD
Sbjct: 190 PFNQATNIEIQNKEIMNTKRKVVEIIANNTGKDKSHIEQILERDRYFSAPEAVEFNLVDH 249
Query: 204 VLMS 207
+L
Sbjct: 250 ILEK 253
>gi|89898588|ref|YP_515698.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila felis
Fe/C-56]
gi|116243111|sp|Q253I5|CLPP2_CHLFF RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|89331960|dbj|BAE81553.1| ATP-dependent Clp endopeptidase ATP-binding proteolytic subunit 1
[Chlamydophila felis Fe/C-56]
Length = 196
Score = 142 bits (358), Expect = 3e-32, Method: Composition-based stats.
Identities = 75/184 (40%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Query: 31 RSYDIYSR-LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
+ D+ R +L R VF + + D A +L +LE NP + I INSPGG V AG
Sbjct: 13 KLQDVIDRKILDTRRVFFSEPVTDKSAADAIKKLWYLELTNPGQPIVFVINSPGGSVDAG 72
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQ 147
A++D ++ + P++T G AASMGS+L G RFA P++RI++HQPS +GQ
Sbjct: 73 FAVWDQIKMMTSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQ 132
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+D++ HA++I+K K+R+ ++YV+ G+ E +EK +DRD M+A EA D+G++D +L S
Sbjct: 133 ATDLDIHAREILKTKKRIVDVYVEATGQPREVIEKAIDRDMWMTADEAKDFGLLDGILFS 192
Query: 208 RIDI 211
D+
Sbjct: 193 FNDL 196
>gi|224103735|ref|XP_002313173.1| predicted protein [Populus trichocarpa]
gi|222849581|gb|EEE87128.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 67/191 (35%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + L+ AQ ++L+ E+P K I LYINS G G
Sbjct: 173 DLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYEDPSKPIYLYINSSGTQNEKMETVG 232
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D M + K I T G A ++LLS G KG R PN+ L
Sbjct: 233 SETEAYAIADIMSYCKSTIYTVNCGMAYGQAAMLLSLGAKGYRALQPNSSTKLYLPKVNR 292
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG A D+ A+++ E+ K GK EE+ K + R + A EA D+G+ DK
Sbjct: 293 SSGAAVDMWIKAKELDANTEYYIELLAKGTGKPKEELVKDIQRPKYLKAQEAIDYGIADK 352
Query: 204 VLMSRIDIEEK 214
+L S D EK
Sbjct: 353 LLSSNDDAFEK 363
>gi|110776269|ref|XP_001123103.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit 1-like,
partial [Apis mellifera]
Length = 222
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 88/126 (69%), Positives = 109/126 (86%), Gaps = 1/126 (0%)
Query: 9 KDSEDVF-LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
K+S +++ LVPMVVEQT+RGER++DIYSRLLKERI+F+TG + D +A+LI AQLL+LE
Sbjct: 96 KESLEIYDNTLVPMVVEQTSRGERAFDIYSRLLKERIIFLTGPVYDQVASLISAQLLYLE 155
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ NP+KEIS YINSPGGVV+AG+AIYDTMQ+I+ P+ST C+GQAASMGSLLL GE R
Sbjct: 156 SVNPKKEISFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLCGGEPNNR 215
Query: 128 FALPNA 133
FALPNA
Sbjct: 216 FALPNA 221
>gi|326496965|dbj|BAJ98509.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 146
Score = 142 bits (357), Expect = 4e-32, Method: Composition-based stats.
Identities = 65/134 (48%), Positives = 96/134 (71%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I +Y+NSPGG VTAGMAI+DTM+ I+P +ST C+G AASMG+ LLS G KG R++LPN+
Sbjct: 1 DIIMYVNSPGGSVTAGMAIFDTMKHIRPDVSTVCIGLAASMGAFLLSGGTKGKRYSLPNS 60
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
RI++HQP GG GQ +D+E A +++ K LN + G+ +++ DRD MSA
Sbjct: 61 RIMIHQPLGGAQGQETDLEIQANEMLHHKANLNGYLAYHTGQPLDKINVDTDRDFFMSAK 120
Query: 194 EACDWGVVDKVLMS 207
EA ++G++D V+++
Sbjct: 121 EAKEYGLIDGVIVN 134
>gi|226531596|ref|NP_001140352.1| hypothetical protein LOC100272400 [Zea mays]
gi|194699128|gb|ACF83648.1| unknown [Zea mays]
Length = 289
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 67/184 (36%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ +K I +YINS G G
Sbjct: 89 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYMYINSTGTTKNGEKLGY 148
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T +A+YD M+++K PI T C+G A +LLL+AG KG R ALP++ I++ QP G F
Sbjct: 149 ETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIGRFQ 208
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D++ ++I +K + ++ ++ GK EE+ + + R S SEA D+G++DKV+
Sbjct: 209 GQATDVDIARKEIRNVKIEMVKLLARHIGKPMEEIARDIRRPKYFSPSEAVDYGIIDKVI 268
Query: 206 MSRI 209
+
Sbjct: 269 YNEK 272
>gi|270285501|ref|ZP_06194895.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Nigg]
gi|270289512|ref|ZP_06195814.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Weiss]
gi|301336898|ref|ZP_07225100.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
MopnTet14]
gi|14194529|sp|Q9PJW1|CLPP1_CHLMU RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 192
Score = 141 bits (356), Expect = 6e-32, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 30 ERSYDIYSR-LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
+ DI R LL R +F + + + A +L +LE +P + I INSPGG V A
Sbjct: 8 HKLQDIIDRKLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTSPGQPIVFVINSPGGSVDA 67
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSG 146
G A++D ++ I P++T G AASMGS+L G RFA P+ARI++HQPS +G
Sbjct: 68 GFAVWDQIKMISSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHARIMIHQPSIGGTITG 127
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD MSA+EA ++G++D +L
Sbjct: 128 QATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDMWMSANEAMEFGLLDGILF 187
Query: 207 SRIDI 211
S D+
Sbjct: 188 SFNDL 192
>gi|242052591|ref|XP_002455441.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
gi|241927416|gb|EES00561.1| hypothetical protein SORBIDRAFT_03g010870 [Sorghum bicolor]
Length = 291
Score = 141 bits (355), Expect = 6e-32, Method: Composition-based stats.
Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 8/184 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ +K I LYINS G G
Sbjct: 91 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGY 150
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T +A+YD M+++K PI T C+G A +LLL+AG KG R ALP++ I++ QP G F
Sbjct: 151 ETEALAVYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIGRFQ 210
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D++ ++I +K + ++ ++ GK EE+ + + R S SEA D+G++DKV+
Sbjct: 211 GQATDVDIARKEIRNVKIEMVKLLARHIGKPIEEIARDIRRPKYFSPSEAVDYGIIDKVI 270
Query: 206 MSRI 209
+
Sbjct: 271 YNEK 274
>gi|166235817|gb|ABY85720.1| ATP-dependent protease proteolytic subunit [Silene pseudoatocion]
Length = 196
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V ++ E D+Y+RL +ER++F+ +++ ++ + +++L E+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L GE R A P+
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 133 ARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP+ F Q + A++++K++ L +YV+ GK V + ++R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERXXXXX 180
Query: 192 ASEACDWGVVDKV 204
A G+VD V
Sbjct: 181 XXXAQAHGIVDLV 193
>gi|187918699|ref|YP_001884175.1| ATP-dependent Clp protease proteolytic subunit [Borrelia hermsii
DAH]
gi|119861547|gb|AAX17342.1| ATP-dependent Clp protease [Borrelia hermsii DAH]
Length = 196
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 111/174 (63%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + +TG+I + L ++LFLEA + K I +YI+S GG + AG AI++ ++F+
Sbjct: 20 LKSRSIVITGEINKDTSKLFQEKILFLEASDCDKPIFVYIDSEGGDIDAGFAIFNMIRFV 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS G+L+ A + RF+LP+AR LLHQP GF G A+DIE + ++
Sbjct: 80 KPKVFTIGVGLVASAGALIFLAADSNSRFSLPHARYLLHQPLSGFKGVATDIEIYTNELN 139
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K LN+I K G+ +VEK DRD + + A +G+V K++ +R+++E+
Sbjct: 140 KVKSELNDIVAKETGQELNKVEKDTDRDFWLDSESAMQYGLVFKIVTTRLELEK 193
>gi|29839992|ref|NP_829098.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
caviae GPIC]
gi|33300944|sp|Q824C7|CLPP1_CHLCV RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|29834339|gb|AAP04976.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila
caviae GPIC]
Length = 191
Score = 141 bits (355), Expect = 7e-32, Method: Composition-based stats.
Identities = 71/176 (40%), Positives = 113/176 (64%), Gaps = 2/176 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
++L R VF + + D A +L +LE +P + I INSPGG V AG A++D ++
Sbjct: 16 KILDARRVFFSEPVTDKSAADAIKKLWYLELSHPGQPIVFVINSPGGSVDAGFAVWDQIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHA 155
+ P++T G AASMGS+L G RFA P++RI++HQPS +GQA+D++ HA
Sbjct: 76 MMTSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLDIHA 135
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++I+K K+R+ ++Y++ G+ E +EK +DRD M+A EA D+G++D +L S D+
Sbjct: 136 REILKTKKRIVDVYLEATGQPREVIEKAIDRDMWMTADEAKDFGLLDGILFSFDDL 191
>gi|15835330|ref|NP_297089.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia muridarum
Nigg]
gi|7190745|gb|AAF39527.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydia
muridarum Nigg]
Length = 196
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 3/185 (1%)
Query: 30 ERSYDIYSR-LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
+ DI R LL R +F + + + A +L +LE +P + I INSPGG V A
Sbjct: 12 HKLQDIIDRKLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTSPGQPIVFVINSPGGSVDA 71
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSG 146
G A++D ++ I P++T G AASMGS+L G RFA P+ARI++HQPS +G
Sbjct: 72 GFAVWDQIKMISSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHARIMIHQPSIGGTITG 131
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
QA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD MSA+EA ++G++D +L
Sbjct: 132 QATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDMWMSANEAMEFGLLDGILF 191
Query: 207 SRIDI 211
S D+
Sbjct: 192 SFNDL 196
>gi|282891192|ref|ZP_06299695.1| hypothetical protein pah_c048o018 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281498885|gb|EFB41201.1| hypothetical protein pah_c048o018 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 199
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 74/188 (39%), Positives = 113/188 (60%), Gaps = 4/188 (2%)
Query: 26 TNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
T + E D LL+ R +F++ ++ + A I +L +LE P K I INSPGG
Sbjct: 13 TPKTEEKID--RALLEARRIFLSDAVDSNTAADIIKKLWYLELTAPGKPILFVINSPGGS 70
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--G 143
V +G AI+D ++ I P++T G AASMGS+L AG RFA PN+R ++HQP
Sbjct: 71 VDSGFAIWDQIKMISSPVTTLVTGLAASMGSVLSLAGAPKRRFATPNSRFMIHQPLIGGV 130
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
GQA+D+E A++++K + L E+Y++ GK + +EK +DRD MSA EA ++G++
Sbjct: 131 IKGQATDLEIQAKEMLKTRNTLIELYMRETGKDFAAIEKAIDRDTWMSAQEAYEFGLLSG 190
Query: 204 VLMSRIDI 211
V+ S D+
Sbjct: 191 VVESYKDL 198
>gi|148977888|ref|ZP_01814441.1| ATP-dependent Clp protease proteolytic subunit [Vibrionales
bacterium SWAT-3]
gi|145962834|gb|EDK28106.1| ATP-dependent Clp protease proteolytic subunit [Vibrionales
bacterium SWAT-3]
Length = 130
Score = 141 bits (355), Expect = 8e-32, Method: Composition-based stats.
Identities = 75/130 (57%), Positives = 99/130 (76%)
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
SPGG VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R LPN+R+++HQP
Sbjct: 1 SPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGTPGKRHVLPNSRVMIHQP 60
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GGF GQASDI+ HAQ+I+ IK++LN++ ++ G+ E VE+ DRD+ MSA +A ++G+
Sbjct: 61 LGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVVERDTDRDNFMSADQAVEYGL 120
Query: 201 VDKVLMSRID 210
VD VL R
Sbjct: 121 VDSVLNHRGQ 130
>gi|78062017|ref|YP_371925.1| ATP-dependent Clp protease proteolytic subunit [Burkholderia sp.
383]
gi|77969902|gb|ABB11281.1| ATP-dependent Clp protease proteolytic subunit ClpP [Burkholderia
sp. 383]
Length = 203
Score = 140 bits (354), Expect = 8e-32, Method: Composition-based stats.
Identities = 72/190 (37%), Positives = 107/190 (56%), Gaps = 4/190 (2%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+ + +DI L + R VF+TG IE MA + L L + I ++I+SPGG
Sbjct: 14 SSEGNAKLFDI---LTRARKVFITGTIEQRMARDVVQHLHALAHISDD-PIQVFISSPGG 69
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V +G I+DT++FIKP + T G AS G+L+ A K R+ LPN R LLHQPSG
Sbjct: 70 HVESGDLIFDTLRFIKPRVITIGSGWVASAGALIYLAANKEDRYTLPNTRFLLHQPSGES 129
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G ASD+ + +IVK++ RLN I+ G+ E++ RD +SA EA +G+ K+
Sbjct: 130 RGPASDLNIYLDEIVKMRDRLNRIFADATGQAVEKIASDTARDFWLSAEEAVQYGLAYKI 189
Query: 205 LMSRIDIEEK 214
+ S +I+ +
Sbjct: 190 ISSESEIDNR 199
>gi|115435898|ref|NP_001042707.1| Os01g0271400 [Oryza sativa Japonica Group]
gi|113532238|dbj|BAF04621.1| Os01g0271400 [Oryza sativa Japonica Group]
Length = 298
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 71/188 (37%), Positives = 113/188 (60%), Gaps = 8/188 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ +K I LYINS G G
Sbjct: 98 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGY 157
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T AIYD M+++K PI T C+G A +LLL+AG KG R ALP++ I++ QP G F
Sbjct: 158 ETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKGNRAALPSSTIMIKQPIGRFQ 217
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D++ ++I +K + ++ ++ GK+ EE+ + + R S SEA D+G++DKVL
Sbjct: 218 GQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVDYGIIDKVL 277
Query: 206 MSRIDIEE 213
+ E+
Sbjct: 278 YNEKSQED 285
>gi|94502250|ref|ZP_01308735.1| ATP-dependent Clp protease proteolytic subunit 2 [Candidatus Sulcia
muelleri str. Hc (Homalodisca coagulata)]
gi|94451188|gb|EAT14128.1| ATP-dependent Clp protease proteolytic subunit 2 [Candidatus Sulcia
muelleri str. Hc (Homalodisca coagulata)]
Length = 189
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 71/160 (44%), Positives = 109/160 (68%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++E+ D++SRL+ +RI+F+ I+D +A +I AQLLFL++ + K I
Sbjct: 30 SMTPYIMEERKYNVSQMDVFSRLMMDRIIFLGTPIDDQIANIIQAQLLFLQSLDSNKGIQ 89
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V +G+ IYDTMQ +KP IST C G AASM ++LL +G+KG R L ++R+L
Sbjct: 90 IYINSPGGSVYSGLGIYDTMQILKPEISTICTGIAASMAAILLCSGKKGKRSILKHSRVL 149
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+HQP G GQ+SD+E ++I+K+K LN+I ++ +
Sbjct: 150 IHQPIGYAKGQSSDMEITVREILKLKEELNKIISEHTNQP 189
>gi|156101828|ref|XP_001616607.1| ATP-dependent Clp protease proteolytic subunit [Plasmodium vivax
SaI-1]
gi|148805481|gb|EDL46880.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium vivax]
Length = 1104
Score = 140 bits (354), Expect = 9e-32, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV--------- 85
I S LL +RI+F++ + H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 65 IPSMLLSKRIIFLSSPVYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIINLN 124
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+T ++I D + +I + T+C+G+A + +L S+G+KG RF+L N+ L+Q
Sbjct: 125 GMTDVISIIDVIDYISSDVYTYCLGKAYGISCILASSGKKGFRFSLKNSSFCLNQSYSVI 184
Query: 145 -SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QA++IE ++I+ KR++ EI N GK +E+ L+RD SA EA + +VD
Sbjct: 185 PFNQATNIEIQNKEIMNTKRKVVEIIANNTGKEKSHIERILERDRYFSAPEAVQFNLVDH 244
Query: 204 VLMS 207
+L
Sbjct: 245 ILER 248
>gi|51971563|dbj|BAD44446.1| ClpP protease complex subunit ClpR3 [Arabidopsis thaliana]
Length = 330
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 61/183 (33%), Positives = 103/183 (56%), Gaps = 11/183 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG---- 89
D+ S LL RIV++ + + L+ A+L++L+ +P++ I +YINS G G
Sbjct: 121 DLPSMLLDGRIVYIGMPLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGTTRDDGETVG 180
Query: 90 -----MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
AIYD++ +K + T C+G A LLLSAG KG RF +P+A+ ++ +P
Sbjct: 181 MESEGFAIYDSLMQLKNEVHTVCVGAAIGQACLLLSAGTKGKRFMMPHAKAMIQRPRVPS 240
Query: 145 SG--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D
Sbjct: 241 SGLMPASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVID 300
Query: 203 KVL 205
++L
Sbjct: 301 RIL 303
>gi|326495296|dbj|BAJ85744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 282
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 69/182 (37%), Positives = 110/182 (60%), Gaps = 8/182 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ E+ +K I +YINS G G
Sbjct: 83 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYEDAEKPIYMYINSTGTTKNGEKLGY 142
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T A+YD M+++K PI T C+G A +LLL+AG KG R ALP++ I++ QP G F
Sbjct: 143 ETEAFAVYDAMRYVKIPIFTLCIGNAWGEAALLLAAGAKGNRAALPSSTIMMKQPIGRFQ 202
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GQA+D++ ++I +K + ++ ++ GK EE+ + + R S SEA D+G++DKVL
Sbjct: 203 GQATDVDIARKEIRNVKIEMVKLLSRHIGKPMEEIARDIRRPKYFSPSEAVDYGIIDKVL 262
Query: 206 MS 207
+
Sbjct: 263 HN 264
>gi|86139431|ref|ZP_01058000.1| ATP-dependent Clp protease proteolytic subunit [Roseobacter sp.
MED193]
gi|85823934|gb|EAQ44140.1| ATP-dependent Clp protease proteolytic subunit [Roseobacter sp.
MED193]
Length = 197
Score = 140 bits (354), Expect = 1e-31, Method: Composition-based stats.
Identities = 65/172 (37%), Positives = 103/172 (59%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+ R V V G+I D +A A LL L AE I+++I+SPGG V +G ++D + FI
Sbjct: 26 FQSRTVIVAGEINDKLAQRTVAHLLAL-AEESDDPINIFISSPGGHVESGDMVHDVIGFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+P + T G AS G+L+ ++ R+ LPN R LLHQPSGG GQASD+ A+ I
Sbjct: 85 RPKVRTIGTGWVASAGALIYVGAKQENRYCLPNTRFLLHQPSGGIGGQASDMLIQAEQIK 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+++R + ++ + G+T E++E RD ++A EA D+G+ K++ S ++
Sbjct: 145 IMRQRFDLLFAEATGQTPEKIEADTARDFWLTAQEAIDYGLAGKIIHSAEEL 196
>gi|271969828|ref|YP_003344024.1| endopeptidase Clp [Streptosporangium roseum DSM 43021]
gi|270513003|gb|ACZ91281.1| Endopeptidase Clp [Streptosporangium roseum DSM 43021]
Length = 208
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 62/178 (34%), Positives = 102/178 (57%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L + R++ + G ++D TL+ QL+ L ++ +I+L+I+SPGG V + +AI D ++
Sbjct: 18 LYEGRVLVLDGPLDDDNGTLLATQLIALATQDASTDIALWIHSPGGSVPSMLAIRDIIRL 77
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I +ST MG A S G LLS+G G R ALP+AR+L+HQ S G G A DIE A D+
Sbjct: 78 IPCDVSTLAMGIAYSAGQFLLSSGTPGKRRALPHARVLMHQGSAGIGGTAVDIELQADDL 137
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ + + ++ G+ E + + D +A EA D+G +D ++ S +I + +
Sbjct: 138 RHTRDTVLGLIAEDTGQPVERIFEDSLHDRWYTAQEALDYGFIDAIVQSFDEIAPRDR 195
>gi|166201969|gb|ABY84440.1| ATP-dependent protease proteolytic subunit [Oenothera macrocarpa]
Length = 408
Score = 140 bits (353), Expect = 1e-31, Method: Composition-based stats.
Identities = 67/193 (34%), Positives = 111/193 (57%), Gaps = 4/193 (2%)
Query: 16 LGL-VPMVVEQTNRGE--RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E D+++ L + R VF+ ++ + I + ++FL ENP+
Sbjct: 1 MPVGVPRVAFRVPGDENASWVDLFNGLFRARSVFLGQELNEEGGNDIASLMIFLALENPK 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K I ++NSPGG+ AG+AI DTM F+ P + T +G ASM S LL+ G G R A +
Sbjct: 61 KSIYFFLNSPGGLALAGLAISDTMDFVTPDVYTLGLGLVASMASFLLACGTPGKRRASDH 120
Query: 133 ARILLHQPSGGF-SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
R ++HQPS F + A +JE +++ I+ + + YV+ G+ +++ L RD MS
Sbjct: 121 MRAMIHQPSSKFLNEAALNJEFSRRELQSIRDIVIKTYVEKTGQDARVIKEDLRRDSFMS 180
Query: 192 ASEACDWGVVDKV 204
A+E+ D+G+VD V
Sbjct: 181 ATESKDYGLVDDV 193
>gi|308807947|ref|XP_003081284.1| CLPP2_MYXXA ATP-dependent Clp protease proteolytic subunit 2 (ISS)
[Ostreococcus tauri]
gi|116059746|emb|CAL55453.1| CLPP2_MYXXA ATP-dependent Clp protease proteolytic subunit 2 (ISS)
[Ostreococcus tauri]
Length = 174
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 59/170 (34%), Positives = 102/170 (60%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D++ L ERIVF+ +I++++A CA+LL LEAE+P+ EI +++N G AI
Sbjct: 3 DVFGALASERIVFLGQRIDENVALDACARLLALEAEDPEGEIRIWVNCVAGTQYCVTAIL 62
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D M+++ PIST +G A +L++AG+KG R+ +AR++L QP GG +G + +++
Sbjct: 63 DMMEYVSCPISTVALGCVAGPPVMLVAAGDKGKRYGTQSARMVLSQPLGGLAGTSIEVKI 122
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
A+++ + + + GK +E+E + RD M EA D+G++D
Sbjct: 123 QAKELNRNAKAQVGFIARYTGKDADELEAMMARDTYMGVQEAIDFGLLDH 172
>gi|111115588|ref|YP_710206.1| ATP-dependent Clp protease proteolytic subunit [Borrelia afzelii
PKo]
gi|216263563|ref|ZP_03435558.1| Clp protease [Borrelia afzelii ACA-1]
gi|110890862|gb|ABH02030.1| ATP-dependent Clp protease proteolytic component [Borrelia afzelii
PKo]
gi|215980407|gb|EEC21228.1| Clp protease [Borrelia afzelii ACA-1]
Length = 198
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 109/174 (62%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE+ + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLESLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE +A ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYANELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KLKKELNNIISKETGQNISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQLEE 194
>gi|302807086|ref|XP_002985274.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
gi|300147102|gb|EFJ13768.1| hypothetical protein SELMODRAFT_424284 [Selaginella moellendorffii]
Length = 357
Score = 140 bits (352), Expect = 2e-31, Method: Composition-based stats.
Identities = 63/192 (32%), Positives = 93/192 (48%), Gaps = 10/192 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RIV++ I + LI A++LFL+ +NP K I LYIN G G
Sbjct: 136 DLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKESVG 195
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DTM ++K + T G A ++LLS GEKG R P++ L
Sbjct: 196 FETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKLYAPKVNQ 255
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG A D+ A+++ + ++ K GK EE+ K + R A EA ++G+ DK
Sbjct: 256 SSGSAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKEAVEYGLADK 315
Query: 204 VLMSRIDIEEKS 215
V+ + +
Sbjct: 316 VIEEPDVLMDAK 327
>gi|224003027|ref|XP_002291185.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972961|gb|EED91292.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 186
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 104/174 (59%), Gaps = 5/174 (2%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
SR L++R +++ I++ + I + LL+L+ E+ +++I LY+N PG ++ +AIYD++
Sbjct: 13 SRQLRDRKLWIGQFIDEEASNSIISSLLYLQNESDKEDIELYLNIPGAILRPSLAIYDSI 72
Query: 97 QFIK---PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG--FSGQASDI 151
+K IST + A MG+L+ AG KG R++LPNAR LL + F GQA+DI
Sbjct: 73 NELKADGCKISTTNIALCAGMGALIAGAGTKGRRYSLPNARYLLQKTGIDSVFRGQATDI 132
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++ K ++N + G+ + +++ L RD +S+ EA +G++D+VL
Sbjct: 133 ALEVANVKKWNEKINGEISRVTGQPIDRIDQDLKRDFYLSSEEAVRYGLIDEVL 186
>gi|15618431|ref|NP_224716.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae CWL029]
gi|15836051|ref|NP_300575.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae J138]
gi|16752522|ref|NP_444784.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae AR39]
gi|33241872|ref|NP_876813.1| ATP-dependent Clp protease proteolytic subunit [Chlamydophila
pneumoniae TW-183]
gi|6831515|sp|Q9Z832|CLPP1_CHLPN RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|4376809|gb|AAD18660.1| CLP Protease [Chlamydophila pneumoniae CWL029]
gi|7189161|gb|AAF38099.1| ATP-dependent Clp protease, proteolytic subunit [Chlamydophila
pneumoniae AR39]
gi|8978891|dbj|BAA98726.1| CLP protease [Chlamydophila pneumoniae J138]
gi|33236381|gb|AAP98470.1| endopeptidase [Chlamydophila pneumoniae TW-183]
gi|269303395|gb|ACZ33495.1| Clp protease [Chlamydophila pneumoniae LPCoLN]
Length = 191
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 72/179 (40%), Positives = 115/179 (64%), Gaps = 2/179 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I LL+ R VF + + + A+ +L +LE ++P K I INSPGG V AG A++D
Sbjct: 13 IEKELLEARRVFFSEPVTEKSASDAIKKLWYLELKDPGKPIVFVINSPGGSVDAGFAVWD 72
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIE 152
++ + P++T G AASMGS+L G RFA P++RI++HQPS +GQA+D++
Sbjct: 73 QIKMLTSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLD 132
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
HA++I+K K R+ ++YV+ + + +EK +DRD M+A+EA D+G++D +L S D+
Sbjct: 133 IHAREILKTKARIIDVYVEATNQPRDIIEKAIDRDMWMTANEAKDFGLLDGILFSFNDL 191
>gi|239814219|ref|YP_002943129.1| endopeptidase Clp [Variovorax paradoxus S110]
gi|239800796|gb|ACS17863.1| Endopeptidase Clp [Variovorax paradoxus S110]
Length = 198
Score = 139 bits (351), Expect = 2e-31, Method: Composition-based stats.
Identities = 59/172 (34%), Positives = 101/172 (58%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K R + + G I D +A + +L+ L+A++ K I + ++SPGG + +G AI+D ++FI
Sbjct: 25 FKSRTLLIFGSITDSVAADVTRRLIALDADSGDKPIDILVSSPGGHLESGDAIHDIVRFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++ G S + L A + R LPN R L+HQPSGG GQA+DI AQ+I+
Sbjct: 85 SAPVNMIGTGWVGSAATHLYLAVPRERRVCLPNTRFLIHQPSGGAGGQATDIAIQAQEII 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
K + R+ + GK + V ++RD +SA+EA ++G+V +++ + ++
Sbjct: 145 KARHRIAHEIARETGKPIDVVLADIERDRWLSAAEAVEYGLVSRIIQRKTEL 196
>gi|18402863|ref|NP_564560.1| CLPR1; serine-type endopeptidase [Arabidopsis thaliana]
gi|75315328|sp|Q9XJ35|CLPR1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 1, chloroplastic; Short=ClpR1;
AltName: Full=nClpP5; Flags: Precursor
gi|8569101|gb|AAF76446.1|AC015445_13 Identical to nClpP5 from Arabidopsis thaliana gb|AB022330 and
contains prenyltransferase PF|00432 and CLP protease
PF|00574 domains. ESTs gb|H76908, gb|AA605567,
gb|T21932, gb|T22976 come from this gene
gi|5360595|dbj|BAA82069.1| nClpP5 [Arabidopsis thaliana]
gi|15010752|gb|AAK74035.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|23308343|gb|AAN18141.1| At1g49970/F2J10_5 [Arabidopsis thaliana]
gi|332194380|gb|AEE32501.1| ATP-dependent Clp protease proteolytic subunit-related protein 1
[Arabidopsis thaliana]
Length = 387
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + L+ AQ ++L+ +NP K I LYINSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DT+ + K + T G A ++LLS G+KG R P++ L
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG A D+ A+++ E+ K GK+ E++ + + R + A A D+G+ DK
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350
Query: 204 VLMSRIDIEEK 214
+ S+ EK
Sbjct: 351 IADSQDSSFEK 361
>gi|296139201|ref|YP_003646444.1| endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
gi|296027335|gb|ADG78105.1| Endopeptidase Clp [Tsukamurella paurometabola DSM 20162]
Length = 206
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 10/193 (5%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
VP E+ R L +R+V + G ++D L+ QLL L A + +EI+L+
Sbjct: 7 VPQFTERVRR---------ELYDQRVVILDGPLDDDNGALLATQLLSLAA-DSDREIALW 56
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I+SPGG V A +AI D M+ I +ST G A S G LLSAG +G R ALP+AR+L+H
Sbjct: 57 IHSPGGSVPAMLAIRDVMRLIPCDVSTLVFGIAYSAGQFLLSAGTRGKRRALPHARVLMH 116
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
Q S G G A DIE A D+ + + + ++ G+ E++ + D +A EA D+
Sbjct: 117 QGSAGIGGTAVDIELQAGDLRHTRDTVLGLIAEDTGRPEEQIFEDSLHDRWYTAREAQDY 176
Query: 199 GVVDKVLMSRIDI 211
G +D+++ S DI
Sbjct: 177 GFIDEIVESFDDI 189
>gi|319791980|ref|YP_004153620.1| endopeptidase clp [Variovorax paradoxus EPS]
gi|315594443|gb|ADU35509.1| Endopeptidase Clp [Variovorax paradoxus EPS]
Length = 197
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 60/173 (34%), Positives = 103/173 (59%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K R + + G I D +A + +L+ L+A+N +K I + ++SPGG + +G AI+D ++FI
Sbjct: 25 FKSRTLLIFGSITDSVAADVTRRLIALDADNAEKPIDILVSSPGGHLESGDAIHDIVRFI 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++ G S + L A + R LPN R L+HQPSGG GQA+DI AQ+I+
Sbjct: 85 SAPVNMIGTGWVGSAATHLFLAAPRERRVCLPNTRFLIHQPSGGAGGQATDIAIQAQEII 144
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
K ++R+ + GK + V ++RD +SA EA ++G+V +++ + +++
Sbjct: 145 KARQRIAHEIARETGKHIDVVLADIERDRWLSAEEAVEYGLVSRIIQRKTELK 197
>gi|56808248|ref|ZP_00366019.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Streptococcus pyogenes M49 591]
Length = 159
Score = 139 bits (350), Expect = 3e-31, Method: Composition-based stats.
Identities = 70/157 (44%), Positives = 105/157 (66%), Gaps = 2/157 (1%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
MA + AQLLFL+A++ K+I LY+N+PGG V+AG+AI DTM FIK + T MG AASM
Sbjct: 1 MANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMNFIKADVQTIVMGMAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPS--GGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
G+++ S+G KG RF LPNA ++HQP G Q +D+ A+ ++K + RL +I +N
Sbjct: 61 GTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQN 120
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
GKT +++ K +RD+ MSA E +G +D+++ +
Sbjct: 121 AGKTIKQIHKDAERDYWMSAEETLAYGFIDEIMENNE 157
>gi|297852688|ref|XP_002894225.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
gi|297340067|gb|EFH70484.1| hypothetical protein ARALYDRAFT_891918 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 138 bits (349), Expect = 4e-31, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + L+ AQ ++L+ +NP K I LYINSPG G
Sbjct: 171 DLPSLLLDARICYLGMPIVPAVTELLVAQFMWLDYDNPTKPIYLYINSPGTQNEKMETVG 230
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DT+ + K + T G A ++LLS G+KG R P++ L
Sbjct: 231 SETEAYAIADTISYCKSDVYTINCGMAFGQAAMLLSLGKKGYRAVQPHSSTKLYLPKVNR 290
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG A D+ A+++ E+ K GK+ E++ + + R + A A D+G+ DK
Sbjct: 291 SSGAAIDMWIKAKELDANTEYYIELLAKGTGKSKEQINEDIKRPKYLQAQAAIDYGIADK 350
Query: 204 VLMSRIDIEEK 214
+ S+ EK
Sbjct: 351 IADSQDSSFEK 361
>gi|255507017|ref|ZP_05382656.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D(s)2923]
gi|289525475|emb|CBJ14952.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis Sweden2]
gi|296435027|gb|ADH17205.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/150]
gi|296438747|gb|ADH20900.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis E/11023]
Length = 192
Score = 138 bits (348), Expect = 4e-31, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 14/203 (6%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + V+++ +LL R +F + + + A +L +LE N
Sbjct: 2 PEGEMMHKLQDVIDR------------KLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTN 49
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + I INSPGG V AG A++D ++ I P++T G AASMGS+L G RFA
Sbjct: 50 PGQPIVFVINSPGGSVDAGFAVWDQIKMISSPLTTVVTGLAASMGSVLSLCAVPGRRFAT 109
Query: 131 PNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P+ARI++HQPS +GQA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD
Sbjct: 110 PHARIMIHQPSIGGTITGQATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDM 169
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
MSA+EA ++G++D +L S D+
Sbjct: 170 WMSANEAIEFGLLDGILFSFNDL 192
>gi|283050417|gb|ADB07594.1| ATP-dependent Clp protease proteolytic subunit [Oryza punctata]
gi|283050421|gb|ADB07597.1| ATP-dependent Clp protease proteolytic subunit [Oryza
malampuzhaensis]
Length = 191
Score = 138 bits (348), Expect = 5e-31, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRSEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|166154644|ref|YP_001654762.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 434/Bu]
gi|166155519|ref|YP_001653774.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|301335911|ref|ZP_07224155.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2tet1]
gi|190358743|sp|B0B803|CLPP1_CHLT2 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|165930632|emb|CAP04129.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 434/Bu]
gi|165931507|emb|CAP07083.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis L2b/UCH-1/proctitis]
Length = 192
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 121/203 (59%), Gaps = 14/203 (6%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + V+++ +LL R +F + + + A +L +LE N
Sbjct: 2 PEGEMMHKLQDVIDR------------KLLDSRRIFFSEPVTEKSAAEAIKKLWYLELTN 49
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + I INSPGG V AG A++D ++ I P++T G AASMGS+L G RFA
Sbjct: 50 PGQPIVFVINSPGGSVDAGFAVWDQIKMISSPLTTVVTGLAASMGSVLSLCAVPGRRFAT 109
Query: 131 PNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P+ARI++HQPS +GQA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD
Sbjct: 110 PHARIMIHQPSIGGTITGQATDLDIHAREILKTKARIIDVYVEATGQSPEVIEKAIDRDM 169
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
MSA+EA ++G++D +L S D+
Sbjct: 170 WMSANEAMEFGLLDGILFSFNDL 192
>gi|260366281|ref|ZP_05778737.1| endopeptidase Clp [Vibrio parahaemolyticus K5030]
gi|308114048|gb|EFO51588.1| endopeptidase Clp [Vibrio parahaemolyticus K5030]
Length = 127
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 71/125 (56%), Positives = 96/125 (76%)
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G VTAGM+IYDTMQFIKP +ST CMGQA SMG+ LL+ G G R+ LPN+R+++HQP GG
Sbjct: 1 GSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAAGKRYVLPNSRVMIHQPLGG 60
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
F GQASDI+ HAQ+I+ IK++LN + ++ G+ E +E+ DRD+ MSA +A ++G+VD
Sbjct: 61 FQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDRDNFMSAEQAVEYGIVDA 120
Query: 204 VLMSR 208
VL R
Sbjct: 121 VLSHR 125
>gi|330444244|ref|YP_004377230.1| Clp protease [Chlamydophila pecorum E58]
gi|328807354|gb|AEB41527.1| Clp protease [Chlamydophila pecorum E58]
Length = 194
Score = 138 bits (347), Expect = 5e-31, Method: Composition-based stats.
Identities = 71/174 (40%), Positives = 109/174 (62%), Gaps = 2/174 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L R VF + + A +L +LE +P K I+ INSPGG V AG AI+D ++ +
Sbjct: 21 LSNRRVFFCEPVTEKSAADAIRKLWYLEMTDPGKPITFVINSPGGSVDAGFAIWDQIKML 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHAQD 157
P++T G AASMGS+L G RFA P++RI++HQPS +GQA+D++ HA++
Sbjct: 81 TSPVTTVVTGLAASMGSVLSLCAAPGRRFATPHSRIMIHQPSIGGPITGQATDLDIHARE 140
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
I+K K R+ ++YV+ + + +EK +DRD M+A EA D+G++D +L S D+
Sbjct: 141 ILKTKARIVDVYVEATHQPRDVIEKAIDRDMWMTADEAKDFGLLDGILFSFNDL 194
>gi|255573147|ref|XP_002527503.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223533143|gb|EEF34901.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 308
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 89/191 (46%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + L+ AQ ++L+ ++ K I LYINS G G
Sbjct: 90 DLPSLLLDARICYLGMPIVPAVTELLVAQFMYLDYDDSSKPIYLYINSSGTQNEKMETVG 149
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D M + K + T G A +LLS G KG R PNA L
Sbjct: 150 SETEAYAIADAMFYCKSTVYTVNCGMAYGQAGMLLSLGAKGYRALQPNASTKLYLPKVNR 209
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG D+ A+++ ++ K GKT EE+ K + R ++ EA ++G+ DK
Sbjct: 210 SSGAVIDMWIKAKELDANTEYYIDLLAKGTGKTKEEINKDIQRPKYFNSKEAIEYGLADK 269
Query: 204 VLMSRIDIEEK 214
++ S D EK
Sbjct: 270 IVDSSDDAFEK 280
>gi|322700293|gb|EFY92049.1| ATP-dependent Clp protease proteolytic subunit 1 [Metarhizium
acridum CQMa 102]
Length = 174
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 83/169 (49%), Positives = 115/169 (68%), Gaps = 7/169 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
M+ I AQLL+LE++ P+K I++YINSPGG VT+GMAIYDTM +IK P+ST C+G AASM
Sbjct: 1 MSASIVAQLLWLESDTPEKPITMYINSPGGSVTSGMAIYDTMTYIKSPVSTVCVGGAASM 60
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
++LL+ GE G RFALP++ I++HQP GG GQASDI +A I +I+ + N+I +
Sbjct: 61 AAILLAGGEAGKRFALPHSSIMIHQPLGGTRGQASDILIYANQIQRIREQSNKIMQYHLN 120
Query: 175 K-------TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K + EEV ++RD +S EA D GV+D +L R D +E +
Sbjct: 121 KAKGTDKYSLEEVNDMMERDKYLSVDEALDLGVIDGILTKRTDKKEGEE 169
>gi|257065503|ref|YP_003145175.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
gi|256793156|gb|ACV23826.1| protease subunit of ATP-dependent protease [Slackia
heliotrinireducens DSM 20476]
Length = 197
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 65/198 (32%), Positives = 117/198 (59%), Gaps = 4/198 (2%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
++ P +++++NRG ++ I ++L +R + G I+ +C QL +L+ E+P
Sbjct: 1 MNISSADTPNIIKESNRGYDTFRIVDKMLADREIACIGPIDAAQTDSLCLQLRYLQKEDP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
EI+++ NSPGG V +G+AIYDTM+ + P+ T C+G A SM +LL +G+ R LP
Sbjct: 61 AAEITIFFNSPGGEVQSGLAIYDTMRAVSCPVRTVCLGMAGSMAALLFISGD--QRDMLP 118
Query: 132 NARILLHQPSGG--FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
++R+++H P SG A +++ A ++++ + EI ++ GKT +EV +T D
Sbjct: 119 HSRVMIHDPLLQGGVSGSALEVKTIADNLMRTRDITAEIIAEHTGKTIDEVLETTAHDAY 178
Query: 190 MSASEACDWGVVDKVLMS 207
A EA +G+ D+V+ +
Sbjct: 179 FEAEEAVAYGLADRVIRT 196
>gi|218249761|ref|YP_002375256.1| Clp protease [Borrelia burgdorferi ZS7]
gi|223889372|ref|ZP_03623958.1| Clp protease [Borrelia burgdorferi 64b]
gi|226321456|ref|ZP_03796983.1| Clp protease [Borrelia burgdorferi Bol26]
gi|218164949|gb|ACK75010.1| Clp protease [Borrelia burgdorferi ZS7]
gi|223885058|gb|EEF56162.1| Clp protease [Borrelia burgdorferi 64b]
gi|226233252|gb|EEH32004.1| Clp protease [Borrelia burgdorferi Bol26]
Length = 198
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 108/174 (62%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LEA + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQLEE 194
>gi|222151830|ref|YP_002560990.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|222120959|dbj|BAH18294.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
Length = 184
Score = 138 bits (347), Expect = 6e-31, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 114/174 (65%), Gaps = 1/174 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
++++ R + ++G I+D A + QLL L++ N + I L I+SPGG V +G I+D +
Sbjct: 12 KMIESRTILISGGIDDKSAKEVVNQLLLLDSINHE-PIKLIISSPGGHVDSGYLIHDMIN 70
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FI+ + G S G L+ +G+K R+ALPN R ++HQPSGG GQAS++E A++
Sbjct: 71 FIESEVKIIGAGWVVSAGVLIYLSGKKENRYALPNTRFMIHQPSGGTQGQASNMEITAKE 130
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
I++ +++LNE+ + GK+ EEVE+ RD+ ++ EA ++G+V+K++ ++ +I
Sbjct: 131 IIRTRQKLNELIARETGKSVEEVEQHTGRDYWLNTEEAKEYGIVNKIIENQKEI 184
>gi|15595102|ref|NP_212891.1| ATP-dependent Clp protease proteolytic subunit [Borrelia
burgdorferi B31]
gi|32171353|sp|O51698|CLPP2_BORBU RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2688687|gb|AAC67097.1| ATP-dependent Clp protease proteolytic component (clpP-2) [Borrelia
burgdorferi B31]
Length = 206
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/174 (38%), Positives = 108/174 (62%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LEA + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 29 LKSRSIVIAGEITKDVSRLFQEKILLLEALDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 88
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 89 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 148
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 149 KVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQLEE 202
>gi|70954204|ref|XP_746160.1| ATP-dependent CLP protease [Plasmodium chabaudi chabaudi]
gi|56526687|emb|CAH78759.1| ATP-dependent CLP protease, putative [Plasmodium chabaudi chabaudi]
Length = 240
Score = 137 bits (346), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 105/169 (62%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I + + QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 61 FKKRIIYLTDEINKKTSDELIKQLLYLDNINHN-DIKIYINSPGGSINEGLAILDIFNYI 119
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R + PN RI++HQP G G DIE ++I+
Sbjct: 120 KSDIQTISFGLVASMASVILASGKKGKRKSFPNCRIMIHQPLGNAFGHPHDIEIQTKEIL 179
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L K K+ E +EK DRD+ M+A EA ++G+VD+V+ ++
Sbjct: 180 YLKKLLYYYLSKFTNKSEETIEKHSDRDYYMNALEAKEYGIVDEVVETK 228
>gi|255023203|ref|ZP_05295189.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-208]
Length = 190
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A +K RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAKKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVKEAKDYGIVNEIIENRDGLK 190
>gi|18267033|sp|P54414|CLPP_PARDE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 199
Score = 137 bits (346), Expect = 8e-31, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
V V G I D +A A LL L AE+ + I++ I+SPGG V +G I+D ++FI+P +
Sbjct: 33 VIVAGPITDKLAQRTVAHLLAL-AEDSDEPINMLISSPGGHVESGDMIHDVIKFIRPTVR 91
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T + AS G+L+ +K R+ LPN R L+HQPS G G ++D+ A+ + ++ R
Sbjct: 92 TIGLAWVASAGALIFVGADKENRYCLPNTRFLIHQPSVGIGGTSTDMMIQAEQVRLMRDR 151
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
LN+I+ + G+ E +EK RD ++ EA D+G++ KV+ S +++
Sbjct: 152 LNQIFAEATGQPVERIEKDTQRDFWLNTQEALDYGLLGKVIRSVDELK 199
>gi|283050465|gb|ADB07630.1| ATP-dependent Clp protease proteolytic subunit [Leersia oryzoides]
gi|283050469|gb|ADB07633.1| ATP-dependent Clp protease proteolytic subunit [Leersia perrieri]
gi|283050473|gb|ADB07636.1| ATP-dependent Clp protease proteolytic subunit [Leersia hexandra]
gi|283050481|gb|ADB07642.1| ATP-dependent Clp protease proteolytic subunit [Maltebrunia
letestui]
gi|283050485|gb|ADB07645.1| ATP-dependent Clp protease proteolytic subunit [Prosphytochloa
prehensilis]
Length = 191
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRSEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMVTRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|315281892|ref|ZP_07870418.1| Clp protease [Listeria marthii FSL S4-120]
gi|313614464|gb|EFR88082.1| Clp protease [Listeria marthii FSL S4-120]
Length = 190
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A +K RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAKKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + K G++YE++ K DR+ +S +EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAKATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK 190
>gi|1002866|gb|AAC44552.1| ClpP [Paracoccus denitrificans]
Length = 211
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 101/168 (60%), Gaps = 1/168 (0%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
V V G I D +A A LL L AE+ + I++ I+SPGG V +G I+D ++FI+P +
Sbjct: 45 VIVAGPITDKLAQRTVAHLLAL-AEDSDEPINMLISSPGGHVESGDMIHDVIKFIRPTVR 103
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T + AS G+L+ +K R+ LPN R L+HQPS G G ++D+ A+ + ++ R
Sbjct: 104 TIGLAWVASAGALIFVGADKENRYCLPNTRFLIHQPSVGIGGTSTDMMIQAEQVRLMRDR 163
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
LN+I+ + G+ E +EK RD ++ EA D+G++ KV+ S +++
Sbjct: 164 LNQIFAEATGQPVERIEKDTQRDFWLNTQEALDYGLLGKVIRSVDELK 211
>gi|283050505|gb|ADB07660.1| ATP-dependent Clp protease proteolytic subunit [Zizania latifolia]
Length = 191
Score = 137 bits (346), Expect = 9e-31, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 100/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I +A I +++L E+ +I L+INSPGG + +GMA++DTMQ
Sbjct: 2 MYRERTLFLGQEIRSEIANHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAVFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI++HQP+ + + + ++
Sbjct: 62 VTPDIYTICLGMAASMASFILLGGEPTKRIAFPHARIMIHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ KI+ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKIREMVTRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|15605158|ref|NP_219943.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis D/UW-3/CX]
gi|76789165|ref|YP_328251.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|237802858|ref|YP_002888052.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/Jali20/OT]
gi|237804780|ref|YP_002888934.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255311239|ref|ZP_05353809.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276]
gi|255317541|ref|ZP_05358787.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 6276s]
gi|255348798|ref|ZP_05380805.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70]
gi|255503338|ref|ZP_05381728.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis 70s]
gi|6840804|sp|P38002|CLPP1_CHLTR RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|92087002|sp|Q3KLR9|CLPP1_CHLTA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|3328861|gb|AAC68028.1| CLP Protease [Chlamydia trachomatis D/UW-3/CX]
gi|76167695|gb|AAX50703.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis A/HAR-13]
gi|231273080|emb|CAX09993.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/TZ1A828/OT]
gi|231274092|emb|CAX10886.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis B/Jali20/OT]
gi|296435954|gb|ADH18128.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9768]
gi|296436881|gb|ADH19051.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11222]
gi|296437815|gb|ADH19976.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/11074]
gi|297140315|gb|ADH97073.1| ATP-dependent Clp protease proteolytic subunit [Chlamydia
trachomatis G/9301]
Length = 192
Score = 137 bits (345), Expect = 9e-31, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 122/203 (60%), Gaps = 14/203 (6%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + V+++ +LL R +F + + + AT +L +LE N
Sbjct: 2 PEGEMMHKLQDVIDR------------KLLDSRRIFFSEPVTEKSATEAIKKLWYLELTN 49
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + I INSPGG V AG A++D ++ I P++T G AASMGS+L G RFA
Sbjct: 50 PGQPIVFVINSPGGSVDAGFAVWDQIKMISSPLTTVVTGLAASMGSVLSLCAVPGRRFAT 109
Query: 131 PNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P+ARI++HQPS +GQA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD
Sbjct: 110 PHARIMIHQPSIGGTITGQATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDM 169
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
MSA+EA ++G++D +L S D+
Sbjct: 170 WMSANEAMEFGLLDGILFSFNDL 192
>gi|260905351|ref|ZP_05913673.1| Endopeptidase Clp [Brevibacterium linens BL2]
Length = 219
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 64/174 (36%), Positives = 95/174 (54%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L R V G++ D I ++L+ L AE+ +I L+INSPGG V AI D ++
Sbjct: 40 LYAYRSVVFNGELRDENGMEIISRLILLSAEDSHSDIHLWINSPGGSVPMMHAIADVIET 99
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ + T G AAS G +L G G R ALP+ARILLHQ S G G A+DIE + D+
Sbjct: 100 LPNDVVTVAFGWAASAGQFVLMMGTPGKRLALPHARILLHQGSSGIGGAAADIELQSGDL 159
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++ + + GKTYE V + RD + +A D+G++D+++ S D+
Sbjct: 160 RTVRDTVLHRIAEATGKTYERVFEDSLRDRWFTVEQALDYGLIDRIVESPADLR 213
>gi|46907356|ref|YP_013745.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes str. 4b F2365]
gi|47091939|ref|ZP_00229733.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|254852989|ref|ZP_05242337.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL R2-503]
gi|254932981|ref|ZP_05266340.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes HPB2262]
gi|254994469|ref|ZP_05276659.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-064]
gi|300764285|ref|ZP_07074279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|46880623|gb|AAT03922.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes serotype 4b str. F2365]
gi|47019655|gb|EAL10394.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 4b H7858]
gi|258606332|gb|EEW18940.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL R2-503]
gi|293584539|gb|EFF96571.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes HPB2262]
gi|300514937|gb|EFK41990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes FSL N1-017]
gi|328466729|gb|EGF37855.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 1816]
gi|328475174|gb|EGF45955.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 220]
Length = 190
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK 190
>gi|255639455|gb|ACU20022.1| unknown [Glycine max]
Length = 364
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 24/224 (10%)
Query: 2 SFEGCAKKDSEDVFLGLVPMVVEQTNRGERSY--------DIYSRLLKERIVFVTGQIED 53
S G K D+ + + RG R D+ S LL RI ++ I
Sbjct: 117 SLSGMGKSDASKYSMSV------SMYRGGRGTGRPKTAPPDLPSLLLDARICYLGMPIVP 170
Query: 54 HMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIYDTMQFIKPPIS 104
+ LI AQ ++L+ +NP K I LYINS G G T +I D M ++K +
Sbjct: 171 AVTELIVAQFMWLDYDNPSKPIYLYINSSGTLNEKNETVGSETEAYSIADMMSYVKADVY 230
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGGFSGQASDIERHAQDIVKIKR 163
T G A ++LLS G KG R PN+ L SG D+ A+++
Sbjct: 231 TVNCGMAFGQAAMLLSLGTKGYRAVQPNSSTKLYLPKVNRSSGAVIDMWIKAKELEANTE 290
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
E+ K GK+ EE+ K + R + A +A D+G+ DK++ S
Sbjct: 291 YYIELLAKGTGKSKEEIAKDVQRPKYLQAQDAIDYGIADKIIDS 334
>gi|9968665|emb|CAC06126.1| putative ATP-dependent clp serine protease proteolytic subunit
[Pisum sativum]
Length = 246
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/170 (37%), Positives = 100/170 (58%), Gaps = 4/170 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P V+ T G + D+ S L + RI+F+ I MA + +QL+ L +P +I
Sbjct: 80 PISPAVM--TPGG--AIDLSSVLFRNRIIFIGQPINAQMAQRVISQLVTLATIDPDADIL 135
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN GG + +A+YD M +IKP + T C G AAS +LLL+ GEKGMR+++PNARI+
Sbjct: 136 MYINCAGGSTYSVLAVYDCMSWIKPKVGTVCFGVAASQATLLLAGGEKGMRYSMPNARIM 195
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
+ QP GF G D++R + V+ + +++ ++ G E V++ DR
Sbjct: 196 MGQPRCGFGGHVEDVKRLVNEAVQSRHKMDNMFSAFTGLPIETVQEYTDR 245
>gi|161899169|ref|XP_001712811.1| Clp protease [Bigelowiella natans]
gi|75756304|gb|ABA27199.1| Clp protease [Bigelowiella natans]
Length = 264
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 103/184 (55%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
DI +F TG+I D + + +LFL ++ I L INSPGG + AG+A+
Sbjct: 57 LDISDFFENNNFLFCTGEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLAL 116
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD + + +T +G AASMG+ LL++G G+RF+ PN RI++HQP GG G A DIE
Sbjct: 117 YDAIVWTNKSTNTISLGLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIE 176
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ + +N + K ++ +E DRD M+ EA ++G++D+VL R +
Sbjct: 177 IQVKELLYHRNNINYLLSKFTDQSLSMIESDTDRDKYMTPLEAKEYGIIDRVLNCRDSFK 236
Query: 213 EKSK 216
K
Sbjct: 237 PSIK 240
>gi|219673992|ref|YP_002456477.1| clp protease proteolytic subunit [Trifolium subterraneum]
gi|193788961|gb|ACF20557.1| clp protease proteolytic subunit [Trifolium subterraneum]
Length = 199
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y L +ER++F+ ++ ++ + +++L ++ K++ L+INSPGG + +GMA
Sbjct: 20 WVDLYHLLYEERLLFLGQEVNSEISNQLNGLMVYLSLQDKTKDLYLFINSPGGELMSGMA 79
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS-D 150
++DTMQF+K + T C+G A SM SLLL GE R A +AR+++H+P+ F + +
Sbjct: 80 MFDTMQFVKAEVQTVCVGIAVSMASLLLLGGEITKRLAFSHARVMMHEPASVFEDDKTGE 139
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A +++K+ + IYV+ GK ++ + RD MSA EA +G+VD V
Sbjct: 140 CMLEADELLKMYIGIINIYVQRTGKPVWQIAVDIKRDIFMSAEEAQAYGIVDMV 193
>gi|297748561|gb|ADI51107.1| hypothetical protein CTDEC_0431 [Chlamydia trachomatis D-EC]
gi|297749441|gb|ADI52119.1| hypothetical protein CTDLC_0431 [Chlamydia trachomatis D-LC]
Length = 196
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 122/203 (60%), Gaps = 14/203 (6%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
E + + V+++ +LL R +F + + + AT +L +LE N
Sbjct: 6 PEGEMMHKLQDVIDR------------KLLDSRRIFFSEPVTEKSATEAIKKLWYLELTN 53
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + I INSPGG V AG A++D ++ I P++T G AASMGS+L G RFA
Sbjct: 54 PGQPIVFVINSPGGSVDAGFAVWDQIKMISSPLTTVVTGLAASMGSVLSLCAVPGRRFAT 113
Query: 131 PNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P+ARI++HQPS +GQA+D++ HA++I+K K R+ ++YV+ G++ E +EK +DRD
Sbjct: 114 PHARIMIHQPSIGGTITGQATDLDIHAREILKTKARIIDVYVEATGQSREVIEKAIDRDM 173
Query: 189 IMSASEACDWGVVDKVLMSRIDI 211
MSA+EA ++G++D +L S D+
Sbjct: 174 WMSANEAMEFGLLDGILFSFNDL 196
>gi|221217874|ref|ZP_03589341.1| Clp protease [Borrelia burgdorferi 72a]
gi|225549932|ref|ZP_03770893.1| Clp protease [Borrelia burgdorferi 118a]
gi|221192180|gb|EEE18400.1| Clp protease [Borrelia burgdorferi 72a]
gi|225369391|gb|EEG98843.1| Clp protease [Borrelia burgdorferi 118a]
Length = 198
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/177 (38%), Positives = 109/177 (61%), Gaps = 1/177 (0%)
Query: 38 RL-LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
RL LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ +
Sbjct: 18 RLVLKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMI 77
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+F+KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE +
Sbjct: 78 RFVKPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTN 137
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++ K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 138 ELNKVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQLEE 194
>gi|16803178|ref|NP_464663.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes EGD-e]
gi|47094980|ref|ZP_00232593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|224502566|ref|ZP_03670873.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL R2-561]
gi|254828498|ref|ZP_05233185.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL N3-165]
gi|254830108|ref|ZP_05234763.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 10403S]
gi|254898700|ref|ZP_05258624.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes J0161]
gi|254911811|ref|ZP_05261823.1| ATP-dependent Clp protease [Listeria monocytogenes J2818]
gi|254936136|ref|ZP_05267833.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|255026166|ref|ZP_05298152.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-003]
gi|284801459|ref|YP_003413324.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284994601|ref|YP_003416369.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|16410554|emb|CAC99216.1| lmo1138 [Listeria monocytogenes EGD-e]
gi|47016598|gb|EAL07518.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Listeria
monocytogenes str. 1/2a F6854]
gi|258600894|gb|EEW14219.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL N3-165]
gi|258608725|gb|EEW21333.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes F6900]
gi|284057021|gb|ADB67962.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5578]
gi|284060068|gb|ADB71007.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes 08-5923]
gi|293589764|gb|EFF98098.1| ATP-dependent Clp protease [Listeria monocytogenes J2818]
Length = 190
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK 190
>gi|32307600|gb|AAP79205.1| ClpP protease [Bigelowiella natans]
Length = 260
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/184 (35%), Positives = 103/184 (55%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
DI +F TG+I D + + +LFL ++ I L INSPGG + AG+A+
Sbjct: 53 LDISDFFENNNFLFCTGEINDQLVNSLINSILFLSYKDNNSSIKLCINSPGGSIMAGLAL 112
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
YD + + +T +G AASMG+ LL++G G+RF+ PN RI++HQP GG G A DIE
Sbjct: 113 YDAIVWTNKSTNTISLGLAASMGAFLLASGTNGLRFSTPNTRIMIHQPIGGIQGNAVDIE 172
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++++ + +N + K ++ +E DRD M+ EA ++G++D+VL R +
Sbjct: 173 IQVKELLYHRNNINYLLSKFTDQSLSMIESDTDRDKYMTPLEAKEYGIIDRVLNCRDSFK 232
Query: 213 EKSK 216
K
Sbjct: 233 PSIK 236
>gi|313609325|gb|EFR84959.1| Clp protease [Listeria monocytogenes FSL F2-208]
Length = 190
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 111/175 (63%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S EA D+G+V +++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVKEAKDYGIVSEIIENRDGLK 190
>gi|224500753|ref|ZP_03669102.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes Finland 1988]
Length = 190
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK 190
>gi|302773329|ref|XP_002970082.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
gi|300162593|gb|EFJ29206.1| hypothetical protein SELMODRAFT_65351 [Selaginella moellendorffii]
Length = 300
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RIV++ I + LI A++LFL+ +NP K I LYIN G G
Sbjct: 115 DLPSLLLDARIVYLGMAIVPAVTELIVAEMLFLDFDNPSKPIYLYINCSGTQNEKKESVG 174
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DTM ++K + T G A ++LLS GEKG R P++ L
Sbjct: 175 FETEAYAIADTMSYVKSKVYTVNCGMAFGQAAMLLSVGEKGFRAVQPSSSTKLYAPKVNQ 234
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG A D+ A+++ + ++ K GK EE+ K + R A EA ++G+ DK
Sbjct: 235 SSGSAIDMFIKAKELDSNTKYYIDLLAKGTGKPEEEIAKDIQRPKYFKAKEAVEYGLADK 294
Query: 204 VLM 206
V+
Sbjct: 295 VIE 297
>gi|283050501|gb|ADB07657.1| ATP-dependent Clp protease proteolytic subunit [Zizania aquatica]
Length = 191
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I +A I +++L E+ +I L+INSPGG + +GM ++DTMQ
Sbjct: 2 MYRERTLFLGQEIRSEIANHITGLMVYLSIEDGISDIFLFINSPGGWLISGMGVFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI++HQP+ + + + ++
Sbjct: 62 VTPDIYTICLGMAASMASFILLGGEPTKRIAFPHARIMIHQPASAYYRTRTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ KI+ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKIREMVTRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|323148854|ref|YP_004221946.1| clp protease proteolytic subunit [Erodium carvifolium]
gi|316926318|gb|ADU58171.1| clp protease proteolytic subunit [Erodium carvifolium]
Length = 197
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 64/195 (32%), Positives = 115/195 (58%), Gaps = 5/195 (2%)
Query: 19 VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP V Q++ E D+Y+RL +ERI+F+ +I++ ++ + + ++FL+ +N +
Sbjct: 5 VPKVSFQSHEEEDATWIDLYNRLYRERILFLCREIKEELSNNLVSLMVFLDIDNTTWTQT 64
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
++I+SPGG V G+A+YDT+ + T C G AASM S++L GE+ R A P+AR++
Sbjct: 65 MFIHSPGGFVFPGLAVYDTVLAVGAR--TVCAGIAASMASVVLIGGEQSKRLAFPHARVM 122
Query: 137 LHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP F S+I + ++ ++ R+ +YV+ G+ + + L+ D MSA EA
Sbjct: 123 VHQPRMKDFEDSTSEILMETRVLLDLRERITHLYVQRTGQPHRIIAADLEVDTYMSAKEA 182
Query: 196 CDWGVVDKVLMSRID 210
+G++D + S +
Sbjct: 183 VTYGIIDAIAQSVEE 197
>gi|84996251|ref|XP_952847.1| CLP protease [Theileria annulata strain Ankara]
gi|65303845|emb|CAI76222.1| CLP protease, putative [Theileria annulata]
Length = 271
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 81/249 (32%), Positives = 128/249 (51%), Gaps = 51/249 (20%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLL-----KERIVFVTGQIEDHMAT 57
+ + + + L + EQ Y++LL K RI+F++G++ D ++
Sbjct: 29 YTKSLFINKINTYNNLYNSIDEQKES-------YNKLLDEFYIKNRIIFLSGELNDKVSF 81
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGM--------------AIYDTMQFIKPPI 103
I + +L + +P+ I YINSPGG VT+G AI+D ++ +K P+
Sbjct: 82 KIISSILRINENDPKLPIKFYINSPGGSVTSGNFITQFLHTLFFLGLAIFDILRSLKMPV 141
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP----------------------- 140
T +GQAASMG+ LL++G KGMR+A+PN+RI++HQP
Sbjct: 142 ETISLGQAASMGAFLLASGTKGMRYAMPNSRIMIHQPLGTLRCSVTVLAPAAPIITNPPK 201
Query: 141 --SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
G GQASDIE A +I++I+ LN GK+ EE+EK RD+ M SEA +
Sbjct: 202 GLYRGAHGQASDIEIQANEILQIREILNTNLSNFTGKSVEEIEKDCSRDNYMRPSEALQY 261
Query: 199 GVVDKVLMS 207
G++D ++ +
Sbjct: 262 GLIDHIINT 270
>gi|195941577|ref|ZP_03086959.1| ATP-dependent Clp protease proteolytic subunit [Borrelia
burgdorferi 80a]
gi|216264605|ref|ZP_03436597.1| Clp protease [Borrelia burgdorferi 156a]
gi|224532594|ref|ZP_03673216.1| Clp protease [Borrelia burgdorferi WI91-23]
gi|224533365|ref|ZP_03673959.1| Clp protease [Borrelia burgdorferi CA-11.2a]
gi|225548857|ref|ZP_03769834.1| Clp protease [Borrelia burgdorferi 94a]
gi|225551857|ref|ZP_03772800.1| Clp protease [Borrelia sp. SV1]
gi|226320740|ref|ZP_03796297.1| Clp protease [Borrelia burgdorferi 29805]
gi|215981078|gb|EEC21885.1| Clp protease [Borrelia burgdorferi 156a]
gi|224512450|gb|EEF82829.1| Clp protease [Borrelia burgdorferi WI91-23]
gi|224513530|gb|EEF83887.1| Clp protease [Borrelia burgdorferi CA-11.2a]
gi|225370460|gb|EEG99896.1| Clp protease [Borrelia burgdorferi 94a]
gi|225371652|gb|EEH01079.1| Clp protease [Borrelia sp. SV1]
gi|226233852|gb|EEH32576.1| Clp protease [Borrelia burgdorferi 29805]
gi|312148239|gb|ADQ30898.1| Clp protease [Borrelia burgdorferi JD1]
gi|312149694|gb|ADQ29765.1| Clp protease [Borrelia burgdorferi N40]
Length = 198
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 107/174 (61%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KVKKELNNIISKETGQKISKIEKDTDRDFWLDSSAAKKYGLVFEVVETKYQLEE 194
>gi|284029223|ref|YP_003379154.1| endopeptidase Clp [Kribbella flavida DSM 17836]
gi|283808516|gb|ADB30355.1| Endopeptidase Clp [Kribbella flavida DSM 17836]
Length = 206
Score = 137 bits (344), Expect = 1e-30, Method: Composition-based stats.
Identities = 70/193 (36%), Positives = 112/193 (58%), Gaps = 9/193 (4%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+PM EQ +LL+ R+V + GQ+ D TLI Q+L L AE+P+ +++L+
Sbjct: 7 MPMFGEQARL---------QLLRRRVVVLDGQLNDDNGTLIATQILTLAAEDPETDVALW 57
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
I+S GG V + +AI D M+ + ++T +G A S G LLSAG KG R+ALP+AR+L+H
Sbjct: 58 IHSLGGSVPSMLAIRDVMRLVPCDVATVALGLACSAGQFLLSAGTKGKRYALPHARVLMH 117
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
Q S G G A +IE A D+ I+ + + ++ G+ E V + DH +A +A ++
Sbjct: 118 QGSAGIGGSAVEIEIQANDLRHIRDTVLRLVAEDTGQPLETVYEDSLHDHWYTAEQALEY 177
Query: 199 GVVDKVLMSRIDI 211
G +D ++ S +
Sbjct: 178 GFIDHLVGSFDQV 190
>gi|283050453|gb|ADB07621.1| ATP-dependent Clp protease proteolytic subunit [Oryza ridleyi]
Length = 191
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|289434382|ref|YP_003464254.1| ATP-dependent Clp protease, proteolytic subunit, ClpP family
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|289170626|emb|CBH27166.1| ATP-dependent Clp protease, proteolytic subunit, ClpP family
[Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313633774|gb|EFS00515.1| Clp protease [Listeria seeligeri FSL N1-067]
Length = 190
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISDE-PITVFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G+TYE++ K DR+ +S +EA D+G+V +++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQTYEKISKDTDRNFWLSVNEAKDYGIVSEIIENRDGLK 190
>gi|219684459|ref|ZP_03539403.1| Clp protease [Borrelia garinii PBr]
gi|219685608|ref|ZP_03540424.1| Clp protease [Borrelia garinii Far04]
gi|219672448|gb|EED29501.1| Clp protease [Borrelia garinii PBr]
gi|219672886|gb|EED29909.1| Clp protease [Borrelia garinii Far04]
Length = 198
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 106/174 (60%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ +EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KVKKELNSIISKETGQDISTIEKDTDRDFWLDSSAAKKYGLVFEVVETKWQLEE 194
>gi|308807867|ref|XP_003081244.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
gi|116059706|emb|CAL55413.1| ATP-dependent Clp protease proteolytic subunit 3 (ISS)
[Ostreococcus tauri]
Length = 335
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT------ 87
D+ S LL RI ++ + + L+ A+LL+L E +K +YINS G +
Sbjct: 103 DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSINEKGEVVG 162
Query: 88 ---AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GG 143
AI DTM++I+ PI T +G+ SL+L+ G+KG R ALP+ +I P
Sbjct: 163 MDNEAYAILDTMRYIRSPIHTVAVGKCHGNASLILAGGDKGRRHALPHVQISTGPPKLNR 222
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+++ A + + ++ + GK E V K LDR + ++A ++G++DK
Sbjct: 223 TFDSTQNVQIRANECAMYEDTYMDLMAEYTGKDGETVRKDLDRTRYFTPNQAIEYGIIDK 282
Query: 204 VLMS 207
V+
Sbjct: 283 VITK 286
>gi|217964793|ref|YP_002350471.1| Clp protease [Listeria monocytogenes HCC23]
gi|290894308|ref|ZP_06557274.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|217334063|gb|ACK39857.1| Clp protease [Listeria monocytogenes HCC23]
gi|290556127|gb|EFD89675.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J2-071]
gi|307570646|emb|CAR83825.1| ATP-dependent Clp protease, proteolytic subunit [Listeria
monocytogenes L99]
Length = 190
Score = 136 bits (343), Expect = 2e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V +++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEQISKDTDRNFWLSVNEAKDYGIVSEIIENRDGLK 190
>gi|313635706|gb|EFS01800.1| Clp protease [Listeria seeligeri FSL S4-171]
Length = 190
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISDE-PITVFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G+TYE++ K DR+ +S +EA D+G+V +++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQTYEKISKDTDRNFWLSVNEAKDYGIVSEIIENRDGLK 190
>gi|283050524|gb|ADB07674.1| ATP-dependent Clp protease proteolytic subunit [Hygroryza aristata]
Length = 191
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 63/173 (36%), Positives = 101/173 (58%), Gaps = 1/173 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V +D
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIVGDEMVD 174
>gi|168013355|ref|XP_001759365.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689295|gb|EDQ75667.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 11/176 (6%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMA 91
RIV++ + + L+ A+LL+L+ +P++ I +YINS G G+ T G A
Sbjct: 82 NSRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTARADGETVGLETEGFA 141
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--AS 149
IYDT+ ++ I T +G A LLL++G+KGMR+ +P+A ++ QP +GQ A
Sbjct: 142 IYDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQPRLPSTGQMSAI 201
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
D+ A++++ + L + K+ G E+V K ++R M+ +A D+GV DK+L
Sbjct: 202 DVHIRAKELINNRDTLVGLLAKHTGNPVEKVAKVMERPFYMNPKKAVDFGVADKIL 257
>gi|283050405|gb|ADB07585.1| ATP-dependent Clp protease proteolytic subunit [Oryza rufipogon]
gi|283050409|gb|ADB07588.1| ATP-dependent Clp protease proteolytic subunit [Oryza glaberrima]
gi|283050413|gb|ADB07591.1| ATP-dependent Clp protease proteolytic subunit [Oryza meridionalis]
gi|283050425|gb|ADB07600.1| ATP-dependent Clp protease proteolytic subunit [Oryza officinalis]
gi|283050429|gb|ADB07603.1| ATP-dependent Clp protease proteolytic subunit [Oryza punctata]
gi|283050433|gb|ADB07606.1| ATP-dependent Clp protease proteolytic subunit [Oryza rhizomatis]
gi|283050437|gb|ADB07609.1| ATP-dependent Clp protease proteolytic subunit [Oryza latifolia]
gi|283050441|gb|ADB07612.1| ATP-dependent Clp protease proteolytic subunit [Oryza
australiensis]
gi|283050445|gb|ADB07615.1| ATP-dependent Clp protease proteolytic subunit [Oryza coarctata]
Length = 191
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|256391236|ref|YP_003112800.1| endopeptidase Clp [Catenulispora acidiphila DSM 44928]
gi|256357462|gb|ACU70959.1| Endopeptidase Clp [Catenulispora acidiphila DSM 44928]
Length = 201
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 69/178 (38%), Positives = 102/178 (57%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
L RIV + G ++D TL+ QLL L E+P+ ISL+I+SPGG V A +AI D M+
Sbjct: 18 LFSRRIVVMDGVLDDDNGTLLATQLLSLATEDPEAGISLWIHSPGGSVPAMLAIRDVMRL 77
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ +ST +G A S G LLSAG G RFALP++RIL+HQ S G G A D+E A D+
Sbjct: 78 VPCEVSTLALGLACSAGQFLLSAGAHGRRFALPHSRILMHQGSAGIGGSAVDVEVQADDL 137
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ + + + G+ Y+ V + D +A +A D+G +D ++ S + + K
Sbjct: 138 RHMVNTVLGLIAADTGQPYDRVFEDSLHDRWFTARQAKDYGFIDHIVDSFAQVVPERK 195
>gi|283050509|gb|ADB07663.1| ATP-dependent Clp protease proteolytic subunit [Rhynchoryza
subulata]
Length = 191
Score = 136 bits (342), Expect = 2e-30, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILVGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|224534499|ref|ZP_03675075.1| Clp protease [Borrelia spielmanii A14S]
gi|224514176|gb|EEF84494.1| Clp protease [Borrelia spielmanii A14S]
Length = 198
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 107/174 (61%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KLKKELNNIISKETGQNISKIEKDTDRDFWLDSSSAKKYGLVFEVVETKCQLEE 194
>gi|325972142|ref|YP_004248333.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta sp.
Buddy]
gi|324027380|gb|ADY14139.1| ATP-dependent Clp protease proteolytic subunit [Spirochaeta sp.
Buddy]
Length = 191
Score = 136 bits (342), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/177 (38%), Positives = 105/177 (59%), Gaps = 1/177 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I +LLK R + ++G+I A ++ QLL LE E+ + I ++INSPGG V AG AI+D
Sbjct: 16 IQEKLLKTRSILLSGEINKETAEVMIKQLLVLEGESNE-PIKIFINSPGGDVDAGYAIFD 74
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
+FI P++ MG AS +L+L A R ALPN+ L+HQP G G A+DIE H
Sbjct: 75 MARFITAPVTMIGMGLVASAAALVLLAVPVERRIALPNSTYLIHQPMSGMRGVATDIEIH 134
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
A + K++ +L+ + GK+ E+V +RDH ++A EA +G+V ++ R +
Sbjct: 135 ALHLEKLRLKLDALIAAETGKSAEDVRLDTERDHWLTAEEAKAYGLVSNIVSHRSKL 191
>gi|313624155|gb|EFR94223.1| Clp protease [Listeria innocua FSL J1-023]
Length = 190
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + + I++++NS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISDE-PITIFVNSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A +K R++LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAADKENRYSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R I+
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIQNRDGIK 190
>gi|168025572|ref|XP_001765308.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683627|gb|EDQ70036.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 298
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 11/175 (6%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + L+ A+LL+L+ +P++ I +YINS G T G AI
Sbjct: 85 SRIVYIGMPLVPAVTELVIAELLYLQYADPRQPIYVYINSTGTSRADGETVGLETEGFAI 144
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASD 150
YDT+ ++ I T +G A LLL++G+KGMR+ +P+A ++ QP +GQ A D
Sbjct: 145 YDTLMNVRNQIQTVAVGAAIGQACLLLASGDKGMRYMMPHATAMIQQPRLPSTGQMSAID 204
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ A++++ + L + K+ G YE+V K + R M+ +A ++GV DK+L
Sbjct: 205 VHIRAKELINNRDTLVGLLAKHTGNPYEKVAKVMQRPFYMNPKKAVEFGVADKIL 259
>gi|226223740|ref|YP_002757847.1| ATP-dependent Clp protease proteolytic component [Listeria
monocytogenes Clip81459]
gi|225876202|emb|CAS04911.1| Putative ATP-dependent Clp protease proteolytic component [Listeria
monocytogenes serotype 4b str. CLIP 80459]
Length = 190
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 114/175 (65%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + + I++++NS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISDE-PITIFVNSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A +K R++LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAADKENRYSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R I+
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIQNRDGIK 190
>gi|290489442|gb|ADD31105.1| clp protease proteolytic subunit protein [Lonicera japonica]
Length = 216
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/199 (29%), Positives = 107/199 (53%), Gaps = 4/199 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP + Q + E D+Y+ L + +F+ +I+ ++ I ++FL E
Sbjct: 1 MPVGVPKIPFQISGDEEASWVDVYNGLYRRGFLFIVQEIDTELSNQIVGLMVFLSLEGEV 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
++ +I+S GG + G AI+D + ++ P + T +G+ ASM SL+++ G R A P+
Sbjct: 61 NDLYFFISSLGGSMVDGFAIFDMLVYLPPTMHTLSIGECASMASLIVAGGTFTQRIAFPH 120
Query: 133 ARILLHQPS-GGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+RI++HQP+ F + ++ +++ + E Y K G+ VE L+RD MS
Sbjct: 121 SRIMIHQPNTFPFETPTGETFLEIKEFCRLRALVGEAYAKITGQPLWVVEIDLERDIFMS 180
Query: 192 ASEACDWGVVDKVLMSRID 210
A EA D+G+VD V +++
Sbjct: 181 AQEAKDYGIVDLVASGKLE 199
>gi|224531790|ref|ZP_03672422.1| Clp protease [Borrelia valaisiana VS116]
gi|224511255|gb|EEF81661.1| Clp protease [Borrelia valaisiana VS116]
Length = 198
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 65/174 (37%), Positives = 106/174 (60%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ ++EK DRD + + A +G+V +V+ ++ +EE
Sbjct: 141 KVKKELNNIISKETGQKISKIEKDTDRDFWLDSGAAKKYGLVFEVVETKCQLEE 194
>gi|229815654|ref|ZP_04445981.1| hypothetical protein COLINT_02705 [Collinsella intestinalis DSM
13280]
gi|229808884|gb|EEP44659.1| hypothetical protein COLINT_02705 [Collinsella intestinalis DSM
13280]
Length = 199
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/194 (34%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P ++ +T+RG IY LL+ER + ++G+IE MA+ +C +LFLE E+P I+L++
Sbjct: 8 PSILRETSRGLERTSIYDELLRERTLVISGEIEPLMASALCQHVLFLEREDPSSPITLFV 67
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
+SPGG V G+AIYD ++ + PI T C AASMGS++ AG++ R P+A +++H
Sbjct: 68 SSPGGQVGPGLAIYDVLRSVSCPIRTVCGDLAASMGSIIFMAGDE--REMYPHASLMIHD 125
Query: 140 P--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P G G A ++ ++ +++ +R LN I + G + ++ +D + A A D
Sbjct: 126 PLIPQGAGGSALALQETSKRLMERRRTLNTILAERSGLALKRIQSLTCKDTYLEAERALD 185
Query: 198 WGVVDKVLMSRIDI 211
G +++ SR ++
Sbjct: 186 LGFATRIIESRKEL 199
>gi|218176265|ref|YP_002364522.1| clp protease proteolytic subunit [Festuca arundinacea]
gi|215882349|gb|ACJ70779.1| clp protease proteolytic subunit [Festuca arundinacea]
Length = 214
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 69/193 (35%), Positives = 109/193 (56%), Gaps = 6/193 (3%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+ + +ER +F GQ + I +++L E+
Sbjct: 1 MPMGVPKVPYRIPGDEEATGVDLYNVMYRERTLF--GQRRCEITNHITVLMVYLSIEDGI 58
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+I L+INSPGG + +GMAI+DTMQ + P I T C+G AASM S +L GE R A P+
Sbjct: 59 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 118
Query: 133 ARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
ARI+LHQP+ + + +++ K++ + +Y GK + V + ++RD MS
Sbjct: 119 ARIMLHQPASAYYRAGTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 178
Query: 192 ASEACDWGVVDKV 204
A EA +G+VD V
Sbjct: 179 ADEAKAYGLVDIV 191
>gi|262201604|ref|YP_003272812.1| endopeptidase Clp [Gordonia bronchialis DSM 43247]
gi|262084951|gb|ACY20919.1| Endopeptidase Clp [Gordonia bronchialis DSM 43247]
Length = 231
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 66/162 (40%), Positives = 95/162 (58%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+RI+ + ++D + + +CAQ++ L E+P +I+L+INSPGG V A +AI DTM+ I
Sbjct: 48 QRILLLDTALDDEIGSELCAQMVLLSVEDPVADIALWINSPGGSVPAMLAIMDTMRLIPN 107
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I T +G A S G LL G G RF LP+A++LLHQ S G G A DIE A D+ +
Sbjct: 108 DIRTVNLGMAYSAGQFLLCCGTAGKRFILPHAKVLLHQGSAGIGGYAPDIELQADDLRHV 167
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ + I + G+ E V RDH+ +A EA +G VD
Sbjct: 168 RDTVLGIIAEQTGQPPERVFDDSLRDHVFTADEAIAYGFVDH 209
>gi|283050449|gb|ADB07618.1| ATP-dependent Clp protease proteolytic subunit [Oryza brachyantha]
gi|283050457|gb|ADB07624.1| ATP-dependent Clp protease proteolytic subunit [Oryza granulata]
gi|283050461|gb|ADB07627.1| ATP-dependent Clp protease proteolytic subunit [Oryza
neocaledonica]
gi|283050493|gb|ADB07651.1| ATP-dependent Clp protease proteolytic subunit [Chikusichloa
aquatica]
gi|283050497|gb|ADB07654.1| ATP-dependent Clp protease proteolytic subunit [Chikusichloa
mutica]
Length = 191
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|110456731|gb|ABG74834.1| ATP-dependent protease catalytic subunit [Jasminum subhumile]
Length = 229
Score = 135 bits (341), Expect = 3e-30, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 103/185 (55%), Gaps = 4/185 (2%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+RL +E ++F+ +I+ ++ I + +L+L +P ++ ++INSPGG + GM
Sbjct: 38 WVDVYTRLYQEGVLFLADEIDSELSNEIISAMLYLNMVDPTQDQYVFINSPGGSILYGMG 97
Query: 92 IYDTMQFIKPP--ISTFCMGQAASMGSLLLSAGEKGMRFALPNAR--ILLHQPSGGFSGQ 147
IYDTM+F+ + T C G A SM SLLL G + R A P+A ++ +
Sbjct: 98 IYDTMEFVSADADVHTICFGVARSMASLLLVGGVENKRMAFPHAIRVMIHQPAVSRIVAR 157
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + R + + +KR + Y + G+ +E+ ++RDH MSA EA +G+VD+++
Sbjct: 158 SKRLLREVEFLKSLKRDIIAEYAERTGQPLWVIERDIERDHFMSAREAKGYGIVDEIVDE 217
Query: 208 RIDIE 212
+E
Sbjct: 218 FPTLE 222
>gi|224284163|gb|ACN39818.1| unknown [Picea sitchensis]
Length = 327
Score = 135 bits (340), Expect = 3e-30, Method: Composition-based stats.
Identities = 59/176 (33%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMA 91
RI+F+ + + L+ A+ L+L+ +P++ +YINS G T G A
Sbjct: 113 NSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFA 172
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--AS 149
IYDTM +K I T G A LLL+AG+KG R+ LP+A++LL QP +GQ A
Sbjct: 173 IYDTMMQMKNEIHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQPRLPATGQMPAI 232
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
D+ A++++ + ++ K+ G +E V K ++R M +A ++GV DK+L
Sbjct: 233 DVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFYMFPRQAVEFGVADKIL 288
>gi|254823607|ref|ZP_05228608.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-194]
gi|255522304|ref|ZP_05389541.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-175]
gi|293592830|gb|EFG00591.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-194]
Length = 190
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISNDS-ITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R ++
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLK 190
>gi|332040877|gb|EGI77248.1| endopeptidase Clp [Hylemonella gracilis ATCC 19624]
Length = 205
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 58/172 (33%), Positives = 99/172 (57%), Gaps = 1/172 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K R + V G + D MA + +L+ L+A + + I L ++SPGG + +G AI+D ++FI
Sbjct: 34 FKTRTLLVFGTVTDAMAADVTRRLIALDA-DGDQPIHLLVSSPGGHLESGDAIHDIVRFI 92
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++ G S + L A + R+ LPN R L+HQPSGG G A++I A+++V
Sbjct: 93 AAPVNMIGTGWVGSAATHLYLAVPRARRYCLPNTRFLIHQPSGGAGGPATNIAIQAREMV 152
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
K + R+ + GK+ E V ++ D +SA EA D+G+V +++ + ++
Sbjct: 153 KARERIAATIARETGKSLEAVLTDIEHDRWLSAEEAVDYGLVSRIIERKSEL 204
>gi|283050517|gb|ADB07669.1| ATP-dependent Clp protease proteolytic subunit [Luziola fluitans]
Length = 191
Score = 135 bits (340), Expect = 4e-30, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+AR++LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARVMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|269956965|ref|YP_003326754.1| endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
gi|269305646|gb|ACZ31196.1| Endopeptidase Clp [Xylanimonas cellulosilytica DSM 15894]
Length = 208
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 70/174 (40%), Positives = 106/174 (60%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
L + R++ + G ++D TL+ QL+ L E+P +I+L+I+SPGG V A +AI D ++
Sbjct: 17 ELYERRVLVLDGVLDDDNGTLLATQLVTLAVEDPVADIALWIHSPGGSVPAMLAIRDLIR 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I ++T +G AAS G LLSAG +G R ALP+ARILLHQ S G G A DIE A D
Sbjct: 77 TIPNDVATLALGFAASAGQFLLSAGTRGKRRALPHARILLHQGSAGIGGTAVDIELQADD 136
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ ++ + + ++ G+ E V + DH +A+EA ++G VD ++ S DI
Sbjct: 137 LRHMRDTVLGLIAQDTGQPPERVFEDSLHDHWFTAAEAQEYGFVDTIVGSFADI 190
>gi|283050489|gb|ADB07648.1| ATP-dependent Clp protease proteolytic subunit [Potamophila
parviflora]
Length = 191
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I +INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGISDIFFFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|283050477|gb|ADB07639.1| ATP-dependent Clp protease proteolytic subunit [Leersia
tisserantii]
Length = 191
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 62/167 (37%), Positives = 98/167 (58%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRSEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P ARI+LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPRARIMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMVTRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|307109710|gb|EFN57947.1| hypothetical protein CHLNCDRAFT_11056 [Chlorella variabilis]
Length = 200
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 65/182 (35%), Positives = 107/182 (58%), Gaps = 9/182 (4%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L KERIV+V + + L+ A++L+L+ +NP + I +YINS G G
Sbjct: 17 DLPSYLFKERIVYVGMSLVPAVTELVLAEMLYLQYDNPTRPIYMYINSTGVIKGSGKLGY 76
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+ AIYDTM++IKPP++T C+G A ++LL+AGE G R ALP+ I++ QP ++
Sbjct: 77 ESEAFAIYDTMRYIKPPVATVCVGSAFGEAAMLLAAGEAGRRAALPSTSIMIRQPMQRYT 136
Query: 146 GQ-ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
ASDI+ + ++ K + + K+ G E+V + + R + EA ++G++D+V
Sbjct: 137 QMQASDIDIYRNELRKTNAEVVRLLSKHTGHGEEQVARDISRPKYFNPYEAIEYGIIDRV 196
Query: 205 LM 206
L
Sbjct: 197 LE 198
>gi|302528952|ref|ZP_07281294.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
gi|302437847|gb|EFL09663.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
Length = 194
Score = 135 bits (339), Expect = 5e-30, Method: Composition-based stats.
Identities = 75/146 (51%), Positives = 101/146 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++ RLL+ERIV + ++ D +A + AQLL L+A++ + +I YINSPGG VTAG AIYD
Sbjct: 48 VFERLLQERIVVLGSEVNDEVANRLTAQLLLLDADDAESDIRFYINSPGGSVTAGFAIYD 107
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TMQ I+P ++T+ MG AASMG LLS+G G R+ALP+ARIL+HQPS G G ASDI
Sbjct: 108 TMQLIRPDVATYAMGMAASMGQFLLSSGTPGKRYALPHARILMHQPSAGVGGTASDIAIQ 167
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEV 180
A K K+ L I + G+T E++
Sbjct: 168 ADLFNKWKQELARITAEQTGQTTEQI 193
>gi|224284192|gb|ACN39832.1| unknown [Picea sitchensis]
Length = 327
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 58/176 (32%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMA 91
RI+F+ + + L+ A+ L+L+ +P++ +YINS G T G A
Sbjct: 113 NSRIIFIGMPLVPAVTELVIAEFLYLQWLDPRQPTYVYINSTGTSREDGETVALETEGFA 172
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--AS 149
IYDTM +K + T G A LLL+AG+KG R+ LP+A++LL QP +GQ A
Sbjct: 173 IYDTMMQMKNEMHTVAFGAAVGQACLLLAAGKKGKRYMLPHAQVLLQQPRLPATGQMPAI 232
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
D+ A++++ + ++ K+ G +E V K ++R M +A ++GV DK+L
Sbjct: 233 DVHIRAKELIHNRDTFVKLLAKHTGNPFETVAKAMERPFYMFPRQAVEFGVADKIL 288
>gi|16800172|ref|NP_470440.1| ATP-dependent Clp protease proteolytic subunit [Listeria innocua
Clip11262]
gi|16413562|emb|CAC96334.1| lin1103 [Listeria innocua Clip11262]
Length = 190
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK R++LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKIVGTGWVASAGITIYLAAEKENRYSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R I+
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIQNRDGIK 190
>gi|313619414|gb|EFR91128.1| Clp protease [Listeria innocua FSL S4-378]
Length = 190
Score = 134 bits (338), Expect = 7e-30, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 113/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK R++LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKIVGTGWVASAGITIYLAAEKENRYSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R I+
Sbjct: 136 IIRMRERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIQNRDGIK 190
>gi|68071845|ref|XP_677836.1| ATP-dependent Clp protease proteolytic subunit, [Plasmodium berghei
strain ANKA]
gi|56498101|emb|CAI04312.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium berghei]
Length = 239
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 63/183 (34%), Positives = 106/183 (57%), Gaps = 10/183 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV--------- 85
I S LL +RI+F++ I H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 56 IPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIVNLN 115
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+T ++I D + +I + T+C+G+A + +L S+G+KG RF+L N+ L Q
Sbjct: 116 GITDVISIIDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLKQSYIIP 175
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
QA++IE ++I+ K+++ +I KN K + + LDRD +A+EA D+ ++D +
Sbjct: 176 FNQATNIEIQNKEIMNTKKKVIDIIAKNTEKDNNIISEILDRDRYFNANEASDFNLIDHI 235
Query: 205 LMS 207
L
Sbjct: 236 LEK 238
>gi|51599007|ref|YP_073195.1| ATP-dependent Clp protease proteolytic subunit [Borrelia garinii
PBi]
gi|51573578|gb|AAU07603.1| ATP-dependent Clp protease proteolytic component [Borrelia garinii
PBi]
Length = 198
Score = 134 bits (337), Expect = 8e-30, Method: Composition-based stats.
Identities = 66/174 (37%), Positives = 106/174 (60%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK R + + G+I ++ L ++L LE + +K I +YI+S GG + AG AI++ ++F+
Sbjct: 21 LKSRSIVIAGEITKDVSRLFQEKILLLETLDFKKPIFVYIDSEGGDIDAGFAIFNMIRFV 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
KP + T +G AS +L+ A + RF+LP AR LLHQP GF G A+DIE + ++
Sbjct: 81 KPKVFTVGVGLVASAAALIFLAAKLENRFSLPFARYLLHQPLSGFKGVATDIEIYTNELN 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K+K+ LN I K G+ +EK DRD + +S A +G+V +V+ ++ +EE
Sbjct: 141 KVKKELNNIISKETGQEISTIEKDTDRDFWLDSSAAKKYGLVFEVVETKCQLEE 194
>gi|145350809|ref|XP_001419790.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144580022|gb|ABO98083.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 381
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT------ 87
D+ S LL RI ++ + + L+ A+LL+L E +K +YINS G +
Sbjct: 149 DLPSLLLNARICYIGMSLVPAVTELVVAELLYLGYEQAEKPCYVYINSGGSLNEKGEVVG 208
Query: 88 ---AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GG 143
AI DTM++I+P I T +G+ SL+L+AG+KG R ALP+ +I P
Sbjct: 209 MDNEAYAILDTMRYIRPKIHTVAVGKCHGNASLILAAGDKGCRHALPHVQISTQPPKLNR 268
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+++ A + + + GK + V K LDR + ++A ++G++DK
Sbjct: 269 TFDSTQNVQIRANECALYEDTYMGFMSEFSGKDIDVVRKDLDRTRYFTPNQAIEYGLIDK 328
Query: 204 VLMS 207
V+
Sbjct: 329 VITK 332
>gi|283050513|gb|ADB07666.1| ATP-dependent Clp protease proteolytic subunit [Luziola fluitans]
Length = 191
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 61/167 (36%), Positives = 99/167 (59%), Gaps = 1/167 (0%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ +ER +F+ +I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ
Sbjct: 2 MYRERTLFLGQEIRCEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQT 61
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQD 157
+ P I T C+G AASM S +L GE R A P+AR++LHQP+ + + + ++
Sbjct: 62 VTPDIYTICLGIAASMASFILLGGEPTKRIAFPHARVMLHQPASAYYRARTPEFLLEVEE 121
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K++ + +Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 122 LHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 168
>gi|302817400|ref|XP_002990376.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
gi|302825342|ref|XP_002994294.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300137825|gb|EFJ04638.1| hypothetical protein SELMODRAFT_138455 [Selaginella moellendorffii]
gi|300141938|gb|EFJ08645.1| hypothetical protein SELMODRAFT_131372 [Selaginella moellendorffii]
Length = 235
Score = 134 bits (337), Expect = 9e-30, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMA 91
RIV+V + + L+ A+LL+L+ +P I +YINS G T G A
Sbjct: 21 NSRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFA 80
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--AS 149
I+DTMQ +K I T +G A LLL+AG KG R+ LP+A ++ QP GQ A
Sbjct: 81 IHDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQPRMPSMGQMPAI 140
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
D+ A++++ + L E+ ++ G E+V K + R + MS +A D+GVVDK+L
Sbjct: 141 DLHLRAKEVIHNRDTLVELLAEHTGNPVEKVAKVMRRPYYMSPKKAMDFGVVDKIL 196
>gi|302795281|ref|XP_002979404.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
gi|300153172|gb|EFJ19812.1| hypothetical protein SELMODRAFT_153292 [Selaginella moellendorffii]
Length = 243
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 96/176 (54%), Gaps = 11/176 (6%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMA 91
RIV+V + + L+ A+LL+L+ +P I +YINS G T G A
Sbjct: 29 NSRIVYVGMPLVPAVTELVIAELLYLQYSDPTLPIYMYINSTGTSRADGETVGMETEGFA 88
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--AS 149
I+DTMQ +K I T +G A LLL+AG KG R+ LP+A ++ QP GQ A
Sbjct: 89 IHDTMQLVKNEIHTVGVGAAIGQACLLLAAGTKGKRYMLPHATAMIQQPRMPSMGQMPAI 148
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
D+ A++++ + L E+ ++ G E+V K + R + MS +A D+GVVDK+L
Sbjct: 149 DLHLRAKEVIHNRDTLVELLAEHTGNPVEKVAKVMRRPYYMSPKKAMDFGVVDKIL 204
>gi|309322076|ref|YP_003933893.1| clp protease proteolytic subunit [Erodium texanum]
gi|309322092|ref|YP_003933908.1| clp protease proteolytic subunit [Erodium texanum]
gi|300069169|gb|ADJ66291.1| clp protease proteolytic subunit [Erodium texanum]
gi|300069185|gb|ADJ66307.1| clp protease proteolytic subunit [Erodium texanum]
Length = 208
Score = 134 bits (337), Expect = 1e-29, Method: Composition-based stats.
Identities = 59/196 (30%), Positives = 105/196 (53%), Gaps = 4/196 (2%)
Query: 20 PMVVEQTNRGE-RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
P E+ E D+Y+ L +ER++F+ I+ + + + ++FL E L
Sbjct: 15 PDADEEDGEVEVTWMDLYNLLFRERVLFLGRAIKPEITNHLVSLMVFLTVERDDWSPMLL 74
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG + G+++YDT++ T C+G A SM S++L G R A P+AR+++H
Sbjct: 75 INSPGGYIFNGLSLYDTVRLSGAR--TLCVGTAVSMASVILVGGSDNKRAAFPHARVMIH 132
Query: 139 QPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP F + ++ A+ ++ ++ + EIYV G+ + + L+ D ++ +EA
Sbjct: 133 QPRINKFEDEGPEVIMEARIMLDLRHHIVEIYVLKTGQPFWVISVDLEVDTYLTPTEAKI 192
Query: 198 WGVVDKVLMSRIDIEE 213
+G+VD +L+ D EE
Sbjct: 193 YGLVDLILIKAKDAEE 208
>gi|148906385|gb|ABR16347.1| unknown [Picea sitchensis]
Length = 393
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+++ I + L+ A+L++L+ +NP K I YINSPG
Sbjct: 173 DLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEPIA 232
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + ++KP + T G A +LLS G KG R +P++ L
Sbjct: 233 FETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLPVVNK 292
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG + D+ A+++ E+ K GKT EE+ K + R EA D+G+ DK
Sbjct: 293 SSGSSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEAIDYGIADK 352
Query: 204 VLMSRIDIEEK 214
+L + + EK
Sbjct: 353 ILPKQGLVMEK 363
>gi|218197363|gb|EEC79790.1| hypothetical protein OsI_21214 [Oryza sativa Indica Group]
Length = 386
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 QTNRGERSY-----DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
+ RG R D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYI
Sbjct: 148 RAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYI 207
Query: 80 NSPGG---------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
NS G T AI D + K + T + A ++LLS G KG R L
Sbjct: 208 NSTGTMDENNGLVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVL 267
Query: 131 PNARI-LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PN+ L G A D+ A+++ E+ K GK EE+ + L
Sbjct: 268 PNSITKLYLPKVHKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRY 327
Query: 190 MSASEACDWGVVDKVLMS 207
A EA D+G+ D +L S
Sbjct: 328 FRAQEAIDYGLADTILHS 345
>gi|193875736|gb|ACF24504.1| chloroplast ATP-dependent Clp protease proteolytic subunit 2
[Gymnochlora stellata]
Length = 240
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 63/185 (34%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Query: 33 YDIY---SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAG 89
YDI + L K RI+F TG+I D ++ I L++ + + + I INSPGG +++G
Sbjct: 30 YDISEVDTILKKNRIIFCTGEINDLVSNTIVNHLVYFSSLSDKDAIKFIINSPGGNISSG 89
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+AIYD + K ++T+ +G +AS+G LL G RF+ PN+RI++HQP GG G
Sbjct: 90 LAIYDAITISKLTLNTYSIGISASIGCFLLCIGSPNRRFSFPNSRIMIHQPFGGIQGTPI 149
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE ++++ + LN + + + E++EK D + + EA +G++DK+L+ +
Sbjct: 150 DIEIQTKELIIQRSNLNYLIACHTNNSIEKIEKDTDFEKYFTPHEALRYGIIDKILIKKN 209
Query: 210 DIEEK 214
+K
Sbjct: 210 KTIKK 214
>gi|298707068|emb|CBJ29870.1| ATP-dependent Clp protease proteolytic subunit [Ectocarpus
siliculosus]
Length = 256
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 64/201 (31%), Positives = 112/201 (55%), Gaps = 5/201 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSR-LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+VP + ++ S+ L + RI+ V I++ A + A LL+ E +P K+I
Sbjct: 6 PMVPYT--RDGSTVATWMPVSQCLQQSRIIMVGKFIDEEYANQLIAMLLYHEKNDPNKKI 63
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
SLY N PG ++ +A+YDT+ + P +ST +G A M S L +AG++G R+ALPN+R
Sbjct: 64 SLYFNCPGALIRPALAVYDTLMHMGPELSTLNLGLATGMVSFLCAAGKRGQRYALPNSRF 123
Query: 136 LLHQ--PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
L+ + + GQASDI Q++++ ++ E + G T ++ + RD +S++
Sbjct: 124 LMQRTGMEDPYQGQASDIGVEVQNVMRGNSKMEEALQRITGHTVAKIHEDFQRDFYLSSA 183
Query: 194 EACDWGVVDKVLMSRIDIEEK 214
EA +G++D+VL+ R +
Sbjct: 184 EAVQYGIIDEVLLPREKTRQD 204
>gi|118162102|gb|ABK64224.1| ClpP [Listeria monocytogenes]
Length = 139
Score = 133 bits (336), Expect = 1e-29, Method: Composition-based stats.
Identities = 81/139 (58%), Positives = 107/139 (76%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA+I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAQIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIMAEKT 139
>gi|115465787|ref|NP_001056493.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|48475230|gb|AAT44299.1| unknown protein [Oryza sativa Japonica Group]
gi|113580044|dbj|BAF18407.1| Os05g0592100 [Oryza sativa Japonica Group]
gi|215701013|dbj|BAG92437.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632764|gb|EEE64896.1| hypothetical protein OsJ_19755 [Oryza sativa Japonica Group]
Length = 386
Score = 133 bits (335), Expect = 1e-29, Method: Composition-based stats.
Identities = 62/198 (31%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 QTNRGERSY-----DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
+ RG R D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYI
Sbjct: 148 RAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYI 207
Query: 80 NSPGG---------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
NS G T AI D + K + T + A ++LLS G KG R L
Sbjct: 208 NSTGTMDENNELVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVL 267
Query: 131 PNARI-LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PN+ L G A D+ A+++ E+ K GK EE+ + L
Sbjct: 268 PNSITKLYLPKVHKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRY 327
Query: 190 MSASEACDWGVVDKVLMS 207
A EA D+G+ D +L S
Sbjct: 328 FRAQEAIDYGLADTILHS 345
>gi|303275766|ref|XP_003057177.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461529|gb|EEH58822.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 372
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 55/183 (30%), Positives = 94/183 (51%), Gaps = 10/183 (5%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAIY 93
RIV++ + + L+ A+LLFL E ++ +YI+S G + T AI
Sbjct: 163 RIVYIGMPLLPAVTELVVAELLFLNYEQNERPGYMYIHSGGSINEKGEVVGIDTEAYAIL 222
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GGFSGQASDIE 152
DTM++IKP + T +G+ ++LL+AG G R ALPNA+I+ H P A +++
Sbjct: 223 DTMRYIKPKMHTVAVGKCFGNAAMLLAAGHPGCRHALPNAQIMTHPPKLNRTFDTAVNVQ 282
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A +I + + GK EEV + LDR + +A ++G++D+++ D+
Sbjct: 283 IRANEIDVCEDTYMGFMSEFSGKPQEEVTRDLDRRRYFTPKQAIEYGLIDRIIQKGSDVF 342
Query: 213 EKS 215
E+
Sbjct: 343 ERK 345
>gi|302524703|ref|ZP_07277045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
gi|302433598|gb|EFL05414.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. AA4]
Length = 204
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 62/170 (36%), Positives = 103/170 (60%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
R L +R++ + G ++D T++ Q+L L E+P K+I+L+I+SPGG V + +AI D M+
Sbjct: 17 RFLSQRVLVLDGVLDDDNGTVLATQMLSLAGEDPVKDIALWIHSPGGSVPSMLAIRDVMR 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+ +ST +G A S G LLSAG G RFALP+ARIL+HQ S G G A ++E A D
Sbjct: 77 LVPCDVSTLALGLACSAGQFLLSAGTPGKRFALPHARILMHQGSAGIGGSAVEVEVQADD 136
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + + + ++ G+ ++ + D +A+EA D+G +D+++
Sbjct: 137 LRYTRDTVLGLTAQDTGQPFDRIFADSLHDRWYTAAEAKDYGFIDQIVDR 186
>gi|110456699|gb|ABG74808.1| ATP-dependent protease catalytic subunit [Jasminum abyssinicum]
Length = 259
Score = 133 bits (335), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
+ E D+Y++L + I+F+ +IE +A I A +L+L ++P + + +INSPGG V
Sbjct: 49 KEEVWTDLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGGAVH 108
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GGFSG 146
G+AIYD M++I I T C GQAASM S+LL++G KG R A P++ +++HQP+ G
Sbjct: 109 DGLAIYDAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAPTRG 168
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + R + +K R+ +IYV K +E+TL+RDH MS EA ++G++DK+
Sbjct: 169 RLQRLVRERNCLNILKERIIDIYVCETRKDRLVIERTLERDHYMSPIEAREYGIIDKI 226
>gi|30171739|gb|AAP20403.1| ClpP [Listeria monocytogenes]
gi|30171741|gb|AAP20404.1| ClpP [Listeria monocytogenes]
gi|30171743|gb|AAP20405.1| ClpP [Listeria monocytogenes]
gi|30171761|gb|AAP20414.1| ClpP [Listeria monocytogenes]
gi|30171763|gb|AAP20415.1| ClpP [Listeria monocytogenes]
gi|30171765|gb|AAP20416.1| ClpP [Listeria monocytogenes]
gi|118162104|gb|ABK64225.1| ClpP [Listeria monocytogenes]
gi|118162108|gb|ABK64227.1| ClpP [Listeria monocytogenes]
gi|118162110|gb|ABK64228.1| ClpP [Listeria monocytogenes]
Length = 139
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/139 (58%), Positives = 106/139 (76%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIMAEKT 139
>gi|30171711|gb|AAP20389.1| ClpP [Listeria monocytogenes]
gi|30171713|gb|AAP20390.1| ClpP [Listeria monocytogenes]
gi|30171715|gb|AAP20391.1| ClpP [Listeria monocytogenes]
gi|30171717|gb|AAP20392.1| ClpP [Listeria monocytogenes]
gi|30171719|gb|AAP20393.1| ClpP [Listeria monocytogenes]
gi|30171721|gb|AAP20394.1| ClpP [Listeria monocytogenes]
gi|30171725|gb|AAP20396.1| ClpP [Listeria monocytogenes]
gi|30171727|gb|AAP20397.1| ClpP [Listeria monocytogenes]
gi|30171729|gb|AAP20398.1| ClpP [Listeria monocytogenes]
gi|30171731|gb|AAP20399.1| ClpP [Listeria monocytogenes]
gi|30171733|gb|AAP20400.1| ClpP [Listeria monocytogenes]
gi|30171737|gb|AAP20402.1| ClpP [Listeria monocytogenes]
gi|30171745|gb|AAP20406.1| ClpP [Listeria monocytogenes]
gi|30171747|gb|AAP20407.1| ClpP [Listeria monocytogenes]
gi|30171749|gb|AAP20408.1| ClpP [Listeria monocytogenes]
gi|30171753|gb|AAP20410.1| ClpP [Listeria monocytogenes]
gi|30171755|gb|AAP20411.1| ClpP [Listeria monocytogenes]
gi|30171759|gb|AAP20413.1| ClpP [Listeria monocytogenes]
gi|71480602|gb|AAZ32226.1| ClpP [Listeria monocytogenes]
gi|118162050|gb|ABK64198.1| ClpP [Listeria monocytogenes]
gi|118162052|gb|ABK64199.1| ClpP [Listeria monocytogenes]
gi|118162054|gb|ABK64200.1| ClpP [Listeria monocytogenes]
gi|118162056|gb|ABK64201.1| ClpP [Listeria monocytogenes]
gi|118162058|gb|ABK64202.1| ClpP [Listeria monocytogenes]
gi|118162060|gb|ABK64203.1| ClpP [Listeria monocytogenes]
gi|118162062|gb|ABK64204.1| ClpP [Listeria monocytogenes]
gi|118162064|gb|ABK64205.1| ClpP [Listeria monocytogenes]
gi|118162066|gb|ABK64206.1| ClpP [Listeria monocytogenes]
gi|118162068|gb|ABK64207.1| ClpP [Listeria monocytogenes]
gi|118162070|gb|ABK64208.1| ClpP [Listeria monocytogenes]
gi|118162072|gb|ABK64209.1| ClpP [Listeria monocytogenes]
gi|118162074|gb|ABK64210.1| ClpP [Listeria monocytogenes]
gi|118162076|gb|ABK64211.1| ClpP [Listeria monocytogenes]
gi|118162078|gb|ABK64212.1| ClpP [Listeria monocytogenes]
gi|118162080|gb|ABK64213.1| ClpP [Listeria monocytogenes]
gi|118162082|gb|ABK64214.1| ClpP [Listeria monocytogenes]
gi|118162084|gb|ABK64215.1| ClpP [Listeria monocytogenes]
gi|118162086|gb|ABK64216.1| ClpP [Listeria monocytogenes]
gi|118162088|gb|ABK64217.1| ClpP [Listeria monocytogenes]
gi|118162090|gb|ABK64218.1| ClpP [Listeria monocytogenes]
gi|118162092|gb|ABK64219.1| ClpP [Listeria monocytogenes]
gi|118162094|gb|ABK64220.1| ClpP [Listeria monocytogenes]
gi|118162096|gb|ABK64221.1| ClpP [Listeria monocytogenes]
gi|118162098|gb|ABK64222.1| ClpP [Listeria monocytogenes]
gi|118162100|gb|ABK64223.1| ClpP [Listeria monocytogenes]
gi|118162106|gb|ABK64226.1| ClpP [Listeria monocytogenes]
gi|118162112|gb|ABK64229.1| ClpP [Listeria monocytogenes]
gi|118162114|gb|ABK64230.1| ClpP [Listeria monocytogenes]
gi|118162116|gb|ABK64231.1| ClpP [Listeria monocytogenes]
gi|150372482|dbj|BAF66030.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372484|dbj|BAF66031.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372486|dbj|BAF66032.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372488|dbj|BAF66033.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372490|dbj|BAF66034.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372492|dbj|BAF66035.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372494|dbj|BAF66036.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372496|dbj|BAF66037.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372498|dbj|BAF66038.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372500|dbj|BAF66039.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372502|dbj|BAF66040.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372504|dbj|BAF66041.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372506|dbj|BAF66042.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372508|dbj|BAF66043.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372510|dbj|BAF66044.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372512|dbj|BAF66045.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372514|dbj|BAF66046.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372516|dbj|BAF66047.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372518|dbj|BAF66048.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372520|dbj|BAF66049.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372522|dbj|BAF66050.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372524|dbj|BAF66051.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372526|dbj|BAF66052.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372528|dbj|BAF66053.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372530|dbj|BAF66054.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372532|dbj|BAF66055.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372534|dbj|BAF66056.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372538|dbj|BAF66058.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372540|dbj|BAF66059.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372542|dbj|BAF66060.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372544|dbj|BAF66061.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372546|dbj|BAF66062.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372548|dbj|BAF66063.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372550|dbj|BAF66064.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372552|dbj|BAF66065.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372554|dbj|BAF66066.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372556|dbj|BAF66067.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372558|dbj|BAF66068.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372560|dbj|BAF66069.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372562|dbj|BAF66070.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372564|dbj|BAF66071.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372566|dbj|BAF66072.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372568|dbj|BAF66073.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372570|dbj|BAF66074.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372572|dbj|BAF66075.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372574|dbj|BAF66076.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372576|dbj|BAF66077.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372578|dbj|BAF66078.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372580|dbj|BAF66079.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372582|dbj|BAF66080.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372584|dbj|BAF66081.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372586|dbj|BAF66082.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372588|dbj|BAF66083.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372590|dbj|BAF66084.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372592|dbj|BAF66085.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372594|dbj|BAF66086.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372596|dbj|BAF66087.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|150372598|dbj|BAF66088.1| Clp protease proteolytic subunit [Listeria monocytogenes]
gi|189484999|gb|AAP20409.2| ClpP [Listeria monocytogenes]
Length = 139
Score = 133 bits (334), Expect = 2e-29, Method: Composition-based stats.
Identities = 81/139 (58%), Positives = 106/139 (76%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIMAEKT 139
>gi|110456662|gb|ABG74781.1| ATP-dependent protease catalytic subunit [Jasminum leratii]
Length = 261
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 70/178 (39%), Positives = 112/178 (62%), Gaps = 1/178 (0%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
+ E D+Y++L + I+F+ +IE +A I A +L+L ++P + + +INSPGG V
Sbjct: 51 KEEVWTDLYTKLYQLGILFLGEEIEFVVANEIIAAMLYLNMQDPLQRLYFFINSPGGAVH 110
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GGFSG 146
G+AIYD M++I I T C GQAASM S+LL++G KG R A P++ +++HQP+ G
Sbjct: 111 DGLAIYDAMKYIDQEIHTICYGQAASMASVLLASGAKGHRGAYPHSMVMMHQPALAPTRG 170
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + R + +K R+ +IYV K +E+TL+RDH MS EA ++G++DK+
Sbjct: 171 RLQRLVRERNCLNILKERIIDIYVCETRKDRLVIERTLERDHYMSPIEAREYGIIDKI 228
>gi|116872513|ref|YP_849294.1| ATP-dependent Clp protease proteolytic subunit [Listeria welshimeri
serovar 6b str. SLCC5334]
gi|116741391|emb|CAK20515.1| ATP-dependent Clp protease subunit ClpP [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 190
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 112/170 (65%), Gaps = 1/170 (0%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
R V + G+I +A + QLL LE+ + + I+++INS GG V AG I+D ++FIKP
Sbjct: 22 RTVLIYGEINQELAEEVSKQLLLLESISDE-PITIFINSQGGHVEAGDTIHDMIKFIKPT 80
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++I++++
Sbjct: 81 VKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMR 140
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
R+N + + G++YE++ K DR+ +S +EA D+G+V++++ +R +++
Sbjct: 141 ERINRLIAEATGQSYEKISKDTDRNFWLSVNEAKDYGIVNEIIQNRDNLK 190
>gi|307718260|ref|YP_003873792.1| hypothetical protein STHERM_c05540 [Spirochaeta thermophila DSM
6192]
gi|306531985|gb|ADN01519.1| hypothetical protein STHERM_c05540 [Spirochaeta thermophila DSM
6192]
gi|315185422|gb|EFU19194.1| ATP-dependent Clp protease proteolytic subunit ClpP [Spirochaeta
thermophila DSM 6578]
Length = 194
Score = 132 bits (333), Expect = 2e-29, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 108/174 (62%), Gaps = 1/174 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ L+ R + ++G++ + + QLL LE + + + ++I+SPGG V AG AI+D ++
Sbjct: 21 KFLRTRSIILSGEVNKELVEKVVKQLLLLE-QMGDEPVKVFIDSPGGDVDAGFAIFDMIR 79
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
F+ P+ T MG AS +L+L A K R LPN+ L+HQP G G A++IE HA++
Sbjct: 80 FVGVPVYTIGMGLVASAAALILLAAPKEYRLGLPNSHYLIHQPWSGMRGVATEIEIHAKE 139
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
I + + ++N+I + G+ E+VEK DRD+ ++A EA +G++ +++ S ++
Sbjct: 140 IERTRHKINQIISEETGRPLEQVEKDTDRDYWLNAGEALSYGLISRIISSGKEL 193
>gi|99024182|dbj|BAE94553.1| ATP-dependent protease proteolytic subunit ClpP [Takakia
lepidozioides]
Length = 176
Score = 132 bits (333), Expect = 3e-29, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 110/176 (62%), Gaps = 4/176 (2%)
Query: 16 LGL-VPMVVEQTNRGERS--YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V + E + D+Y+RL +ER++F ++D +A +++L E+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRIDVYNRLHRERLLFPGQHVDDEIANQPIGIMMYLNGEDES 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ LYINSPGG V AG+++YD MQF+ P + T CMG AASMGS + GE R ALP+
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVAPDVHTICMGLAASMGSFTSTGGEITKRIALPH 120
Query: 133 ARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
AR+++HQP S + GQA + A++++K++ + ++YV+ GK + + ++RD
Sbjct: 121 ARVMIHQPASSYYDGQAGECITEAEEVLKLRDCITKVYVQRTGKPLWIISEDMERD 176
>gi|308807038|ref|XP_003080830.1| ribulose-bisphosphate carboxy (ISS) [Ostreococcus tauri]
gi|116059291|emb|CAL54998.1| ribulose-bisphosphate carboxy (ISS) [Ostreococcus tauri]
Length = 604
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/107 (64%), Positives = 85/107 (79%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
LVPMV+EQTNRGER +DIYSRLLKERIVF+ G I+D ++L AQLLFLE+ +P I
Sbjct: 411 ALVPMVLEQTNRGERVFDIYSRLLKERIVFINGPIDDTASSLAVAQLLFLESASPTAPIW 470
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGE 123
+Y+NSPGG VTAG+ IYDTMQ++ PPI T C+GQA+SM SLLL+
Sbjct: 471 MYVNSPGGSVTAGLGIYDTMQYVSPPIHTLCVGQASSMASLLLACPT 517
>gi|30171735|gb|AAP20401.1| ClpP [Listeria monocytogenes]
Length = 139
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 80/139 (57%), Positives = 105/139 (75%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I+D++A I +QL FL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDDNVANSIVSQLFFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIMAEKT 139
>gi|110589386|gb|ABG77202.1| ATP-dependent Clp protease ATP-binding subunit ClpX [Endoriftia
persephone 'Hot96_1+Hot96_2']
Length = 150
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 69/145 (47%), Positives = 104/145 (71%), Gaps = 1/145 (0%)
Query: 66 LEAENPQKEISLYINSP-GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L++E + + I+ P GG VTAGM+IYDTMQFI+P +ST C+GQAASMG+LLL+ G
Sbjct: 1 LKSEKSGQGMFTSISIPRGGPVTAGMSIYDTMQFIRPDVSTMCIGQAASMGALLLTGGAP 60
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
G R+ LPN+R+++HQP GG GQASDIE HA++I+ ++ RLNEI + G++ +++
Sbjct: 61 GKRYCLPNSRMMIHQPLGGVQGQASDIEIHAKEILLLRERLNEILAHHTGQSLKQIAADT 120
Query: 185 DRDHIMSASEACDWGVVDKVLMSRI 209
+RD+ + +A +G++D+VL R
Sbjct: 121 ERDNFLGGEDAVAYGLIDQVLAQRS 145
>gi|303270891|ref|XP_003054807.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462781|gb|EEH60059.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 210
Score = 132 bits (332), Expect = 3e-29, Method: Composition-based stats.
Identities = 61/182 (33%), Positives = 106/182 (58%), Gaps = 1/182 (0%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN 80
V +T+ GE D ++ L + R++F+ +I++ +AT +CA+LL L+ + P K+I++++N
Sbjct: 14 NVAVRTSGGE-MIDCFTALERNRVIFIGDRIDEDVATSVCAKLLALQYDAPDKDITIFLN 72
Query: 81 SPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
G I D M ++ IS MG A ++LL+ KG R ALP+ARI+L QP
Sbjct: 73 CTAGTQYCVTTILDMMDYVSNDISVVAMGCVAGPPAMLLAGATKGKRLALPSARIILSQP 132
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
GG SG + +++ A+++ + R + K GK++E++ + L RD MS EA + +
Sbjct: 133 LGGLSGTSYEVKIQAKELSRNARSQVAFFAKFTGKSFEDMGEYLVRDTYMSPKEAMEINL 192
Query: 201 VD 202
+D
Sbjct: 193 ID 194
>gi|166201977|gb|ABY84444.1| ATP-dependent protease proteolytic subunit [Lychnis abyssinica]
Length = 372
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 105/174 (60%), Gaps = 1/174 (0%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y L +ER +F+ +I+ +A + A +L+L ++P K++ L+INSPGG + +G+
Sbjct: 194 WMDLYECLYEERYLFLGDEIKIELANKVSALMLYLSIQDPNKDMRLFINSPGGGLISGIV 253
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA-SD 150
++D MQF++ + T C G AAS SL+L GE R A NAR+++HQP+ F
Sbjct: 254 LFDMMQFVRADVCTICYGLAASTASLVLLGGELTKRSAFANARVMIHQPASAFFKDKSRL 313
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+++++K++ ++ +IY++ K + + ++RD MS EA D G+VD +
Sbjct: 314 FAIDSRELLKLREQVTQIYIQRTKKPEWLIWEDMERDTFMSPEEALDHGIVDYI 367
>gi|330816937|ref|YP_004360642.1| ATP-dependent Clp protease proteolytic component [Burkholderia
gladioli BSR3]
gi|327369330|gb|AEA60686.1| ATP-dependent Clp protease proteolytic component [Burkholderia
gladioli BSR3]
Length = 201
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 65/175 (37%), Positives = 101/175 (57%), Gaps = 1/175 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+ R V V G I D +A+ +LL L+AE+ I + ++SPGG + +G AI+D ++FI
Sbjct: 28 FRARAVLVFGTITDALASETVRRLLALDAESAA-PIDMIVSSPGGHLESGDAIHDVVRFI 86
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P++ G S + L + RF LP R L+HQPSGG SGQASDI AQ+IV
Sbjct: 87 DAPVNMIGTGWVGSAATHLYLGAARARRFCLPQTRFLIHQPSGGASGQASDIAIQAQEIV 146
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
K + R+ + + CG+ V + ++RD M A EA +G+V +V+ R ++ ++
Sbjct: 147 KARERIAAVIARECGQPLARVLEDIERDRWMPAQEALRYGLVARVVERRAELADR 201
>gi|226505068|ref|NP_001149025.1| LOC100282645 [Zea mays]
gi|195624074|gb|ACG33867.1| ATP-dependent Clp protease proteolytic subunit-like [Zea mays]
Length = 339
Score = 132 bits (332), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + LI AQL++LE N ++ + +YINS P G+ + G AIY
Sbjct: 137 RIVYIGMPLVPAVTELIVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 196
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASDI 151
D M +K I T C+G AA L+L+AG+KG R+ P+A+ ++ QP G ASD+
Sbjct: 197 DAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQPRIPSYGMMQASDV 256
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+++V + L ++ ++ G E+++K + M + +A ++GV+DK+L
Sbjct: 257 VIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKIL 310
>gi|168026989|ref|XP_001766013.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682656|gb|EDQ69072.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 348
Score = 132 bits (331), Expect = 4e-29, Method: Composition-based stats.
Identities = 58/185 (31%), Positives = 90/185 (48%), Gaps = 10/185 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + LI A+LL+L+ +NP K I YINS G G
Sbjct: 127 DLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPSKPIYFYINSSGTQNEKKESIG 186
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DT++++K + T GQA ++LLS GEKG R P++ L
Sbjct: 187 FETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSIGEKGFRALQPSSSTKLYSPKVNQ 246
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG ++D+ +++ ++ GK+ EE+ + R EA D+G+ DK
Sbjct: 247 SSGSSTDMWIKGKELDANTDYYIDLLASGTGKSKEEIANDIRRPRYFRPQEAIDYGLADK 306
Query: 204 VLMSR 208
++ R
Sbjct: 307 IIEPR 311
>gi|159467461|ref|XP_001691910.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158278637|gb|EDP04400.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 282
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 65/209 (31%), Positives = 122/209 (58%), Gaps = 8/209 (3%)
Query: 4 EGCAKKDSEDVFLGL-VPMVVEQTNRGER---SYDIYSRLLKERIVFVTGQIEDHMATLI 59
G K+ + + VP V+ + G+R D++ +++VF+ I + +A +
Sbjct: 53 SGAPKRK-VTTMMPVSVPKVLCRPP-GQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNM 110
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
A L+L++ + ++ I ++N PGG V +A+YDTMQ+++ +T C G MG LL
Sbjct: 111 IALTLYLDSLDQKR-IYYWLNVPGGDVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLL 169
Query: 120 SAG-EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+AG EKG RFA+P++ +++H PSG GQAS++ ++++V+++ L+ + G+ Y+
Sbjct: 170 TAGGEKGYRFAMPHSILMMHHPSGASRGQASEMHIESRELVRMRDYLSLLTSNATGQPYD 229
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMS 207
V + L R+ M +A ++G++DKVL +
Sbjct: 230 RVIRELSRNKWMDPKQAIEYGMIDKVLTT 258
>gi|30171723|gb|AAP20395.1| ClpP [Listeria monocytogenes]
gi|30171757|gb|AAP20412.1| ClpP [Listeria monocytogenes]
Length = 139
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 80/139 (57%), Positives = 106/139 (76%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I++++A I +QLLFL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDENVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIMAEKT 139
>gi|70942851|ref|XP_741542.1| ATP-dependent Clp protease proteolytic subunit, [Plasmodium
chabaudi chabaudi]
gi|56519988|emb|CAH74558.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium chabaudi chabaudi]
Length = 202
Score = 132 bits (331), Expect = 5e-29, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 105/184 (57%), Gaps = 11/184 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV--------- 85
I S LL +RI+F++ I H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 18 IPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIVNLN 77
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+T ++I D + +I + T+C+G+A + +L S+G+KG RF+L N+ L Q
Sbjct: 78 GITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLKQSYSII 137
Query: 145 -SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QA++IE ++I+ K+++ +I KN K + + LDRD +A EA D+ ++D
Sbjct: 138 PFNQATNIEIQNKEIMNTKKKVIDIIAKNTEKDSNIISEILDRDRYFNAKEASDFNLIDH 197
Query: 204 VLMS 207
+L
Sbjct: 198 ILEK 201
>gi|168061571|ref|XP_001782761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665734|gb|EDQ52408.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 391
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ I + LI A+LL+L+ +NP K I YINS G G
Sbjct: 170 DLPSLLLDARICYLGMAIVPAVTELIIAELLWLDFDNPTKPIYFYINSSGTQNEKKESIG 229
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI DT++++K + T GQA ++LLS GEKG R P++ L
Sbjct: 230 FETEAYAIADTIRYVKSKVYTINCGQAFGQAAMLLSLGEKGYRALQPSSSTKLYSPKVNQ 289
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG ++D+ +++ ++ GK+ E + + R EA D+G+ DK
Sbjct: 290 SSGSSTDMWIKGKELDANTDYYIDLLASGTGKSKEVIANDIRRPRYFRPQEAVDYGLADK 349
Query: 204 VLMSRIDIEEK 214
++ R EK
Sbjct: 350 IIEPRGIAMEK 360
>gi|124809228|ref|XP_001348522.1| ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium falciparum 3D7]
gi|23497417|gb|AAN36961.1|AE014821_48 ATP-dependent Clp protease proteolytic subunit, putative
[Plasmodium falciparum 3D7]
Length = 244
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 104/184 (56%), Gaps = 11/184 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV-------- 86
I S LL +RI+F++ I H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 60 IPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDIDNNKIINLN 119
Query: 87 --TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
T ++I D + +I + T+C+G+A + +L S+G+KG RF+L N+ L+Q
Sbjct: 120 GITDVISIVDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLNQSYSII 179
Query: 145 -SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QA++IE ++I+ K+++ EI KN K + L+RD +A EA D+ ++D
Sbjct: 180 PFNQATNIEIQNKEIMNTKKKVIEIISKNTEKDTNVISNVLERDKYFNADEAVDFKLIDH 239
Query: 204 VLMS 207
+L
Sbjct: 240 ILEK 243
>gi|148910727|gb|ABR18430.1| unknown [Picea sitchensis]
Length = 393
Score = 131 bits (330), Expect = 5e-29, Method: Composition-based stats.
Identities = 61/191 (31%), Positives = 93/191 (48%), Gaps = 10/191 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+++ I + L+ A+L++L+ +NP K I YINSPG
Sbjct: 173 DLPSLLLDARILYLGMPIVPAVTELLIAELMWLDYDNPSKPIYFYINSPGTQNEKHEPIA 232
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + ++KP + T G A +LLS G KG R +P++ L
Sbjct: 233 FETEAYAIADMIAYVKPKVYTLNCGMAFGQAGMLLSLGTKGHRALMPSSTTKLHLPVVNK 292
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
SG + D+ A+++ E+ K GKT EE+ K + R EA D+G+ DK
Sbjct: 293 SSGSSIDMWIKAKELEANTEYYIELLAKGIGKTKEEIAKDIQRSRYFFPQEANDYGIADK 352
Query: 204 VLMSRIDIEEK 214
+L + + EK
Sbjct: 353 ILPKQGLVMEK 363
>gi|11467326|ref|NP_043183.1| ATP-dependent Clp protease proteolytic subunit [Cyanophora
paradoxa]
gi|1352091|sp|P48254|CLPPL_CYAPA RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit-like; AltName: Full=Endopeptidase Clp-like
gi|1016127|gb|AAA81214.1| subunit of ClpP protease [Cyanophora paradoxa]
Length = 199
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 68/174 (39%), Positives = 99/174 (56%), Gaps = 4/174 (2%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLI-CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
I + LL ER++F+ ED I LL+LE+EN QK +S YINS +Y
Sbjct: 22 INNALLNERVIFLCNY-EDATDESIYIGMLLYLESENSQKPVSFYINSSITFPNLCFGLY 80
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG--FSGQASDI 151
DT+ IK I T C+G A M SL+L+AG KG RFALPN+RI++ +P +GQA+D+
Sbjct: 81 DTILQIKADIVTICLGLAGGMSSLILAAGTKGQRFALPNSRIMMQEPLIDGGVNGQATDL 140
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++++ K L +Y + G+ +EK L R SA A ++G +D +L
Sbjct: 141 AIEAKELMDTKEILINLYHERTGQPKPVIEKDLQRPRYFSAQAAKEYGFIDSLL 194
>gi|145343690|ref|XP_001416446.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
gi|144576671|gb|ABO94739.1| chloroplast Clp protease, subunit of ClpP peptidase complex
[Ostreococcus lucimarinus CCE9901]
Length = 308
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 11/176 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAIY 93
RIV++ + + LI ++LL+L+ + +K +YINS G T AI+
Sbjct: 108 RIVYIGMPLVPAVTELIVSELLYLQYTDQKKPCYIYINSTGCTRADGEVVGFETEATAIF 167
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS--GQASDI 151
DTM++I I T G A +LLSAG+KG R+ P+A +LHQP + QA+++
Sbjct: 168 DTMKYIGNEIYTVGTGVAIGQACMLLSAGDKGKRYMTPHATAMLHQPRVPSTGERQATEL 227
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
++ + K+ L +I + G + +++K + R M+A +A ++G+VDKV+
Sbjct: 228 NIKWRETLAQKKSLLDILSQTTGHSVAKLDKDMQRPLYMTAKDAIEYGIVDKVIER 283
>gi|218677866|ref|ZP_03525763.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli CIAT
894]
Length = 97
Score = 131 bits (330), Expect = 6e-29, Method: Composition-based stats.
Identities = 63/97 (64%), Positives = 83/97 (85%)
Query: 12 EDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ LVPMVVEQ++RGERS+DIYSRLL+ERI+F+ G++ D ++ L+CAQLLFLEAENP
Sbjct: 1 MREAMQLVPMVVEQSSRGERSFDIYSRLLRERIIFLNGEVNDTVSALVCAQLLFLEAENP 60
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
+K I LYINSPGGVVT+G+A+YDTM++I+ P+ T CM
Sbjct: 61 RKPIHLYINSPGGVVTSGLAMYDTMRYIRAPVHTLCM 97
>gi|195650193|gb|ACG44564.1| endopeptidase Clp [Zea mays]
Length = 388
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYINS G
Sbjct: 164 DLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVA 223
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + K + T + A ++LLS G KG R LPN+ L
Sbjct: 224 SETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVHK 283
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A D+ A+++ E+ K GK EE+ + L A EA D+G+ D
Sbjct: 284 SGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLADT 343
Query: 204 VLMS 207
+L S
Sbjct: 344 ILHS 347
>gi|226529349|ref|NP_001141859.1| hypothetical protein LOC100274001 [Zea mays]
gi|194689706|gb|ACF78937.1| unknown [Zea mays]
Length = 388
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYINS G
Sbjct: 164 DLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVA 223
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + K + T + A ++LLS G KG R LPN+ L
Sbjct: 224 SETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVHK 283
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A D+ A+++ E+ K GK EE+ + L A EA D+G+ D
Sbjct: 284 SGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLADT 343
Query: 204 VLMS 207
+L S
Sbjct: 344 ILHS 347
>gi|56783783|dbj|BAD81195.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|125569868|gb|EAZ11383.1| hypothetical protein OsJ_01248 [Oryza sativa Japonica Group]
Length = 306
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 16/196 (8%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ +K I LYINS G G
Sbjct: 98 DLASFLYKNRIVYLGMCLVPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGY 157
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL-----PNARILLH-- 138
T AIYD M+++K PI T C+G A +LLL+AG K N ILL
Sbjct: 158 ETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVSVVFASKKYEDNDLILLTFN 217
Query: 139 -QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP G F GQA+D++ ++I +K + ++ ++ GK+ EE+ + + R S SEA D
Sbjct: 218 VQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVD 277
Query: 198 WGVVDKVLMSRIDIEE 213
+G++DKVL + E+
Sbjct: 278 YGIIDKVLYNEKSQED 293
>gi|326494016|dbj|BAJ85470.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326495362|dbj|BAJ85777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511045|dbj|BAJ91870.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + LI AQL++L+ N + +YINS P G+ T G AIY
Sbjct: 135 RIVYIGMPLVPAVTELIVAQLMYLDWMNSSEPAYIYINSTGTARDDGEPVGMETEGFAIY 194
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASDI 151
D M +K + T C+G AA L+L+AG+KG R+ P+A+ L+ QP G ASD+
Sbjct: 195 DAMMRMKTEVHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKALIQQPRIPSYGMMQASDV 254
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+++V + L ++ ++ G E+++K + M + +A ++GV+DK+L
Sbjct: 255 VIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKIL 308
>gi|242091575|ref|XP_002441620.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
gi|241946905|gb|EES20050.1| hypothetical protein SORBIDRAFT_09g030550 [Sorghum bicolor]
Length = 388
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYINS G
Sbjct: 164 DLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVA 223
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + K + T + A ++LLS G KG R LPN+ L
Sbjct: 224 SETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVHK 283
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A D+ A+++ E+ K GK EE+ + L A EA D+G+ D
Sbjct: 284 SGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADT 343
Query: 204 VLMS 207
+L S
Sbjct: 344 ILHS 347
>gi|219113429|ref|XP_002186298.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583148|gb|ACI65768.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 199
Score = 131 bits (329), Expect = 7e-29, Method: Composition-based stats.
Identities = 63/175 (36%), Positives = 98/175 (56%), Gaps = 9/175 (5%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + L+ A+LL+L E+ + I++YINS G T AI
Sbjct: 12 NRIVYIGMPLVPAVTELVIAELLYLNYESTTEPITMYINSSGTSTANGQAVGFETEAFAI 71
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
D M++++PP+ T +GQA ++LLS G++G RFALPNA ILL+QP GQASDI
Sbjct: 72 ADVMKYVRPPVHTVALGQAFGAAAMLLSQGKRGSRFALPNATILLNQPKSQARGQASDIA 131
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+++ +R E+ CGK E V + R + EA ++G++D V+ +
Sbjct: 132 IKAREVAHNRRTTCELIASACGKPVETVMEDCSRVKYLQPHEAVEYGLIDAVVEN 186
>gi|150372536|dbj|BAF66057.1| Clp protease proteolytic subunit [Listeria monocytogenes]
Length = 139
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 81/139 (58%), Positives = 106/139 (76%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
IYSRLLK+RI+ + I+D++A I +QLLFL+A++P+K+I LYINSPGG ++AGMAIYD
Sbjct: 1 IYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
TM F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE
Sbjct: 61 TMNFVKADVQTIGMGMAASMGSFLLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIA 120
Query: 155 AQDIVKIKRRLNEIYVKNC 173
A+ I+KIK R+N I +
Sbjct: 121 ARHILKIKERMNTIKAEKT 139
>gi|315302638|ref|ZP_07873441.1| Clp protease [Listeria ivanovii FSL F6-596]
gi|313628992|gb|EFR97322.1| Clp protease [Listeria ivanovii FSL F6-596]
Length = 190
Score = 131 bits (329), Expect = 8e-29, Method: Composition-based stats.
Identities = 66/175 (37%), Positives = 112/175 (64%), Gaps = 1/175 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+L+ R V + G+I +A + QLL LE+ + + I+++INS GG V AG I+D ++
Sbjct: 17 KLIDTRTVLIYGEINQELAEDVSKQLLLLESISDE-PITIFINSQGGHVEAGDTIHDMIK 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + G AS G + A EK RF+LPN R ++HQP+GG GQ+++IE A++
Sbjct: 76 FIKPTVKVVGTGWVASAGITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKE 135
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I++++ R+N + G+TYE++ K DR+ +S +EA D+G+V +++ +R ++
Sbjct: 136 IIRMRERINRLXXXXTGQTYEKISKDTDRNFWLSVNEAKDYGIVSEIIENRDGLK 190
>gi|302835744|ref|XP_002949433.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
gi|300265260|gb|EFJ49452.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
Length = 269
Score = 130 bits (328), Expect = 9e-29, Method: Composition-based stats.
Identities = 62/209 (29%), Positives = 120/209 (57%), Gaps = 8/209 (3%)
Query: 4 EGCAKKDSEDVFLGL-VPMVVEQTNRGERSY---DIYSRLLKERIVFVTGQIEDHMATLI 59
G K+ + + VP V+ G++ D++ +++VF+ I + +A +
Sbjct: 41 SGAPKRK-VTTMMPVSVPKVL-VRPPGQKQMEWVDLWEAYTYQKVVFIKEAITEEVANNM 98
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLL- 118
A L+L++ + ++ I ++N PGG V +A+YDTMQ+++ +T C G MG L
Sbjct: 99 IALTLYLDSLDNKR-IYYWLNCPGGEVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLL 157
Query: 119 LSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+ GEKG RFA+P++ +++H PSG GQAS++ ++++V+++ L+ + + G+ Y+
Sbjct: 158 TTGGEKGYRFAMPHSILMMHHPSGASRGQASEMHIESRELVRMRDYLSLLVSNSTGQPYD 217
Query: 179 EVEKTLDRDHIMSASEACDWGVVDKVLMS 207
V + L R+ M +A ++G++DKVL +
Sbjct: 218 RVIRELSRNKWMDPKQAIEYGMIDKVLTT 246
>gi|108708097|gb|ABF95892.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
gi|218192812|gb|EEC75239.1| hypothetical protein OsI_11536 [Oryza sativa Indica Group]
gi|222624913|gb|EEE59045.1| hypothetical protein OsJ_10812 [Oryza sativa Japonica Group]
Length = 341
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 98/174 (56%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + L+ AQL++LE N ++ + +YINS P G+ + G AIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASDI 151
D M +K I T C+G AA L+L+AG+KG R+ P+A+ ++ QP G ASD+
Sbjct: 199 DAMMRMKTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQPRIPSYGMMQASDV 258
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+++V + L + ++ G E+++K + M + +A ++GV+DK+L
Sbjct: 259 VIRAKEVVHNRNTLVRLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKIL 312
>gi|82752460|ref|XP_727310.1| ATP-dependent Clp protease proteolytic subunit [Plasmodium yoelii
yoelii str. 17XNL]
gi|23483092|gb|EAA18875.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Plasmodium yoelii yoelii]
Length = 337
Score = 130 bits (328), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/169 (37%), Positives = 103/169 (60%), Gaps = 1/169 (0%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I + + QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 158 FKKRIIYLTDEINKKTSDELIKQLLYLDNINHN-DIKIYINSPGGSINEGLAILDIFNYI 216
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R + PN RI++HQP G G DIE ++I+
Sbjct: 217 KSDIQTISFGLVASMASVILASGKKGKRKSFPNCRIMIHQPLGNAFGHPHDIEIQTKEIL 276
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L K + + +EK DRD+ M++ EA +G++D+V+ ++
Sbjct: 277 YLKKLLYYYLSKFTNQNEQTIEKNSDRDYYMNSFEAKKYGIIDQVIETK 325
>gi|296284618|ref|ZP_06862616.1| ATP-dependent Clp protease proteolytic subunit [Citromicrobium
bathyomarinum JL354]
Length = 207
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 64/175 (36%), Positives = 100/175 (57%), Gaps = 1/175 (0%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
++ L R V + G ++ MA I QLL+L+ + + I + +NSPGG V +G I+D +
Sbjct: 31 NKFLDARTVLIFGGVDQKMAERISMQLLYLDHVSHE-PIRVIVNSPGGHVESGDTIHDLI 89
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
FI P++ G AS+ + + + RF LPN R L+HQPSGG G ASDI AQ
Sbjct: 90 SFIASPVAMIGTGWVASIATHIFLSVPAERRFCLPNTRFLIHQPSGGARGMASDIAIQAQ 149
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+IVK++ R+ G+ E+V K +DRD M+ EA D+G++ V+ + ++
Sbjct: 150 EIVKMRERIAHKISDATGQPVEKVIKDIDRDFWMNTEEAKDYGILGTVINNAKEV 204
>gi|166201966|gb|ABY84438.1| ATP-dependent protease proteolytic subunit [Oenothera fruticosa]
Length = 295
Score = 130 bits (327), Expect = 1e-28, Method: Composition-based stats.
Identities = 65/190 (34%), Positives = 112/190 (58%), Gaps = 5/190 (2%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+++ L ++RI+F+ +I+ + I +++L +NP ++ +INSPGG+ G
Sbjct: 20 WLDLFNILYRKRILFLGQEIDVELGNHIVGLMVYLGIDNPFLDMIFFINSPGGLAIPGFG 79
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS-GQASD 150
IYD MQ+IKP + T +G ASM SL+LS G KG R N RI++HQP+ +
Sbjct: 80 IYDIMQYIKPNVYTIGLGVVASMASLILSGGGKGKRIGGKNMRIMIHQPAMSYRKDPLRT 139
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV----LM 206
I R A+ + ++ ++ + Y+K GK + K L+R+ M+++EA +G+VD + L+
Sbjct: 140 ILREAEGMSCLRTQVLKCYIKKTGKDCGVINKLLERNTFMTSTEALGFGIVDSIADGRLL 199
Query: 207 SRIDIEEKSK 216
+RI+ E + K
Sbjct: 200 TRIEKERRMK 209
>gi|224009932|ref|XP_002293924.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
gi|220970596|gb|EED88933.1| catalytic subunit of clp protein superfamily [Thalassiosira
pseudonana CCMP1335]
Length = 225
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 60/177 (33%), Positives = 95/177 (53%), Gaps = 9/177 (5%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAI 92
RIV++ + + L+ A+LL+L E+ K +++YINS G T AI
Sbjct: 36 NRIVYIGMPLVPAVTELVIAELLYLNYEDQSKPVTMYINSSGTTTANGQAVGFETEAFAI 95
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
D M++I+PP++T +GQA +++LS G KG R ALPNA I L+QP GQASDI
Sbjct: 96 ADVMKYIRPPVNTVAIGQAFGAAAMILSQGRKGGRAALPNATIRLNQPRSQARGQASDIA 155
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
A+++ ++ ++ + GK V R + EA ++G++DKV+ S
Sbjct: 156 IKAREVAHNRKTTCDLIAQATGKPLSVVMNDCQRVKYLQPDEAVEYGLIDKVIRSEE 212
>gi|82594064|ref|XP_725269.1| Clp protease [Plasmodium yoelii yoelii str. 17XNL]
gi|23480207|gb|EAA16834.1| Clp protease [Plasmodium yoelii yoelii]
Length = 240
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 63/184 (34%), Positives = 106/184 (57%), Gaps = 11/184 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV--------- 85
I S LL +RI+F++ I H++ I +QLL+LE E+ +K I LYINS G +
Sbjct: 56 IPSLLLSKRIIFLSSPIYPHISEQIISQLLYLEYESKRKPIHLYINSTGDLENNKIVNLN 115
Query: 86 -VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+T ++I D + +I + T+C+G+A + +L S+G+KG RF+L N+ L Q
Sbjct: 116 GITDVISIIDVINYISSDVYTYCLGKAYGIACILASSGKKGYRFSLKNSSFCLKQSYSII 175
Query: 145 -SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QA++IE ++I+ K+++ +I KN K + + LDRD +A+EA D+ ++D
Sbjct: 176 PFNQATNIEIQNKEIMNTKKKVIDIIAKNTEKDNNIISEILDRDRYFNANEASDFNLIDH 235
Query: 204 VLMS 207
+L
Sbjct: 236 ILEK 239
>gi|326505514|dbj|BAJ95428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 386
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 61/198 (30%), Positives = 87/198 (43%), Gaps = 15/198 (7%)
Query: 25 QTNRGERSY-----DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
+ +G R D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYI
Sbjct: 149 RAGKGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYI 208
Query: 80 NSPGG---------VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
NS G T AI D + K + T + A ++LLS G KG R L
Sbjct: 209 NSTGTMDENNELVASETDAYAIADFINRSKAKVYTINLSMAYGQAAMLLSLGMKGKRGVL 268
Query: 131 PNARI-LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
PN+ L G A D+ A+++ E+ K GK EE+ + L
Sbjct: 269 PNSITKLHLPKVHKSGGAAIDMWIKAKELETNTDYYLELVSKGVGKPKEELAEFLRGPRY 328
Query: 190 MSASEACDWGVVDKVLMS 207
A EA D+G+ D +L S
Sbjct: 329 FRAQEAIDYGLADTILHS 346
>gi|194706198|gb|ACF87183.1| unknown [Zea mays]
Length = 301
Score = 130 bits (326), Expect = 2e-28, Method: Composition-based stats.
Identities = 59/184 (32%), Positives = 83/184 (45%), Gaps = 10/184 (5%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG--------- 84
D+ S LL RI+F+ I + LI AQ L+L+ ++ K I LYINS G
Sbjct: 77 DLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVA 136
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI-LLHQPSGG 143
T AI D + K + T + A ++LLS G KG R LPN+ L
Sbjct: 137 SETDAYAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLHLPKVHK 196
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G A D+ A+++ E+ K GK EE+ + L A EA D+G+ D
Sbjct: 197 SGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLRGPRYFRAQEALDYGLADT 256
Query: 204 VLMS 207
+L S
Sbjct: 257 ILHS 260
>gi|125525351|gb|EAY73465.1| hypothetical protein OsI_01344 [Oryza sativa Indica Group]
Length = 284
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 69/196 (35%), Positives = 107/196 (54%), Gaps = 16/196 (8%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ +K I LYINS G G
Sbjct: 76 DLASFLYKYRIVYLGMCLLPSVTELMLAEFLYLQYDDAEKPIYLYINSTGTTKNGEKLGY 135
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL-----PNARILLH-- 138
T AIYD M+++K PI T C+G A +LLL+AG K N ILL
Sbjct: 136 ETEAFAIYDAMRYVKVPIFTLCVGNAWGEAALLLAAGAKVSVVFASKKYEDNDLILLTFN 195
Query: 139 -QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
QP G F GQA+D++ ++I +K + ++ ++ GK+ EE+ + + R S SEA D
Sbjct: 196 VQPIGRFQGQATDVDIARKEIRNVKIEMIKLLSRHIGKSVEEIAQDIKRPKYFSPSEAVD 255
Query: 198 WGVVDKVLMSRIDIEE 213
+G++DKVL + E+
Sbjct: 256 YGIIDKVLYNEKSQED 271
>gi|242035789|ref|XP_002465289.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
gi|241919143|gb|EER92287.1| hypothetical protein SORBIDRAFT_01g035610 [Sorghum bicolor]
Length = 339
Score = 129 bits (325), Expect = 2e-28, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 98/174 (56%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + L+ AQL++LE N ++ + +YINS P G+ + G AIY
Sbjct: 137 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 196
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASDI 151
D M + I T C+G AA L+L+AG+KG R+ P+A+ ++ QP G ASD+
Sbjct: 197 DAMMRMNTEIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKAMIQQPRIPSYGMMQASDV 256
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A+++V + L ++ ++ G E+++K + M + +A ++GV+DK+L
Sbjct: 257 VIRAKEVVHNRNTLVKLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDKIL 310
>gi|68069489|ref|XP_676656.1| ATP-dependent CLP protease [Plasmodium berghei strain ANKA]
gi|56496453|emb|CAI00684.1| ATP-dependent CLP protease, putative [Plasmodium berghei]
Length = 329
Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats.
Identities = 66/169 (39%), Positives = 103/169 (60%), Gaps = 2/169 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
K+RI+++T +I + + QLL+L+ N +I +YINSPGG + G+AI D +I
Sbjct: 151 FKKRIIYLTDEINKKTSDELIKQLLYLDNINHN-DIKIYINSPGGSINEGLAILDIFNYI 209
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K I T G ASM S++L++G+KG R + PN RI++HQP G G DIE ++I+
Sbjct: 210 KSDIQTISFGLVASMASVILASGKKGKRKSFPNCRIMIHQPLGNAYGHPHDIEIQTKEIL 269
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
+K+ L K K E +EK DRD+ +A EA ++G+VD+V+ ++
Sbjct: 270 YLKKLLYYYLSKFTNKNEETIEKHSDRDYY-NAYEAKEYGIVDEVVETK 317
>gi|255088111|ref|XP_002505978.1| predicted protein [Micromonas sp. RCC299]
gi|226521249|gb|ACO67236.1| predicted protein [Micromonas sp. RCC299]
Length = 223
Score = 129 bits (324), Expect = 3e-28, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 10/182 (5%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT---------AGMAIY 93
RIV++ + + L+ A+LLFL E + +YI+SPG + AI
Sbjct: 20 RIVYIGMPLLPAVTELVVAELLFLNYEQVDRPGYVYIHSPGSINEKGECVGVDSEAYAIL 79
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-GGFSGQASDIE 152
DTM++I+P I T +G+ ++LL+AG+KG R ALPNA+I+ H P + +++
Sbjct: 80 DTMRYIRPKIHTVAVGKCFGNAAMLLAAGDKGCRHALPNAQIMTHPPKLNRTFDTSVNVQ 139
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A +I + + GK E V++ LDR + +A D+G++D+++ D+
Sbjct: 140 IKANEIEVCEDTYMGFMSEFSGKPIETVKEELDRRRYFTPQQAIDYGLIDRIIQKGTDVF 199
Query: 213 EK 214
EK
Sbjct: 200 EK 201
>gi|307103436|gb|EFN51696.1| hypothetical protein CHLNCDRAFT_139949 [Chlorella variabilis]
Length = 229
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 60/201 (29%), Positives = 91/201 (45%), Gaps = 35/201 (17%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLL 64
++D L P V++ GE D+Y LL+ RI+F+ +I D +A + A LL
Sbjct: 63 ARRERDPI-----LAP-VIQMGPGGEDVVDLYGYLLRNRIIFLNQRISDQVACQVVASLL 116
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L++ N ++EI +YIN P G A ++I DTM+ IK
Sbjct: 117 ALDSLNEEEEIKMYINCPQGSPYAVVSILDTMRAIKA----------------------- 153
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
PN RILL QP GG G A + A ++ + R + + G E VE
Sbjct: 154 ------PNTRILLQQPMGGLQGSADECNITATELNRNMRVMYRFLSEATGLPVETVEMEC 207
Query: 185 DRDHIMSASEACDWGVVDKVL 205
DRD+ + +A G++D V+
Sbjct: 208 DRDNFLGPEQAIALGLIDSVI 228
>gi|194476564|ref|YP_002048743.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191571|gb|ACB42533.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 193
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 67/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+R +FV G I+D MA + A LL++ A + + I + I+S GG +T+ IYDT+ +I
Sbjct: 1 MQRTLFVAGDIDDTMANDLVAALLYMNAVSTKIPICINIDSRGGSITSAFTIYDTINYIS 60
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF-SGQASDIERHAQDIV 159
P+ T C+ A SM LL+AGEKG RFALPN+RI++ QP G QASD+ ++
Sbjct: 61 APVKTVCLSVAESMAVFLLAAGEKGQRFALPNSRIIMEQPIGNVDYRQASDLLIETIEMG 120
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
KRR+NE + G+ ++E+ R + MSA+E+ +G++D VL
Sbjct: 121 FTKRRINECMAEMTGQPMTKIEQDTSRRYHMSAAESVKYGLIDHVLT 167
>gi|254704398|ref|ZP_05166226.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis bv. 3
str. 686]
Length = 95
Score = 128 bits (323), Expect = 3e-28, Method: Composition-based stats.
Identities = 71/95 (74%), Positives = 85/95 (89%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLE 67
+D + + LVPMVVEQTNRGER+YDI+SRLLKERI+FV G +ED M+ L+CAQLLFLE
Sbjct: 1 MRDPIETVMNLVPMVVEQTNRGERAYDIFSRLLKERIIFVNGPVEDGMSMLVCAQLLFLE 60
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
AENP+KEI++YINSPGGVVT+GMAIYDTMQFI+PP
Sbjct: 61 AENPKKEINMYINSPGGVVTSGMAIYDTMQFIRPP 95
>gi|255030852|ref|ZP_05302803.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes LO28]
Length = 191
Score = 128 bits (323), Expect = 4e-28, Method: Composition-based stats.
Identities = 62/162 (38%), Positives = 106/162 (65%), Gaps = 1/162 (0%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
+A + QLL LE+ + I+++INS GG V AG I+D ++FIKP + G AS
Sbjct: 1 LAEDVSKQLLLLESISND-PITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASA 59
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
G + A EK RF+LPN R ++HQP+GG GQ+++IE A++I++++ R+N + + G
Sbjct: 60 GITIYLAAEKENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATG 119
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++YE++ K DR+ +S +EA D+G+V++++ +R ++ K K
Sbjct: 120 QSYEQISKDTDRNFWLSVNEAKDYGIVNEIIENRDGLKIKPK 161
>gi|198433851|ref|XP_002124576.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
intestinalis]
Length = 139
Score = 128 bits (322), Expect = 5e-28, Method: Composition-based stats.
Identities = 79/134 (58%), Positives = 105/134 (78%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YIN+PGG VT+G+AIYDTMQ IK P+ST+ +GQA+SMGSLLL+AGE GMR ALPN+RI+
Sbjct: 1 MYINTPGGTVTSGLAIYDTMQLIKCPVSTWVVGQASSMGSLLLAAGEPGMRNALPNSRIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQP GG SGQASDI A +I K+K +LN++YV++ G+ YE +EK LDRD+ M EA
Sbjct: 61 VHQPLGGASGQASDIVIQANEIKKVKEKLNKLYVQHTGQEYEVIEKALDRDNFMDPYEAK 120
Query: 197 DWGVVDKVLMSRID 210
+G++D VL +
Sbjct: 121 LFGLIDNVLEPTSE 134
>gi|308800244|ref|XP_003074903.1| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
gi|119358826|emb|CAL52171.2| ClpP2 Clp protease proteolytic subunit, probable (IC) [Ostreococcus
tauri]
Length = 297
Score = 127 bits (320), Expect = 9e-28, Method: Composition-based stats.
Identities = 57/176 (32%), Positives = 93/176 (52%), Gaps = 11/176 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAIY 93
RIV++ + + LI ++LL+L+ + +K +YINS G T AIY
Sbjct: 97 RIVYIGMPLVPAVTELIVSELLYLQYADQKKPCYIYINSTGCTRADGEVVGFETEATAIY 156
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS--GQASDI 151
DTM++I I T G A +LLSAG+KG RF P+A +LHQP + QA+++
Sbjct: 157 DTMKYIGNEIYTVGTGVAVGQACVLLSAGDKGKRFMTPHATAMLHQPRVPSTGERQATEL 216
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + K+ L + K G + E+++K + R M+A++A +GV DK++
Sbjct: 217 NIKWHETLAQKKTLLNVLSKTTGHSVEKLDKDMRRPLYMTAADAIQYGVADKIVTR 272
>gi|54023138|ref|YP_117380.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
gi|54014646|dbj|BAD56016.1| putative Clp protease proteolytic subunit [Nocardia farcinica IFM
10152]
Length = 201
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 67/169 (39%), Positives = 101/169 (59%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL RI+ + G ++D TL+ QLL L AEN + ISL+I+SPGG V A +AI D M+
Sbjct: 18 LLSRRILVLDGPLDDDNGTLLATQLLTLAAENDEAPISLWIHSPGGSVPAMLAIRDVMRL 77
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ +ST +G A S G LLSAG +G RFALP+AR+L+HQ S G G A D+E A D+
Sbjct: 78 VPCEVSTLALGLACSAGQFLLSAGSRGKRFALPHARVLMHQGSAGIGGTAVDVEVQADDL 137
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + + G+ Y+ + + D +A++A ++G +D ++ S
Sbjct: 138 RHTVETVLGLIAADTGQPYDRIYEDSLHDRWFTAAQAKEYGFIDHIVDS 186
>gi|210076021|ref|XP_505327.2| YALI0F12353p [Yarrowia lipolytica]
gi|199424953|emb|CAG78134.2| YALI0F12353p [Yarrowia lipolytica]
Length = 263
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 79/219 (36%), Positives = 114/219 (52%), Gaps = 42/219 (19%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
DI ++LL ERIV V G I+D MAT + AQLL+LE ++ QK I +YINSPGG VTAG AI
Sbjct: 45 DIPAKLLNERIVHVAGPIDDSMATSVVAQLLYLEHKSAQKPIHMYINSPGGAVTAGFAIL 104
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM +I+ P+ T C+GQAASM SLLL+ G G R PN+ I+ H+P GG G + +E
Sbjct: 105 DTMNYIRSPVHTVCLGQAASMASLLLTCGAPGNRIMTPNSTIMTHEPLGGIVGSSKLVEL 164
Query: 154 HAQDIVKIKRRLNEIY----------------VKNCGKTYE----------------EVE 181
H + +I+ R+ ++Y + + E +
Sbjct: 165 HTFHLQRIRTRIIQLYYDSMKLGLEGRLKEEGAEETHEAAEPTPLMSLLSSDRSWIDTIN 224
Query: 182 KTLDR----------DHIMSASEACDWGVVDKVLMSRID 210
+ D +A EA G+VD++L ++ +
Sbjct: 225 QKTLTHSLVDTLIGLDQFFNADEALKLGLVDRILKTKGE 263
>gi|293418507|ref|ZP_06660942.1| conserved hypothetical protein [Escherichia coli B088]
gi|291325035|gb|EFE64450.1| conserved hypothetical protein [Escherichia coli B088]
Length = 99
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 73/101 (72%), Positives = 90/101 (89%), Gaps = 2/101 (1%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI
Sbjct: 1 MSYSG--ERDNFAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIV 58
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIKP
Sbjct: 59 AQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIKP 99
>gi|67968315|dbj|BAE00215.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
uncinata]
Length = 206
Score = 127 bits (319), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/191 (32%), Positives = 100/191 (52%), Gaps = 3/191 (1%)
Query: 19 VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
VP V + + E D ++R +ER+ ++D A EN ++
Sbjct: 5 VPKVSFRISGEEDMVRIDTHNRPYRERLPSSGQHMDDETANQPIRITTHPNGENRSQDTH 64
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
Y N PGG V+AG+++YDTMQ P + T +G AASMG + + GE R ALP+AR++
Sbjct: 65 SYTNPPGGAVSAGISVYDTMQSAVPDVHTIRVGLAASMGPSISTGGEITRRMALPHARVM 124
Query: 137 LHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
+HQP+ F QA + A++I+K++ + +I+ + GK V K ++RD A EA
Sbjct: 125 IHQPASSFYEGQAGERLMEAEEILKLRDCITKIHARKTGKPLWVVSKDMERDVFTPAREA 184
Query: 196 CDWGVVDKVLM 206
G+ D V+
Sbjct: 185 RVHGITDPVVT 195
>gi|302340171|ref|YP_003805377.1| endopeptidase Clp [Spirochaeta smaragdinae DSM 11293]
gi|301637356|gb|ADK82783.1| Endopeptidase Clp [Spirochaeta smaragdinae DSM 11293]
Length = 203
Score = 127 bits (318), Expect = 1e-27, Method: Composition-based stats.
Identities = 63/174 (36%), Positives = 112/174 (64%), Gaps = 1/174 (0%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
++++ R + ++G+I +A + QL+ LEA++ I ++I+SPGG AG AI+D M+
Sbjct: 29 KMMETRTIILSGEINKELAERVVRQLILLEAQSDD-PIKVFIDSPGGDADAGFAIFDMMR 87
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
FIKP + T MG AS +++L A R LPN+ L+HQP G G A++IE HA++
Sbjct: 88 FIKPDVYTIGMGLVASAAAIILLAAPVEHRIGLPNSHYLIHQPLSGIRGVATEIEIHARE 147
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ K++ R+N++ + G+ ++VEK DRD+ ++ +EA D+G++ +V +R ++
Sbjct: 148 LQKLRIRINQLISEETGRDLDKVEKETDRDYWLNGTEAVDYGLISRVAKTRDEL 201
>gi|167949879|ref|ZP_02536953.1| peptidase S14, ClpP [Endoriftia persephone 'Hot96_1+Hot96_2']
Length = 125
Score = 126 bits (317), Expect = 2e-27, Method: Composition-based stats.
Identities = 59/120 (49%), Positives = 89/120 (74%)
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
M+IYDTMQFI+P +ST C+GQAASMG+LLL+ G G R+ LPN+R+++HQP GG GQAS
Sbjct: 1 MSIYDTMQFIRPDVSTMCIGQAASMGALLLTGGAPGKRYCLPNSRMMIHQPLGGVQGQAS 60
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DIE HA++I+ ++ RLNEI + G++ +++ +RD+ + +A +G++D+VL R
Sbjct: 61 DIEIHAKEILLLRERLNEILAHHTGQSLKQIAADTERDNFLGGEDAVAYGLIDQVLAQRS 120
>gi|290489472|gb|ADD31120.1| clp protease proteolytic subunit protein [Plumbago auriculata]
Length = 194
Score = 126 bits (316), Expect = 2e-27, Method: Composition-based stats.
Identities = 61/194 (31%), Positives = 108/194 (55%), Gaps = 4/194 (2%)
Query: 16 LGL-VPMVVEQTNRGERSY--DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V E + D+Y+RL + R +F+ ++ + + +++L E+
Sbjct: 1 MPIGVPKVPFLLPENEDATWVDVYNRLYRSRFLFLGEELNTEIGNFLMGLIIYLGIEDET 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
KE+ L++N PGG V G+ + D M+ + P ++T C+G AASMGS +L AGE R A P+
Sbjct: 61 KELFLFLNCPGGWVLPGLGVVDAMEIVTPDVNTICIGIAASMGSFILVAGEITKRAAFPH 120
Query: 133 ARILLHQPSGGFSGQASDIERH-AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
AR+++HQP F S I ++I+ ++ + Y++ G+ + + L+RD +S
Sbjct: 121 ARVMIHQPKSAFYEDQSGICMMEIEEIIILRENITNFYIQRTGQPLWVIMQDLERDAFLS 180
Query: 192 ASEACDWGVVDKVL 205
A+EA +VD +L
Sbjct: 181 ATEAQAHRIVDIIL 194
>gi|270642132|ref|ZP_06222130.1| ATP-dependent Clp protease, proteolytic subunit [Haemophilus
influenzae HK1212]
gi|270317333|gb|EFA28875.1| ATP-dependent Clp protease, proteolytic subunit [Haemophilus
influenzae HK1212]
Length = 269
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 63/114 (55%), Positives = 84/114 (73%)
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++FIKP I T C+GQA SMG+ LL+ G G R ALPNAR+++HQP GGF GQASDI+ H
Sbjct: 156 KVEFIKPDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVMIHQPLGGFRGQASDIQIH 215
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
AQ+I+KIK LN+ + G++ E +EK DRD+ MSA EA +G+VD+VL+ R
Sbjct: 216 AQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQAYGLVDEVLVKR 269
>gi|224125178|ref|XP_002319519.1| predicted protein [Populus trichocarpa]
gi|118486796|gb|ABK95233.1| unknown [Populus trichocarpa]
gi|222857895|gb|EEE95442.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 125 bits (315), Expect = 3e-27, Method: Composition-based stats.
Identities = 60/174 (34%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIY 93
RIV++ + + L+ A+L++L+ +P+ I +YINS G G+ T G AIY
Sbjct: 139 RIVYIGMPLVAAVTELVVAELMYLQWMDPKAPIYIYINSTGTTRDDGESVGMETEGFAIY 198
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDI 151
D+M +K I T +G A LLL+AG KG R+ +P+A+ ++ QP SG ASD+
Sbjct: 199 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGHRYMMPHAKAMIQQPRVPSSGLMPASDV 258
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++ V + L E+ K+ G + E V + R M + A ++GV+DK+L
Sbjct: 259 LIRAKEAVINRDVLTELLAKHTGNSVETVANVMKRPFYMDSRRAKEFGVIDKIL 312
>gi|255635968|gb|ACU18330.1| unknown [Glycine max]
Length = 324
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIY 93
RIV++ + + L+ A+L+ L+ +P++ I +YINS G G+ T G AIY
Sbjct: 122 RIVYIGMPLVPAVTELVVAELMCLQYMDPKETIFIYINSTGTTRDDGETVGMETEGFAIY 181
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDI 151
D M +K I T +G A LLLSAG G RF +P+A+ ++ QP SG ASD+
Sbjct: 182 DAMMQLKNEIHTVAVGSAIGQACLLLSAGTPGKRFMMPHAKAMIQQPRIPSSGLMPASDV 241
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++++ + L ++ K+ G + E V + R + M A+ A ++GV+D++L
Sbjct: 242 LIRAKEVIINRDNLVKLLAKHTGNSEETVANVMKRPYYMDATRAKEFGVIDRIL 295
>gi|194476565|ref|YP_002048744.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
gi|171191572|gb|ACB42534.1| ATP-dependent Clp protease proteolytic subunit [Paulinella
chromatophora]
Length = 219
Score = 125 bits (314), Expect = 4e-27, Method: Composition-based stats.
Identities = 64/197 (32%), Positives = 107/197 (54%), Gaps = 22/197 (11%)
Query: 30 ERSYDIYSRLLKERIVFVTGQI--EDH----------MATLICAQLLFLEAENPQKEISL 77
E D+ S LL ERI+++ + +D + L+ AQLL LE E+ I++
Sbjct: 21 ESMSDLASILLSERIIYLGMALASDDETRQSFSLGMNVTQLMIAQLLCLEFESNSA-ITI 79
Query: 78 YINSPGGVV---------TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
YINS G T AIYDT++FI+ P+ TFC+G A ++LL+ G G R
Sbjct: 80 YINSTGSTDINSNAIGHETEAFAIYDTIRFIESPVHTFCVGVAMGTATMLLACGASGCRA 139
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+LPNA I+L+QP G ++DI + ++ + ++EI + GK+ +++ +R H
Sbjct: 140 SLPNASIILNQPYNYVGGSSTDINIQVEQLLLSRSIMHEILSIHIGKSLQQIRSDCNRIH 199
Query: 189 IMSASEACDWGVVDKVL 205
++A +A +G++D V+
Sbjct: 200 HLTAYQALHYGIIDDVI 216
>gi|46110353|ref|XP_382234.1| hypothetical protein FG02058.1 [Gibberella zeae PH-1]
Length = 157
Score = 125 bits (313), Expect = 5e-27, Method: Composition-based stats.
Identities = 69/147 (46%), Positives = 98/147 (66%), Gaps = 7/147 (4%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VT+GMAIYDTM +IK P+ST C+G AASM ++LL+ GE G RF+LP++ I+
Sbjct: 1 MYINSPGGSVTSGMAIYDTMTYIKSPVSTVCIGGAASMAAILLAGGEAGKRFSLPHSSIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK-------TYEEVEKTLDRDHI 189
+HQP GG GQASDI +A I K + + N+I + K + EE+ ++RD
Sbjct: 61 IHQPLGGTRGQASDIMIYANQIQKTREQSNKIMQYHLNKAKGHDKYSLEEINDLMERDKY 120
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKSK 216
++ EA D GV+D++L R + E + K
Sbjct: 121 LTPEEALDLGVIDEILTKRPETESEKK 147
>gi|225450774|ref|XP_002279451.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296089701|emb|CBI39520.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 125 bits (313), Expect = 6e-27, Method: Composition-based stats.
Identities = 57/174 (32%), Positives = 99/174 (56%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIY 93
RIV++ + + L+ A+L++L+ +P++ + +YIN G G+ T G AIY
Sbjct: 120 RIVYIGMPLVPAVTELVIAELMYLQWMDPKEPVYVYINCTGTTRDDGERVGMETEGFAIY 179
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDI 151
D M +K I T +G A LLL+AG KG RF +P+A+ ++ QP SG ASD+
Sbjct: 180 DAMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPRVPSSGLMPASDV 239
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++++ + L ++ K+ G + E V + R + M +++A ++GV+DK+L
Sbjct: 240 LIRAKEVITNRDTLVKLLAKHTGNSEETVSTVMRRPYYMDSTKAKEFGVIDKIL 293
>gi|295814150|gb|ADG35702.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814152|gb|ADG35703.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814154|gb|ADG35704.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814156|gb|ADG35705.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814158|gb|ADG35706.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
spiralis]
gi|295814160|gb|ADG35707.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
spiralis]
gi|295814162|gb|ADG35708.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
spiralis]
gi|295814164|gb|ADG35709.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
spiralis]
gi|295814166|gb|ADG35710.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
spiralis]
gi|295814168|gb|ADG35711.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814170|gb|ADG35712.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814172|gb|ADG35713.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814174|gb|ADG35714.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814176|gb|ADG35715.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus spiralis
var. platycarpus]
gi|295814178|gb|ADG35716.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
vesiculosus]
gi|295814180|gb|ADG35717.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
vesiculosus]
gi|295814182|gb|ADG35718.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
vesiculosus]
gi|295814184|gb|ADG35719.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
vesiculosus]
Length = 133
Score = 124 bits (312), Expect = 7e-27, Method: Composition-based stats.
Identities = 56/119 (47%), Positives = 82/119 (68%)
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
AIYDTMQFI ++T C G AASMG+ LL AG +G R +LPN+RI++HQP GG GQA+D
Sbjct: 3 AIYDTMQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAQGQAAD 62
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
IE A++I+ KR LN + + +++E+ DRD M+ EA D+G++D+V+ ++
Sbjct: 63 IEIQAKEILYTKRLLNRYMSEYTDQPVDKIEEDTDRDFFMTPQEALDYGLIDEVIKTKT 121
>gi|295814148|gb|ADG35701.1| ATP-dependent clp protease proteolytic subunit clpP [Fucus
ceranoides]
Length = 133
Score = 124 bits (312), Expect = 8e-27, Method: Composition-based stats.
Identities = 56/119 (47%), Positives = 82/119 (68%)
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
AIYDTMQFI ++T C G AASMG+ LL AG +G R +LPN+RI++HQP GG GQA+D
Sbjct: 3 AIYDTMQFIPCDVATVCFGMAASMGAFLLGAGTQGKRKSLPNSRIMIHQPLGGAQGQAAD 62
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
IE A++I+ KR LN + + +++E+ DRD M+ EA D+G++D+V+ ++
Sbjct: 63 IEIQAKEILYTKRLLNRYMSEYTDQPVDKIEEDTDRDFFMTPQEALDYGLIDEVIKTKT 121
>gi|224543457|ref|ZP_03683996.1| hypothetical protein CATMIT_02666 [Catenibacterium mitsuokai DSM
15897]
gi|224523584|gb|EEF92689.1| hypothetical protein CATMIT_02666 [Catenibacterium mitsuokai DSM
15897]
Length = 178
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 74/174 (42%), Positives = 106/174 (60%), Gaps = 1/174 (0%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
D S R++++T +I D +A IC Q+ L A + + +I+L+I SPGG VTAG+AI
Sbjct: 4 DCISEEFSRRVIYITDEITDSLAADICCQMNHLAAVSNE-DITLWIMSPGGSVTAGLAIL 62
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
DTM ++ I T MGQAASM +++ S+G KG R+ NA +++HQ GFSGQ +DI R
Sbjct: 63 DTMNSVECDIKTIVMGQAASMAAVIASSGTKGKRYIGTNAWMMIHQALAGFSGQTTDILR 122
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
AQ I +I L I +NC E + K DRD+ M+A A +G+VD + S
Sbjct: 123 SAQHIEEINNNLYSILARNCSAHIETIAKDCDRDYHMNARTAIVYGLVDHIYQS 176
>gi|297840997|ref|XP_002888380.1| clp protease proteolytic subunit [Arabidopsis lyrata subsp. lyrata]
gi|297334221|gb|EFH64639.1| clp protease proteolytic subunit [Arabidopsis lyrata subsp. lyrata]
Length = 172
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 55/165 (33%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
++R+ F+ +++ ++ + + +++L E K++ L+INSPGG V +GMAIYDTMQF+
Sbjct: 10 FRKRLFFLGQEVDTEISNQLISLMIYLSIEKDTKDLYLFINSPGGWVISGMAIYDTMQFV 69
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+P + T CMG AAS+ S +L G R+ + + S + Q + A++++
Sbjct: 70 RPDVQTICMGLAASIASFILVGGAITKRWVMIH-----QPASSFYEAQTGEFILEAEELL 124
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
K++ + +YV+ GK V + ++RD MSA+EA G+VD V
Sbjct: 125 KLRETMTRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 169
>gi|254704397|ref|ZP_05166225.1| ATP-dependent Clp protease proteolytic subunit [Brucella suis bv. 3
str. 686]
Length = 114
Score = 124 bits (311), Expect = 8e-27, Method: Composition-based stats.
Identities = 77/114 (67%), Positives = 98/114 (85%)
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ST CMGQAASMGSLLL+AG G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+K
Sbjct: 1 VSTLCMGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMK 60
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
RRLNEIYVK+ G+ Y+ +E+TLDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 61 RRLNEIYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSADESK 114
>gi|77414900|ref|ZP_00791005.1| Clp protease [Streptococcus agalactiae 515]
gi|77159045|gb|EAO70251.1| Clp protease [Streptococcus agalactiae 515]
Length = 106
Score = 124 bits (311), Expect = 1e-26, Method: Composition-based stats.
Identities = 64/104 (61%), Positives = 87/104 (83%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TGQ+ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
Y+N+PGG V+AG+AI DTM FIK + T MG AASMG+++ S+
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTIVMGMAASMGTIIASS 104
>gi|159470091|ref|XP_001693193.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158277451|gb|EDP03219.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 276
Score = 123 bits (310), Expect = 1e-26, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 90/188 (47%), Gaps = 12/188 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ +RL ERI+++ I+ +A L+ AQL L E P I YINS G G
Sbjct: 44 DLATRLFSERIMYLGMPIDSSVAELLTAQLFVLVQEAPD-PIFFYINSTGIAKSTTKFGN 102
Query: 86 VTAGMAIYDTMQ--FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
+A+Y M+ PI T C+G A +LLLSAG G R AL ++ I+L QP
Sbjct: 103 EHEAIAVYSMMKGVQKYCPIYTLCVGNAFGEAALLLSAGSPGKRAALRSSTIMLRQPLQR 162
Query: 144 FSGQ-ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
G ASDI+ + + + + + KT E++ R + EA +G++D
Sbjct: 163 LGGMQASDIDIYRKITREKTATMAKYLAACTKKTEEQIMTDFTRPRYFNPYEAVSYGLID 222
Query: 203 KVLMSRID 210
VL + +
Sbjct: 223 TVLEPKEE 230
>gi|218281682|ref|ZP_03488076.1| hypothetical protein EUBIFOR_00643 [Eubacterium biforme DSM 3989]
gi|218217248|gb|EEC90786.1| hypothetical protein EUBIFOR_00643 [Eubacterium biforme DSM 3989]
Length = 181
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 102/164 (62%), Gaps = 1/164 (0%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
RI+ + G++ M+ + +L L A+N I++ I+SPGG + GM I D M+ I+ P
Sbjct: 19 RIINLWGEVTPEMSLYVVTRLQELNAKNHD-PITIQIHSPGGSLRDGMIIIDMMEAIQSP 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G A SM SL+L+AGEKG R AL ++ I++HQ S G+ SDI+ A+ +V+ +
Sbjct: 78 VYTMALGNAMSMASLILAAGEKGHRKALKHSTIMVHQGSTICEGKFSDIKSGAKRMVETE 137
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ E+YVK GKT ++ L D +S+ +A ++G++D+V+
Sbjct: 138 EMIEELYVKYTGKTKRKIHADLQMDLFLSSDKAVEYGLIDEVVE 181
>gi|283050528|gb|ADB07677.1| ATP-dependent Clp protease proteolytic subunit [Ehrharta erecta]
Length = 180
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
+I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ + P I T C+
Sbjct: 1 QEIRGEITNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICL 60
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNE 167
G AASM S +L GE R A P+ARI+LHQP+ + + + +++ K++ +
Sbjct: 61 GIAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARVPEFLLEVEELHKVREMITR 120
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 121 VYALRTGKPFWVVSEDMERDVFMSAEEAKAYGLVDTV 157
>gi|163785571|ref|ZP_02180137.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159879161|gb|EDP73099.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 97
Score = 123 bits (309), Expect = 1e-26, Method: Composition-based stats.
Identities = 66/96 (68%), Positives = 81/96 (84%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+K D + + LVP+VVEQT RGER+YDIYSRLLK+RIV + I+DH+A LI AQLLF
Sbjct: 2 SSKNDIDRIVSQLVPIVVEQTPRGERAYDIYSRLLKDRIVLLGFPIDDHIANLIVAQLLF 61
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
LE+E+P+K+I LYINSPGGVVTAG+AIYDTMQ+IKP
Sbjct: 62 LESEDPEKDIYLYINSPGGVVTAGLAIYDTMQYIKP 97
>gi|302837484|ref|XP_002950301.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
gi|300264306|gb|EFJ48502.1| hypothetical protein VOLCADRAFT_120863 [Volvox carteri f.
nagariensis]
Length = 298
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/188 (32%), Positives = 95/188 (50%), Gaps = 12/188 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ +RL ERI+++ I+ +A L+ AQL L E P I YINS G G
Sbjct: 66 DLATRLFTERIMYLGMPIDSSVAELLTAQLFVLVQEAPD-PIFFYINSTGIAKSTTKFGN 124
Query: 86 VTAGMAIYDTMQFIK--PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
+A+Y M+ ++ PI T C+G A +LLLSAG G R AL ++ I+L QP
Sbjct: 125 EHEAVAVYHMMKGVQKFCPIYTLCVGNAFGEAALLLSAGTPGKRAALRSSTIMLRQPLQR 184
Query: 144 FSGQ-ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG ASDI+ + + + + + + KT E++ + R + EA +G++D
Sbjct: 185 LSGMQASDIDIYRKITREKTQTMAKYLAVCTKKTEEQIMEDFIRPRYFNPYEAVTYGLID 244
Query: 203 KVLMSRID 210
VL + +
Sbjct: 245 TVLEPKEE 252
>gi|255070315|ref|XP_002507239.1| predicted protein [Micromonas sp. RCC299]
gi|226522514|gb|ACO68497.1| predicted protein [Micromonas sp. RCC299]
Length = 203
Score = 123 bits (309), Expect = 2e-26, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG---------VVTAGMAIY 93
RI+++ + + LI ++LL+++ +P + +YINS G T +IY
Sbjct: 30 RIIYIGMPLVPAVTELIVSELLYMQYTDPARPCYIYINSTGCQRADGEVVGFETEATSIY 89
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQASDI 151
DTM++I I T G A +LLSAG+KG RF NA +LHQP QA ++
Sbjct: 90 DTMKYIGNEIFTVGTGVAIGQACMLLSAGDKGKRFMTKNATAMLHQPRVPSTGQRQAIEL 149
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+++++ K+ + +I + G + E+++K + R M+A +A +G++DK++
Sbjct: 150 HIKWKEVLEQKKTMVDILSQTTGHSKEQIDKDIQRPMYMTAEDAIAYGIIDKIV 203
>gi|77409468|ref|ZP_00786161.1| Clp protease [Streptococcus agalactiae COH1]
gi|77171935|gb|EAO75111.1| Clp protease [Streptococcus agalactiae COH1]
Length = 118
Score = 123 bits (308), Expect = 2e-26, Method: Composition-based stats.
Identities = 62/118 (52%), Positives = 81/118 (68%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TGQ+ED+MA I AQLLFL+A++ K+I L
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGQVEDNMANSIIAQLLFLDAQDNTKDIYL 60
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
Y+N+PGG V+AG+AI DTM FIK + T G LLL K I
Sbjct: 61 YVNTPGGSVSAGLAIVDTMNFIKSDVQTMLWGWLLRWEPLLLQVVLKENVLCYRMQNI 118
>gi|169142735|ref|YP_001687162.1| clp protease proteolytic subunit [Oenothera argillicola]
gi|159792973|gb|ABW98729.1| clp protease proteolytic subunit [Oenothera argillicola]
Length = 251
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+ L + R +F+ I +A I ++FL ++ + + +INSPGG+ AG+
Sbjct: 28 WVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLL 87
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTMQ++ PP+ T +G ASM S LL GE R PNAR+++HQP ++ + +
Sbjct: 88 IYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNARVMIHQPESDYTHKDRSL 147
Query: 152 ERHAQ--DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
E H ++ I+ + +Y++ E + L+R+ M+A+EA +G+VD +
Sbjct: 148 EVHLDSGEVEHIRNMVIRVYLERTRLPREVLNDHLERNLFMTATEAKYYGIVDDI 202
>gi|164597829|ref|NP_084718.2| ATP-dependent Clp protease proteolytic subunit [Oenothera elata
subsp. hookeri]
gi|169142970|ref|YP_001687392.1| clp protease proteolytic subunit [Oenothera biennis]
gi|172045753|sp|Q9MTJ8|CLPP_OENEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|159793143|gb|ABW98897.1| clp protease proteolytic subunit [Oenothera biennis]
gi|162423696|emb|CAB67184.2| clp protease proteolytic subunit [Oenothera elata subsp. hookeri]
gi|166201963|gb|ABY84436.1| ATP-dependent protease proteolytic subunit [Oenothera elata subsp.
hookeri]
Length = 249
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 102/175 (58%), Gaps = 2/175 (1%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+ L + R +F+ I +A I ++FL ++ + + +INSPGG+ AG+
Sbjct: 26 WVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLL 85
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QAS 149
IYDTMQ++ PP+ T +G ASM S LL GE R PN R+++HQP ++ Q+
Sbjct: 86 IYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNGRVMIHQPESDYTHKDQSL 145
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+++ + ++ I++ + +Y++ E + L+R++ M+A+EA +G+VD +
Sbjct: 146 EVQLDSGEVEDIRKMVIRVYLERTRLPREVLNDHLERNYFMTATEAKYYGIVDDI 200
>gi|63055014|gb|AAY29045.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 160
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 61/120 (50%), Positives = 90/120 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
>gi|166235549|gb|ABY85464.1| ATP-dependent protease proteolytic subunit [Lychnis chalcedonica]
Length = 222
Score = 122 bits (307), Expect = 2e-26, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 95/175 (54%), Gaps = 1/175 (0%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM 90
D Y L K R++F+ + I LLFL E+ K+ L+I+S GG+ T M
Sbjct: 24 DWLDFYHELHKRRLLFLCQDFNYEIVNQIAGLLLFLHLEDEDKQQHLFIHSRGGLATHAM 83
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH-QPSGGFSGQAS 149
AIYDTMQ + + T MG ASM +LLL+ G R A + RI+LH + F G AS
Sbjct: 84 AIYDTMQLVTLGVHTIGMGVVASMATLLLAGGAYTKRNAYAHTRIMLHLPATRPFKGTAS 143
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++ +++++++ + L EI + G+ + + K + + SA EA +G++D++
Sbjct: 144 EVLGESKEVLRLTQTLVEILEERTGRPQDLIYKDMQKTTHFSAEEAQAYGIIDEI 198
>gi|169143056|ref|YP_001687476.1| clp protease proteolytic subunit [Oenothera parviflora]
gi|159895582|gb|ABX10146.1| clp protease proteolytic subunit [Oenothera parviflora]
Length = 234
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 2/175 (1%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+ L + R +F+ I +A I ++FL ++ + + +INSPGG+ AG+
Sbjct: 26 WVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGLAVAGLL 85
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IYDTMQ++ PP+ T +G ASM S LL GE R PNAR+++HQP ++ + +
Sbjct: 86 IYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNARVMIHQPESDYTHKDRSL 145
Query: 152 ERHAQ--DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
E H ++ I+ + +Y++ E + L+R+ M+A+EA +G+VD +
Sbjct: 146 EVHLDSGEVEHIRNMVIRVYLERTRLPREVLNDHLERNLFMTATEAKYYGIVDDI 200
>gi|302897551|ref|XP_003047654.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728585|gb|EEU41941.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 157
Score = 122 bits (307), Expect = 3e-26, Method: Composition-based stats.
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 7/147 (4%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VT+GMAIYDTM +IK P+ST C+G AASM ++LL+ GE G RF+LP++ I+
Sbjct: 1 MYINSPGGSVTSGMAIYDTMSYIKSPVSTVCVGGAASMAAILLAGGEAGKRFSLPHSSIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK-------TYEEVEKTLDRDHI 189
+HQP GG GQASDI +A I KI+ + N I + K T EE+ ++RD
Sbjct: 61 IHQPLGGTRGQASDILIYANQIQKIREQSNHIMQYHLNKAKGHDKYTIEEINDLMERDKY 120
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKSK 216
+S EA + GV+D++L R + E++ K
Sbjct: 121 LSPDEALELGVIDEILTKRPESEQEKK 147
>gi|255542730|ref|XP_002512428.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223548389|gb|EEF49880.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 325
Score = 122 bits (306), Expect = 4e-26, Method: Composition-based stats.
Identities = 61/174 (35%), Positives = 96/174 (55%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIY 93
RIV++ + + L+ A+L++L+ +P++ I LYINS G G+ T G AIY
Sbjct: 123 RIVYIGMPLVPAVTELVVAELMYLQWMDPKEPIYLYINSTGTTRDDGETVGMETEGFAIY 182
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDI 151
D+M +K I T +G A LLL+AG KG RF +P+A+ ++ QP SG ASD+
Sbjct: 183 DSMMQLKNEIHTVAVGAAIGQACLLLAAGTKGKRFMMPHAKAMIQQPKVPSSGLMAASDV 242
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A++ V + L E+ K+ + E V + R M + A ++GV+DK+L
Sbjct: 243 LIRAKEAVTNRDTLVELLAKHTENSVETVANAMKRPFYMDSRRAKEFGVIDKIL 296
>gi|169142885|ref|YP_001687308.1| clp protease proteolytic subunit [Oenothera glazioviana]
gi|159895497|gb|ABX10062.1| clp protease proteolytic subunit [Oenothera glazioviana]
Length = 250
Score = 122 bits (305), Expect = 4e-26, Method: Composition-based stats.
Identities = 56/175 (32%), Positives = 101/175 (57%), Gaps = 2/175 (1%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+ L + R +F+ I +A I ++FL ++ + + +INSPGG+ AG+
Sbjct: 27 WVDLYNVLYRTRSIFLGDAIHFEVANHIAGLMIFLTIQDATQNLYFFINSPGGMAVAGLL 86
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QAS 149
IYDTMQ++ PP+ T +G ASM S LL GE R PNAR+++HQP ++ +
Sbjct: 87 IYDTMQYVTPPVYTLGLGVLASMASFLLVGGETSKRLMGPNARVMIHQPESDYTHKDKTL 146
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+++ + ++ I+ + +Y++ E + L+R++ M+A+EA +G+VD +
Sbjct: 147 EVQLDSGEVEDIRNMVIRVYLERTRLPREVLNDHLERNYFMTATEAKYYGIVDDI 201
>gi|217074128|gb|ACJ85424.1| unknown [Medicago truncatula]
Length = 322
Score = 122 bits (305), Expect = 5e-26, Method: Composition-based stats.
Identities = 58/174 (33%), Positives = 94/174 (54%), Gaps = 11/174 (6%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAIY 93
RIV++ + + L+ A+L+FL+ P++ I +YINS G + G AIY
Sbjct: 119 RIVYIGMPLVPAVTELVIAELMFLQWMAPKEPIYIYINSTGTTRADGETVAMESEGFAIY 178
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS--GQASDI 151
D M +K I+T +G A LLLSAG KG R+ P+A+ ++ QP S ASD+
Sbjct: 179 DAMMQMKTEINTVALGAAVGQACLLLSAGTKGRRYMTPHAKAMIQQPRVPSSGLRPASDV 238
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
HA++++ + L ++ K+ + E V + R + M A A ++GV+DK+L
Sbjct: 239 LIHAKEVMVNRDTLVKLLAKHTENSEETVSNVMKRSYYMDALLAKEFGVIDKIL 292
>gi|322794945|gb|EFZ17835.1| hypothetical protein SINV_12459 [Solenopsis invicta]
Length = 130
Score = 121 bits (304), Expect = 5e-26, Method: Composition-based stats.
Identities = 77/130 (59%), Positives = 107/130 (82%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+ D +A+ + AQLLFL++E+ + I LYINSPGG VTAG+ IYDTMQ++ PPIST+C+GQ
Sbjct: 1 VTDVVASAVIAQLLFLQSESSKNPIHLYINSPGGSVTAGLGIYDTMQYVLPPISTWCVGQ 60
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV 170
A SM SLLL+AG KGMR +LPNARI++HQPSGG GQA+DI+ A +I+K+K+++NE+YV
Sbjct: 61 ACSMASLLLAAGTKGMRHSLPNARIMIHQPSGGVQGQATDIQIQATEILKLKQQINELYV 120
Query: 171 KNCGKTYEEV 180
K+ G+ +E+
Sbjct: 121 KHTGQNLDEI 130
>gi|323491854|ref|ZP_08097029.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
gi|323313989|gb|EGA67078.1| ATP-dependent Clp protease proteolytic subunit [Vibrio brasiliensis
LMG 20546]
Length = 156
Score = 121 bits (303), Expect = 7e-26, Method: Composition-based stats.
Identities = 59/156 (37%), Positives = 100/156 (64%), Gaps = 1/156 (0%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +C L +L++ + + +I++ INSPGG V +G +I+D ++F+ + G AS G
Sbjct: 1 AEKVCRSLAYLDSVSNE-DITIMINSPGGHVESGDSIHDMIKFVTSKVIIIGTGYVASAG 59
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
+ + A EK R+ALPN R ++HQPSGG GQ SDI ++I K+KRR+ ++ G+
Sbjct: 60 THIYLAAEKCNRYALPNTRFMIHQPSGGSQGQVSDILIQMEEISKMKRRIAKVISDATGQ 119
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++V + +DRDH M+A EA D+G+V++++ S+ +
Sbjct: 120 DMDKVLEDIDRDHWMTAQEAVDYGIVNEIIESQQQL 155
>gi|283050532|gb|ADB07680.1| ATP-dependent Clp protease proteolytic subunit [Phyllostachys
aurea]
Length = 180
Score = 121 bits (303), Expect = 9e-26, Method: Composition-based stats.
Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 1/157 (0%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
+I + I +++L E+ +I L+INSPGG + +GMAI+DTMQ + P I T C+
Sbjct: 1 QEIRCEVTNHITGLMVYLSIEDGISDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICL 60
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNE 167
G AASM S +L GE R A P+ARI+LHQP+ + + + +++ K++ +
Sbjct: 61 GMAASMASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITR 120
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+Y GK + V + ++RD MSA EA +G+VD V
Sbjct: 121 VYALRTGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 157
>gi|166201981|gb|ABY84447.1| ATP-dependent protease proteolytic subunit [Oenothera flava subsp.
taraxacoides]
Length = 236
Score = 120 bits (302), Expect = 9e-26, Method: Composition-based stats.
Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 5/188 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + +P + + E D+Y+ L + R VF+ +++ ++ I ++FL E+
Sbjct: 1 MPIGIPKIPFRIPGEEDASWIDLYNGLYRNRSVFLGQEVDYEISNHIAGLMIFLSIEDAN 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
K++ +INSPGG+ G+ IYDTMQF+KP + T +G A MGS LL GE R A PN
Sbjct: 61 KDLFFFINSPGGLAIPGLGIYDTMQFVKPHVYTLGLGLXAXMGSFLLVGGEITKRLASPN 120
Query: 133 ARILLHQP--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
R+++HQP S A+++ ++++ I+ + +YV+ G + L+R+ M
Sbjct: 121 VRVMIHQPASSYTAKDPAAEVFEESEEVEAIREMVLRVYVQRTGNPPGVINDHLERNIFM 180
Query: 191 SASEACDW 198
SA+EA +
Sbjct: 181 SATEAKYY 188
>gi|2342674|gb|AAB70396.1| Similar to ATP-dependent Clp protease (gb|D90915). EST gb|N65461
comes from this gene [Arabidopsis thaliana]
Length = 292
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/180 (28%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 34 DIYSRLLKERIVFVTGQIEDH---------MATLICAQLLFLEAENPQKEISLYINSPGG 84
D+ S LL RIV++ +D + L+ A+L++L+ +P++ I +YINS G
Sbjct: 121 DLPSMLLDGRIVYIGMPTDDDIFCFQLVPAVTELVVAELMYLQWLDPKEPIYIYINSTGT 180
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
G + T C+G A LLLSAG KG RF +P+A F
Sbjct: 181 TRDDG-----------ETVHTVCVGAAIGQACLLLSAGTKGKRFMMPHA----KGEESEF 225
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I ++ + L E+ K+ G + E V + R + M A +A ++GV+D+V
Sbjct: 226 DYFIFLIPVMQLQVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRV 285
>gi|63055010|gb|AAY29043.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium longum subsp. suis]
Length = 160
Score = 120 bits (300), Expect = 2e-25, Method: Composition-based stats.
Identities = 61/120 (50%), Positives = 90/120 (75%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
++P VE+T G ++ D YSRL ++RI+F+ Q++D A + AQLL LE+++P +++ +
Sbjct: 41 IMPQFVEKTPYGMKTQDAYSRLFEDRIIFLGVQVDDASADDVMAQLLVLESQDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL++G KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLASGTKGKRLMLPNARVLI 160
>gi|121607361|ref|YP_995168.1| endopeptidase Clp [Verminephrobacter eiseniae EF01-2]
gi|121552001|gb|ABM56150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Verminephrobacter eiseniae EF01-2]
Length = 229
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 58/204 (28%), Positives = 93/204 (45%), Gaps = 31/204 (15%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
R VF+ G I+ MA QL L + N I ++I+SPGG V +G I+D ++FI P
Sbjct: 27 RKVFIIGTIDHKMAKEAVQQLHILASINDD-PIYVFISSPGGHVESGDLIFDAIRFITPK 85
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS------GGFSGQASDI----- 151
+ G AS G+L+ A +K R++LPN LLH ++ A D
Sbjct: 86 VIVVSSGWVASAGALIYVAADKENRYSLPNTHFLLHMKEIIPAGEMTYTETADDRAARER 145
Query: 152 -------------------ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
H ++ RLN I+ + G+T E++ D MSA
Sbjct: 146 FAQFVSSSYRKKPPEPVNKSLHEYRTNVMRARLNRIFAEATGQTLEKITADTGHDFWMSA 205
Query: 193 SEACDWGVVDKVLMSRIDIEEKSK 216
+A ++G+V ++++S +I + K
Sbjct: 206 EQAVEYGLVHEIIVSEKEIRSQKK 229
>gi|159464779|ref|XP_001690619.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158280119|gb|EDP05878.1| inactive subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 415
Score = 119 bits (299), Expect = 2e-25, Method: Composition-based stats.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 11/187 (5%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM--------- 90
+RIV++ + + L+ A+LL+LE + I + INS G G
Sbjct: 57 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 116
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQA 148
A+ TM FIK PIST MG A ++LS G KG R +LP++ ++ QP QA
Sbjct: 117 ALTSTMGFIKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQA 176
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
++ ++++ KR L ++ G ++++ + R M +A ++G++D+++
Sbjct: 177 IEVHIKWREVLDYKRELLRMFSLGTGLPVDKLDADMQRPLYMRPQDALEYGIIDEIIEPN 236
Query: 209 IDIEEKS 215
D EK+
Sbjct: 237 EDKAEKA 243
>gi|293418508|ref|ZP_06660943.1| Clp protease [Escherichia coli B088]
gi|291325036|gb|EFE64451.1| Clp protease [Escherichia coli B088]
Length = 102
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 53/102 (51%), Positives = 79/102 (77%)
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNE 167
MGQAASMG+ LL+AG KG RF LPN+R+++HQP GG+ GQA+DIE HA++I+K+K R+NE
Sbjct: 1 MGQAASMGAFLLTAGAKGKRFCLPNSRVMIHQPLGGYQGQATDIEIHAREILKVKGRMNE 60
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ + G++ E++E+ +RD +SA EA ++G+VD +L R
Sbjct: 61 LMALHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 102
>gi|148908273|gb|ABR17251.1| unknown [Picea sitchensis]
Length = 158
Score = 118 bits (297), Expect = 3e-25, Method: Composition-based stats.
Identities = 50/132 (37%), Positives = 81/132 (61%)
Query: 83 GGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG 142
G T A+YDTM+++KPPI T C+G A SLLL+AG KG R +LP++ I++ QP
Sbjct: 15 LGYETEAFAVYDTMRYVKPPIFTLCIGNAWGEASLLLAAGAKGNRASLPSSTIMIKQPIA 74
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
GQA+DI+ +++ +K L +Y ++ G E++E+ + R S EA ++G++D
Sbjct: 75 QVRGQATDIDLARKEVRNVKNELVALYARHTGHPKEKIEQDIRRPKYFSPQEAIEYGIID 134
Query: 203 KVLMSRIDIEEK 214
KV+ S E++
Sbjct: 135 KVIYSDKGTEDR 146
>gi|115452971|ref|NP_001050086.1| Os03g0344900 [Oryza sativa Japonica Group]
gi|113548557|dbj|BAF12000.1| Os03g0344900 [Oryza sativa Japonica Group]
Length = 349
Score = 118 bits (297), Expect = 4e-25, Method: Composition-based stats.
Identities = 56/182 (30%), Positives = 95/182 (52%), Gaps = 19/182 (10%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + L+ AQL++LE N ++ + +YINS P G+ + G AIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 94 DTMQFIKP---PISTFCMGQAASMGSLLLSAGEKGMRFALPNA-------RILLHQPSGG 143
D M +K I T C+G AA L+L+AG+KG R+ P+A I +
Sbjct: 199 DAMMRMKTEKIRIHTLCIGAAAGHACLVLAAGKKGKRYMFPHAKDSIMPAMIQQPRIPSY 258
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
QASD+ A+++V + L + ++ G E+++K + M + +A ++GV+DK
Sbjct: 259 GMMQASDVVIRAKEVVHNRNTLVRLLARHTGNPPEKIDKVMRGPFYMDSLKAKEFGVIDK 318
Query: 204 VL 205
+L
Sbjct: 319 IL 320
>gi|307108088|gb|EFN56329.1| hypothetical protein CHLNCDRAFT_144777 [Chlorella variabilis]
Length = 315
Score = 118 bits (296), Expect = 5e-25, Method: Composition-based stats.
Identities = 60/202 (29%), Positives = 98/202 (48%), Gaps = 28/202 (13%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV---------TAGMAIY 93
RIV++ + + LI A++L+L+ ++ K + LYINS G T G AIY
Sbjct: 100 RIVYLGMPLVPAVTELIIAEMLYLQYKDRTKPMYLYINSTGTTRADGETVGFETEGTAIY 159
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQASDI 151
DTM F+K + T +G A +LLSAGEKG RF L +A +LHQP QA +I
Sbjct: 160 DTMCFVKNEVHTVGVGVAIGQSCMLLSAGEKGKRFMLEHATAMLHQPRVPPTGQRQAIEI 219
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK-----------------TLDRDHIMSASE 194
+ ++++ K+ + I + G + ++++K + R M ++
Sbjct: 220 QIKWREVLAQKQNMLAILSRTTGHSPDKLDKASAAGGGWWPGLALGAGDMQRPLYMQPAD 279
Query: 195 ACDWGVVDKVLMSRIDIEEKSK 216
A +GV+D V+ I + K
Sbjct: 280 ALAYGVIDGVVTPEKKIIDDVK 301
>gi|255025053|ref|ZP_05297039.1| ATP-dependent Clp protease proteolytic subunit [Listeria
monocytogenes FSL J1-208]
Length = 117
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 55/116 (47%), Positives = 81/116 (69%)
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
F+K + T MG AASMGS LL+AG G RFALPNA I++HQP GG GQA++IE A+
Sbjct: 1 NFVKADVQTIGMGMAASMGSFLLTAGASGKRFALPNAEIMIHQPLGGAQGQATEIEIAAR 60
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I+KIK R+N I + G+ YE + + DRD+ M+A EA D+G++D +++++ ++
Sbjct: 61 HILKIKERMNTIMAEKTGQPYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLK 116
>gi|139437300|ref|ZP_01771460.1| Hypothetical protein COLAER_00439 [Collinsella aerofaciens ATCC
25986]
gi|133776947|gb|EBA40767.1| Hypothetical protein COLAER_00439 [Collinsella aerofaciens ATCC
25986]
Length = 205
Score = 118 bits (295), Expect = 6e-25, Method: Composition-based stats.
Identities = 56/194 (28%), Positives = 104/194 (53%), Gaps = 4/194 (2%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
P+ + ++ RG IY +L R + V G IE MA +C Q+ L+A +P + I++++
Sbjct: 11 PLTMRESARGITLTSIYDEMLARRELSVMGNIETPMAHDLCQQIRLLDATDPSRPITIFV 70
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
S GG V +G+AIYD M+ PI T C+ AASMG+++ G+ P+A +++H
Sbjct: 71 ASAGGSVRSGLAIYDAMRLASCPIRTVCLEFAASMGAVIFMGGD--DCRMAPHAELMIHD 128
Query: 140 P--SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
P G G A ++ ++ +++ ++ L +I G T + ++ +D +SA A +
Sbjct: 129 PLIPQGAGGSALALQETSRRLMQTRKTLTQILSDRSGLTPKRIQSLTAKDTYLSAERAVE 188
Query: 198 WGVVDKVLMSRIDI 211
G ++L + ++
Sbjct: 189 LGFAHEILSTTKEV 202
>gi|302838584|ref|XP_002950850.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
gi|300263967|gb|EFJ48165.1| hypothetical protein VOLCADRAFT_74777 [Volvox carteri f.
nagariensis]
Length = 421
Score = 117 bits (294), Expect = 9e-25, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 91/187 (48%), Gaps = 11/187 (5%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM--------- 90
+RIV++ + + L+ A+LL+LE + I + INS G G
Sbjct: 59 FDQRIVYLGMPLVPAVTELMVAELLYLEKQGATLPIEMLINSSGTTRQDGEILSFDSEGV 118
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQA 148
A+ TM F+K PIST MG A ++LS G KG R +LP++ ++ QP QA
Sbjct: 119 ALTSTMGFVKNPISTVNMGLAVGWSCVVLSFGRKGWRKSLPHSLAMIQQPRVPPTGQRQA 178
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
++ ++++ KR L + G ++++ + R M +A D+G++D+++
Sbjct: 179 IEVHIKWREVLDYKRELLRMMSIGTGLPVDKLDADMQRPLYMRPRDALDYGIIDEIIQPN 238
Query: 209 IDIEEKS 215
+ EK+
Sbjct: 239 AEKAEKA 245
>gi|322708247|gb|EFY99824.1| ATP-dependent Clp protease proteolytic subunit 1 [Metarhizium
anisopliae ARSEF 23]
Length = 152
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/147 (48%), Positives = 99/147 (67%), Gaps = 7/147 (4%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VT+GMAIYDTM +IK P+ST C+G AASM ++LL+ GE G RFALP++ I+
Sbjct: 1 MYINSPGGSVTSGMAIYDTMTYIKSPVSTVCVGGAASMAAILLAGGEAGKRFALPHSSIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK-------TYEEVEKTLDRDHI 189
+HQP GG GQASDI +A I +I+ + N+I + K + EEV ++RD
Sbjct: 61 IHQPLGGTRGQASDILIYANQIQRIREQSNKIMQYHLNKAKGTDKYSLEEVNDMMERDKY 120
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKSK 216
+S EA + GV+D++L R D +E +
Sbjct: 121 LSVDEALELGVIDEILTKRTDKKEGQE 147
>gi|261755075|ref|ZP_05998784.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 3 str. 686]
gi|261744828|gb|EEY32754.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brucella suis
bv. 3 str. 686]
Length = 109
Score = 117 bits (293), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/109 (67%), Positives = 94/109 (86%)
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNE 167
MGQAASMGSLLL+AG G R+ALPNARI++HQPSGGF GQASDIERHAQDI+K+KRRLNE
Sbjct: 1 MGQAASMGSLLLTAGATGHRYALPNARIMVHQPSGGFQGQASDIERHAQDIIKMKRRLNE 60
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
IYVK+ G+ Y+ +E+TLDRDH M+A EA ++G++DKV+ +R ++SK
Sbjct: 61 IYVKHTGRDYDTIERTLDRDHFMTAQEALEFGLIDKVVEARDVSADESK 109
>gi|63055006|gb|AAY29041.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium dentium]
Length = 160
Score = 117 bits (292), Expect = 1e-24, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQDRY--VLPQFEEKTPYGFKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILL 137
PNAR+L+
Sbjct: 154 PNARVLI 160
>gi|63055016|gb|AAY29046.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium adolescentis]
Length = 160
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 61/127 (48%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
++ + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQNRY--VLPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDTSADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLML 153
Query: 131 PNARILL 137
PNAR+L+
Sbjct: 154 PNARVLI 160
>gi|63055020|gb|AAY29048.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium animalis subsp. lactis DSM 10140]
Length = 160
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 60/120 (50%), Positives = 87/120 (72%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+VP E+T G ++ + Y+RL +RI+F+ Q++D A I AQLL LE+ +P +++ +
Sbjct: 41 VVPEFTERTPYGMKTQNPYTRLFDDRIIFLGVQVDDTSADDIMAQLLVLESMDPNRDVMM 100
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS +++L+AG KG R LPNAR+L+
Sbjct: 101 YINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAIILAAGTKGKRLMLPNARVLI 160
>gi|116198401|ref|XP_001225012.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178635|gb|EAQ86103.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 155
Score = 116 bits (291), Expect = 2e-24, Method: Composition-based stats.
Identities = 63/145 (43%), Positives = 98/145 (67%), Gaps = 7/145 (4%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V++G+AIYDTM +IK P+ST C+G AASM ++L+ GE G R+ALP++ I+
Sbjct: 1 MYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGGAASMAAILMIGGEPGKRYALPHSSIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY-------EEVEKTLDRDHI 189
+HQP GG GQA+DI +A I +++ +LN I K+ K+ + V ++RD
Sbjct: 61 VHQPLGGTRGQAADILIYATQIQRLREQLNRIVQKHINKSLGYEKYDMQAVNDMMERDKY 120
Query: 190 MSASEACDWGVVDKVLMSRIDIEEK 214
++A EA + G++D++L R ++K
Sbjct: 121 LTAEEAKEMGIIDEILHKREKGDDK 145
>gi|228991606|ref|ZP_04151550.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|228768175|gb|EEM16794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
Length = 111
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 54/111 (48%), Positives = 75/111 (67%)
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
IKP + T CMG AAS G+LLL AG KG RFALPN+ I++HQP GG GQA++IE A+
Sbjct: 1 MIKPDVQTLCMGFAASFGALLLLAGAKGKRFALPNSEIMIHQPLGGVKGQATEIEITAKR 60
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
I+K+K +N+I G+ E+V +RD+ M+A EA +G+VD V+ +
Sbjct: 61 ILKLKHDINKIISDRTGQPIEKVALDTERDYFMTAEEAKIYGIVDAVIEKK 111
>gi|61807242|gb|AAX55773.1| hypothetical protein [Clostridium hathewayi]
Length = 139
Score = 116 bits (290), Expect = 2e-24, Method: Composition-based stats.
Identities = 52/85 (61%), Positives = 71/85 (83%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ LVP V+E T++GERSYD++SRLLK+RI+F+ ++ D A L AQ+LFLEAE+P K+I
Sbjct: 1 MSLVPNVIETTSKGERSYDLFSRLLKDRIIFLGEEVNDETARLAVAQMLFLEAEDPSKDI 60
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIK 100
S YINSPGG +TAG+AIYDTM++I+
Sbjct: 61 SFYINSPGGSITAGLAIYDTMRYIR 85
>gi|222139910|ref|YP_002519978.1| ATP-dependent Clp protease proteolytic subunit [Ephedra equisetina]
gi|220983579|dbj|BAH11346.1| ATP-dependent Clp protease proteolytic subunit [Ephedra equisetina]
Length = 221
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 94/171 (54%), Gaps = 5/171 (2%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAEN----PQKEISLYINSPGGVVTAGMAIYD 94
+ + R +F+ +++ + ++ LL+L ++ ++I +YINS GG + G++I+D
Sbjct: 1 MSRTRCIFLGQPVDEDIGSIFVGILLYLFIDDIRKGKSRQIFMYINSCGGAILPGLSIFD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASDIER 153
M ++ I T +G AS +L+LSAG G R P++RI++HQP A +
Sbjct: 61 IMLQLRETIHTIGLGLVASTATLVLSAGTFGFRNTGPHSRIMIHQPRASLRDGPAWLFAK 120
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
A + ++++ + + Y + E +E LD++ MS EA D+G+VD+V
Sbjct: 121 DAFFVQQLRKMIVQCYCLRTPQFEELIENALDKNTYMSPEEAVDFGLVDRV 171
>gi|63055018|gb|AAY29047.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium cuniculi]
Length = 152
Score = 115 bits (289), Expect = 4e-24, Method: Composition-based stats.
Identities = 62/135 (45%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 3 FEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQ 62
F A + +D + +VP E+T G + + Y+RL +RI+F+ Q++D A I AQ
Sbjct: 20 FRAAADRMPQDRY--IVPEFEEKTPYGYKRQNPYTRLFDDRIIFMGVQVDDTTADDIMAQ 77
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
LL LE+ +P +++ +YINSPGG +TA AIYDTM +I+P + T C+GQAAS ++LL+AG
Sbjct: 78 LLVLESLDPNRDVMMYINSPGGSMTAMTAIYDTMNYIQPDVQTVCLGQAASAAAILLAAG 137
Query: 123 EKGMRFALPNARILL 137
KG R LPNAR+L+
Sbjct: 138 TKGKRLILPNARVLI 152
>gi|85090147|ref|XP_958279.1| ATP-dependent Clp protease proteolytic subunit 1 [Neurospora crassa
OR74A]
gi|28919624|gb|EAA29043.1| ATP-dependent Clp protease proteolytic subunit 1 [Neurospora crassa
OR74A]
gi|28950018|emb|CAD70773.1| related to endopeptidase Clp [Neurospora crassa]
Length = 158
Score = 115 bits (288), Expect = 5e-24, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 96/147 (65%), Gaps = 7/147 (4%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V++G+AIYDTM +IK P+ST C+G AASM ++LL GE G R+ LP++ ++
Sbjct: 1 MYINSPGGEVSSGLAIYDTMTYIKSPVSTVCVGAAASMAAVLLIGGEPGKRYVLPHSTVM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK-------TYEEVEKTLDRDHI 189
+HQP GG GQASDI +A I +I+ ++N+I + K + ++RD
Sbjct: 61 VHQPLGGTRGQASDILIYANQIQRIREQINKIVQSHVNKAFGYEKYDLAAISDMMERDKY 120
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKSK 216
++A EA + GVVD++L R+ E + K
Sbjct: 121 LTAEEAVELGVVDQILDRRVKDEAEKK 147
>gi|166201972|gb|ABY84442.1| ATP-dependent protease proteolytic subunit [Silene conoidea]
Length = 231
Score = 115 bits (287), Expect = 5e-24, Method: Composition-based stats.
Identities = 61/196 (31%), Positives = 94/196 (47%), Gaps = 28/196 (14%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I + L ++RI+ + +I+ + I LL L E+ K+ +L+INS GG + IYD
Sbjct: 26 IQNFLYEKRILLIFEEIKPKVTCEITGLLLCLSNEDEYKDFTLFINSAGGKTRDALPIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS--------- 145
TMQ + P + T +G AASMG+L+L GE G R A PN RI +H P+ F
Sbjct: 86 TMQVVAPAVRTVGIGVAASMGALILLGGEMGKRTASPNCRIKIHSPARAFYTTDSDSDSD 145
Query: 146 -------------------GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
D ++++++ L +IY K K +EK L
Sbjct: 146 SDTDKKKKEKDPKKKKEQNRSVEDFSDAVGEMLRLREELVKIYAKRTQKPISVIEKDLAX 205
Query: 187 DHIMSASEACDWGVVD 202
D MS+ EA ++G++D
Sbjct: 206 DLFMSSEEAKEYGIID 221
>gi|167042802|gb|ABZ07520.1| putative Clp protease [uncultured marine microorganism
HF4000_ANIW137I15]
Length = 122
Score = 114 bits (286), Expect = 8e-24, Method: Composition-based stats.
Identities = 56/118 (47%), Positives = 90/118 (76%), Gaps = 1/118 (0%)
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++P IST C+GQAASMG+LLL+AG + RF+LPNARI++HQP G GQA+DIE HA++I
Sbjct: 1 MRPDISTICIGQAASMGALLLTAGAQAKRFSLPNARIMIHQPLAGVQGQATDIEIHAREI 60
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++++ L+ I V++ G+T + + +RD M+ EA ++G++D V++SR ++++KSK
Sbjct: 61 LRMRETLDGILVRHSGQTLKRIHTDTERDFFMTGIEAKEYGLIDDVIVSR-ELKQKSK 117
>gi|67525029|ref|XP_660576.1| hypothetical protein AN2972.2 [Aspergillus nidulans FGSC A4]
gi|40744367|gb|EAA63543.1| hypothetical protein AN2972.2 [Aspergillus nidulans FGSC A4]
gi|259486082|tpe|CBF83641.1| TPA: ATP-dependent Clp protease, proteolytic subunit ClpP
(AFU_orthologue; AFUA_3G08330) [Aspergillus nidulans
FGSC A4]
Length = 135
Score = 114 bits (285), Expect = 8e-24, Method: Composition-based stats.
Identities = 57/125 (45%), Positives = 90/125 (72%), Gaps = 4/125 (3%)
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
M +I P+ST C+GQAASMGSLLL G+ G R+ LP++ I++HQPSGG+ GQA+DI HA
Sbjct: 1 MTYIASPVSTICVGQAASMGSLLLCGGQAGQRYCLPHSSIMIHQPSGGYFGQATDIAIHA 60
Query: 156 QDIVKIKRRLNEIYVKN-CGK---TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++I++++ +LN+IY ++ GK + +E+EK ++RD+ M A EA + G+VD++L R+
Sbjct: 61 KEILRVRHQLNQIYKRHLTGKKELSLDEIEKLMERDYFMGAREALELGIVDEILDRRVKT 120
Query: 212 EEKSK 216
+
Sbjct: 121 GPDGE 125
>gi|153217638|ref|ZP_01951319.1| Clp protease [Vibrio cholerae 1587]
gi|124113417|gb|EAY32237.1| Clp protease [Vibrio cholerae 1587]
Length = 97
Score = 114 bits (285), Expect = 9e-24, Method: Composition-based stats.
Identities = 47/97 (48%), Positives = 70/97 (72%)
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
MG+ LL+ G G R+ LPN+R+++HQP GGF GQASDI+ HAQ+I+ IK +LN + ++
Sbjct: 1 MGAFLLAGGAPGKRYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKNKLNRLLAEHT 60
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
G+ E +E+ DRD+ MSA +A ++G+VD VL R +
Sbjct: 61 GQPIEVIERDTDRDNFMSADQAVEYGLVDAVLKHRGE 97
>gi|308311726|gb|ADO27637.1| clpP [Rhizanthella gardneri]
Length = 157
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 53/150 (35%), Positives = 96/150 (64%), Gaps = 1/150 (0%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+RL +ER++F+ +++ ++ + +++L E+ +++ L+INSPGG V G++
Sbjct: 8 WIDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNTRDLHLFINSPGGWVIPGIS 67
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASD 150
IYDTMQF+ P + T C+G AAS+GSL+L GE R A P+AR+++HQP+ F Q +
Sbjct: 68 IYDTMQFVPPAVHTVCIGLAASIGSLILVGGEITKRIAFPHARVMIHQPASSFYESQVGE 127
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
A++ +K++ + ++YV+ K +
Sbjct: 128 FILEAEEFLKLRETILKVYVQRTSKPLLVI 157
>gi|197303514|ref|ZP_03168553.1| hypothetical protein RUMLAC_02236 [Ruminococcus lactaris ATCC
29176]
gi|197297512|gb|EDY32073.1| hypothetical protein RUMLAC_02236 [Ruminococcus lactaris ATCC
29176]
Length = 334
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 82/172 (47%), Gaps = 4/172 (2%)
Query: 41 KERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ERI+F+ G I + + L E +I+L+INSPGG A I++ +
Sbjct: 22 EERILFMNGVIAEDSWFDDDVTPALFKDELNAGTGDITLWINSPGGDCVAAAQIFNMLSE 81
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG + P + +++H P+ G ++++ + +
Sbjct: 82 YPGKVTVKIDGLAASAASVIAMAGTEVWM--SPVSMMMIHNPATVAWGDHVEMKKAMELL 139
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + YV+ G++ ++ +D + M A++A + G D +L + +
Sbjct: 140 DAVKESIINAYVRKTGQSRAKLSHLMDAETWMDANKAVELGFADDILFQKEE 191
>gi|154316085|ref|XP_001557364.1| ATP-dependent Clp protease proteolytic subunit [Botryotinia
fuckeliana B05.10]
gi|150846414|gb|EDN21607.1| ATP-dependent Clp protease proteolytic subunit [Botryotinia
fuckeliana B05.10]
Length = 124
Score = 113 bits (284), Expect = 1e-23, Method: Composition-based stats.
Identities = 62/122 (50%), Positives = 90/122 (73%), Gaps = 2/122 (1%)
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
M +IK P+ST C+GQAASMGSLLL GE G RF LP++ I++HQPSGG+SGQA+DI HA
Sbjct: 1 MTYIKSPVSTVCVGQAASMGSLLLCGGEPGKRFCLPHSSIMIHQPSGGYSGQATDIAIHA 60
Query: 156 QDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+I+++++ LNEIY ++ K + EE+E+ ++RD +SA EA + G+VD++L R +
Sbjct: 61 TEILRVRKSLNEIYKRHLTKEHSLEEIERMMERDKFLSAQEALEMGIVDEILDRREPEGK 120
Query: 214 KS 215
K
Sbjct: 121 KE 122
>gi|161899373|ref|XP_001712913.1| Clp protease [Bigelowiella natans]
gi|75756407|gb|ABA27301.1| Clp protease [Bigelowiella natans]
Length = 207
Score = 113 bits (283), Expect = 1e-23, Method: Composition-based stats.
Identities = 64/163 (39%), Positives = 103/163 (63%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
I+ + G ++D++A LI + LF ++ + KE++L INSPGG VTAG+ I D + ++K
Sbjct: 45 ILSLYGGVDDNIADLIFKKALFTKSVDNNKELTLLINSPGGSVTAGLKIMDALNYVKVRN 104
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+T C+ AASMG+ LL++G + R AL N+RI++HQP GG G + +E A +I+ K
Sbjct: 105 NTVCLALAASMGAFLLASGSRNYRQALLNSRIMIHQPLGGAFGDSLGVEIQANEILYFKL 164
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
L+ C K E+ DRD+ MS+ +A ++G++DK+L
Sbjct: 165 VLSGYLSDFCRKPLNEILVDTDRDYFMSSKQATNYGLIDKILK 207
>gi|63055012|gb|AAY29044.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium magnum]
Length = 159
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/138 (44%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Query: 1 MSFEGCAKKDSEDVFLG-LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLI 59
M F+ A + +VP E+T G + + Y+RL +RI+++ Q++D A I
Sbjct: 22 MGFQRAADRMPMAPQNRYVVPEFEEKTPYGYKRQNPYTRLFDDRIIWLGVQVDDTSADDI 81
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
AQLL LE+ +P +++ +YINSPGG +TA AIYDTMQ+I+P + T C+GQAAS ++LL
Sbjct: 82 MAQLLVLESLDPNRDVMMYINSPGGSMTAMTAIYDTMQYIQPDVQTVCLGQAASAAAILL 141
Query: 120 SAGEKGMRFALPNARILL 137
+AG KG R LPNAR+L+
Sbjct: 142 AAGTKGKRLILPNARVLI 159
>gi|225677382|ref|ZP_03788351.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Muscidifurax uniraptor]
gi|225590572|gb|EEH11830.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Wolbachia
endosymbiont of Muscidifurax uniraptor]
Length = 118
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/106 (52%), Positives = 84/106 (79%)
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
C+GQAASMGSLLL+AG KG R++LP++RI++HQPSGG+ GQA+DIE HA +I+++K++LN
Sbjct: 2 CIGQAASMGSLLLAAGTKGKRYSLPHSRIMIHQPSGGYHGQATDIEIHANEILRVKKKLN 61
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+IY K+ G + +++E ++RD M EA G++D+V+ R DIE
Sbjct: 62 QIYEKHTGNSLKKIEGMMERDKFMDPEEARKIGLIDRVIAERTDIE 107
>gi|193875738|gb|ACF24505.1| chloroplast ATP-dependent Clp protease proteolytic subunit 3
[Gymnochlora stellata]
Length = 216
Score = 113 bits (282), Expect = 2e-23, Method: Composition-based stats.
Identities = 62/168 (36%), Positives = 97/168 (57%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+L + I+F+ G++ D +A I +++L K ++L INSPGG VT+G+A+YD+
Sbjct: 49 MLNKEILFLYGEVNDTIADTIIKNIIYLNNTTTTKNLTLMINSPGGSVTSGLAMYDSFNL 108
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ I T C+ AASMG+ LL +G KG R + RI++HQP GG G + IE A ++
Sbjct: 109 VDMHIGTTCIALAASMGAFLLGSGYKGKRNGFNHCRIMIHQPLGGIVGSFNQIESQANEL 168
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ K LN + +V + DRD+ MS+ EA +G++D VL
Sbjct: 169 LYYKLVLNSYISNFSSQAPVKVMRDCDRDYFMSSREAAKYGIIDNVLK 216
>gi|302665244|ref|XP_003024234.1| hypothetical protein TRV_01584 [Trichophyton verrucosum HKI 0517]
gi|291188281|gb|EFE43623.1| hypothetical protein TRV_01584 [Trichophyton verrucosum HKI 0517]
Length = 126
Score = 112 bits (281), Expect = 2e-23, Method: Composition-based stats.
Identities = 61/123 (49%), Positives = 93/123 (75%), Gaps = 3/123 (2%)
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
M +I+ P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA
Sbjct: 1 MTYIQSPVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHA 60
Query: 156 QDIVKIKRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++I++++ +LN+IY ++ GK T EE+EK ++RD+ M A EA + G+VD +L R+ +
Sbjct: 61 KEILRVRHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEALEMGIVDSILDRRMPSK 120
Query: 213 EKS 215
E+S
Sbjct: 121 EES 123
>gi|226292665|gb|EEH48085.1| ATP-dependent Clp protease proteolytic subunit [Paracoccidioides
brasiliensis Pb18]
Length = 137
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 59/119 (49%), Positives = 89/119 (74%), Gaps = 2/119 (1%)
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
M +I P+ST C+GQAASMGSLLL G G RF LP++ +++HQPSGG+ GQA+DI HA
Sbjct: 1 MTYISAPVSTICVGQAASMGSLLLCGGHPGKRFCLPHSSVMVHQPSGGYFGQATDIAIHA 60
Query: 156 QDIVKIKRRLNEIYVKNCGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++I++++R+LNEIY ++ K + +E+EK ++RD+ M A EA + G+VD++L RI +
Sbjct: 61 KEILRVRRQLNEIYKRHLKKEMSLDEIEKWMERDYFMGAKEALEMGIVDEILDRRIKPK 119
>gi|331003376|ref|ZP_08326878.1| Clp protease [Lachnospiraceae oral taxon 107 str. F0167]
gi|330412573|gb|EGG91959.1| Clp protease [Lachnospiraceae oral taxon 107 str. F0167]
Length = 201
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/184 (31%), Positives = 109/184 (59%), Gaps = 5/184 (2%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+TN G + ++ +R + ++G+I D A ++L L E+ + I++ INSPGG
Sbjct: 8 KTNNGITQVPLETKFFGKRCISISGEINDESAIDFTDKILELNIESCE-PITILINSPGG 66
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--G 142
+ +G+ +YD + K PI C G+A SMG++L + K R+ LPN+ ++LHQP G
Sbjct: 67 EINSGLLMYDAIVGSKAPIRMICRGKAYSMGAVLFACASK--RYMLPNSELMLHQPMLGG 124
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
SG AS I+ + +++ K++LN + ++ GK+ EE+++ + DH S +E+ ++ + D
Sbjct: 125 RVSGNASSIKSISDSMLETKKKLNSLLARHTGKSEEEIDEATNFDHYFSPTESIEFNLCD 184
Query: 203 KVLM 206
+++
Sbjct: 185 EIIE 188
>gi|297275903|ref|XP_001087805.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial [Macaca mulatta]
Length = 179
Score = 112 bits (281), Expect = 3e-23, Method: Composition-based stats.
Identities = 44/74 (59%), Positives = 58/74 (78%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
L L+P+VVEQT RGER+YDIYSRLL+ERIV V G I+D +A+L+ AQLLFL++E+ +
Sbjct: 53 ARALPLIPIVVEQTGRGERAYDIYSRLLRERIVCVMGPIDDSVASLVIAQLLFLQSESNK 112
Query: 73 KEISLYINSPGGVV 86
K I +YINSP +
Sbjct: 113 KPIHMYINSPESAM 126
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
E ++RD MS EA ++G++DKVL+ E
Sbjct: 123 ESAMERDRYMSPMEAQEFGILDKVLVHPPQDGEDE 157
>gi|166235795|gb|ABY85699.1| ATP-dependent protease proteolytic subunit [Silene fruticosa]
Length = 397
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 53/171 (30%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+Y+ +R++F+ ++++ +A + L++L E+ ++I L+INSPGG + AG+ +Y+
Sbjct: 219 LYTLTYHKRLLFLCDKLKNELANKLINLLIYLSTEDTTEDIFLFINSPGGFLGAGLGLYN 278
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE-R 153
T+QF+ P +ST +G A S+ + +L G R A P A +++HQP+ + I
Sbjct: 279 TIQFVPPQVSTIALGIAGSISAFVLVGGALSKRVAYPCAXVMMHQPASTKHKNKTRICVM 338
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ D++ I+ + +Y++ GKT + + + ++R MSA+EA G+VD V
Sbjct: 339 ESFDLLTIRDMITNVYIQRTGKTKQVIYEDMERPFFMSATEAQVHGIVDHV 389
>gi|210630760|ref|ZP_03296584.1| hypothetical protein COLSTE_00469 [Collinsella stercoris DSM 13279]
gi|210160356|gb|EEA91327.1| hypothetical protein COLSTE_00469 [Collinsella stercoris DSM 13279]
Length = 193
Score = 112 bits (280), Expect = 3e-23, Method: Composition-based stats.
Identities = 54/174 (31%), Positives = 93/174 (53%), Gaps = 3/174 (1%)
Query: 33 YDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
D+ S L R++ + Q+ + + + A +L LE ++P+ I+L ++SPGG V AG+ +
Sbjct: 20 LDVLSELYNSRVLMLNEQVTPAVCSQLIANMLVLERKDPEAPITLLVSSPGGDVYAGLGL 79
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF-SGQASDI 151
D M+ + P+ T G ASM S++L+ G R A P+ ILLHQ G Q +DI
Sbjct: 80 IDVMRDLSCPVDTVGYGLVASMASVILACGR--HRSAYPHTNILLHQLMTGAGMSQQTDI 137
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A ++ +L+E+ + + +EV + +RD A + GV+D+V+
Sbjct: 138 SIVANHAASLRAKLDEMLAERMSLSADEVHELTERDCWCDVGRALELGVIDEVI 191
>gi|303274128|ref|XP_003056387.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
gi|226462471|gb|EEH59763.1| ATP-dependent clp protease [Micromonas pusilla CCMP1545]
Length = 294
Score = 112 bits (280), Expect = 4e-23, Method: Composition-based stats.
Identities = 46/182 (25%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI-YDTMQFIK- 100
RIV++ + + LI ++LL+++ + + +YINS G G + Y K
Sbjct: 87 RIVYIGMPLVPAVTELIVSELLYMQYTDATRPCYIYINSTGCQRADGEVLPYSDNANNKV 146
Query: 101 -----------PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQ 147
I T G A ++LSAG KG RF +A +LHQP Q
Sbjct: 147 PHLRFAENFPLQQIYTVGTGVAIGQACMILSAGNKGKRFMTAHATAMLHQPRIPSTGQRQ 206
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A ++ +++++ K+ + +I G + E+++ + R ++A +A +G+VDKV+
Sbjct: 207 AIELHLKWKEVLEQKKAMVDILSLTTGHSKEKIDNDIQRPLYLTAKDAIAYGIVDKVVDK 266
Query: 208 RI 209
Sbjct: 267 NS 268
>gi|302502710|ref|XP_003013316.1| hypothetical protein ARB_00501 [Arthroderma benhamiae CBS 112371]
gi|291176879|gb|EFE32676.1| hypothetical protein ARB_00501 [Arthroderma benhamiae CBS 112371]
Length = 126
Score = 111 bits (278), Expect = 6e-23, Method: Composition-based stats.
Identities = 60/122 (49%), Positives = 92/122 (75%), Gaps = 3/122 (2%)
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
M +I+ P+ST C+GQAASMGSLLL GE G R+ LP++ +++HQPSGG+ GQA+DI HA
Sbjct: 1 MTYIQSPVSTICVGQAASMGSLLLCGGEAGKRYCLPHSSVMIHQPSGGYFGQATDIAIHA 60
Query: 156 QDIVKIKRRLNEIYVKN-CGK--TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++I++++ +LN+IY ++ GK T EE+EK ++RD+ M A EA + G+VD +L R+ +
Sbjct: 61 KEILRVRHQLNQIYKRHLTGKEMTLEEIEKLMERDYFMGAKEALEMGIVDSILDRRMPSK 120
Query: 213 EK 214
E+
Sbjct: 121 EE 122
>gi|255069967|ref|XP_002507065.1| predicted protein [Micromonas sp. RCC299]
gi|226522340|gb|ACO68323.1| predicted protein [Micromonas sp. RCC299]
Length = 247
Score = 111 bits (277), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/154 (35%), Positives = 91/154 (59%), Gaps = 3/154 (1%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP---PISTFCMGQA 111
+AT +CA+LL L E+P K+I L++N+ G I D M++I+ IS MG
Sbjct: 85 VATRVCAELLALSYEDPDKDIRLFVNATAGTQYCVQTILDMMEYIQSKGVDISVVGMGCV 144
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
A ++LL+AG KG R A+P+ RI+L QP GG SG + ++ A+++ + R ++ K
Sbjct: 145 AGPPAMLLAAGTKGKRLAMPSCRIILSQPLGGLSGTSYEVRIQAKELSRNARMQVAVFAK 204
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GK+++++ + L RD MS EA + ++D V+
Sbjct: 205 FTGKSFDDMGEYLVRDTYMSPQEAKELNLIDGVI 238
>gi|211970349|emb|CAR97864.1| C. elegans protein ZK970.2b, confirmed by transcript evidence
[Caenorhabditis elegans]
Length = 117
Score = 111 bits (277), Expect = 9e-23, Method: Composition-based stats.
Identities = 66/117 (56%), Positives = 86/117 (73%)
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I P+ST+ +GQA+SMGSLLL AGEKGMR ALPN+RI++HQPSGG G SDI A++
Sbjct: 1 MISAPVSTWVIGQASSMGSLLLCAGEKGMRSALPNSRIMVHQPSGGAQGTCSDIVIRAEE 60
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
I ++KRRLNEIYV + G +Y+E+EKTLDRD MSA EA +G+VD++ +
Sbjct: 61 ITRLKRRLNEIYVHHTGMSYDEIEKTLDRDRFMSAHEALKFGLVDQIETHNGSMPSD 117
>gi|212292629|gb|ACJ24246.1| hypothetical protein [Dunaliella viridis]
Length = 204
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 51/124 (41%), Positives = 77/124 (62%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
+ P VV E S D+++ LL++RI+F+ G + D +AT I LL LEA + +++I +
Sbjct: 78 ITPDVVVGKGEEETSIDLFNYLLRQRIIFIAGYVNDKVATQIVGALLALEAIDEEEDIRI 137
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
YINSPGG + + D ++ IKP + T +G S SL+L+AG KG RFA+ N RI++
Sbjct: 138 YINSPGGQPYSVFGVVDAIKSIKPDVQTLGLGACYSYASLILAAGSKGKRFAMKNTRIMM 197
Query: 138 HQPS 141
QP
Sbjct: 198 TQPM 201
>gi|254470249|ref|ZP_05083653.1| Clp protease [Pseudovibrio sp. JE062]
gi|211960560|gb|EEA95756.1| Clp protease [Pseudovibrio sp. JE062]
Length = 122
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 50/121 (41%), Positives = 76/121 (62%)
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
I+D ++FI+P + MG AS G+L+ + K RF N R LLHQPSGG G A+D
Sbjct: 1 MIHDMIKFIQPEVRILGMGWVASAGALIYVSVPKERRFCTQNTRFLLHQPSGGAGGMATD 60
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
IE A++I+K++ RLN+I+ G+ E +EK DRD+ MS E ++G+V KV+ + +
Sbjct: 61 IEIQAKEILKMRDRLNQIFADATGQPLERIEKDTDRDYWMSPDEGIEYGLVGKVINNVSE 120
Query: 211 I 211
+
Sbjct: 121 L 121
>gi|21449427|gb|AAM54134.1|AF514859_1 ATP-dependent Clp protease [Oryza sativa Indica Group]
Length = 191
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 48/126 (38%), Positives = 74/126 (58%), Gaps = 9/126 (7%)
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ---------P 140
M +YD M+F K IST C G AASMG+ LL+AG KG RF +PNARI++HQ
Sbjct: 1 MGVYDAMKFCKADISTVCFGLAASMGAFLLAAGTKGKRFCMPNARIMIHQPSGGAGGKNM 60
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
Q +++ ++++ K ++N+I + GK E++++ D+ MS EA D+G+
Sbjct: 61 LICAIWQVTEMGLQIREMMYEKIKINKILSRITGKPEEQIDEDTKFDYFMSPWEAKDYGI 120
Query: 201 VDKVLM 206
VD V+
Sbjct: 121 VDSVID 126
>gi|147821309|emb|CAN74592.1| hypothetical protein VITISV_041995 [Vitis vinifera]
Length = 429
Score = 110 bits (275), Expect = 1e-22, Method: Composition-based stats.
Identities = 40/93 (43%), Positives = 62/93 (66%)
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
SMG+ LLS G KG R++LPN+RI++HQP GG G +DI+ A +++ K LN +
Sbjct: 321 SMGAFLLSCGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLSYH 380
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G++ E++ + DRD MSA EA ++G++D V+
Sbjct: 381 TGQSLEKINQDTDRDFFMSAKEAKEYGLIDGVI 413
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 47/93 (50%), Positives = 65/93 (69%), Gaps = 6/93 (6%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 94 PMVQE------RFQSVVSQLFQHRIIRCGGAVDDDMANIIVAQLLYLDAVDPDKDIVMYV 147
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
NSPGG VTAGMAI+DTM+ I+P +ST C+G AA
Sbjct: 148 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAA 180
>gi|63055030|gb|AAY29053.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium pullorum]
Length = 139
Score = 110 bits (274), Expect = 2e-22, Method: Composition-based stats.
Identities = 63/138 (45%), Positives = 92/138 (66%), Gaps = 1/138 (0%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGAKGKRYLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G +D+ +A+ I+ +KR L E+ + G T EE+ + + DH +A +A ++
Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKRTLAELTAEQTGHTVEEIYRDNEYDHWFTAQQALEY 120
Query: 199 GVVDKVLMSRIDIEEKSK 216
G VDK++ + D +K
Sbjct: 121 GFVDKIVTT-PDTMSATK 137
>gi|166235707|gb|ABY85615.1| ATP-dependent protease proteolytic subunit [Silene conica]
Length = 247
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I + L ++RI+F+ +I+ + I LL L EN K+ +L+INS GG + IYD
Sbjct: 26 IQNFLYEKRILFIFEEIKPKVTCEITGLLLCLSNENEYKDFTLFINSAGGKTRDALPIYD 85
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS----- 149
TMQ + P + T +G AASMG+L+L GE G R A PN RI +H P+ F S
Sbjct: 86 TMQVVAPAVRTVGIGVAASMGALILLGGEMGKRAASPNCRIKIHLPASAFYTTDSDSNSD 145
Query: 150 -----------------------------------DIERHAQDIVKIKRRLNEIYVKNCG 174
D ++++++ +IY K
Sbjct: 146 SDSNSDSTSDSNSDTDKKKKEKDPKKKKEQSRSVEDFSDGVGEMLRLREEFVKIYAKRTQ 205
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K +EK L R MS+ EA +G++D L + D ++ K
Sbjct: 206 KPISVIEKDLARGLFMSSEEAKAYGIIDT-LHYKFDFKKTIK 246
>gi|237731146|ref|ZP_04561627.1| protease subunit of ATP-dependent Clp protease [Citrobacter sp.
30_2]
gi|226906685|gb|EEH92603.1| protease subunit of ATP-dependent Clp protease [Citrobacter sp.
30_2]
Length = 647
Score = 109 bits (273), Expect = 2e-22, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 7/165 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGYWGVTARQFVNDLKAL---GDITHINLHINSPGGDVFDGIAIFNALKHHGAA 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ G AASM S++ G N +++H+P G G A+D+ +A + K++
Sbjct: 68 ITVHIDGLAASMASVIAMVGNP--VIMPENTMMMIHKPWGFAGGDANDMRDYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
L Y + GKT EE+ LD + M E + G D+V S
Sbjct: 126 SVLIPAYAEKTGKTTEEIAAMLDDETWMDGKECLEHGFADQVTTS 170
>gi|32401338|gb|AAP80841.1| ATP-dependent Clp protease proteolytic subunit [Griffithsia
japonica]
Length = 114
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/113 (49%), Positives = 75/113 (66%), Gaps = 3/113 (2%)
Query: 16 LGL-VPMVVEQTNRGER--SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ + VP V+ + + DIY+RL +ERI+F+ +I+D +A I A +L+LE+E+
Sbjct: 1 MPIGVPKVLFRVPGAPQADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLESEDNS 60
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
K I LYINSPGG V AGMAIYDTM+ IK + T +G AASM S LL GEKG
Sbjct: 61 KPIYLYINSPGGSVIAGMAIYDTMKHIKSEVVTINVGLAASMASFLLGGGEKG 113
>gi|294460153|gb|ADE75659.1| unknown [Picea sitchensis]
Length = 254
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 60/148 (40%), Positives = 91/148 (61%), Gaps = 4/148 (2%)
Query: 17 GLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEIS 76
+ P ++ T G D+ S LL+ R+VF+ I +A + +QL+ L A +P +I
Sbjct: 110 PITPGIM--TPAGP--LDLMSVLLRSRVVFIGQPINAQVAQRVISQLMTLAAIDPDADIL 165
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+Y+N PGG + + +AIYD M +IKP + T C G AAS +LLL+ GEKGMR+A+PN+RI+
Sbjct: 166 MYLNCPGGSIYSILAIYDCMSWIKPKVGTVCFGVAASQAALLLAGGEKGMRYAMPNSRIM 225
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRR 164
+HQP GG G D+ R ++V +
Sbjct: 226 IHQPQGGCGGNIEDVWRQVNELVASRDE 253
>gi|63055022|gb|AAY29049.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium magnum]
Length = 139
Score = 109 bits (272), Expect = 3e-22, Method: Composition-based stats.
Identities = 63/137 (45%), Positives = 91/137 (66%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G +D+ A+ I+ +K+ L E+ + G T EE+ + + DH +A EA ++
Sbjct: 61 QPSGGIGGTTTDVRISAELIMNMKKTLAELTAEQTGHTVEEIYRDNEYDHWFTAQEALEY 120
Query: 199 GVVDKVLMSRIDIEEKS 215
G VDK++ + ++ K
Sbjct: 121 GFVDKLVSTPDTMQAKE 137
>gi|63055008|gb|AAY29042.1| predicted ATP-dependent Clp protease proteolytic subunit 2
[Bifidobacterium pullorum]
Length = 161
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 62/127 (48%), Positives = 91/127 (71%), Gaps = 2/127 (1%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+D + ++P E+T G + D Y+RL ++RI+F+ Q++D A I AQLL LE+++
Sbjct: 36 PQDRY--ILPQFEEKTPYGYKRQDPYTRLFEDRIIFMGVQVDDAAADDIMAQLLVLESQD 93
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P +++ +YINSPGG +TA AIYDTMQ+IKP + T C+GQAAS ++LL+AG KG R L
Sbjct: 94 PNRDVMMYINSPGGSMTAMTAIYDTMQYIKPDVQTVCLGQAASAAAILLAAGAKGKRLIL 153
Query: 131 PNARILL 137
PNAR+L+
Sbjct: 154 PNARVLI 160
>gi|63055028|gb|AAY29052.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium longum subsp. suis]
gi|63055034|gb|AAY29055.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium longum subsp. infantis ATCC 15697]
Length = 140
Score = 108 bits (271), Expect = 4e-22, Method: Composition-based stats.
Identities = 63/138 (45%), Positives = 93/138 (67%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG R+ +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRYLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+D+ +A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA D+
Sbjct: 61 QPSGGIGGTATDVRINAELIMDMKKTMSELTAEQTGHTLEEIYRDNEYDHWFTAQEALDY 120
Query: 199 GVVDKVLMSRIDIEEKSK 216
G VDK++ + I +
Sbjct: 121 GFVDKLVTTPDTIGNNQQ 138
>gi|290962145|ref|YP_003493327.1| ATP-dependent Clp protease [Streptomyces scabiei 87.22]
gi|260651671|emb|CBG74796.1| putative ATP-dependent Clp protease [Streptomyces scabiei 87.22]
Length = 165
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 73/124 (58%), Gaps = 2/124 (1%)
Query: 87 TAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GF 144
TA A+YDT +F+ + T C GQA S ++L +AG G R LP AR L+HQP+
Sbjct: 27 TAMTALYDTNRFVTCDVETVCPGQAGSAAAVLPAAGTPGKRSMLPGARALIHQPAMADPV 86
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GQA D A+++ + +R + E+ V++ G++ E + ++RD + A A +G+ D+V
Sbjct: 87 EGQAGDPAIRAEELTRHRRTMEEMLVRHTGRSPERIGADIERDTFLDAEAAVAYGLADRV 146
Query: 205 LMSR 208
+ SR
Sbjct: 147 VQSR 150
>gi|331090230|ref|ZP_08339118.1| hypothetical protein HMPREF1025_02701 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402176|gb|EGG81748.1| hypothetical protein HMPREF1025_02701 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 238
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 82/166 (49%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G+I D + +L E + + +I+++INSPGG V A IY+ +
Sbjct: 14 ERTLFLNGEISDETWYGDEVTPKLFKDELLSGEGDITVWINSPGGDVFAAAQIYNMLMDY 73
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG K P A +++H P+ G +++++ + +
Sbjct: 74 KGNVTVKIDGLAASAASVIAMAGTK--VLMSPVAMMMIHNPATIAIGDTAEMKKAIEMLD 131
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y G ++ +D + +A +A + G D++L
Sbjct: 132 EVKESIMNAYEIKTGLNRTKISHLMDAESWFNAKKAVELGFADEIL 177
>gi|326519849|dbj|BAK03849.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 228
Score = 108 bits (270), Expect = 5e-22, Method: Composition-based stats.
Identities = 54/167 (32%), Positives = 96/167 (57%), Gaps = 4/167 (2%)
Query: 11 SEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
SE+ L+P ++ T G S D+ + LL RI+F+ + +A + +QL+ L A +
Sbjct: 66 SENENPPLMPAIM--TPGG--SLDLATVLLGNRIIFIGQYVNSQVAQRVISQLVSLSAID 121
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ ++ +Y+N PGG + + +AIYD M +I P + T C G AS +++L+ GEKGMR+A+
Sbjct: 122 EEGDVLIYLNCPGGSLYSILAIYDCMSWITPKVGTVCFGVVASQAAIILAGGEKGMRYAM 181
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
PNAR+++HQP GG G ++ R + + + + + ++
Sbjct: 182 PNARVMIHQPQGGSEGNTEEVRRQVGETIYARDLTKCLLLSRDNQSI 228
>gi|76787240|ref|YP_329374.1| prophage LambdaSa04, ClpP endopeptidase [Streptococcus agalactiae
A909]
gi|76562297|gb|ABA44881.1| prophage LambdaSa04, ClpP endopeptidase (S14) family, non-peptidase
homologue, putative [Streptococcus agalactiae A909]
Length = 232
Score = 108 bits (270), Expect = 6e-22, Method: Composition-based stats.
Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 4/175 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + GQI D + QL + + +I+L+INSPGG V A IY+ + +
Sbjct: 14 RTLRIEGQIADETWFGDEVTPQLFKNDLTSETGDITLWINSPGGDVFAAAQIYNMLMDYQ 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AG P A +++H P G+A D+ + + + +
Sbjct: 74 GDVHVIIDGLAASAASVIAMAGT--TVSMSPVAMMMIHNPWTFAQGEAKDMAKVIEMLGE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
IK + Y G + ++ +D + +A +A + G DKVL + + E+
Sbjct: 132 IKESIINAYELRTGLSRTKISHLMDSESWFNAKKAVELGFADKVLFEKEETPEQD 186
>gi|57234158|ref|YP_181801.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Dehalococcoides ethenogenes 195]
gi|57224606|gb|AAW39663.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Dehalococcoides ethenogenes 195]
Length = 242
Score = 108 bits (269), Expect = 6e-22, Method: Composition-based stats.
Identities = 42/176 (23%), Positives = 79/176 (44%), Gaps = 4/176 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R +++ G+I D + QL E + I+L+INSPGG V A IY+ +
Sbjct: 20 DRTLYLDGEISDETWFGDEVTPQLFKDELSSGDGNITLWINSPGGDVFAAAQIYNMLMDY 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ AAS S++ AG K P A +++H P+ G ++++ +
Sbjct: 80 PHDVTVKIDALAASAASVIAMAGTKVCM--SPVAMMMIHNPATIAIGDTEEMQKAIDMLN 137
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
++K + Y G + ++ + +D + M+A EA G D++L +
Sbjct: 138 EVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEILFKAGEEPASD 193
>gi|298248117|ref|ZP_06971922.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
gi|297550776|gb|EFH84642.1| Endopeptidase Clp [Ktedonobacter racemifer DSM 44963]
Length = 183
Score = 108 bits (269), Expect = 7e-22, Method: Composition-based stats.
Identities = 57/147 (38%), Positives = 95/147 (64%), Gaps = 2/147 (1%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
LK+ I+ + IED +A I QL +L++E+ ++I LY+NSPGG + AG+AIYD +Q +
Sbjct: 17 LKKFILCINTAIEDSVANSIITQLFYLQSEDATRDIHLYLNSPGGNIYAGLAIYDAIQSL 76
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+P I+T+C+G+ + +LLL+AGEKG R+ALP + I L Q G A +I A++I+
Sbjct: 77 RPEIATYCLGRTSGFATLLLAAGEKGRRYALPTSTIGLTQVVAGGGPAAIEI--TAREIL 134
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDR 186
++R L ++VK ++ + + +D
Sbjct: 135 HLRRLLVNLFVKQTRQSDATIREDMDH 161
>gi|63055024|gb|AAY29050.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium dentium]
gi|63055032|gb|AAY29054.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium adolescentis]
Length = 139
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 62/129 (48%), Positives = 91/129 (70%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGLGMCASMGQFLLSSGTKGKRFLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G A+D+ +A+ I+ +K+ ++E+ + G T EE+ + + DH +A EA ++
Sbjct: 61 QPSGGIGGTATDVRINAELIMDMKKTMSELTAEQTGHTVEEIYRDNEYDHWFTAQEALEY 120
Query: 199 GVVDKVLMS 207
G VDK++ +
Sbjct: 121 GFVDKLVST 129
>gi|63055036|gb|AAY29056.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium cuniculi]
Length = 137
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 64/137 (46%), Positives = 90/137 (65%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G +D+ A+ I+ +K+ L E+ + G T EE+ + + DH +A EA D+
Sbjct: 61 QPSGGIGGTTTDVRISAELIMNMKKTLAELTAEQTGHTVEEIYRDNEYDHWFTAQEALDY 120
Query: 199 GVVDKVLMSRIDIEEKS 215
G VDK++ + + K
Sbjct: 121 GFVDKLVSTHDTMTSKE 137
>gi|261883798|ref|ZP_06007837.1| ATP-dependent Clp protease proteolytic subunit [Campylobacter
fetus subsp. venerealis str. Azul-94]
Length = 85
Score = 107 bits (267), Expect = 1e-21, Method: Composition-based stats.
Identities = 55/85 (64%), Positives = 71/85 (83%)
Query: 15 FLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+P VVE+T++GERSYDIYSRLLK+RI+ ++G+IED MA+ I AQ+LFLEAE+P K+
Sbjct: 1 MSYYIPYVVERTSKGERSYDIYSRLLKDRIIMLSGEIEDAMASAIVAQMLFLEAEDPDKD 60
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFI 99
I LYINS GGVVT+G +IYDTM +I
Sbjct: 61 IYLYINSTGGVVTSGFSIYDTMNYI 85
>gi|269469208|gb|EEZ80742.1| Protease subunit of ATP-dependent Clp protease [uncultured SUP05
cluster bacterium]
Length = 95
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 53/95 (55%), Positives = 73/95 (76%)
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
MG+LLL+AG KG RFALP+AR ++HQP GGFSGQASDI+ HA++I+K++ RLN I +
Sbjct: 1 MGALLLTAGAKGKRFALPHARCMIHQPLGGFSGQASDIDIHAKEILKVRERLNLILKNHT 60
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
G+ + ++K DRD+ MSA EA +G++DKVL R
Sbjct: 61 GQNLKTIQKDTDRDNFMSADEASQYGLIDKVLTKR 95
>gi|115349976|ref|YP_764387.1| proteolytic subunit 2 of clp protease [Stigeoclonium helveticum]
gi|98990190|gb|ABF60157.1| proteolytic subunit 2 of clp protease [Stigeoclonium helveticum]
Length = 518
Score = 107 bits (266), Expect = 2e-21, Method: Composition-based stats.
Identities = 63/188 (33%), Positives = 112/188 (59%), Gaps = 9/188 (4%)
Query: 25 QTNRGERSYDI--YSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE---ISLYI 79
Q + ++ +D+ YS+++++ +++ I + LLF+E + +E + ++I
Sbjct: 288 QDLKDQKIHDLSSYSKVMED--MYIPQNIRQKKSES--EDLLFMETQERLQEQSRVFVFI 343
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ 139
NS GG V++G+ IYD +QF+K T C+G A S S++L+ G G R+ A +++HQ
Sbjct: 344 NSTGGSVSSGITIYDALQFVKTGAVTVCLGMAFSASSMVLAGGNIGHRYVAEGAHVMIHQ 403
Query: 140 PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
P GG +GQASD+ A +I++I+R++ IY + EV K LDRD+ M+ EA D+G
Sbjct: 404 PEGGITGQASDVLLDAYEILRIRRQVATIYSLCSKRALSEVLKDLDRDNFMTPQEAVDYG 463
Query: 200 VVDKVLMS 207
+ D+++
Sbjct: 464 LADEIVTR 471
>gi|167630981|ref|YP_001681480.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
gi|167593721|gb|ABZ85469.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
Length = 237
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 81/167 (48%), Gaps = 4/167 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ER +++ G I + + +L E + +I+++INSPGG V A IY+ +
Sbjct: 13 EERTLYLNGPIAEETWWGDEVTPKLFKDELLSGSGDITVWINSPGGDVFAAAQIYNMLMD 72
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG G + P + +++H PS G + ++ R +
Sbjct: 73 YSGNVTVKIDGLAASAASVIAMAG--GDVYMSPVSMLMIHNPSTIAIGDSEEMLRAKALL 130
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y G + ++ +D + M+A +A + G DK+L
Sbjct: 131 DEVKESIINAYELKSGLSRAKLSHLMDAETWMNAKKAVELGFADKIL 177
>gi|187251362|ref|YP_001875844.1| Clp protease [Elusimicrobium minutum Pei191]
gi|186971522|gb|ACC98507.1| Clp protease [Elusimicrobium minutum Pei191]
Length = 355
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 9/177 (5%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFL-EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
R +++T I AT I AQ+ + E + I +Y+N GG TA I D M
Sbjct: 3 REIYITADISKETATDIVAQIKAMSEGIGANQPIKMYVNCFGGSATAMFTILDAMATCPC 62
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS---DIERHAQDI 158
I T +G+A S +L+ SAG K RF N+R+++H+ A IE ++
Sbjct: 63 EIITVNLGEADSAAALIFSAGSK--RFITENSRVMIHEVRLSTLYSAEPLSQIEAELKEF 120
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTL-DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + + KN GK EE++ + +D +SA EA ++G+ D +L + +I+EK
Sbjct: 121 QILNDNMFKALAKNTGKKPEEIKADVFGKDLYLSAEEAIEYGLADAILTT--EIKEK 175
>gi|289609764|emb|CBI60390.1| unnamed protein product [Sordaria macrospora]
Length = 187
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 54/102 (52%), Positives = 72/102 (70%)
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
MGS LL+AGE GMR AL NARI++HQPSGG G ASDI+ A++I +IK R+N +YVK
Sbjct: 1 MGSFLLAAGEPGMRVALTNARIMIHQPSGGAQGMASDIQIQAKEIQRIKDRMNALYVKYT 60
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
GK EE+E+ +DRD + A EA +G+VD+V R E++
Sbjct: 61 GKPLEEIERAMDRDTFLEAEEAKAFGLVDQVFDKRPGAPEEA 102
>gi|63055026|gb|AAY29051.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium animalis subsp. animalis ATCC 25527]
Length = 138
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/138 (44%), Positives = 91/138 (65%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVTTVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G +D+ +A+ I+ +K+ L E+ + G T EE+ + + DH +A EA ++
Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKKTLGELTAEQTGHTIEEIYRDNEYDHWFTAEEALEY 120
Query: 199 GVVDKVLMSRIDIEEKSK 216
G VDK++ + + +
Sbjct: 121 GFVDKLVSTHETMNSDKE 138
>gi|63055038|gb|AAY29057.1| predicted ATP-dependent Clp protease proteolytic subunit 1
[Bifidobacterium animalis subsp. lactis DSM 10140]
Length = 138
Score = 106 bits (264), Expect = 2e-21, Method: Composition-based stats.
Identities = 62/138 (44%), Positives = 91/138 (65%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG +TAGMAIYDTMQ I+P ++T +G ASMG LLS+G KG RF +AR+L+H
Sbjct: 1 INSPGGSITAGMAIYDTMQLIEPDVATVGIGMCASMGQFLLSSGTKGKRFLTSHARVLMH 60
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
QPSGG G +D+ +A+ I+ +K+ L E+ + G T EE+ + + DH +A EA ++
Sbjct: 61 QPSGGIGGTTTDVRINAELIMDMKKTLGELTAEQTGHTIEEIYRDNEYDHWFTAEEALEY 120
Query: 199 GVVDKVLMSRIDIEEKSK 216
G VDK++ + + +
Sbjct: 121 GFVDKLVSTHETMNSDKE 138
>gi|317501080|ref|ZP_07959286.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
gi|316897467|gb|EFV19532.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 8_1_57FAA]
Length = 242
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 41/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R +++ G+I D + +L E I+L+INSPGG V A IY+ +
Sbjct: 20 DRTLYLDGEISDETWFGDEVTPKLFSDELHAGDGNITLWINSPGGDVFAAAQIYNMLMDY 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ AAS S++ AG K P A +++H P+ G ++++ +
Sbjct: 80 PHDVTVKIDALAASAASVIAMAGTKVCM--SPVAMMMVHNPATIAIGDTEEMQKAIDMLN 137
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
++K + Y G + ++ + +D + M+A EA G D++L +
Sbjct: 138 EVKESIMNAYEIKSGLSRHKISQLMDAETWMNAKEAVKLGFADEILFRDGE 188
>gi|238695592|ref|YP_002922619.1| P05 [Xanthomonas phage phiL7]
gi|190343959|gb|ACE75745.1| P05 [Xanthomonas phage phiL7]
Length = 245
Score = 105 bits (263), Expect = 3e-21, Method: Composition-based stats.
Identities = 47/184 (25%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM 90
R+ DI+ + ++ + G+ + +Q+L + ++++ I+SPGG + AG+
Sbjct: 41 RAIDIFGEIGED----LYGE---GTTSAQISQMLR---DMGPGDVTVNIDSPGGDMFAGL 90
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
AIY+ ++ ++ +G AAS S++ AG+ P A I++HQ +G + D
Sbjct: 91 AIYNQLRAHDGVVTVNVVGTAASAASVIAMAGDVVNMH--PAAFIMIHQTWLLAAGNSRD 148
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
A+ + + + EIY GK EVE+ + + +A EA +G+ DKVL
Sbjct: 149 FIALAEMLAPFDKAMAEIYASRTGKPLAEVEQLMAEETWFNAEEAVAYGLADKVLDPEAS 208
Query: 211 IEEK 214
++
Sbjct: 209 KNKR 212
>gi|317132778|ref|YP_004092092.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3]
gi|315470757|gb|ADU27361.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3]
Length = 248
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R +++ G+I D + Q+ E + + I+L+INSPGG V A IY+ +
Sbjct: 20 DRTLYLDGEISDETWYGDEVTPQVFKDELNSGKGNITLWINSPGGDVFAAAQIYNMLMDY 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ AAS S++ AG K P A +++H P+ G + ++++ +
Sbjct: 80 PYDVTVKIDALAASAASVIAMAGTKVCM--SPVAMLMVHNPATIAIGDSEEMQKAIDMLS 137
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y G + ++ K +D + M+A EA G D++L
Sbjct: 138 EVKESIMNAYEIKSGLSRNKISKLMDAETWMNAKEAKKLGFADEIL 183
>gi|331085734|ref|ZP_08334817.1| hypothetical protein HMPREF0987_01120 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330406657|gb|EGG86162.1| hypothetical protein HMPREF0987_01120 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 235
Score = 105 bits (262), Expect = 4e-21, Method: Composition-based stats.
Identities = 42/170 (24%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ R +F+ G+I D + ++ E ++ + +I+++INSPGG V A IY+ +
Sbjct: 15 ESRTLFLNGEISDETWYGDEVTPKMFKEELQDGEGDITVWINSPGGDVFAAAQIYNMLMD 74
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG + P A +++H P+ G +S++++ +
Sbjct: 75 YKGNVTVKIDGLAASAASVIAMAGTEVQM--SPVAMMMIHNPATIAIGDSSEMKKAIDML 132
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
++K + Y G + + +D + +A +A + G DK+L S+
Sbjct: 133 DEVKESIMNAYEIKTGLSRSRISHLMDAESWFNAKKAVELGFADKLLFSK 182
>gi|194033275|ref|YP_002000447.1| ATP-dependent Clp protease proteolytic subunit [Oedogonium
cardiacum]
gi|156618980|gb|ABU88167.1| clp protease proteolytic subunit 2 [Oedogonium cardiacum]
gi|186968892|gb|ACC97215.1| proteolytic subunit 2 of clp protease [Oedogonium cardiacum]
Length = 560
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/141 (36%), Positives = 85/141 (60%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E QK + ++INS GG V +G+ +YD +QF+K T C+G A S SL+L+ G G
Sbjct: 373 ERMQEQKRVFVFINSTGGSVHSGITVYDALQFVKAGTVTVCLGTAFSASSLVLAGGNIGH 432
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ +++HQP GG GQASD+ ++++++R+ IY +++ E+ K LDR
Sbjct: 433 RYVSEGGHVMIHQPEGGIQGQASDVVVDTHELMRVRRQAATIYALCSKRSFHEILKDLDR 492
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D+ M+ EA D+G+ D+++
Sbjct: 493 DYFMTPQEAIDYGLADEIVTR 513
Score = 35.0 bits (79), Expect = 6.6, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 25/44 (56%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ D+Y + + R++FV +++ + I ++++ E+ +KE
Sbjct: 19 QWIDLYHLIFRRRLIFVMSELDQELCNQIAGMMIYIHFEDKRKE 62
>gi|304322945|ref|YP_003795510.1| proteolytic subunit 2 of clp protease [Floydiella terrestris]
gi|270048144|gb|ACZ58439.1| proteolytic subunit 2 of clp protease [Floydiella terrestris]
Length = 502
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 53/141 (37%), Positives = 89/141 (63%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E + Q+ + ++INS GG +T+G+ IYD +QF+K T C+G A S S++L+ G G
Sbjct: 317 ERMSDQRRVFVFINSTGGSITSGITIYDALQFVKAGAVTVCLGMAFSASSMVLAGGNIGH 376
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
R+ + +++HQP GG GQASD+ A +I++++R+ IY + + + EV K LDR
Sbjct: 377 RYVSEGSHVMMHQPEGGIKGQASDVLLDAHEILRVRRQAATIYTLSSKRAFHEVLKDLDR 436
Query: 187 DHIMSASEACDWGVVDKVLMS 207
D+ M+ EA D+G+ D+++
Sbjct: 437 DYFMTPQEAIDYGLADEIVTR 457
Score = 35.0 bits (79), Expect = 7.5, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 26/44 (59%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKE 74
+ D+Y+ + + R+VFV +++ + I ++++ E+ +KE
Sbjct: 19 QWIDLYNLIFRRRLVFVMAELDQDLCNQIAGMMVYIHFEDKRKE 62
>gi|77411264|ref|ZP_00787614.1| ClpP protease family protein [Streptococcus agalactiae CJB111]
gi|77162690|gb|EAO73651.1| ClpP protease family protein [Streptococcus agalactiae CJB111]
Length = 232
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 45/175 (25%), Positives = 80/175 (45%), Gaps = 4/175 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + GQI D + Q + + +I+L+INSPGG V A IY+ + +
Sbjct: 14 RTLRIEGQIADETWFGDEVTPQQFKNDLISGTGDITLWINSPGGDVFAAAQIYNMLMDYQ 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AG P A +++H P G+A D+ + + + +
Sbjct: 74 GDVHVIIDGLAASAASVIAMAGT--TVSMSPVAMMMIHNPWTFAQGEAKDMAKVIEMLGE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
IK + Y G + ++ +D + +A +A + G DKVL + + E+
Sbjct: 132 IKESIINAYELRTGLSRTKISHLMDSESWFNAKKAVELGFADKVLFEKEETPEQD 186
>gi|326491715|dbj|BAJ94335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 105 bits (261), Expect = 5e-21, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 61/80 (76%)
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
LPNAR+++HQPSGG GQA+DI A++I+K++ RLN+IY K+ G+ +++E+ ++RD
Sbjct: 35 LPNARVMIHQPSGGAQGQATDIAIQAKEILKLRDRLNKIYAKHTGQNIDKIEQCMERDLF 94
Query: 190 MSASEACDWGVVDKVLMSRI 209
M EA +WG++D+V+ +R
Sbjct: 95 MDPEEAREWGLIDEVIENRP 114
>gi|213622512|ref|ZP_03375295.1| ATP-dependent Clp protease proteolytic subunit [Salmonella enterica
subsp. enterica serovar Typhi str. E98-2068]
Length = 95
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 72/95 (75%), Positives = 86/95 (90%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
KER++F+TGQ+EDHMA LI AQ+LFLEAENP+K+I LYINSPGGV+TAGM+IYDTMQFIK
Sbjct: 1 KERVIFLTGQVEDHMANLIVAQMLFLEAENPEKDIYLYINSPGGVITAGMSIYDTMQFIK 60
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
P +ST CMGQAASMG+ LL+AG KG RF LPN+R+
Sbjct: 61 PDVSTICMGQAASMGAFLLTAGAKGKRFCLPNSRV 95
>gi|153814261|ref|ZP_01966929.1| hypothetical protein RUMTOR_00470 [Ruminococcus torques ATCC 27756]
gi|145848657|gb|EDK25575.1| hypothetical protein RUMTOR_00470 [Ruminococcus torques ATCC 27756]
Length = 268
Score = 105 bits (261), Expect = 6e-21, Method: Composition-based stats.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
ER +F+ G I D + QL E I+++INSPGG V A IY+ ++
Sbjct: 19 MERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRD 78
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG+ P A +++H P+ G+A D+++ +
Sbjct: 79 YKGSVTVKIDGIAASAASVIAMAGDTVCV--SPVAMMMIHNPATMAMGEAKDMQKAIAML 136
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++K + Y G T + +D + +A +A + G DK+L + E+K K
Sbjct: 137 NEVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKILFDSDEDEKKKK 194
>gi|209397642|ref|YP_002271427.1| putative phage portal protein, lambda family [Escherichia coli
O157:H7 str. EC4115]
gi|209159042|gb|ACI36475.1| putative phage portal protein, lambda family [Escherichia coli
O157:H7 str. EC4115]
Length = 1156
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 516 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 572
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 573 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 630
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 631 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 672
>gi|311279176|ref|YP_003941407.1| peptidase S14 ClpP [Enterobacter cloacae SCF1]
gi|308748371|gb|ADO48123.1| peptidase S14 ClpP [Enterobacter cloacae SCF1]
Length = 669
Score = 103 bits (257), Expect = 2e-20, Method: Composition-based stats.
Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGYWGVTARQFVNDLKAL---GDVTHINLHINSPGGDVFDGIAIFNALKHHGAA 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ G AASM S++ G N +++H+P G G A+D+ +A + K++
Sbjct: 91 ITVHIDGLAASMASVIAMVGNP--VIMPENTMMMIHKPWGFAGGDANDMRDYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y GK+ E++ L+ + M +E G D+V
Sbjct: 149 SVLIPAYADKTGKSTEDIAAMLEDETWMDGAECLALGFADQV 190
>gi|282599814|ref|ZP_05971986.2| gifsy-2 prophage resembles Clp protease [Providencia rustigianii
DSM 4541]
gi|282567947|gb|EFB73482.1| gifsy-2 prophage resembles Clp protease [Providencia rustigianii
DSM 4541]
Length = 683
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 46/164 (28%), Positives = 84/164 (51%), Gaps = 7/164 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A L+ L + I+L+I+SPGG V G+AIY+ ++
Sbjct: 42 IYIYDEIGGWGISARRFTEDLIALGNLSH---INLHIHSPGGEVFEGIAIYNQLKNHNAS 98
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G++ NA +++H+P G G A D+ +A + K++
Sbjct: 99 ITVYIDGLAASMASVIAMVGDE--VIMPTNAMMMIHKPWGVSWGDADDMRDYADLLDKVE 156
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
L Y++ GKT EE+E L + ++A E + G + ++
Sbjct: 157 NVLIPAYMEKTGKTKEELEAMLSEETWLTAEECVEHGFANTIIE 200
>gi|212913328|gb|ACJ38659.1| caseinolytic ATP-dependent protease [Shuteria involucrata var.
vestita]
Length = 159
Score = 103 bits (256), Expect = 2e-20, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 89/150 (59%), Gaps = 1/150 (0%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y+RL ++R++F+ +++ ++ I + FL E+P +++ L+IN PGG V +G+A
Sbjct: 8 WVDLYNRLYRQRLLFLGKELDAELSNQITGLMAFLSIEDPSEDLFLFINCPGGGVMSGIA 67
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD- 150
+YD M + + T CM AASMGS +L GE R A P+ARI++HQP+ F D
Sbjct: 68 VYDMMHHVDADVQTVCMALAASMGSFILLGGEITERLAFPHARIMIHQPASSFYKGHMDA 127
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+ +I++I+ + Y++ GK+ +
Sbjct: 128 VFMEFGEILRIRESIIRTYMQRTGKSXWII 157
>gi|326338736|gb|EGD62556.1| Prophage Clp protease-like protein [Escherichia coli O157:H7 str.
1125]
Length = 651
Score = 102 bits (255), Expect = 2e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|187776052|ref|ZP_02800048.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4196]
gi|188024966|ref|ZP_02775094.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4113]
gi|188025119|ref|ZP_02776143.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4113]
gi|189010681|ref|ZP_02808648.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|189010697|ref|ZP_02808743.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|189010786|ref|ZP_02809320.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|189402280|ref|ZP_02781420.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4401]
gi|189403387|ref|ZP_02795136.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4486]
gi|189404338|ref|ZP_02788626.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4501]
gi|208809546|ref|ZP_03251883.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208810843|ref|ZP_03252676.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208814387|ref|ZP_03255716.1| clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208815618|ref|ZP_03256797.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208820967|ref|ZP_03261287.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|208821734|ref|ZP_03262054.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209399975|ref|YP_002270289.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|209400945|ref|YP_002271488.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|217329311|ref|ZP_03445391.1| Clp protease domain protein [Escherichia coli O157:H7 str. TW14588]
gi|254792824|ref|YP_003077661.1| protease [Escherichia coli O157:H7 str. TW14359]
gi|291282476|ref|YP_003499294.1| Peptidase S14, ClpP [Escherichia coli O55:H7 str. CB9615]
gi|187769280|gb|EDU33124.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4196]
gi|188014762|gb|EDU52884.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4113]
gi|188015660|gb|EDU53782.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4113]
gi|188998504|gb|EDU67496.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|188998975|gb|EDU67961.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|188999003|gb|EDU67989.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4076]
gi|189356456|gb|EDU74875.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4401]
gi|189360987|gb|EDU79406.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4486]
gi|189366267|gb|EDU84683.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC4501]
gi|208724349|gb|EDZ74057.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208729347|gb|EDZ78948.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208732266|gb|EDZ80954.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208735664|gb|EDZ84351.1| clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208741090|gb|EDZ88772.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|208741857|gb|EDZ89539.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209161375|gb|ACI38808.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|209162345|gb|ACI39778.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|217317750|gb|EEC26178.1| Clp protease domain protein [Escherichia coli O157:H7 str. TW14588]
gi|254592224|gb|ACT71585.1| protease [Escherichia coli O157:H7 str. TW14359]
gi|290762349|gb|ADD56310.1| Peptidase S14, ClpP [Escherichia coli O55:H7 str. CB9615]
gi|320192299|gb|EFW66944.1| Prophage Clp protease-like protein [Escherichia coli O157:H7 str.
EC1212]
gi|323181151|gb|EFZ66681.1| clp protease family protein [Escherichia coli 1180]
gi|323181169|gb|EFZ66698.1| clp protease family protein [Escherichia coli 1180]
Length = 651
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|324999707|ref|ZP_08120819.1| ATP-dependent Clp protease proteolytic subunit [Pseudonocardia sp.
P1]
Length = 185
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 52/194 (26%), Positives = 96/194 (49%), Gaps = 19/194 (9%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI 75
+ ++P + D+ RLL ERIV ++ +++D +A C +LL L AE+P++++
Sbjct: 1 MPVLPT----------TSDLADRLLGERIVLLSRELDDDVAAETCGRLLLLAAEDPRRDV 50
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARI 135
+L + SPGG A A++DT++ + + T G A L++AG G RFALP+A
Sbjct: 51 TLQVLSPGGSPVAAAAVHDTIRALGVDVVTVANGSLAGPAPFLVAAGTPGKRFALPHASF 110
Query: 136 LLHQPSGGFSGQAS-----DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+ P D+ A + + + ++ + + CG + + R+ +
Sbjct: 111 RIPDPEDTGQAPVRGAHPGDVRVRADHLARRRAEIDALTERYCGGS---LPGD-ARERWL 166
Query: 191 SASEACDWGVVDKV 204
+A +A G+VD V
Sbjct: 167 TAGDAAAAGLVDHV 180
>gi|195937913|ref|ZP_03083295.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
EC4024]
gi|195939168|ref|ZP_03084550.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
EC4024]
gi|260867687|ref|YP_003234089.1| putative protease/scaffold protein [Escherichia coli O111:H- str.
11128]
gi|260869329|ref|YP_003235731.1| putative protease/scaffold protein [Escherichia coli O111:H- str.
11128]
gi|257764043|dbj|BAI35538.1| putative protease/scaffold protein [Escherichia coli O111:H- str.
11128]
gi|257765685|dbj|BAI37180.1| putative protease/scaffold protein [Escherichia coli O111:H- str.
11128]
gi|320637096|gb|EFX06943.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
G5101]
gi|320653428|gb|EFX21548.1| putative protease/scaffold protein [Escherichia coli O55:H7 str.
3256-97 TW 07815]
Length = 674
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|15832214|ref|NP_310987.1| protease/scaffold protein [Escherichia coli O157:H7 str. Sakai]
gi|13362429|dbj|BAB36383.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
Sakai]
Length = 368
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 83 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 139
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 140 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 197
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 198 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 239
>gi|163790237|ref|ZP_02184670.1| hypothetical protein CAT7_04934 [Carnobacterium sp. AT7]
gi|159874512|gb|EDP68583.1| hypothetical protein CAT7_04934 [Carnobacterium sp. AT7]
Length = 246
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 89/182 (48%), Gaps = 11/182 (6%)
Query: 40 LKE--RIVFVTGQI-----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
LK+ I+ ++G I +D + I A+L+ + +I +Y+NS GG V G+ I
Sbjct: 15 LKDGKHILTLSGTIRQRYWDDDKS--IDAKLVSDSLDGVTDDIVIYLNSTGGDVFQGIEI 72
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
Y+ ++ I+ G AAS + +++ ++ + ++H+ S G +D++
Sbjct: 73 YNYLKNHSSHITVEVTGTAASAATFIVAGADEAIMNTG--TSFMIHEASSFAWGNKADLK 130
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ + I + IY + G++ E++ ++ + +A EA +G +KV ++ DI
Sbjct: 131 KTLNALETIDESIIAIYTEKTGQSNEQLNDWMEEEKWFTAEEAVKYGFANKVKENKKDIT 190
Query: 213 EK 214
++
Sbjct: 191 DQ 192
>gi|261254705|ref|ZP_05947238.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
FRIK966]
Length = 674
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|293433601|ref|ZP_06662029.1| prophage Clp protease-like protein [Escherichia coli B088]
gi|291324420|gb|EFE63842.1| prophage Clp protease-like protein [Escherichia coli B088]
Length = 686
Score = 102 bits (255), Expect = 3e-20, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A L L I+L+INSPGG V G+AI++ ++
Sbjct: 46 IYIYDEIGFWGVTAKQFVCDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 102
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + KI+
Sbjct: 103 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSEGDAEDMRSYADLLDKIE 160
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 161 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 202
>gi|322835204|ref|YP_004215230.1| peptidase S14 ClpP [Rahnella sp. Y9602]
gi|321170405|gb|ADW76103.1| peptidase S14 ClpP [Rahnella sp. Y9602]
Length = 676
Score = 102 bits (254), Expect = 3e-20, Method: Composition-based stats.
Identities = 45/162 (27%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L + I+L+I+SPGG V G+AIY+ +
Sbjct: 35 IYIYDEIGYWGVTARQFTSSMKALGDLDH---INLHIHSPGGDVFDGIAIYNLLNSHTAS 91
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ G NA +++H+P G G A+D+ +A + K++
Sbjct: 92 KTVYIDGLAASMASVIAMVGNP--IIMPENAMMMIHKPWGITGGDANDMRDYADLLDKVE 149
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y K GKT +E+ L + M+A E + G D++
Sbjct: 150 AVLIPSYAKKTGKTPDELALMLGEETWMTAQECLEHGFADQI 191
>gi|260843585|ref|YP_003221363.1| putative protease/scaffold protein [Escherichia coli O103:H2 str.
12009]
gi|257758732|dbj|BAI30229.1| putative protease/scaffold protein [Escherichia coli O103:H2 str.
12009]
gi|320642456|gb|EFX11729.1| putative protease/scaffold protein [Escherichia coli O157:H- str.
493-89]
gi|320659090|gb|EFX26697.1| putative protease/scaffold protein [Escherichia coli O55:H7 str.
USDA 5905]
Length = 674
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|325499899|gb|EGC97758.1| ATP-dependent protease [Escherichia fergusonii ECD227]
Length = 652
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ HA + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTHADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|300853555|ref|YP_003778539.1| phage related protease [Clostridium ljungdahlii DSM 13528]
gi|300433670|gb|ADK13437.1| phage related protease [Clostridium ljungdahlii DSM 13528]
Length = 279
Score = 102 bits (254), Expect = 4e-20, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 6/167 (3%)
Query: 47 VTGQIEDHM--ATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ G I D I + L++ K +++YINS GG V AG AIY ++
Sbjct: 23 LYGDISDSTWWGDEITPKNFKEELDSLGDIKTLNVYINSGGGDVFAGQAIYSMLKRHSAT 82
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++ + G AAS+ S++ AG+ NA +++H P G A D + A D+ K++
Sbjct: 83 VNVYVDGLAASIASIIAMAGD--SVKMPKNAMLMVHNPWSYAMGNAKDFRKLADDLDKVR 140
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ +Y G E + + LD + M+A EA ++G D++ +
Sbjct: 141 ESMISVYEDKTGMEKESIVELLDAETWMTAEEAVEFGFADEIEEEKQ 187
>gi|189405378|ref|ZP_02815041.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC869]
gi|189406139|ref|ZP_02826588.2| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC508]
gi|193066454|ref|ZP_03047500.1| peptidase S14, ClpP [Escherichia coli E22]
gi|189370416|gb|EDU88832.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC869]
gi|189376270|gb|EDU94686.1| peptidase S14, ClpP [Escherichia coli O157:H7 str. EC508]
gi|192925925|gb|EDV80573.1| peptidase S14, ClpP [Escherichia coli E22]
Length = 651
Score = 102 bits (253), Expect = 4e-20, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|293394114|ref|ZP_06638415.1| gifsy-2 prophage resembles Clp protease [Serratia odorifera DSM
4582]
gi|291423374|gb|EFE96602.1| gifsy-2 prophage resembles Clp protease [Serratia odorifera DSM
4582]
Length = 650
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A L L +I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGYWGITAKQFVKDLQAL---GDITQINLHINSPGGDVFDGIAIFNALKNHGAA 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ G AASM S++ G N +++H+P G G A+D+ +A + K++
Sbjct: 68 ITVHIDGLAASMASVIAMVGNP--VIMPENTMMMIHKPWGFAGGDANDMRNYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L YV GK+ +EV LD + M E G D+V
Sbjct: 126 NVLIPAYVAKTGKSADEVAAMLDDETWMDGKECLALGFADQV 167
>gi|320172939|gb|EFW48168.1| ATP-dependent Clp protease proteolytic subunit [Shigella
dysenteriae CDC 74-1112]
gi|332098988|gb|EGJ03935.1| clp protease family protein [Shigella dysenteriae 155-74]
Length = 652
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGTP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|221127124|ref|XP_002165386.1| PREDICTED: similar to Putative ATP-dependent Clp protease
proteolytic subunit, mitochondrial [Hydra
magnipapillata]
Length = 95
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 40/66 (60%), Positives = 56/66 (84%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISL 77
VP+VVEQ+ R ER+YDIYSRLLKERIV + G I+D++++++ AQLLFL++E+ +K I +
Sbjct: 29 YVPIVVEQSGRTERAYDIYSRLLKERIVCLFGGIDDNVSSVVVAQLLFLQSESRKKPIHM 88
Query: 78 YINSPG 83
YINSPG
Sbjct: 89 YINSPG 94
>gi|11875099|dbj|BAB19578.1| scaffolding protein [Enterobacteria phage VT1-Sakai]
gi|326343885|gb|EGD67646.1| Prophage Clp protease-like protein [Escherichia coli O157:H7 str.
1044]
Length = 296
Score = 102 bits (253), Expect = 5e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|15802431|ref|NP_288457.1| putative peptidase encoded within prophage CP-933U [Escherichia
coli O157:H7 EDL933]
gi|12516112|gb|AAG57011.1|AE005420_16 putative peptidase encoded within prophage CP-933U [Escherichia
coli O157:H7 str. EDL933]
Length = 319
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A ++L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFVSELNAL---GDITHINLHINSPGGDVFEGIAIFNALKNQGAT 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ AG+ NA +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIHKPWGFSGGDAEDMRSYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 SVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|331090181|ref|ZP_08339069.1| hypothetical protein HMPREF1025_02652 [Lachnospiraceae bacterium
3_1_46FAA]
gi|330402127|gb|EGG81699.1| hypothetical protein HMPREF1025_02652 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 229
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
ER +F+ G I + I QL E +I+++INSPGG A IY+ +
Sbjct: 1 MERTLFLNGTIAEESWFDDDITPQLFKEELMAGSGDITVWINSPGGDCVAAAQIYNMLMD 60
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG K P + +++H P G +++++ + +
Sbjct: 61 YKGNVTVKIDGIAASAASVIAMAGTK--VLVSPVSMMMIHNPMTVAMGDTAEMQKAIEML 118
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+K + Y G + + +D + M A +A + G D+VL R ++ E +
Sbjct: 119 GSVKDSIINAYEIKTGLSRTRLSHLMDAETWMDAGKAVELGFADEVL-KRSEVPEDME 175
>gi|167856520|ref|ZP_02479231.1| putative Clp-like protease [Haemophilus parasuis 29755]
gi|167852352|gb|EDS23655.1| putative Clp-like protease [Haemophilus parasuis 29755]
Length = 655
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I L+I+SPGG V G+AIY+ ++ + + G AASM S++ G+
Sbjct: 36 LKNLGDLKHIDLHIHSPGGSVFDGIAIYNLLKNHPASKTVYIDGLAASMASVIAMVGDP- 94
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A D+ ++A + KI+ L Y + GK+ EE+ + L
Sbjct: 95 -VIMPKNAMMMIHKPWGIQGGDAEDMRKYADLLDKIENTLIPAYAEKTGKSPEELAEMLK 153
Query: 186 RDHIMSASEACDWGVVDK 203
+ ++A E + G DK
Sbjct: 154 EETWLTAEECVEQGFADK 171
>gi|320654209|gb|EFX22272.1| putative protease encoded in prophage CP-933K [Escherichia coli
O55:H7 str. 3256-97 TW 07815]
gi|320664709|gb|EFX31852.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. LSU-61]
Length = 652
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|218551656|ref|YP_002385448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Escherichia fergusonii ATCC 35469]
gi|218359198|emb|CAQ91863.2| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia fergusonii ATCC 35469]
Length = 739
Score = 101 bits (252), Expect = 6e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 98 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 154
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 155 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 212
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 213 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 254
>gi|218694488|ref|YP_002402155.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) of prophage [Escherichia coli 55989]
gi|218351220|emb|CAU96924.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) of prophage [Escherichia coli 55989]
Length = 723
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 83 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNHGAA 139
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM SL+ AG+ NA +++H+P G G A + +A+ + K++
Sbjct: 140 ITVYVDGVAASMASLIAMAGD--TVIMPENAFMMIHKPWGISGGDAEKMRTYAERLDKLE 197
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +Y + GKT +E+ L + MS +E G D+V
Sbjct: 198 SVMVPVYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 239
>gi|294490162|gb|ADE88918.1| gifsy-2 prophage Clp protease-like protein [Escherichia coli
IHE3034]
Length = 675
Score = 101 bits (252), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|301301732|ref|ZP_07207867.1| Clp protease [Escherichia coli MS 124-1]
gi|300843229|gb|EFK70989.1| Clp protease [Escherichia coli MS 124-1]
Length = 652
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|320195896|gb|EFW70521.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
WV_060327]
Length = 652
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|222033305|emb|CAP76045.1| ATP-dependent Clp protease proteolyticsubunit( end opeptidase Clp)
[Escherichia coli LF82]
Length = 707
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 66 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 122
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 123 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 180
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 181 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 222
>gi|218703100|ref|YP_002410729.1| putative ATP-dependent Clp protease proteolytic subunit
[Escherichia coli IAI39]
gi|218373086|emb|CAR20978.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli IAI39]
Length = 707
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 66 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 122
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 123 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 180
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 181 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 222
>gi|194426733|ref|ZP_03059286.1| ATP-dependent protease [Escherichia coli B171]
gi|194429906|ref|ZP_03062417.1| ATP-dependent protease [Escherichia coli B171]
gi|194412062|gb|EDX28373.1| ATP-dependent protease [Escherichia coli B171]
gi|194415069|gb|EDX31338.1| ATP-dependent protease [Escherichia coli B171]
Length = 652
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|218695107|ref|YP_002402774.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli 55989]
gi|218351839|emb|CAU97558.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli 55989]
Length = 739
Score = 101 bits (251), Expect = 7e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 98 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 154
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 155 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 212
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 213 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 254
>gi|312946146|gb|ADR26973.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli O83:H1 str. NRG
857C]
gi|315614576|gb|EFU95219.1| clp protease family protein [Escherichia coli 3431]
Length = 652
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|91214065|ref|YP_544051.1| putative protease/scaffold protein [Escherichia coli UTI89]
gi|91075639|gb|ABE10520.1| putative protease/scaffold protein [Escherichia coli UTI89]
Length = 707
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 66 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 122
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 123 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 180
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 181 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 222
>gi|324112021|gb|EGC05999.1| Clp protease [Escherichia fergusonii B253]
Length = 652
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|323190376|gb|EFZ75652.1| clp protease family protein [Escherichia coli RN587/1]
Length = 652
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|149192589|ref|ZP_01870749.1| ATP-dependent Clp protease proteolytic subunit [Vibrio shilonii
AK1]
gi|148833577|gb|EDL50654.1| ATP-dependent Clp protease proteolytic subunit [Vibrio shilonii
AK1]
Length = 69
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 48/71 (67%), Positives = 58/71 (81%), Gaps = 2/71 (2%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLIC 60
MS++ K + LVPMVVEQT+RGERSYDIYSRLLKERI+F+TGQ+ED+MA LI
Sbjct: 1 MSYQ--EKNAMSPIMNALVPMVVEQTSRGERSYDIYSRLLKERIIFLTGQVEDNMANLIV 58
Query: 61 AQLLFLEAENP 71
AQ+LFLE+ENP
Sbjct: 59 AQMLFLESENP 69
>gi|191173169|ref|ZP_03034701.1| ATP-dependent protease [Escherichia coli F11]
gi|300992761|ref|ZP_07180038.1| Clp protease [Escherichia coli MS 200-1]
gi|190906554|gb|EDV66161.1| ATP-dependent protease [Escherichia coli F11]
gi|300305257|gb|EFJ59777.1| Clp protease [Escherichia coli MS 200-1]
gi|324010861|gb|EGB80080.1| Clp protease [Escherichia coli MS 60-1]
Length = 652
Score = 101 bits (251), Expect = 8e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|323161352|gb|EFZ47259.1| clp protease family protein [Escherichia coli E128010]
Length = 652
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|51773721|emb|CAC83157.2| putative protease/scaffold protein [Enterobacteria phage CP-1639]
Length = 706
Score = 101 bits (251), Expect = 9e-20, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 66 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNHGAA 122
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM SL+ AG+ NA +++H+P G G A + +A+ + K++
Sbjct: 123 ITVYVDGVAASMASLIAMAGD--TVIMPENAFMMIHKPWGISGGDAEKMRTYAERLDKLE 180
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +Y + GKT +E+ L + MS +E G D+V
Sbjct: 181 SVMVPVYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 222
>gi|331652921|ref|ZP_08353926.1| putative protease/scaffold protein [Escherichia coli M718]
gi|331049019|gb|EGI21091.1| putative protease/scaffold protein [Escherichia coli M718]
Length = 639
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 84 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 140
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 141 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 198
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 199 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 240
>gi|324117952|gb|EGC11851.1| Clp protease [Escherichia coli E1167]
Length = 652
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|32128420|ref|NP_858955.1| protease of the ClpP family [Xanthomonas phage Xp10]
gi|31788483|gb|AAP58675.1| 8R [Xanthomonas phage Xp10]
Length = 245
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 2/154 (1%)
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
A + E +I++ I+SPGG + AG+AIY+ + K ++ +G+AAS S++
Sbjct: 61 AHIASFLNEIGPGDITVNIDSPGGDMFAGLAIYNLLLAHKGRVTVNVIGRAASAASVIAM 120
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG++ P+A I++H G + ++ ++ + + +IYV G + + +
Sbjct: 121 AGDQINMH--PSAFIMIHNCHLVVGGNSKELAEVSEMMKPFDSAMADIYVARTGMSKDTI 178
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ +D + MSA E+ G D ++ + K
Sbjct: 179 VQMMDAETWMSAEESVKLGFADSIVTPVGEQPTK 212
>gi|262174040|ref|ZP_06041716.1| prophage Clp protease-like protein [Vibrio mimicus MB-451]
gi|261890220|gb|EEY36208.1| prophage Clp protease-like protein [Vibrio mimicus MB-451]
Length = 677
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 7/164 (4%)
Query: 45 VFVTGQIEDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I I A+ L++ + I L I+SPGG V GM IY+ +
Sbjct: 26 IYIYDEIGGW---GITARQFANDLKSRGDVRNIVLRIHSPGGDVFEGMVIYNLLNQHPAY 82
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ + NA I++H+P G G A D+ R+A + +++
Sbjct: 83 ITVYIDGLAASMASVIAMVGD--VVIIPMNAAIMIHKPWGIQGGDADDMRRYADLLDQVE 140
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
L Y K GKT EE+++ LD + M EA + G D V
Sbjct: 141 DSLVSAYTKKTGKTVEEIKQLLDAETWMFGQEAVELGFADMVAE 184
>gi|194430149|ref|ZP_03062651.1| peptidase S14, ClpP [Escherichia coli B171]
gi|194411813|gb|EDX28133.1| peptidase S14, ClpP [Escherichia coli B171]
gi|323159483|gb|EFZ45464.1| clp protease family protein [Escherichia coli E128010]
Length = 651
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNHGAA 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM SL+ AG+ NA +++H+P G G A + +A+ + K++
Sbjct: 68 ITVYVDGVAASMASLIAMAGD--TVIMPENAFMMIHKPWGISGGDAEKMRTYAERLDKLE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVMVPVYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|218133443|ref|ZP_03462247.1| hypothetical protein BACPEC_01308 [Bacteroides pectinophilus ATCC
43243]
gi|217990818|gb|EEC56824.1| hypothetical protein BACPEC_01308 [Bacteroides pectinophilus ATCC
43243]
Length = 271
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/174 (26%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
ER +F+ G I D + QL E I+++INSPGG V A IY+ ++
Sbjct: 19 MERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRD 78
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG+ P A +++H P+ G+ D+++ +
Sbjct: 79 YKGSVTVKIDGIAASAASVIAMAGDTVCV--SPVAMMMIHNPATMAMGETRDMQKAIAML 136
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++K + Y G T + +D + +A +A + G DK+L S + +
Sbjct: 137 NEVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKILFSSGETD 190
>gi|327253812|gb|EGE65441.1| clp protease family protein [Escherichia coli STEC_7v]
Length = 651
Score = 100 bits (250), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + + L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFVSDMNAL---GDITHINLHINSPGGDVFEGIAIFNALKNHGAA 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM SL+ AG+ NA +++H+P G G A + +A+ + K++
Sbjct: 68 ITVYVDGVAASMASLIAMAGD--TVIMPENAFMMIHKPWGISGGDAEKMRTYAERLDKLE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 SVMVPVYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|320179471|gb|EFW54427.1| Prophage Clp protease-like protein [Shigella boydii ATCC 9905]
Length = 663
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGTP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +EV L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEVAAMLADETWMSGAECLAHGFADQV 167
>gi|313896403|ref|ZP_07829954.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974827|gb|EFR40291.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
Length = 231
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 4/167 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++RI+ + G+I D + Q E + +I L+INSPGG A IY+ +
Sbjct: 14 EKRILLLDGEISDETWWGDEVTPQTFRSELNAAEGDIDLWINSPGGDCYAAAQIYNMLME 73
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG P A I++H P G ++ER +
Sbjct: 74 YKGNVNVKIDGIAASAASVVAMAGTTVEM--SPVATIMIHNPMTVSIGDTHEMERTITFL 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ + +D + M+A +A + G D VL
Sbjct: 132 AEIKESIINAYELRTGLSRAKISRLMDAETWMNAKKAVELGFADSVL 178
>gi|126668253|ref|ZP_01739213.1| putative protease/scaffold protein [Marinobacter sp. ELB17]
gi|126627279|gb|EAZ97916.1| putative protease/scaffold protein [Marinobacter sp. ELB17]
Length = 621
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/168 (25%), Positives = 85/168 (50%), Gaps = 4/168 (2%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL + +++ G I + + A + L+ + + +++ INS GG V+ +AIY+ +
Sbjct: 8 LLAQNEIYIYGPIGEGNVSA-KAFVDALKTLDTAQTVNVRINSEGGDVSHAIAIYNALNE 66
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ + G AAS S + AG K + NA +++H+P G G + + + + +
Sbjct: 67 LP-DVMIHIDGLAASSASFVAMAGNKTLMAG--NAILMIHRPWTGAVGDSDAMRQTGEIL 123
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
K + L Y K G + +++ + L + ++A+EA + G VD+V+
Sbjct: 124 DKFQPILVSAYAKKTGLSDDKLNEMLAAETWLTAAEALELGFVDEVIE 171
>gi|227498309|ref|ZP_03928459.1| conserved hypothetical protein [Acidaminococcus sp. D21]
gi|226903771|gb|EEH89689.1| conserved hypothetical protein [Acidaminococcus sp. D21]
Length = 235
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ GQI D + + E +I+L+INSPGG A IY+ +
Sbjct: 20 NRTLYLDGQISDETWWGDEVTPKAFKDELNAGSGDITLWINSPGGDCFAAAQIYNLLMDY 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG K P A +++H P+ G +++E+ +
Sbjct: 80 PGNVTVKIDGLAASAASVIAMAGTKVCM--SPVAMLMIHNPATLAYGDQAEMEKTIGMLS 137
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL-MSRIDIEEKSK 216
++K + Y G ++ +D + ++A +A + G D++L + EE+ +
Sbjct: 138 EVKESIINAYEIKSGLARTKISHMMDDETWLNAKKAVELGFADEILFDQKKGNEEQPE 195
>gi|295096776|emb|CBK85866.1| Protease subunit of ATP-dependent Clp proteases [Enterobacter
cloacae subsp. cloacae NCTC 9394]
Length = 69
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 44/57 (77%), Positives = 54/57 (94%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
+ LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+EDHMA LI AQ+LFLEAENP+
Sbjct: 1 MALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVEDHMANLIVAQMLFLEAENPE 57
>gi|302386147|ref|YP_003821969.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1]
gi|302196775|gb|ADL04346.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1]
Length = 236
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 79/175 (45%), Gaps = 4/175 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R +++ G+I D + +L E + +I+++INS GG V A IY+ + K
Sbjct: 17 RTLYLDGEISDETWYGDEVTPELFRRELVSGNGDITVWINSSGGDVFAAAQIYNMLMDYK 76
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ AAS S++ AG P A +++H P G + ++++ + +
Sbjct: 77 GNVTVKVDALAASAASVIAMAGTTVQM--SPVAMMMIHNPMTVAIGDSEEMKKAGAMLDE 134
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+K + Y G +V +D + +A +A + G D++L ++ EK
Sbjct: 135 VKESIMNAYEIKTGLNRTKVSHLMDAESWFNARKAVELGFADEILENKSGNREKE 189
>gi|187940099|gb|ACD39231.1| protease domain protein [Pseudomonas aeruginosa]
Length = 693
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A +I+L+I+SPGG V G AIY+ ++ + + G AASM S++ AG+
Sbjct: 63 LKAMGDLTKINLHIHSPGGDVFEGTAIYNLLRNHPASVDVYIDGLAASMASVIAMAGD-- 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA +++H+P G G A D+ R+A+ + K++ L Y GK+ ++++ L
Sbjct: 121 TIYMPENAMMMVHKPWGIQGGDADDMRRYAELLDKVEDTLVMAYANKTGKSADDIKALLK 180
Query: 186 RDHIMSASEACDWGVVDK 203
+ M+ EA G D+
Sbjct: 181 EETWMNGREAVAAGFADQ 198
>gi|187939802|gb|ACD38942.1| hypothetical protease protein [Pseudomonas aeruginosa]
Length = 693
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A +I+L+I+SPGG V G AIY+ ++ + + G AASM S++ AG+
Sbjct: 63 LKAMGDLTKINLHIHSPGGDVFEGTAIYNLLRNHPASVDVYIDGLAASMASVIAMAGD-- 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA +++H+P G G A D+ R+A+ + K++ L Y GK+ ++++ L
Sbjct: 121 TIYMPENAMMMVHKPWGIQGGDADDMRRYAELLDKVEDTLVMAYANKTGKSADDIKALLK 180
Query: 186 RDHIMSASEACDWGVVDK 203
+ M+ EA G D+
Sbjct: 181 EETWMNGREAVAAGFADQ 198
>gi|148912770|ref|YP_001293349.1| Putative Clp protease [Pseudomonas phage F10]
Length = 693
Score = 100 bits (249), Expect = 1e-19, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A +I+L+I+SPGG V G AIY+ ++ + + G AASM S++ AG+
Sbjct: 63 LKAMGDLTKINLHIHSPGGDVFEGTAIYNLLRNHPASVDVYIDGLAASMASVIAMAGD-- 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA +++H+P G G A D+ R+A+ + K++ L Y GK+ ++++ L
Sbjct: 121 TIYMPENAMMMVHKPWGIQGGDADDMRRYAELLDKVEDTLVMAYANKTGKSADDIKALLK 180
Query: 186 RDHIMSASEACDWGVVDK 203
+ M+ EA G D+
Sbjct: 181 EETWMNGREAVAAGFADQ 198
>gi|226940692|ref|YP_002795766.1| ATP-dependent Clp protease proteolytic subunit [Laribacter
hongkongensis HLHK9]
gi|226715619|gb|ACO74757.1| ATP-dependent Clp protease proteolytic subunit [Laribacter
hongkongensis HLHK9]
Length = 252
Score = 100 bits (249), Expect = 2e-19, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L INSPGG V A A+ ++ K I G AAS + + AG++ A
Sbjct: 69 IHLRINSPGGSVFAARAMEQALREHKARIVVHIDGIAASAATFIAMAGDE--IVMNKGAM 126
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++H+ +G A D+ + A + KI L + Y GK E + + + +A E
Sbjct: 127 FMIHKAWTWTAGNADDLAKEAGLLAKIDGTLAQTYADRTGKDVETINGWMADETWFTADE 186
Query: 195 ACDWGVVDKVLMSRIDIE 212
A ++G DK+ + E
Sbjct: 187 AVEYGFADKLAETEARAE 204
>gi|218890093|ref|YP_002438957.1| Putative Clp protease [Pseudomonas aeruginosa LESB58]
gi|218770316|emb|CAW26081.1| Putative Clp protease [Pseudomonas aeruginosa LESB58]
Length = 693
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A +ISL+I+SPGG V G AIY+ ++ + + G AASM S++ AG+
Sbjct: 63 LKAMGDLNKISLHIHSPGGDVFEGTAIYNLLRNHPASVDVYIDGLAASMASVIAMAGD-- 120
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA +++H+P G G A D+ R+A+ + K++ L Y GK+ ++++ L
Sbjct: 121 TIYMPENAMMMVHKPWGIQGGDADDMRRYAELLDKVEDTLVMAYANKTGKSADDIKALLK 180
Query: 186 RDHIMSASEACDWGVVDK 203
+ M+ EA G D+
Sbjct: 181 EETWMNGREAVAAGFADQ 198
>gi|194433919|ref|ZP_03066191.1| ATP-dependent protease [Shigella dysenteriae 1012]
gi|194417791|gb|EDX33888.1| ATP-dependent protease [Shigella dysenteriae 1012]
gi|332094969|gb|EGJ00009.1| clp protease family protein [Shigella dysenteriae 155-74]
Length = 663
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +EV L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEVAAMLADETWMSGAECLAHGFADQV 167
>gi|315252129|gb|EFU32097.1| Clp protease [Escherichia coli MS 85-1]
Length = 240
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 16 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 72
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 73 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 130
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 131 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 172
>gi|315293048|gb|EFU52400.1| Clp protease [Escherichia coli MS 153-1]
Length = 653
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLVDETWMSGAECLAHGFADQV 167
>gi|324021013|gb|EGB90232.1| Clp protease [Escherichia coli MS 117-3]
Length = 652
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLVDETWMSGAECLAHGFADQV 167
>gi|297837933|ref|XP_002886848.1| hypothetical protein ARALYDRAFT_475559 [Arabidopsis lyrata subsp.
lyrata]
gi|297332689|gb|EFH63107.1| hypothetical protein ARALYDRAFT_475559 [Arabidopsis lyrata subsp.
lyrata]
Length = 118
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QA 148
MAIYDTMQF++P + T CMG AAS+ S +L G R A P+A +++HQP+ F Q
Sbjct: 1 MAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPHAWVMIHQPASSFYEAQT 60
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ A++++K++ + +YV+ GK V + ++RD MSA+EA G+VD V
Sbjct: 61 GEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMSATEAQAHGIVDLV 116
>gi|295114931|emb|CBL35778.1| Protease subunit of ATP-dependent Clp proteases [butyrate-producing
bacterium SM4/1]
Length = 246
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 43/177 (24%), Positives = 79/177 (44%), Gaps = 5/177 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I + + QL E I+++INSPGG A IY+ +
Sbjct: 19 ERTLFLNGTIAEESWFDDDVTPQLFKEELMAGSGNITVWINSPGGDCVAAAQIYNMLMDY 78
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG P +++H P+ G +++ + + +
Sbjct: 79 KGDVTVKIDGIAASAASVIAMAGT--QVLISPVGMMMIHNPATIAWGDTAEMRKAIEMLA 136
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+K + Y G + ++ +D + M A +A ++G D +L R D+ E +
Sbjct: 137 SVKDSIINAYEIKTGLSRAKLSHLMDAETWMDAHKAVEFGFADGIL-GRTDLPEDME 192
>gi|218561583|ref|YP_002394496.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Escherichia coli S88]
gi|218368352|emb|CAR06171.2| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli S88]
Length = 739
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 98 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 154
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 155 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 212
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 213 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 254
>gi|260855281|ref|YP_003229172.1| putative protease/scaffold protein [Escherichia coli O26:H11 str.
11368]
gi|257753930|dbj|BAI25432.1| putative protease/scaffold protein [Escherichia coli O26:H11 str.
11368]
Length = 675
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 190
>gi|218705045|ref|YP_002412564.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli UMN026]
gi|218432142|emb|CAR13030.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) [Escherichia coli UMN026]
Length = 706
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 65 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 121
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 122 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 179
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 180 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 221
>gi|15800503|ref|NP_286515.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 EDL933]
gi|12513735|gb|AAG55123.1|AE005257_2 putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. EDL933]
Length = 675
Score = 100 bits (248), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 34 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 90
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 91 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 148
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 149 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 190
>gi|312971303|ref|ZP_07785481.1| clp protease family protein [Escherichia coli 1827-70]
gi|310336505|gb|EFQ01691.1| clp protease family protein [Escherichia coli 1827-70]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAVMLADETWMSGAECLAHGFADQV 167
>gi|115391925|ref|YP_778514.1| ATP-dependent Clp protease proteolytic subunit [Jasminum
nudiflorum]
gi|110456246|gb|ABG74651.1| ATP-dependent protease catalytic subunit [Jasminum nudiflorum]
Length = 219
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 2/152 (1%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
R + D+YS+L I+F+ I+ +A + A +++L++ +P+ +YINSPGG V
Sbjct: 44 RKQAWTDLYSKLYHGGILFLGDVIDTELANELIAAMVYLDSHHPEIRCYMYINSPGGGVF 103
Query: 88 AGMAIYDTMQF-IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG 146
G+AIYD M+ + + T GQAASM SLLL++GEKG R ALP++ I+LH+PS +
Sbjct: 104 DGLAIYDAMKNIMTQEVRTTVYGQAASMASLLLASGEKGHRIALPHSEIMLHEPSMSPTR 163
Query: 147 QASDI-ERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ + +K R+ IYV GK
Sbjct: 164 GKVEFLLSECDVLASLKERMLNIYVLETGKDR 195
>gi|309798015|ref|ZP_07692392.1| Clp protease [Escherichia coli MS 145-7]
gi|308118391|gb|EFO55653.1| Clp protease [Escherichia coli MS 145-7]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNTL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|15830083|ref|NP_308856.1| protease/scaffold protein [Escherichia coli O157:H7 str. Sakai]
gi|13360288|dbj|BAB34252.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
Sakai]
Length = 707
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 66 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 122
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 123 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 180
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 181 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 222
>gi|215486155|ref|YP_002328586.1| predicted protease/scaffold protein [Escherichia coli O127:H6 str.
E2348/69]
gi|215264227|emb|CAS08571.1| predicted protease/scaffold protein [Escherichia coli O127:H6 str.
E2348/69]
Length = 696
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 55 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 111
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 112 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 169
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 170 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 211
>gi|168786963|ref|ZP_02811970.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC869]
gi|261225398|ref|ZP_05939679.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. FRIK2000]
gi|261258634|ref|ZP_05951167.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. FRIK966]
gi|189373191|gb|EDU91607.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC869]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 79/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L +Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPVYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|320643291|gb|EFX12482.1| putative protease/scaffold protein [Escherichia coli O157:H- str.
493-89]
gi|320648633|gb|EFX17277.1| putative protease/scaffold protein [Escherichia coli O157:H- str. H
2687]
gi|323156726|gb|EFZ42864.1| clp protease family protein [Escherichia coli EPECa14]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|32364338|gb|AAP80272.1| ATP-dependent Clp protease proteolytic subunit [Malus x domestica]
Length = 120
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T C+G A ++ + LL+AGEKG RFA+P +RI L P+G GQA DI+ A ++++I+
Sbjct: 1 THCVGYAYNLAAFLLTAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDY 60
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS---RIDIEEKS 215
L G+ E++ K L R +A EA ++G++D+V+ + D K
Sbjct: 61 LFNELAMKTGQPVEKINKDLSRMKRFNAQEALEYGLIDRVVRPPRIKADAPPKD 114
>gi|117626713|ref|YP_860036.1| putative protease/scaffold protein [Escherichia coli APEC O1]
gi|331680516|ref|ZP_08381175.1| putative protease/scaffold protein [Escherichia coli H591]
gi|115515837|gb|ABJ03912.1| putative protease/scaffold protein [Escherichia coli APEC O1]
gi|331071979|gb|EGI43315.1| putative protease/scaffold protein [Escherichia coli H591]
Length = 725
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 84 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 140
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 141 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 198
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 199 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 240
>gi|313895675|ref|ZP_07829231.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975801|gb|EFR41260.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
Length = 231
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 4/167 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++RI+ + G+I D + Q+ E + ++ L+INSPGG A IY+ +
Sbjct: 14 EKRILLLDGEISDETWWGDEVTPQMFRSELHAAEGDVDLWINSPGGDCYAAAQIYNMLME 73
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG P A I++H P G ++ER +
Sbjct: 74 YKGNVAVKIDGIAASAASVVAMAGSTVEM--SPVATIMIHNPMTVSIGDTHEMERTITFL 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ + +D + M+A +A + G D VL
Sbjct: 132 SEIKESIINAYELKTGLSRAKISRLMDAETWMNAKKAVELGFADAVL 178
>gi|301025101|ref|ZP_07188695.1| Clp protease [Escherichia coli MS 69-1]
gi|300396210|gb|EFJ79748.1| Clp protease [Escherichia coli MS 69-1]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|191169469|ref|ZP_03031204.1| ATP-dependent protease [Escherichia coli B7A]
gi|293405047|ref|ZP_06649039.1| prophage Clp protease-like protein [Escherichia coli FVEC1412]
gi|298380692|ref|ZP_06990291.1| prophage Clp protease-like protein [Escherichia coli FVEC1302]
gi|300899649|ref|ZP_07117880.1| Clp protease [Escherichia coli MS 198-1]
gi|331673132|ref|ZP_08373900.1| putative protease/scaffold protein [Escherichia coli TA280]
gi|190900495|gb|EDV60309.1| ATP-dependent protease [Escherichia coli B7A]
gi|291427255|gb|EFF00282.1| prophage Clp protease-like protein [Escherichia coli FVEC1412]
gi|298278134|gb|EFI19648.1| prophage Clp protease-like protein [Escherichia coli FVEC1302]
gi|300356774|gb|EFJ72644.1| Clp protease [Escherichia coli MS 198-1]
gi|331069330|gb|EGI40717.1| putative protease/scaffold protein [Escherichia coli TA280]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|312967383|ref|ZP_07781598.1| clp protease family protein [Escherichia coli 2362-75]
gi|312287580|gb|EFR15485.1| clp protease family protein [Escherichia coli 2362-75]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|168750296|ref|ZP_02775318.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4113]
gi|168763393|ref|ZP_02788400.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4501]
gi|168767249|ref|ZP_02792256.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
gi|168776451|ref|ZP_02801458.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4196]
gi|168779292|ref|ZP_02804299.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4076]
gi|168800764|ref|ZP_02825771.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC508]
gi|195936790|ref|ZP_03082172.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
EC4024]
gi|208807803|ref|ZP_03250140.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208816401|ref|ZP_03257580.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208822227|ref|ZP_03262546.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209397527|ref|YP_002269422.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|217326328|ref|ZP_03442412.1| Clp protease domain protein [Escherichia coli O157:H7 str. TW14588]
gi|254791946|ref|YP_003076783.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. TW14359]
gi|187768186|gb|EDU32030.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4196]
gi|188015533|gb|EDU53655.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4113]
gi|189003055|gb|EDU72041.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4076]
gi|189363580|gb|EDU81999.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
gi|189366473|gb|EDU84889.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4501]
gi|189376949|gb|EDU95365.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC508]
gi|208727604|gb|EDZ77205.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4206]
gi|208733049|gb|EDZ81737.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4045]
gi|208737712|gb|EDZ85395.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4042]
gi|209158927|gb|ACI36360.1| Clp protease domain protein [Escherichia coli O157:H7 str. EC4115]
gi|217322549|gb|EEC30973.1| Clp protease domain protein [Escherichia coli O157:H7 str. TW14588]
gi|254591346|gb|ACT70707.1| putative protease encoded in prophage CP-933K [Escherichia coli
O157:H7 str. TW14359]
gi|326347959|gb|EGD71672.1| ATP-dependent Clp protease proteolytic subunit [Escherichia coli
O157:H7 str. 1044]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|193066999|ref|ZP_03047968.1| ATP-dependent protease [Escherichia coli E110019]
gi|192959589|gb|EDV90023.1| ATP-dependent protease [Escherichia coli E110019]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|320193194|gb|EFW67834.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
EC1212]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|326345681|gb|EGD69420.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
1125]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|168757092|ref|ZP_02782099.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401]
gi|189355896|gb|EDU74315.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLNINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGKP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|148609387|ref|YP_001272518.1| putative protease/scaffold protein [Phage cdtI]
gi|148524716|dbj|BAF63338.1| putative protease/scaffold protein [Phage cdtI]
Length = 652
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|220930200|ref|YP_002507109.1| peptidase S14 ClpP [Clostridium cellulolyticum H10]
gi|220000528|gb|ACL77129.1| peptidase S14 ClpP [Clostridium cellulolyticum H10]
Length = 229
Score = 99.7 bits (247), Expect = 2e-19, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ER +++ G I + + ++ E +I+++INSPGG V A IY+ +
Sbjct: 13 EERTLYLNGVISEETWWGDEVTPKIFKDELLAGTGDITVWINSPGGDVFAAAQIYNMLME 72
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG G + P + +++H PS G + ++ R +
Sbjct: 73 YTGKVTVKIDGLAASAASVIAMAG--GDVYMSPVSMLMIHNPSTIAIGDSEEMLRAKALL 130
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++K + Y G + ++ +D + M+A++A + G DK++ + +
Sbjct: 131 DEVKESIINAYELKTGLSRTKLSHLMDAESWMNANKAIELGFADKIMFMESETPD 185
>gi|313895631|ref|ZP_07829187.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975757|gb|EFR41216.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
Length = 229
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 4/172 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++R++ + G+I D + Q+ E + +I L+INSPGG A IY+ +
Sbjct: 14 EKRVLLLDGEISDETWWGDEVTPQMFRSELNAAEGDIDLWINSPGGDCYAAAQIYNMLME 73
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG P +++H P G ++ER +
Sbjct: 74 YKGNVAVKIDGIAASAASVVAMAGSTVEI--SPLGMLMIHNPMTVSIGDTHEMERTITFL 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+IK + Y G + ++ + +D + M+A +A + G D VL +
Sbjct: 132 AEIKESIINAYELRTGLSRAKISRLMDAETWMNAKKAVELGFADSVLYENRE 183
>gi|320197734|gb|EFW72342.1| putative protease/scaffold protein [Escherichia coli EC4100B]
Length = 652
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|317403655|gb|EFV84143.1| ATP-dependent Clp protease proteolytic subunit [Achromobacter
xylosoxidans C54]
Length = 369
Score = 99.7 bits (247), Expect = 3e-19, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 6/162 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A A+L A +I + +NSPGG V +AIY+ ++
Sbjct: 22 IRIYDEISFWGTTAEAFVAELDA--AAAGGADIVVSLNSPGGDVFDALAIYNALRRYAGR 79
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++T G AAS SL+ AG+ NA++++H G A D+ A + +++
Sbjct: 80 VTTRVDGFAASAASLIAMAGD--QLIMPENAQLMIHNAWTITGGTAEDLRSTADMMDRVR 137
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y + G+ +++ + +D MSA EA G D +
Sbjct: 138 DGVVAAYARKSGQDADKIVEMMDATTWMSALEAQALGFCDLI 179
>gi|331683048|ref|ZP_08383649.1| putative protease/scaffold protein [Escherichia coli H299]
gi|331079263|gb|EGI50460.1| putative protease/scaffold protein [Escherichia coli H299]
Length = 605
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|219870832|ref|YP_002475207.1| Clp protease-like protein [Haemophilus parasuis SH0165]
gi|219691036|gb|ACL32259.1| Clp protease-like protein [Haemophilus parasuis SH0165]
Length = 655
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 73/138 (52%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I L+I+SPGG V G+AIY+ ++ + + G AASM S++ G+
Sbjct: 36 LKNLGDIKHIDLHIHSPGGSVFDGIAIYNLLKNHPASKTVYIDGLAASMASVIAMLGDP- 94
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G SG A D+ ++A + KI+ Y + GK+ EE+ + L
Sbjct: 95 -VIMPKNAMMMIHKPWGIQSGDAEDMRKYADLLDKIENTTIPAYAEKTGKSPEELAEMLK 153
Query: 186 RDHIMSASEACDWGVVDK 203
+ ++A E + G DK
Sbjct: 154 EETWLTAEECVEQGFADK 171
>gi|300954440|ref|ZP_07166892.1| Clp protease [Escherichia coli MS 175-1]
gi|300318590|gb|EFJ68374.1| Clp protease [Escherichia coli MS 175-1]
Length = 637
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+L I+SPGG V G+AIY+ ++ I+ + G AASM S++ AG++
Sbjct: 38 LKALGDVSHINLRIHSPGGDVFEGIAIYNLLRNHPADITVYIDGVAASMASVVAMAGDR- 96
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A D+ +A + K++ L Y + GK+ +E+ L+
Sbjct: 97 -VVMPENAMMMIHKPWGISGGNAGDMRDYADLLDKVETVLIPAYARKTGKSAQEITAMLE 155
Query: 186 RDHIMSASEACDWGVVDKVLMS 207
+ M E G D++L S
Sbjct: 156 DETWMDGKECLKHGFADELLPS 177
>gi|323935653|gb|EGB31970.1| Clp protease [Escherichia coli E1520]
Length = 637
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+L I+SPGG V G+AIY+ ++ I+ + G AASM S++ AG++
Sbjct: 38 LKALGDVSHINLRIHSPGGDVFEGIAIYNLLRNHPADITVYIDGVAASMASVVAMAGDR- 96
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A D+ +A + K++ L Y + GK+ +E+ L+
Sbjct: 97 -VVMPENAMMMIHKPWGISGGNAGDMRDYADLLDKVETVLVPAYARKTGKSAQEITAMLE 155
Query: 186 RDHIMSASEACDWGVVDKVLMS 207
+ M E G D++L S
Sbjct: 156 DETWMDGKECLKHGFADELLPS 177
>gi|238762757|ref|ZP_04623726.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
gi|238699062|gb|EEP91810.1| ATP-dependent Clp protease proteolytic subunit [Yersinia
kristensenii ATCC 33638]
Length = 647
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGG 84
GE+S DIY + +I A + L L + I+L I+SPGG
Sbjct: 3 ASGEKSADIY----------IYEEIGYWGVTARQFASSLKALGDIDH---INLRIHSPGG 49
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V G+AIY+ + + + G AASM S++ G NA +++H+P G
Sbjct: 50 DVFEGIAIYNLLNSHPASKTVYIDGLAASMASVIAMVGNP--VIMPENAMMMIHKPWGIT 107
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+D+ +A + K++ L Y K GKT EE+ L + ++A E + G D++
Sbjct: 108 GGDANDMRDYADLLDKVEGVLIPSYAKKTGKTPEELAVMLGEETWLTAQECVEHGFADQL 167
Query: 205 LMS 207
L S
Sbjct: 168 LPS 170
>gi|315253278|gb|EFU33246.1| Clp protease [Escherichia coli MS 85-1]
Length = 606
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAQGFADQV 167
>gi|300764715|ref|ZP_07074706.1| hypothetical protein LMHG_11061 [Listeria monocytogenes FSL N1-017]
gi|300514601|gb|EFK41657.1| hypothetical protein LMHG_11061 [Listeria monocytogenes FSL N1-017]
Length = 257
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 42 ERIVFVTGQIED--HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R +++ GQI + I QL E + I+++INSPGG A IY+ ++
Sbjct: 31 DRTLYLNGQIAEVSWFDDDITPQLFKDELMSGDGNITVWINSPGGDCVAAAQIYNMLKEY 90
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG+K P A +++H PS G D+++ +
Sbjct: 91 SGDVTIKIDGLAASAASVIAMAGDK--VVMSPVAMMMIHNPSTVAFGDRVDMQKAMAMLD 148
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++K + Y G + ++ +D + M A A D G D V
Sbjct: 149 EVKESIINAYEIKTGMSRTKLAHMMDAETWMDARSAVDLGFADDV 193
>gi|145629849|ref|ZP_01785642.1| putative Clp-like protease [Haemophilus influenzae 22.1-21]
gi|144977753|gb|EDJ87697.1| putative Clp-like protease [Haemophilus influenzae 22.1-21]
Length = 680
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N K+I+L+I+SPGG V G+AIY+ ++ ++ + G AASM S++ AG +
Sbjct: 63 NNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNE--VIM 120
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
NA +++H+P G G A D+ ++A + K++ L Y GKT EE+ + L +
Sbjct: 121 PENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETW 180
Query: 190 MSASEACDWGVVDK 203
++ E + G DK
Sbjct: 181 LNGKECVEQGFADK 194
>gi|191172046|ref|ZP_03033590.1| ATP-dependent protease [Escherichia coli F11]
gi|300991767|ref|ZP_07179630.1| Clp protease [Escherichia coli MS 200-1]
gi|190907573|gb|EDV67168.1| ATP-dependent protease [Escherichia coli F11]
gi|300305521|gb|EFJ60041.1| Clp protease [Escherichia coli MS 200-1]
gi|324013002|gb|EGB82221.1| Clp protease [Escherichia coli MS 60-1]
Length = 637
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+L I+SPGG V G+AIY+ ++ I+ + G AASM S++ AG++
Sbjct: 38 LKALGDVSHINLRIHSPGGDVFEGIAIYNLLRNHPADITVYIDGVAASMASVVAMAGDR- 96
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A D+ +A + K++ L Y + GK+ +E+ L+
Sbjct: 97 -VVMPENAMMMIHKPWGISGGNAGDMRDYADLLDKVETVLIPAYARKTGKSAQEITAMLE 155
Query: 186 RDHIMSASEACDWGVVDKVLMS 207
+ M E G D++L S
Sbjct: 156 DETWMDGKECLKHGFADELLPS 177
>gi|315252308|gb|EFU32276.1| Clp protease [Escherichia coli MS 85-1]
Length = 173
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +E+ L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQV 167
>gi|145640030|ref|ZP_01795627.1| putative Clp-like protease [Haemophilus influenzae PittII]
gi|145270863|gb|EDK10783.1| putative Clp-like protease [Haemophilus influenzae PittII]
Length = 680
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N K+I+L+I+SPGG V G+AIY+ ++ ++ + G AASM S++ AG +
Sbjct: 63 NNIKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNE--VIM 120
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
NA +++H+P G G A D+ ++A + K++ L Y GKT EE+ + L +
Sbjct: 121 PENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETW 180
Query: 190 MSASEACDWGVVDK 203
++ E + G DK
Sbjct: 181 LNGKECVEQGFADK 194
>gi|42779480|ref|NP_976727.1| ClpP protease family protein [Bacillus cereus ATCC 10987]
gi|42735396|gb|AAS39335.1| ClpP protease family protein [Bacillus cereus ATCC 10987]
Length = 229
Score = 99.3 bits (246), Expect = 3e-19, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 83/175 (47%), Gaps = 4/175 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ER +++ G I + + ++ E +I+++INSPGG V A IY+ +
Sbjct: 13 EERTLYLNGVISEETWWGDEVTPKIFKDELLAGTGDITVWINSPGGDVFAAAQIYNMLME 72
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG G + P + +++H PS G + ++ R +
Sbjct: 73 YTGKVTVKIDGLAASAASVIAMAG--GDVYMSPVSMLMIHNPSTIAIGDSEEMLRAKALL 130
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++K + Y G + ++ +D + M+A++A + G DK++ + +
Sbjct: 131 DEVKESIINAYELKTGLSRTKLSHLMDAESWMNANKAIELGFADKIMFMESEAPD 185
>gi|319757818|gb|ADV69760.1| ClpP protease family protein [Streptococcus suis JS14]
Length = 231
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + GQI D + Q+ + +I+L+INSPGG V A IY+ + K
Sbjct: 14 RTLRIEGQIADETWFGDEVTPQVFKNDLHAGNGDITLWINSPGGDVFAAAQIYNMLMDYK 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AG P A +++H P G+A D+++ + + +
Sbjct: 74 GDVHVVIDGLAASAASVIAMAGT--TVSMSPVAMMMIHNPWTVAQGEAKDMQKVIEMLGE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
IK + Y G + ++ +D + +A +A + G DK+L + +
Sbjct: 132 IKESIINAYELRTGLSRTKLSHLMDSESWFNAKKAVELGFADKILFDKQE 181
>gi|301168948|emb|CBW28543.1| atp-dependent clp protease proteolytic subunit [Haemophilus
influenzae 10810]
Length = 662
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 74/134 (55%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N K+I+L+I+SPGG V G+AIY+ ++ ++ + G AASM S++ AG +
Sbjct: 45 NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNE--VIM 102
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
NA +++H+P G G A D+ ++A + K++ L Y GKT EE+ + L +
Sbjct: 103 PENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYASKTGKTPEELAEMLSAETW 162
Query: 190 MSASEACDWGVVDK 203
++ E + G DK
Sbjct: 163 LNGKECVEQGFADK 176
>gi|323484093|ref|ZP_08089463.1| ATP-dependent Clp protease [Clostridium symbiosum WAL-14163]
gi|323402535|gb|EGA94863.1| ATP-dependent Clp protease [Clostridium symbiosum WAL-14163]
Length = 236
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER + + G+I D + +L E +++++INSPGG V A IY+ +
Sbjct: 16 ERTLVLNGEISDETWFGDEVTPKLFEKELNAGAGDVTVWINSPGGDVFAAAQIYNMLMEY 75
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ AAS S++ AG P +++H P G + ++++ + +
Sbjct: 76 KGDVTVKVDALAASAASVIAMAGT--SVLISPVGMMMIHNPMTIAIGDSKEMQKAGEMLD 133
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y G + + +D + +A +A + G D +L
Sbjct: 134 EVKESIMNAYEIKTGLSRARISHLMDAESWFNAKKAVELGFADGIL 179
>gi|154504815|ref|ZP_02041553.1| hypothetical protein RUMGNA_02325 [Ruminococcus gnavus ATCC 29149]
gi|153794698|gb|EDN77118.1| hypothetical protein RUMGNA_02325 [Ruminococcus gnavus ATCC 29149]
Length = 268
Score = 98.9 bits (245), Expect = 4e-19, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
ER +F+ G I D + QL E I+++INSPGG V A IY+ ++
Sbjct: 19 MERTLFLNGMISDETWYGDEVTPQLFKDELNAGNGNITVWINSPGGDVFAAAQIYNMLRD 78
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG+ P A +++H P+ G+A D+++ +
Sbjct: 79 YKGSVTVKIDGIAASAASVIAMAGDTVCV--SPVAMMMIHNPATMAMGEAKDMQKAIAML 136
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y G T + +D + +A +A + G DK+L
Sbjct: 137 NEVKESILNAYEFKTGLTRARLSHMMDDETWFNAKKAVELGFADKIL 183
>gi|238791540|ref|ZP_04635178.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
gi|238729156|gb|EEQ20672.1| ATP-dependent Clp protease proteolytic subunit [Yersinia intermedia
ATCC 29909]
Length = 647
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 17/183 (9%)
Query: 27 NRGERSYDIYSRLLKERIVFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGG 84
GE+S DIY + +I A + L L + I+L I+SPGG
Sbjct: 3 ASGEKSADIY----------IYEEIGYWGVTARQFASSLKALGDIDH---INLRIHSPGG 49
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
V G+AIY+ + + + G AASM S++ G NA +++H+P G
Sbjct: 50 DVFEGIAIYNLLNTHPASKTVYIDGLAASMASVIAMVGNP--VIMPENAMMMIHKPWGIT 107
Query: 145 SGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G A+D+ +A + K++ L Y K GKT EE+ L + ++A E + G D++
Sbjct: 108 GGDANDMRDYADLLDKVEGVLIPSYAKKTGKTPEELAVMLGEETWLTAQECVEHGFADQL 167
Query: 205 LMS 207
L S
Sbjct: 168 LPS 170
>gi|323172062|gb|EFZ57702.1| clp protease family protein [Escherichia coli LT-68]
Length = 252
Score = 98.5 bits (244), Expect = 5e-19, Method: Composition-based stats.
Identities = 47/162 (29%), Positives = 77/162 (47%), Gaps = 7/162 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGTP--VIMPENTFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L Y + GKT +EV L + MS +E G D+V
Sbjct: 126 AVLLPAYAQKTGKTTDEVAAMLADETWMSGAECLAHGFADQV 167
>gi|257088339|ref|ZP_05582700.1| peptidase S14 [Enterococcus faecalis D6]
gi|256996369|gb|EEU83671.1| peptidase S14 [Enterococcus faecalis D6]
Length = 250
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 77/165 (46%), Gaps = 4/165 (2%)
Query: 42 ERIVFVTGQIED--HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R +++ GQI + + QL E + + I+++INSPGG A IY+ ++
Sbjct: 24 DRTLYLNGQIAEVSWFDDDVTPQLFKDELMSGEGNITVWINSPGGDCVAAAQIYNMLKEY 83
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG+K P A +++H PS G D+++ +
Sbjct: 84 SGDVTIKIDGLAASAASVIAMAGDK--VVMSPVAMMMIHNPSTVAFGDRVDMQKAMAMLD 141
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++K + Y G + ++ +D + M A A D G D V
Sbjct: 142 EVKESIINAYEIKTGMSRTKLAHMMDAETWMDARSAVDLGFADDV 186
>gi|304436385|ref|ZP_07396361.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304370654|gb|EFM24303.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 229
Score = 98.5 bits (244), Expect = 6e-19, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 77/172 (44%), Gaps = 4/172 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++R++ + G+I D + Q+ E + +I L+INSPGG A IY+ +
Sbjct: 14 EKRVLLLDGEISDETWWGDEVTPQMFRSELNAAEGDIDLWINSPGGDCYAAAQIYNMLME 73
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG P ++LH P G ++ER +
Sbjct: 74 YPGEVTVKIDGIAASAASVVAMAGSTVEI--SPLGLLMLHNPMTVSIGDTHEMERTITFL 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+IK + Y G + ++ + +D + M+A +A + G D VL +
Sbjct: 132 SEIKESIINAYELKTGLSRAKISRLMDAETWMNAKKAVELGFADSVLYENRE 183
>gi|304560655|gb|ADM43318.1| putative Clp protease [Edwardsiella tarda FL6-60]
Length = 671
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G AASM S++ G+
Sbjct: 50 LTALGQVNHINLHIHSPGGDVFDGIAIYNLLKNHPASKTVYIDGLAASMASVIAMVGDP- 108
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A+++ +A + K++ L Y + GKT +E+ L+
Sbjct: 109 -IIMPENAMMMIHKPWGVAGGDANEMRDYADLLDKVESVLIPAYAEKTGKTADEIAALLE 167
Query: 186 RDHIMSASEACDWGVVDKVLM 206
++ +S E + G DK +
Sbjct: 168 QETWLSGVECVEQGFADKTIK 188
>gi|168236516|ref|ZP_02661574.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|194737695|ref|YP_002113659.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713197|gb|ACF92418.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290311|gb|EDY29667.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
Length = 689
Score = 98.2 bits (243), Expect = 6e-19, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A +I+L+I+SPGG + G+AIY+ ++ + G A SM S++ G+
Sbjct: 48 LVALGSITQINLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDP- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G++SDI +A + K++ + IY + GK+ +++ L
Sbjct: 107 -VIMPENAMMMIHRPRGIAGGESSDIRDYADLLDKMESVIIPIYAEKTGKSPDDIAALLA 165
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ MS +E G DKV+
Sbjct: 166 SETWMSGAECVREGFADKVI 185
>gi|169257188|ref|YP_001700566.1| putative Clp protease [Salmonella phage Fels-1]
Length = 706
Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A +I+L+I+SPGG + G+AIY+ ++ + G A SM S++ G+
Sbjct: 63 LVALGSITQINLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDP- 121
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G++SDI +A + K++ + IY + GK+ +++ L
Sbjct: 122 -VIMPENAMMMIHRPRGIAGGESSDIRDYADLLDKMESVIIPIYAEKTGKSPDDIAALLA 180
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ MS +E G DKV+
Sbjct: 181 SETWMSGAECVREGFADKVI 200
>gi|16764274|ref|NP_459889.1| ATP-dependent protease [Salmonella phage Fels-1]
gi|16419422|gb|AAL19848.1| Fels-1 prophage protease subunits of ATP-dependent proteases
[Salmonella phage Fels-1]
Length = 728
Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A +I+L+I+SPGG + G+AIY+ ++ + G A SM S++ G+
Sbjct: 85 LVALGSITQINLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDP- 143
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G++SDI +A + K++ + IY + GK+ +++ L
Sbjct: 144 -VIMPENAMMMIHRPRGIAGGESSDIRDYADLLDKMESVIIPIYAEKTGKSPDDIAALLA 202
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ MS +E G DKV+
Sbjct: 203 SETWMSGAECVREGFADKVI 222
>gi|167549367|ref|ZP_02343126.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|204929808|ref|ZP_03220829.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320802|gb|EDZ06003.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|205325423|gb|EDZ13262.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 689
Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A +I+L+I+SPGG + G+AIY+ ++ + G A SM S++ G+
Sbjct: 48 LVALGSITQINLHIHSPGGSIFDGLAIYNLLKNHPARKVVYVDGVACSMASVIAMVGDP- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G++SDI +A + K++ + IY + GK+ +++ L
Sbjct: 107 -VIMPENAMMMIHRPRGIAGGESSDIRDYADLLDKMESVIIPIYAEKTGKSPDDIAALLA 165
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ MS +E G DKV+
Sbjct: 166 SETWMSGAECVREGFADKVI 185
>gi|301300713|ref|ZP_07206898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300851651|gb|EFK79350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 234
Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I+L+INSPGG V G+AI++ ++ K I+ + G AAS+ S++ +G+
Sbjct: 36 LDDLGDVKTINLHINSPGGSVFEGIAIHNMLKMHKAKINVYVDGLAASIASVIAMSGD-- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G + ++ + A D+ +I + + Y+ E + K
Sbjct: 94 TIFMPENSMLMIHNPWTVAMGNSKELRKQADDLDRIAQMSVKTYLSKSNGKIDEETLVKL 153
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
LD + +SA EA D+G+ D+VL S +
Sbjct: 154 LDEETWLSAQEAVDYGLADEVLESNKAVAS 183
>gi|313896528|ref|ZP_07830079.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
gi|312974952|gb|EFR40416.1| endopeptidase Clp [Selenomonas sp. oral taxon 137 str. F0430]
Length = 229
Score = 98.2 bits (243), Expect = 7e-19, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 4/172 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++RI+ + G+I D I Q+ E + +I L+INSPGG A IY+ +
Sbjct: 14 EKRILLLDGEISDETWWGDEITPQMFRSELNAAEGDIDLWINSPGGDCYAAAQIYNMLME 73
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S + P +++H P G ++ER +
Sbjct: 74 YKGNVAVKIDGIAASAASAVAM--AGSNVEISPLGMLMIHNPMTVSIGDTHEMERTITFL 131
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+IK + Y G + ++ + +D + M+A +A + G D VL +
Sbjct: 132 SEIKESIINAYELKTGLSRAKISRLMDAETWMNAKKAVELGFADSVLYENRE 183
>gi|145635838|ref|ZP_01791529.1| putative Clp-like protease [Haemophilus influenzae PittAA]
gi|145266895|gb|EDK06908.1| putative Clp-like protease [Haemophilus influenzae PittAA]
Length = 657
Score = 97.8 bits (242), Expect = 8e-19, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N K+I+L+I+SPGG V G+AIY+ ++ ++ + G AASM S++ AG +
Sbjct: 44 NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPANVTVYIDGLAASMASVIAMAGNE--VIM 101
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
NA +++H+P G G A D+ ++A + K++ L Y GK EE+ + L +
Sbjct: 102 PENAMMMIHKPWGIQGGDAEDMRKYADLLDKVENTLIPAYANKTGKPPEELAEMLSVETW 161
Query: 190 MSASEACDWGVVDK 203
++ E + G DK
Sbjct: 162 LNGKECVEQGFADK 175
>gi|293401151|ref|ZP_06645295.1| Clp protease [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291305277|gb|EFE46522.1| Clp protease [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 241
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 81/176 (46%), Gaps = 5/176 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
ER +F+ G I + + QL E + +I+++INSPGG A IY+ +
Sbjct: 12 MERTLFLNGTIAEESWFDDDVTPQLFKDELLSGSGDITVWINSPGGDCVAAAQIYNMLMD 71
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG K P + +++H P G ++E+ +
Sbjct: 72 YKGNVTVKIDGIAASAASVIAMAGTK--VLVSPVSMMMIHNPMTVAFGNTGEMEKAIAML 129
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
++K + Y G + ++ +D + M+A+ A + G D+V+ R + +
Sbjct: 130 DEVKESIINAYEIKTGLSRAKLSHLMDAETWMNANMAVELGFADEVM-KREEADND 184
>gi|170755513|ref|YP_001782120.1| putative Clp protease [Clostridium botulinum B1 str. Okra]
gi|169120725|gb|ACA44561.1| putative Clp protease [Clostridium botulinum B1 str. Okra]
Length = 252
Score = 97.8 bits (242), Expect = 9e-19, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 80/146 (54%), Gaps = 4/146 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ +++YINSPGG V G AIY+ ++ K I+ G AAS+ S++ AG+
Sbjct: 46 LDSLGDIDTLNIYINSPGGSVFQGTAIYNIIKRHKAKINIHVDGVAASIASVIAMAGD-- 103
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G A+++ + A D+ KI+ L E Y+ G + E + +
Sbjct: 104 TIFMPKNSMMMIHNPWTFAWGNANELRKQADDLDKIRESLIEAYLSKAGDKLSRETLIEI 163
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + ++A E D+G+ D+++ +
Sbjct: 164 MDNETWLTAQECYDYGLCDELVEEKE 189
>gi|300214522|gb|ADJ78938.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius CECT 5713]
Length = 234
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I+L+INSPGG V G+AI++ ++ K I+ + G AAS+ S++ +G+
Sbjct: 36 LDDLGDVKTINLHINSPGGSVFEGIAIHNMLKMNKAKINVYVDGLAASIASVIAMSGD-- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G + ++ + A D+ +I + + Y+ E + K
Sbjct: 94 TIFMPENSMLMIHNPWTVAMGNSKELRKQADDLDRIAQASVKTYLSKSNGKIDEETLVKL 153
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
LD + +SA EA D+G+ D+VL S +
Sbjct: 154 LDEETWLSAQEAVDYGLADEVLESNKAVAS 183
>gi|237738653|ref|ZP_04569134.1| peptidase S14 ClpP [Fusobacterium sp. 2_1_31]
gi|229424136|gb|EEO39183.1| peptidase S14 ClpP [Fusobacterium sp. 2_1_31]
Length = 358
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D + + + + I+++INSPGG V A +AI +T++ K ++ F G AA
Sbjct: 32 DDVCDKTIKEEIG--NLGDVENINVHINSPGGSVFAAVAIANTLKNHKAKVTAFIDGLAA 89
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY-VK 171
S +++ SA + + NA ++H P G ++E+ + K+K + E Y K
Sbjct: 90 SAATIITSACD--VVKMPKNAMFMIHNPLTWAYGNKQELEKTGILLDKVKDSILETYLAK 147
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
GKT EE+ +D + +A EA ++G +D+++
Sbjct: 148 AKGKTKEELSALMDEEKWFNAEEAKEYGFIDEIVD 182
>gi|313575379|emb|CBR26908.1| hypothetical protein [Streptococcus phage phi-SsUD.1]
Length = 236
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 9/178 (5%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + GQI + + Q+ + +I+L+INSPGG V A IY+ + K
Sbjct: 19 RTLRIEGQIAEETWFGDEVTPQVFKNDLHAGSGDITLWINSPGGDVFAAAQIYNMLMDYK 78
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AG P A +++H P G+A D+++ + + +
Sbjct: 79 GDVHVVIDGLAASAASVIAMAGT--TVSMSPVAMMMIHNPWTVAQGEAKDMQKVIEMLGE 136
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL-----MSRIDIEE 213
IK + Y G + ++ +D + +A +A + G DK+L R++ E
Sbjct: 137 IKESIINAYELRTGLSRTKLSHLMDSESWFNAKKAVELGFADKILFDKQEEHRMETES 194
>gi|194467896|ref|ZP_03073882.1| peptidase S14 ClpP [Lactobacillus reuteri 100-23]
gi|194452749|gb|EDX41647.1| peptidase S14 ClpP [Lactobacillus reuteri 100-23]
Length = 258
Score = 97.4 bits (241), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/153 (26%), Positives = 82/153 (53%), Gaps = 4/153 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ K I+L+INSPGG V G+AIY+ ++ I+ + G AAS+ S++ +G+
Sbjct: 48 LKSLGDVKNINLHINSPGGSVFEGIAIYNMLKQNSAHINVYIDGLAASIASVIAMSGDA- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G A+++ + A + +I + + Y+ G + + +
Sbjct: 107 -IFMPSNSMMMVHNPWVMAIGNANELRKQADALDQITKSSVQTYLAKAGDKLDEKTLTQL 165
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+D + ++A EA D+G+ D+V+ + +K
Sbjct: 166 MDDETWLTAQEAVDYGLADEVMEPNKAVASINK 198
>gi|294788380|ref|ZP_06753623.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Simonsiella muelleri ATCC 29453]
gi|294483811|gb|EFG31495.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Simonsiella muelleri ATCC 29453]
Length = 277
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 41/170 (24%), Positives = 83/170 (48%), Gaps = 4/170 (2%)
Query: 44 IVFVTGQI-EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
++ + G + +D T + Q + E + +I++ INSPGG G+AIY+ ++
Sbjct: 42 VLLLYGVVGDDWSDTPVTPQAVA-EFLKGKGDITVSINSPGGNYFDGIAIYNLLRAHPHK 100
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ +G AAS S++ AG+ A +++H G G +D+ + + ++
Sbjct: 101 ITVQVIGDAASAASVIAMAGD--NILMGEGAFMMIHNCWGVVVGNRADLAESIELMEQLD 158
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++YV GK E+ +D + ++A EA + G+ L ++ D +
Sbjct: 159 NAMTKLYVAQSGKDEAEIAAMMDAETWLNADEAVECGLATGHLHTKADKQ 208
>gi|90961762|ref|YP_535678.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage
Sal1]
gi|90820956|gb|ABD99595.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage
Sal1]
Length = 249
Score = 97.0 bits (240), Expect = 1e-18, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 80/150 (53%), Gaps = 4/150 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I+L+INSPGG V G+AI++ ++ K I+ + G AAS+ S++ +G+
Sbjct: 51 LDDLGDVKTINLHINSPGGSVFEGIAIHNMLKMNKAKINVYVDGLAASIASVIAMSGD-- 108
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G + ++ + A D+ +I + + Y+ E + K
Sbjct: 109 TIFMPENSMLMIHNPWTVAMGNSKELRKQADDLDRIAQASVKTYLSKSNGKIDEETLVKL 168
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
LD + +SA EA D+G+ D+VL S +
Sbjct: 169 LDEETWLSAQEAVDYGLADEVLESNKAVAS 198
>gi|325662072|ref|ZP_08150691.1| hypothetical protein HMPREF0490_01429 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471735|gb|EGC74954.1| hypothetical protein HMPREF0490_01429 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 275
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 81/178 (45%), Gaps = 5/178 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER + + G I + Q+ E +I+++INSPGG A IY+ +
Sbjct: 25 ERTLELYGTIAEESWFDDDFTPQMFKDELNAGSGDITVWINSPGGDCVAAAQIYNMLANY 84
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG P + +++H P+ G +++E+ + +
Sbjct: 85 KGNVTVKIDGIAASAASVIAMAGS--TVLMSPVSMMMIHNPATFAFGDHAEMEKAIEMLD 142
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI-DIEEKSK 216
+K + Y G + ++ + +D + M A++A + G D ++ +E+SK
Sbjct: 143 GVKDSIINAYTLKTGMSRAKLSRLMDAETWMDATKAVELGFADNIITKNEFPKKEESK 200
>gi|296102058|ref|YP_003612204.1| ATP-dependent protease [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056517|gb|ADF61255.1| ATP-dependent protease [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 638
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ I+L+I+SPGG V G+AIY+ + ++ G AASM S++ AG++
Sbjct: 38 LKTLGDISHINLHIHSPGGDVFDGIAIYNLLNKHPAKVTVQIDGLAASMASVIAMAGDR- 96
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A+D+ +A+ + K++ L Y + GK+ E + + L+
Sbjct: 97 -IVMPENALMMIHKPWGISGGNANDMRDYAELLDKVESVLIPAYARKTGKSAESLAEMLE 155
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ M E G D++L
Sbjct: 156 DETWMDGRECVAQGFADELL 175
>gi|307258170|ref|ZP_07539920.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306863355|gb|EFM95288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
Length = 675
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A L L + K+I L+I+SPGG V G+AI++ ++
Sbjct: 27 ISIYDEIGGWGVSAQQFATDLKALGS--NIKQIDLHIHSPGGSVFDGIAIFNLLKNHPAN 84
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ G K NA +++H+P G G A D+ ++A + K++
Sbjct: 85 KTVYIDGLAASMASVIAMVGNK--VIMPENAMMMIHKPWGIQGGDADDMRKYADLLDKLE 142
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L Y GKT EE+ + L + M+ EA + G D+
Sbjct: 143 ATLIPAYASKTGKTEEELAQMLAVETWMNGKEAVEQGFADE 183
>gi|84391274|ref|ZP_00991605.1| ATP-dependent protease [Vibrio splendidus 12B01]
gi|84376563|gb|EAP93441.1| ATP-dependent protease [Vibrio splendidus 12B01]
Length = 670
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 8/164 (4%)
Query: 45 VFVTGQIE--DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V+V G I D AT I A L KE+ L + S GG V G+A+Y+ ++ K
Sbjct: 20 VWVHGDISAWDIDATEIIAALQV----ANGKEVELRMLSGGGSVYQGLAMYNALKAHKGK 75
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ G AAS+ + +L A + NA +++H P+ G G +I Q +
Sbjct: 76 VVGIVDGMAASIATYVLLACD--SIRMPENAMLMIHNPAIGAWGGEKEINSALQQLQAAT 133
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ ++E Y + G+ EEV ++ + +A A DWG+VD+V+
Sbjct: 134 KTISEAYAEKSGQPLEEVLTAMESETWFTAQAAKDWGLVDEVVE 177
>gi|153955259|ref|YP_001396024.1| Phage-related protease [Clostridium kluyveri DSM 555]
gi|219855684|ref|YP_002472806.1| hypothetical protein CKR_2341 [Clostridium kluyveri NBRC 12016]
gi|146348117|gb|EDK34653.1| Phage-related protease [Clostridium kluyveri DSM 555]
gi|219569408|dbj|BAH07392.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 229
Score = 97.0 bits (240), Expect = 2e-18, Method: Composition-based stats.
Identities = 40/175 (22%), Positives = 82/175 (46%), Gaps = 4/175 (2%)
Query: 41 KERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ R +++ G I + + ++ E +I+++INSPGG V A IY+ +
Sbjct: 13 EGRTLYLNGVISEETWWGDEVTPKMFKDELLAGTGDITVWINSPGGDVFAAAQIYNMLMD 72
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG G + P + I++H PS G + ++ R +
Sbjct: 73 YTGKVTVKIDGLAASAASVIAMAG--GDVYMSPVSMIMIHNPSTIAIGDSEEMLRAKALL 130
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++K + Y G + ++ +D + M+A++A + G DK++ + +
Sbjct: 131 DEVKESIINAYELKTGLSRIKLSHLMDAESWMNANKAIELGFADKIMFMESETPD 185
>gi|254242214|ref|ZP_04935536.1| hypothetical protein PA2G_02948 [Pseudomonas aeruginosa 2192]
gi|126195592|gb|EAZ59655.1| hypothetical protein PA2G_02948 [Pseudomonas aeruginosa 2192]
Length = 696
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Query: 45 VFVTGQIEDHMATLICAQ--LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A I AQ L+A ISL ++SPGG V G AIY+ ++
Sbjct: 45 ILLYDEIG---AWGITAQQFARELKALGDLSLISLRVHSPGGDVFEGTAIYNLLKHHPAR 101
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM +++L + + + NA +++H+P G G+A D+ R+A + KI+
Sbjct: 102 VEGYVDGLAASMATVVLMSCD--VIHIPENAMMMVHRPWGIQGGEADDMRRYADLLEKIE 159
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ Y+ GK+ E+++ L + M EA + G D+
Sbjct: 160 GTMVAAYMAKTGKSEEDIKALLKAETWMDGREAVEAGFADQ 200
>gi|315165627|gb|EFU09644.1| Clp protease [Enterococcus faecalis TX1302]
Length = 239
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + +I++ +NSPGG V G+ IY+ +
Sbjct: 20 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTDDITIKLNSPGGDVFEGVEIYNYL 76
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 77 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 134
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 135 ALETIDDSILSIYSQKTGQTTDQLETWMKEEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 194
>gi|296085709|emb|CBI29508.3| unnamed protein product [Vitis vinifera]
Length = 169
Score = 96.6 bits (239), Expect = 2e-18, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+ + NS + +AI +++K I T C+G +LLL AG KG R
Sbjct: 4 ISCICTCIFWSNSLLLFPISDLAIIFCCRYVKSLIFTLCVGNPWGEAALLLVAGAKGNRS 63
Query: 129 ALPNARILLHQ--------PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
ALP++ I+L Q P GQA+DI+ +++ +K L ++Y K+ GK+ E++
Sbjct: 64 ALPSSTIMLKQSCPPINLHPIARLQGQATDIDLARKEVKNVKAELVKLYAKHVGKSPEQI 123
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
E + R S SE ++ ++DKVL + E++
Sbjct: 124 EADIRRPKYFSPSEGVEYSIIDKVLYNERSSEDR 157
>gi|327252451|gb|EGE64110.1| clp protease family protein [Escherichia coli STEC_7v]
Length = 629
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
EI L I+SPGG + G+AIY+ ++ G AASM S + G+ NA
Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD--HIVMPENA 101
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H P G +G + D+ R A + K+ + E Y G++ +E+ ++ + M +
Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGN 161
Query: 194 EACDWGVVDKVL 205
E G D+V+
Sbjct: 162 ECKANGFADEVI 173
>gi|302876770|ref|YP_003845403.1| peptidase S14 ClpP [Clostridium cellulovorans 743B]
gi|302579627|gb|ADL53639.1| peptidase S14 ClpP [Clostridium cellulovorans 743B]
Length = 257
Score = 96.2 bits (238), Expect = 2e-18, Method: Composition-based stats.
Identities = 41/168 (24%), Positives = 80/168 (47%), Gaps = 4/168 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I + + QL E + +I+++INSPGG A IY+ +
Sbjct: 19 ERTLFLNGTIAEESWFDDDVTPQLFKDELNAGEGDITVWINSPGGDCVAAAQIYNMLSNY 78
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG++ P + +++H P G +++++ +
Sbjct: 79 KGKVTVKIDGIAASAASVIAMAGKE--VLMSPVSMLMIHNPMTIAMGDHAEMQKAIDMLA 136
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
++K + YV G + ++ +D + M+A++A + G D L
Sbjct: 137 EVKESIINAYVLKTGLSRAKLSHLMDSETWMNANKAVELGFADGTLTR 184
>gi|300902358|ref|ZP_07120346.1| Clp protease [Escherichia coli MS 84-1]
gi|300405561|gb|EFJ89099.1| Clp protease [Escherichia coli MS 84-1]
Length = 168
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 77/161 (47%), Gaps = 7/161 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ +I A + L L I+L+INSPGG V G+AI++ ++
Sbjct: 11 IYIYDEIGFWGVTAKQFISDLNAL---GDITHINLHINSPGGDVFEGIAIFNALKTHGAS 67
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G N+ +++H+P G G A D+ +A + K++
Sbjct: 68 ITVYVDGVAASMASVIAMVGNP--VIMPENSFMMIHKPFGFTGGDAEDMRTYADLLDKVE 125
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L Y + GKT +E+ L + MS +E G D+
Sbjct: 126 AVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAHGFADQ 166
>gi|294780291|ref|ZP_06745660.1| Clp protease [Enterococcus faecalis PC1.1]
gi|294452555|gb|EFG20988.1| Clp protease [Enterococcus faecalis PC1.1]
Length = 239
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + +I++ +NSPGG V G+ IY+ +
Sbjct: 20 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTDDITIKLNSPGGDVFEGVEIYNYL 76
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 77 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 134
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 135 ALETIDDSILSIYSQKTGQTTDQLETWMKEEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 194
>gi|315170930|gb|EFU14947.1| Clp protease [Enterococcus faecalis TX1342]
Length = 247
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 86/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + ++I++ +NSPGG V G+ IY+ +
Sbjct: 20 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTEDITIKLNSPGGDVFEGVEIYNYL 76
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 77 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 134
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 135 ALETIDDSILSIYSQKTGQTTDQLETWMKEEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 194
>gi|168756419|ref|ZP_02781426.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401]
gi|168770135|ref|ZP_02795142.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
gi|189356545|gb|EDU74964.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4401]
gi|189361013|gb|EDU79432.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
Length = 629
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
EI L I+SPGG + G+AIY+ ++ G AASM S + G+ NA
Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD--HIVMPENA 101
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H P G +G + D+ R A + K+ + E Y G++ +E+ ++ + M +
Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGN 161
Query: 194 EACDWGVVDKVL 205
E G D+V+
Sbjct: 162 ECKANGFADEVI 173
>gi|168769871|ref|ZP_02794878.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
gi|195937919|ref|ZP_03083301.1| putative protease/scaffold protein [Escherichia coli O157:H7 str.
EC4024]
gi|189361107|gb|EDU79526.1| ATP-dependent protease [Escherichia coli O157:H7 str. EC4486]
Length = 629
Score = 96.2 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
EI L I+SPGG + G+AIY+ ++ G AASM S + G+ NA
Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD--HIVMPENA 101
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H P G +G + D+ R A + K+ + E Y G++ +E+ ++ + M +
Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGN 161
Query: 194 EACDWGVVDKVL 205
E G D+V+
Sbjct: 162 ECKANGFADEVI 173
>gi|269102625|ref|ZP_06155322.1| ATP-dependent protease [Photobacterium damselae subsp. damselae CIP
102761]
gi|268162523|gb|EEZ41019.1| ATP-dependent protease [Photobacterium damselae subsp. damselae CIP
102761]
Length = 658
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 39/164 (23%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 45 VFVTGQIE--DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V++ G I + A + L + +++ I Y GG V G+A+Y+ ++ K
Sbjct: 22 VWIHGDIGSYEIAAIDLIKALQSIGSQDVHFRIQSY----GGSVYEGLAMYNAIKAHKGK 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
G AS+ S L A ++ NA++++H P+ G G ++E + K
Sbjct: 78 TVGIVDGLVASISSYFLMACDE--VHMPENAKLMIHDPAIGAWGGEDELESALTQLKNAK 135
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + E YV+ G++ ++V + + ++ +AS+A ++G++D+V+
Sbjct: 136 QTIAEAYVERSGQSLDDVLEAMAKETWFTASQALEFGLIDQVID 179
>gi|326338731|gb|EGD62551.1| Prophage Clp protease-like protein [Escherichia coli O157:H7 str.
1125]
Length = 629
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
EI L I+SPGG + G+AIY+ ++ G AASM S + G+ NA
Sbjct: 44 EIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD--HIVMPENA 101
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H P G +G + D+ R A + K+ + E Y G++ +E+ ++ + M +
Sbjct: 102 MMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWMDGN 161
Query: 194 EACDWGVVDKVL 205
E G D+V+
Sbjct: 162 ECKANGFADEVI 173
>gi|323693294|ref|ZP_08107512.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|323502777|gb|EGB18621.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
Length = 236
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 4/173 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I + + +L E +I+++INSPGG A IY+ M
Sbjct: 12 ERTLFLNGTIAEESWFDDDVTPKLFRDELFAGNGDITIWINSPGGDCVAAAQIYNMMIEY 71
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG K P + +++H P G S++++ +
Sbjct: 72 PGNVTVKIDGIAASAASVIAMAGTK--VLVSPVSMLMIHNPMTAAMGDTSEMQKAIAMLD 129
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
++K + Y G + ++ +D + M A A D G D++L +
Sbjct: 130 EVKESIINAYEIKTGMSRAKLSHLMDAETWMDAHTAIDMGFADEILTRPAETP 182
>gi|315033068|gb|EFT45000.1| Clp protease [Enterococcus faecalis TX0017]
Length = 239
Score = 95.9 bits (237), Expect = 3e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + +I++ +NSPGG V G+ IY+ +
Sbjct: 20 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTDDITIKLNSPGGDVFEGVEIYNYL 76
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 77 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 134
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 135 ALETIDDSILSIYSQKTGQTTDQLETWMREEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 194
>gi|189463031|ref|ZP_03011816.1| hypothetical protein BACCOP_03733 [Bacteroides coprocola DSM 17136]
gi|198276521|ref|ZP_03209052.1| hypothetical protein BACPLE_02716 [Bacteroides plebeius DSM 17135]
gi|237708586|ref|ZP_04539067.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|260642222|ref|ZP_05414941.2| putative prophage L54a, Clp protease [Bacteroides finegoldii DSM
17565]
gi|189430313|gb|EDU99297.1| hypothetical protein BACCOP_03733 [Bacteroides coprocola DSM 17136]
gi|198270609|gb|EDY94879.1| hypothetical protein BACPLE_02716 [Bacteroides plebeius DSM 17135]
gi|229457515|gb|EEO63236.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
gi|260623181|gb|EEX46052.1| putative prophage L54a, Clp protease [Bacteroides finegoldii DSM
17565]
Length = 368
Score = 95.5 bits (236), Expect = 4e-18, Method: Composition-based stats.
Identities = 55/167 (32%), Positives = 90/167 (53%), Gaps = 9/167 (5%)
Query: 45 VFVTGQIED--HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+F+ G I D + + AQ L EAE + I + INS GG V +G+AI++ ++ +
Sbjct: 39 IFLYGDIGDYTEVQSGRIAQELM-EAERVSRRIHVRINSNGGEVYSGIAIFNALRHSQAD 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I + G AASM S++ G+ AR++LH SGG G D++R ++I ++
Sbjct: 98 IRIYVDGIAASMASVIALCGKPVEM--SKYARLMLHSVSGGCYGNKQDLQRCMEEIESLE 155
Query: 163 RRLNEIYVKNCGKTYEEVEK---TLDRDHIMSASEACDWGVVDKVLM 206
L+EIY + G + EEV++ + DH ++A EA D G +D +
Sbjct: 156 GSLSEIYAERLGMSKEEVKQTYFDGE-DHWLTAKEALDLGFIDDIYD 201
>gi|227519561|ref|ZP_03949610.1| Clp protease [Enterococcus faecalis TX0104]
gi|312902470|ref|ZP_07761676.1| Clp protease [Enterococcus faecalis TX0635]
gi|227073010|gb|EEI10973.1| Clp protease [Enterococcus faecalis TX0104]
gi|310634140|gb|EFQ17423.1| Clp protease [Enterococcus faecalis TX0635]
gi|315579722|gb|EFU91913.1| Clp protease [Enterococcus faecalis TX0630]
Length = 239
Score = 95.5 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + +I++ +NSPGG V G+ IY+ +
Sbjct: 20 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTDDITIKLNSPGGDVFEGVEIYNYL 76
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 77 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 134
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 135 ALETIDDSILSIYSQKTGQTTDQLETWMREEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 194
>gi|74311435|ref|YP_309854.1| putative protease/scaffold protein [Shigella sonnei Ss046]
gi|73854912|gb|AAZ87619.1| putative protease/scaffold protein [Shigella sonnei Ss046]
Length = 381
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
EI L I+SPGG + G+AIY+ ++ G AASM S + G+
Sbjct: 41 NVPEIHLRIHSPGGDIFEGLAIYNALKNHPAKKIVHIEGMAASMASFIAMCGD--HIVMP 98
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
NA +++H P G +G + D+ R A + K+ + E Y G++ +E+ ++ + M
Sbjct: 99 ENAMMMIHAPRGVTAGVSGDVRRFADLMDKLGDTMAETYAGRTGRSKQEITAMMEAETWM 158
Query: 191 SASEACDWGVVDKVL 205
+E G D+V+
Sbjct: 159 DGNECKANGFADEVI 173
>gi|257090835|ref|ZP_05585196.1| conserved hypothetical protein [Enterococcus faecalis CH188]
gi|256999647|gb|EEU86167.1| conserved hypothetical protein [Enterococcus faecalis CH188]
Length = 243
Score = 95.1 bits (235), Expect = 6e-18, Method: Composition-based stats.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 11/180 (6%)
Query: 43 RIVFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
R++ ++G I +D + I A+ + + +I++ +NSPGG V G+ IY+ +
Sbjct: 24 RVLTLSGNIRKKYWSDDDV---IDAKSIRETLDGVTDDITIKLNSPGGDVFEGVEIYNYL 80
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ G AAS + +LSA ++ + +++H+ S G DI++
Sbjct: 81 KDHPSKVTVEVTGVAASAATFILSAADEAIMNVG--TSVMIHEASTFTWGNKQDIQKTLN 138
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ I + IY + G+T +++E + + +A EA ++G +V + SK
Sbjct: 139 ALETIDDSILSIYSQKTGQTTDQLETWMREEKWFTAEEAVEYGFATEVKKNTEKNSTDSK 198
>gi|254523177|ref|ZP_05135232.1| peptidase S14, ClpP [Stenotrophomonas sp. SKA14]
gi|219720768|gb|EED39293.1| peptidase S14, ClpP [Stenotrophomonas sp. SKA14]
Length = 245
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 70/173 (40%), Gaps = 16/173 (9%)
Query: 41 KERIVFV-------TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
KE +++ G I++ M A + I L I+SPGG V A ++
Sbjct: 27 KEATIYLHGVIGGWWGDIDETMFAQAMAGI-------DADVIHLRIDSPGGDVFAARSMM 79
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
+ K + G AAS + + A +K A ++H G +D+ +
Sbjct: 80 TAIAQHKATVIAHIDGLAASAMTGVCMACDKVEISQG--AGFMIHNAWTITVGNKADMIK 137
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + KI L Y + GK ++ + +D + +A EA + G D+V+
Sbjct: 138 TGELLAKIDAGLAGDYTRRTGKDQSQIVQWMDEETWFTADEAKEHGFADEVVE 190
>gi|302344005|ref|YP_003808534.1| peptidase S14 ClpP [Desulfarculus baarsii DSM 2075]
gi|301640618|gb|ADK85940.1| peptidase S14 ClpP [Desulfarculus baarsii DSM 2075]
Length = 245
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 72/178 (40%), Gaps = 9/178 (5%)
Query: 42 ERIVFVTGQIEDH---MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
E +++ I A L + A I L INSPGG V A+ +Q
Sbjct: 41 EATIYLYDAIGGWFGITAADFVRDLQGITA----STIHLRINSPGGGVFEAEAMQTALQQ 96
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I G AAS + A ++ A ++H G G A+++ +A +
Sbjct: 97 HPARIIAHIDGLAASAAGFVALAADEIEMADG--AFFMIHNAWGVAVGDATEMLDYAAML 154
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K+ L Y + G + E + + + +SA+EA D G VD+V + +++ +
Sbjct: 155 EKMDANLVRDYRRKTGHSAERIATWMQAETWLSAAEALDLGFVDRVFTPKSQKKDEDQ 212
>gi|56419065|ref|YP_146383.1| serine protease [Geobacillus kaustophilus HTA426]
gi|56378907|dbj|BAD74815.1| serine protease (phage related-protein, ClpP family) [Geobacillus
kaustophilus HTA426]
Length = 255
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 8/168 (4%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I D T + L+A I+LYINSPGG V G+AI++ ++ K
Sbjct: 24 IFIYGDIVSYQWDETDTSAASFKKDLDAVGDVDTINLYINSPGGNVFEGVAIHNMLKRHK 83
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I+ + AAS+ S++ AG+ NA +++H P G A+++ + A D+ +
Sbjct: 84 AKINVYVDALAASIASVIAMAGD--TIHMPKNAMLMIHNPWTWTYGNAAELRKVADDLDR 141
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
I + + Y++ G T E++++ LD + +SA EA + G+ D VL
Sbjct: 142 IGNSIKQTYLQKAGDKLTEEKLQEMLDAETWLSADEAYEHGLCDVVLE 189
>gi|50914485|ref|YP_060457.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
gi|40218571|gb|AAR83225.1| phage portal protein [Streptococcus pyogenes]
gi|50261616|gb|AAT72384.1| protease [Streptococcus pyogenes]
gi|50903559|gb|AAT87274.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
Length = 228
Score = 94.7 bits (234), Expect = 7e-18, Method: Composition-based stats.
Identities = 44/166 (26%), Positives = 83/166 (50%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I E + QL E + Q +I+L+INSPGG V A IY+ +
Sbjct: 13 ERTLFLNGVIASESWFGDEVTPQLFKDELLSEQGDITLWINSPGGDVFAAAQIYNMLMDY 72
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG + P + +++H P+ SG ++E+ Q +
Sbjct: 73 KGAVTVNIDGIAASAASVIAMAGT--IVNMSPVSMMMIHNPATFASGDKREMEKAIQLLN 130
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++K + Y + +++ +D + ++A +A + G D+++
Sbjct: 131 EVKESIINAYEIKTSLSRQKLSNLMDGETWLNAKKAVELGFADQII 176
>gi|322381666|ref|ZP_08055631.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
gi|321154378|gb|EFX46689.1| ATP-dependent Clp protease proteolytic subunit-like protein
[Paenibacillus larvae subsp. larvae B-3650]
Length = 238
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I D + T + L+ I+LYINSPGG V G+AI++ ++ K
Sbjct: 11 IFIYGDIVTYQWDEVDTSATSFKEDLDRLGDLSTINLYINSPGGSVFEGIAIHNMLKRHK 70
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ AAS+ S++ AG+ + N+ +++H P G AS++ + A D+ +
Sbjct: 71 ANVHVHVDALAASIASVIAMAGDP--FYMPKNSMLMIHNPWIFAWGNASEMRKIADDLDR 128
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I ++Y++ G + E+++ LD + +SA EA ++G+ D V
Sbjct: 129 IGNSSKQVYLQKAGDKLSDEKLQDMLDAETWLSADEAFEYGLCDVV 174
>gi|114331459|ref|YP_747681.1| peptidase S14, ClpP [Nitrosomonas eutropha C91]
gi|114308473|gb|ABI59716.1| peptidase S14, ClpP [Nitrosomonas eutropha C91]
Length = 228
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 4/167 (2%)
Query: 42 ERIVFVTGQI-EDHMATLICAQLLFLEAENPQKE-ISLYINSPGGVVTAGMAIYDTMQFI 99
E +++ I D + A E + I L INSPGG V + AI ++
Sbjct: 10 EATIYLYDTIVSDDFWGGVTAISFVKELMAIKAPVIHLRINSPGGDVFSARAIETAIREH 69
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ G AAS S + A + A ++H+ G A D+ A +
Sbjct: 70 NSEVIAHIDGVAASAASYIALAAD--NIVIAEGAFYMIHKAWSFAMGNADDLLEMAALLE 127
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
K+ L Y K G+ +++ + + SA+EA ++G D V
Sbjct: 128 KVDESLVTTYAKRTGQAEDQIRDWMRNETWFSAAEAVEYGFADSVAE 174
>gi|218891274|ref|YP_002440141.1| ClpP protease [Pseudomonas aeruginosa LESB58]
gi|218771500|emb|CAW27267.1| ClpP protease [Pseudomonas aeruginosa LESB58]
Length = 296
Score = 94.7 bits (234), Expect = 8e-18, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 6/170 (3%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ + + I + + A+ + L + ++++ INSPGG V G+AIY+ ++
Sbjct: 43 DSTITIYEPIGYDWWTGEGVTAKRIAGALRSIGSDIDVTVNINSPGGDVFEGLAIYNLLR 102
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K ++ +G AAS S + AG++ A +++H G +D+ A
Sbjct: 103 EHKGKVTVNIIGLAASAASFIAMAGDEIRI--GRAAFLMIHNAWLIAMGNRNDLREIADW 160
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ L +IY + G +++ K +D + + EA D G D L S
Sbjct: 161 LEPFDMTLADIYAQRTGIDIDDIVKQMDAETWIGGREAVDKGWADAFLES 210
>gi|153932099|ref|YP_001384751.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397]
gi|152928143|gb|ABS33643.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397]
Length = 252
Score = 94.3 bits (233), Expect = 9e-18, Method: Composition-based stats.
Identities = 43/146 (29%), Positives = 77/146 (52%), Gaps = 4/146 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ +++YINSPGG V G AIY+ ++ K I+ G AAS+ S++ AG
Sbjct: 46 LDSLGDIDTLNIYINSPGGSVFQGQAIYNIIKRHKAKINIHVDGVAASIASVIAMAG--N 103
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
F N+ +++H P G A ++ + A D+ KI+ L E Y+ G + E +
Sbjct: 104 TIFMPKNSMMMIHNPWTFAYGNAKELRKQADDLDKIRESLIEAYLSKAGDKLSRETLIGI 163
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + ++A E D+G+ D+++ +
Sbjct: 164 MDNETWLTAQECYDYGLCDELVEEKE 189
>gi|310779736|ref|YP_003968068.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926]
gi|309749059|gb|ADO83720.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926]
Length = 361
Score = 94.3 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/164 (26%), Positives = 79/164 (48%), Gaps = 6/164 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D A C +L +EAE EI + INSPGG V AIY++++ + AA
Sbjct: 35 DVSANSFCRELEKIEAE----EILVRINSPGGDVFEAQAIYNSLKNHPAKVIVRIDALAA 90
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S +++ AG++ NA ++H P SG+A D + A+ + I+ + +Y
Sbjct: 91 SAATVIAMAGDE--ILMPENAIFMIHNPWSWSSGEAKDFRKKAETMDTIRETIVNVYASK 148
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ EE+ +D + +++ EA D G + ++L + + + +
Sbjct: 149 STLSREEIMNKMDEESWLTSQEAFDAGFITEILSLKAEDSDTEE 192
>gi|331004493|ref|ZP_08327963.1| Clp protease [Lachnospiraceae oral taxon 107 str. F0167]
gi|330410671|gb|EGG90094.1| Clp protease [Lachnospiraceae oral taxon 107 str. F0167]
Length = 201
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 61/184 (33%), Positives = 102/184 (55%), Gaps = 5/184 (2%)
Query: 25 QTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGG 84
+TN G + +R +R + + G I D +A ++L L E+ + I++ INS GG
Sbjct: 8 RTNCGISQVSLETRFFDKRCININGDITDILALDFTDKILELNLESDR-PITILINSLGG 66
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS--G 142
+ +G+ +YD + K PI C G+A SMG++L + + R+ LPN+ ++LHQP G
Sbjct: 67 EINSGLLMYDAIVGSKAPIRMVCRGRAYSMGAILFACANE--RYMLPNSELMLHQPILGG 124
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
+G AS I+ + +++ KR+LN + K+ GKT EE++ DH EA + + D
Sbjct: 125 NVAGNASSIKNISDSMLETKRKLNGLLSKHIGKTEEEIDIATSFDHYFLPDEAIGFNLCD 184
Query: 203 KVLM 206
KV+
Sbjct: 185 KVIN 188
>gi|161899389|ref|XP_001712921.1| Clp Protease copy 4 [Bigelowiella natans]
gi|75756415|gb|ABA27309.1| Clp Protease copy 4 [Bigelowiella natans]
Length = 183
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
LL++ I++++ +I+ + + +L+L+ +N + I+LYIN G + YD +
Sbjct: 9 LLEKNILYLSTEIDFNSTKSFISTILYLKNKNSNETINLYINGKGSSYYNLFSRYDQIIS 68
Query: 99 IKPPIS-------TFCMGQAASMGSLLLSAGEKGMRFALPNARILLH-QPSGGFSGQASD 150
+ I+ T +G A + L+ S G K R+ALP++ + + + S Q SD
Sbjct: 69 MHDIINSMKSKLSTLVLGIAFNEMCLISSYGSKDYRYALPSSLLYIDVFMNSIGSSQTSD 128
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
I ++ K + I+ K+ + E+ + R M++ EA ++G++DK++
Sbjct: 129 IGIKKSELYKFNNLIINIFSKHTMRHPTEITSYMTRPFHMTSVEALNYGIIDKII 183
>gi|296051584|ref|YP_003632258.1| peptidase S14 ClpP [Planctomyces limnophilus DSM 3776]
gi|296016821|gb|ADG70059.1| peptidase S14 ClpP [Planctomyces limnophilus DSM 3776]
Length = 179
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 2/146 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ E+ + INS GG V AIY ++ I G+A S S + AG+K
Sbjct: 10 SDVTEVVIRINSVGGYVGEASAIYQLLKEHPANIHVKIDGEAISCASWIAMAGDKITI-- 67
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
+ +++H PS SG A D+ + A+ + K + IY G E+V+K + +
Sbjct: 68 AEHGLMMVHDPSTWISGTADDLRKEAEVLDSYKEVIAGIYAARSGTDVEDVKKMMSDETW 127
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKS 215
M+A++A D G VD++ ++ E +
Sbjct: 128 MTATQAKDKGFVDEISANKSKPEATN 153
>gi|115351925|ref|YP_773764.1| peptidase S14, ClpP [Burkholderia ambifaria AMMD]
gi|115281913|gb|ABI87430.1| peptidase S14, ClpP [Burkholderia ambifaria AMMD]
Length = 361
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A QL A I + INS GG V AIY+ ++ + G AAS
Sbjct: 35 AQTFVTQLD--AAAANASTIVVAINSMGGDVFDAFAIYNALRRHAGKVKVRVDGVAASAA 92
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+ AG++ NA +++H +G+A D+ R A + + Y G+
Sbjct: 93 SLIAMAGDE--IVMPENALLMIHNAHTVTAGEAKDLRRIADLLDNAGDGILAAYAAKSGQ 150
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +E+ +D + ++A++A + G D +
Sbjct: 151 SIDEIRGMMDAETWLTAAQAKEKGFCDTI 179
>gi|297242697|ref|ZP_06926635.1| ATP-dependent Clp, protease subunit [Gardnerella vaginalis AMD]
gi|296888908|gb|EFH27642.1| ATP-dependent Clp, protease subunit [Gardnerella vaginalis AMD]
Length = 244
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I + I QL E I+++INSPGG A IY+ +
Sbjct: 21 ERTLFLNGTIAEESWFDDDITPQLFKDELNAGSGNITVWINSPGGDCVAAAQIYNMLMDY 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG K + P + +++H P G ++E+ +
Sbjct: 81 KGCVTVKIDGIAASAASVIAMAGTK--VYMSPVSMLMIHNPMTVAFGNRDEMEKAISMLD 138
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++K + Y G ++ +D + M A++A + G D VL R + +
Sbjct: 139 EVKESIINAYEIKTGLNRVKLSHLMDSETWMDANKAVELGFADGVLT-RGETAD 191
>gi|246880736|gb|ACS95048.1| ATP-dependent Clp protease proteolytic subunit [Dunaliella salina]
Length = 527
Score = 93.9 bits (232), Expect = 1e-17, Method: Composition-based stats.
Identities = 48/139 (34%), Positives = 79/139 (56%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E K++ + INS GG V G+ ++D +QFIK T +G AAS SL+L+ G G R+
Sbjct: 348 EEESKKVFVIINSFGGSVGNGITVHDALQFIKAGSLTLGLGVAASASSLVLAGGTIGERY 407
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
++HQP GQASDI +Q+I+KI+ + +IY + + ++ + LDRD
Sbjct: 408 VTEGCHTMIHQPESSLQGQASDIWIDSQEIMKIRLDVADIYSLSTYRPRHKILRDLDRDF 467
Query: 189 IMSASEACDWGVVDKVLMS 207
++A E +G+ D++ +
Sbjct: 468 YLNAPETISYGLADEIATN 486
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 16 LGL-VPMVVEQTNRGE----RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ + GE + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIY--SWGEELPAQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQKE 74
KE
Sbjct: 59 RSKE 62
>gi|167465665|ref|ZP_02330754.1| serine protease (phage related-protein, ClpP family) [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 238
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 8/166 (4%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I D + T + L+ I+LYINSPGG V G+AI++ ++ K
Sbjct: 11 IFIYGDIVTYQWDEVDTSATSFKEDLDRLGDLSTINLYINSPGGSVFEGIAIHNMLKRHK 70
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ AAS+ S++ AG+ + N+ +++H P G AS++ + A D+ +
Sbjct: 71 ANVHVHVDALAASIASVIAMAGD--TIYMPKNSMLMIHNPWIFAWGNASEMRKIADDLDR 128
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I ++Y++ G + E+++ LD + +SA EA ++G+ D V
Sbjct: 129 IGNSSKQVYLQKAGDKLSDEKLQDMLDAETWLSADEAFEYGLCDVV 174
>gi|312984199|ref|ZP_07791545.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Lactobacillus crispatus CTV-05]
gi|310894418|gb|EFQ43494.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Lactobacillus crispatus CTV-05]
Length = 236
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/179 (25%), Positives = 78/179 (43%), Gaps = 16/179 (8%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
DIYS F+ ++ QL + ++I+L INSPGG + AG +Y
Sbjct: 17 DIYS--------FLGYEVTSPN------QLNEALSNANGQDITLEINSPGGYIDAGSEMY 62
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
++ ++ +GQA S S + A +K P A++++H+ SGG G D
Sbjct: 63 TALKKYPGNVTAQVVGQACSAASWIALAADKVEM--SPTAQMMIHRVSGGVEGNVDDFAS 120
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
Q + + + ++Y K G +EV + + M+A +A D G D ++
Sbjct: 121 AMQSLDSMDQAYVDLYSKRTGLDKQEVYRMMCETTWMNAKQAVDKGFADSIMFENDQAP 179
>gi|328910857|gb|AEB62453.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp
[Bacillus amyloliquefaciens LL3]
Length = 240
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
VF+ G++ D + T + L+ ++++INSPGG V G+AI ++
Sbjct: 23 VFIFGEVVTSGYEWDEIDTSAASFKQDLDLLGDMSVLNVHINSPGGSVFEGVAICSMLKQ 82
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ + G AAS+ S++ AG+ F NA +++H P G A+++ + A +
Sbjct: 83 HKAFVNVYIDGLAASIASVIAMAGDA--IFMPSNAMMMVHNPWTIAMGNANEMRKQADVL 140
Query: 159 VKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
KI + Y++ G T E ++ +D + +SASEA +G+ D++
Sbjct: 141 DKISESMKASYLEKAGDKLTKETLDSLMDNETWLSASEAVSYGLADEI 188
>gi|298253816|ref|ZP_06977405.1| ATP-dependent Clp, protease subunit [Gardnerella vaginalis 5-1]
gi|297532152|gb|EFH71125.1| ATP-dependent Clp, protease subunit [Gardnerella vaginalis 5-1]
Length = 244
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 5/174 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER +F+ G I + I QL E I+++INSPGG A IY+ +
Sbjct: 21 ERTLFLNGTIAEESWFDDDITPQLFKDELNAGSGNITVWINSPGGDCVAAAQIYNMLMDY 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG K + P + +++H P G ++E+ +
Sbjct: 81 KGCVTVKIDGIAASAASVIAMAGTK--VYMSPVSMLMIHNPMTVAFGNRDEMEKAISMLD 138
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
++K + Y G ++ +D + M A++A + G D VL R + +
Sbjct: 139 EVKESIINAYEIKTGLNRVKLSHLMDSETWMDANKAVELGFADGVLT-RGETAD 191
>gi|224584460|ref|YP_002638258.1| Clp protease-like protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|224468987|gb|ACN46817.1| Clp protease-like protein [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
Length = 684
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 52 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 111 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 169
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 170 KETWMSGAECVSEGFADKLI 189
>gi|167993401|ref|ZP_02574495.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|194443858|ref|YP_002040235.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|198242377|ref|YP_002215244.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|194402521|gb|ACF62743.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|197936893|gb|ACH74226.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205328541|gb|EDZ15305.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|261246251|emb|CBG24056.1| Clp-like protease [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|312912023|dbj|BAJ35997.1| ATP-dependent Clp protease [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|321223646|gb|EFX48709.1| Prophage Clp protease-like protein [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|326622990|gb|EGE29335.1| Clp protease-like protein [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 684
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 52 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 111 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 169
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 170 KETWMSGAECVSEGFADKLI 189
>gi|169257302|ref|YP_001700678.1| bacteriophage Clp protease involved in capsid processing [Phage
Gifsy-2]
Length = 696
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 64 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 123 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 181
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 182 KETWMSGAECVSEGFADKLI 201
>gi|168243819|ref|ZP_02668751.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|194448205|ref|YP_002045037.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|194406509|gb|ACF66728.1| ATP-dependent protease [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|205337092|gb|EDZ23856.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
Length = 683
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 52 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 111 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 169
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 170 KETWMSGAECVSEGFADKLI 189
>gi|163800611|ref|ZP_02194512.1| putative protease/scaffold protein [Vibrio sp. AND4]
gi|159176054|gb|EDP60848.1| putative protease/scaffold protein [Vibrio sp. AND4]
Length = 670
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 82/164 (50%), Gaps = 8/164 (4%)
Query: 45 VFVTGQIE--DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V+V G I D AT I A L + KE+ L + S GG V G+A+Y+ ++ K
Sbjct: 20 VWVHGDISAYDIDATEIIAALQVAD----GKEVELRMLSGGGSVYQGLAMYNALKAHKGK 75
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ G AAS+ + +L A + NA +++H PS G G +I Q +
Sbjct: 76 VVGIVDGMAASIATYVLLACD--SIRMPENAMLMIHNPSIGAWGGEKEINSALQQLQAAT 133
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ ++E YV+ G+ E+V ++ + +A A DWG+VD+V+
Sbjct: 134 KTISEAYVEKSGQPLEDVLTAMESETWFTAQAAKDWGLVDEVVE 177
>gi|313111246|ref|ZP_07797064.1| ClpP protease [Pseudomonas aeruginosa 39016]
gi|310883566|gb|EFQ42160.1| ClpP protease [Pseudomonas aeruginosa 39016]
Length = 296
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLL--FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ + + I + + A+ + L + ++ + INSPGG V G+AIY+ ++
Sbjct: 43 DTTITIYEPIGYDWWTGEGVTAKRIAGVLRSIGNDVDVIVNINSPGGDVFEGLAIYNLLR 102
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K ++ +G AAS S + AG++ A +++H G +D+ A
Sbjct: 103 EHKGKVTVNIIGLAASAASFIAMAGDEIRI--GRAAFLMIHNAWLIAMGNRNDLREIADW 160
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ L +IY + G +++ K ++ + + EA D G D L S
Sbjct: 161 LEPFDMTLADIYAQRTGIDLDDIVKQMNAETWIGGREAVDKGWADAFLES 210
>gi|16764393|ref|NP_460008.1| Clp protease-like protein [Phage Gifsy-2]
gi|16419547|gb|AAL19967.1| Gifsy-2 prophage Clp protease-like protein [Phage Gifsy-2]
gi|267992782|gb|ACY87667.1| Clp protease-like protein [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157578|emb|CBW17068.1| ATP Dependent clp Protease [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
Length = 693
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 61 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 119
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 120 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 178
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 179 KETWMSGAECVSEGFADKLI 198
>gi|167630902|ref|YP_001681401.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
gi|167593642|gb|ABZ85390.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
Length = 254
Score = 93.5 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ G I + + + E + + +I+++INSPGG V A IY+ +
Sbjct: 36 SRTLYLDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDVFAASQIYNMLMDY 95
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG G P + I++H P+ G ++E+ +
Sbjct: 96 KGKVTVKIDGIAASAASVIAMAG--GDVLMSPVSMIMIHNPATIAIGDTEEMEKAIAMLE 153
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ +D + +A +A + G D +L
Sbjct: 154 EIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 199
>gi|310778837|ref|YP_003967170.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926]
gi|309748160|gb|ADO82822.1| peptidase S14 ClpP [Ilyobacter polytropus DSM 2926]
Length = 360
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 11/167 (6%)
Query: 47 VTGQIE-----DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI-- 99
+ G+I D LE + I+L INSPGG VT AIY+ ++
Sbjct: 22 IYGEITKFSWWDETVVTASDFARELEELKDTESINLCINSPGGSVTEAHAIYNMLKRYAK 81
Query: 100 --KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+T+ G AAS S + AG++ A +++H +GG G++ D+ + A
Sbjct: 82 ANNVKITTYIDGVAASAASYIAMAGDEICMGLG--ASLMIHNVNGGAWGESKDLRKTADL 139
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K+K + +IYV + E + ++ + M+ EA ++G +DK+
Sbjct: 140 MDKLKENIIDIYVTQSNLSREVISNLMNEETWMTPEEALEYGFIDKI 186
>gi|148727186|ref|YP_001285678.1| p08 [Xanthomonas phage Xop411]
gi|116583486|gb|ABK00156.1| p08 [Xanthomonas phage Xop411]
Length = 245
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 42/187 (22%), Positives = 84/187 (44%), Gaps = 12/187 (6%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
R R +I+S + ++ + D + LEA P ++++ I+SPGG +
Sbjct: 38 RDGREINIFSVIGRD-------DLNDGTTSAQIGSF--LEAMGPG-DVTVNIDSPGGDMF 87
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AG+AIY+ + + ++ +G+AAS S++ +G++ A +++H G
Sbjct: 88 AGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSGDQINMHTS--AFLMIHNCHLVIGGN 145
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A ++ A + + +IYV + + V + +D + M+A EA G D ++
Sbjct: 146 AKELMSVAAMMRPFDSAMADIYVARSSQAKDTVVQMMDNETWMNAEEAVKMGFADSIVTP 205
Query: 208 RIDIEEK 214
K
Sbjct: 206 AAKQPAK 212
>gi|167461037|ref|ZP_02326126.1| serine protease (phage related-protein, ClpP family) [Paenibacillus
larvae subsp. larvae BRL-230010]
Length = 238
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 87/166 (52%), Gaps = 8/166 (4%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I D + T + L+ I+LYINSPGG V G+AI++ ++ K
Sbjct: 11 IFIYGDIVTYQWDEVDTSAASFKEDLDRLGDLSTINLYINSPGGSVFEGIAIHNMLKRHK 70
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ + AAS+ S++ AG+ + N+ +++H P G AS++ + A D+ +
Sbjct: 71 ANVHVYVDALAASIASVIAMAGD--TIYMPKNSMLMIHNPWIFAWGNASEMRKIADDLDR 128
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I + Y++ G + E++++ LD + +SA EA ++G+ D V
Sbjct: 129 IGNSSKQTYLQKAGDKLSDEKLQEMLDAETWLSADEAFEYGLCDVV 174
>gi|52079942|ref|YP_078733.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis ATCC 14580]
gi|52785314|ref|YP_091143.1| hypothetical protein BLi01550 [Bacillus licheniformis ATCC 14580]
gi|52003153|gb|AAU23095.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis ATCC 14580]
gi|52347816|gb|AAU40450.1| putative protein [Bacillus licheniformis ATCC 14580]
Length = 248
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 40/166 (24%), Positives = 81/166 (48%), Gaps = 8/166 (4%)
Query: 45 VFVTGQIEDHM--ATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+++ +I + Q L+ +++YINSPGG V G +IY+ ++ K
Sbjct: 22 IYIYSEISSAQFWGDEVTTQTFKEDLDGLGEVSALNIYINSPGGSVFEGNSIYNIIKRHK 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ + G AAS+ S++ +G+ F NA +++H P G A ++ + A D+ +
Sbjct: 82 AHVNVYVDGLAASIASVIAMSGDA--IFMPANAMMMIHNPWTVAQGNAEELRKQADDMDR 139
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I+ L E Y+ G + + + +D + ++A E + G+ D +
Sbjct: 140 IRESLIEAYLGKAGEKLNRDRLIELMDAETWLTAQECLELGLCDSI 185
>gi|205352451|ref|YP_002226252.1| ATP dependent Clp protease [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205272232|emb|CAR37094.1| ATP Dependent clp Protease [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|326627504|gb|EGE33847.1| ATP Dependent clp Protease [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 709
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 77 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 135
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 136 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 194
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 195 KETWMSGAECVSEGFADKLI 214
>gi|323129300|gb|ADX16730.1| bacteriophage Clp protease involved in capsid processing
[Salmonella enterica subsp. enterica serovar Typhimurium
str. 4/74]
Length = 709
Score = 93.2 bits (230), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 77 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 135
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GKT E++ L
Sbjct: 136 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKTPEDIAAMLA 194
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 195 KETWMSGAECVSEGFADKLI 214
>gi|330430960|gb|AEC22293.1| peptidase S14 [Pusillimonas sp. T7-7]
Length = 240
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 60/132 (45%), Gaps = 2/132 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L I+SPGG V A A+ + K + G AAS + + A ++ A
Sbjct: 61 IHLRIDSPGGDVFAARAMMTAISQHKAKVIAHVDGLAASAATGICMACDEVEITQG--AG 118
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++H G +D+ + ++ + KI L++ Y K G+ E++ +D + +A E
Sbjct: 119 FMIHNAWTIAIGNKADMGKTSELLGKIDAGLSDDYAKRTGQKSEQITSWMDEETWFTADE 178
Query: 195 ACDWGVVDKVLM 206
A + G D+ +
Sbjct: 179 AVEHGFADRAVE 190
>gi|86136200|ref|ZP_01054779.1| putative protease/scaffold protein [Roseobacter sp. MED193]
gi|85827074|gb|EAQ47270.1| putative protease/scaffold protein [Roseobacter sp. MED193]
Length = 326
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 7/164 (4%)
Query: 48 TGQI---EDHMATLICAQ--LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
++ ++ A + A+ L L I L +NSPGG V +AIY+ ++
Sbjct: 13 GTEVLIYDEIGAYGVTAKGFLAELGVLPEDAAIDLRLNSPGGSVFDAVAIYNALKRHAGE 72
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AAS S + AG+ NA +++H PSG G A D+ A+ + K+K
Sbjct: 73 ITVWIDGIAASAASYIAMAGDA--IVMPENAFLMIHDPSGLVMGTAEDMRATAEALDKVK 130
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
L + Y GK +E+ + + + A +A D G +D++
Sbjct: 131 GSLIQGYAGKSGKPDDEIAALMAAETWLDAKDALDLGFIDRIAE 174
>gi|125974224|ref|YP_001038134.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405]
gi|125714449|gb|ABN52941.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405]
Length = 247
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+++INS GG V A IY ++ K + G A S S++ AG++ P +
Sbjct: 56 DINVWINSYGGDVYAASRIYTGLKEHKGKVKVKIDGVAISAASVIAMAGDE--ILMSPTS 113
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
I+LH P G F G+A D+ A + ++K + Y GK+ ++ + +D + MSA
Sbjct: 114 IIMLHNPWGTFQGEAKDLRHGADVLDEVKETIINAYQLKTGKSRAKISQMMDEETWMSAK 173
Query: 194 EACDWGVVDKVLMSRIDIE 212
+A G D +L + E
Sbjct: 174 KAVAEGFADGMLYEKNKEE 192
>gi|330433345|gb|AEC18404.1| ATP-dependent Clp protease proteolytic subunit [Gallibacterium
anatis UMN179]
Length = 654
Score = 92.8 bits (229), Expect = 3e-17, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 83/161 (51%), Gaps = 7/161 (4%)
Query: 45 VFVTGQIEDHMATLICAQ--LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
VF+ +I + AQ L+ ++I+L+I+SPGG V G+AIY+ ++
Sbjct: 17 VFIYDEIGFW---GVSAQQFANELKEIGNVRQINLHIHSPGGDVFDGIAIYNLLKNHPAN 73
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ AG++ NA +++H+P G G A ++ ++A + K++
Sbjct: 74 KTVYIDGLAASMASVIAMAGDE--VIMPENAMLMIHKPWGIQGGDAEELRKYADLLDKVE 131
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L Y+ GK+ +E+ L + ++ E + G DK
Sbjct: 132 STLLMAYIAKTGKSEDELAAMLAVETWLTGKECVELGFADK 172
>gi|206975220|ref|ZP_03236134.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus
H3081.97]
gi|206746641|gb|EDZ58034.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus
H3081.97]
Length = 251
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 23 VFIYGEITKYAWEEYGEVSSITFKNELDEL--GDDIETINLYINSPGGSVFETMAIIAML 80
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + + ++ G AS S+L +K + +A N+ +++H SG A+ + + A
Sbjct: 81 QRHQAKVISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNANQLRKAAD 138
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA ++G+ D+++
Sbjct: 139 DIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMNYGLCDEIIS 190
>gi|121603870|ref|YP_981199.1| peptidase S14, ClpP [Polaromonas naphthalenivorans CJ2]
gi|120592839|gb|ABM36278.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 641
Score = 92.4 bits (228), Expect = 3e-17, Method: Composition-based stats.
Identities = 35/163 (21%), Positives = 74/163 (45%), Gaps = 6/163 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ + +I + L + + + INS GG V+ +AIY+ ++ K ++
Sbjct: 6 ISIFSEIGSVVTAENIR--SQLSYIDDATPLIVEINSEGGSVSEAVAIYNLLRTWKGGVT 63
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+G A S +++ AG++ A + I++H P SG A + +A + ++
Sbjct: 64 VEIVGWALSAATVIAMAGQRIKAHAT--SLIMVHAPWTNASGNAGAMRENAALLDQVALT 121
Query: 165 LNEIYVKNCGKTYEEVEKTLD-RDHIMSASEACDWGVVDKVLM 206
+ Y + + + +D +DH +A EA G+VD+++
Sbjct: 122 MQAAYA-RTRQPAKTLAAWMDGQDHWFTAQEALALGLVDEIIS 163
>gi|260889396|ref|ZP_05900659.1| putative prophage L54a, Clp protease [Leptotrichia hofstadii F0254]
gi|260860807|gb|EEX75307.1| putative prophage L54a, Clp protease [Leptotrichia hofstadii F0254]
Length = 260
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 77/154 (50%), Gaps = 4/154 (2%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D ++ + Q +E + I+LYINSPGG V + +AI +T++ K ++ G AA
Sbjct: 34 DDVSDKVFKQ--DIENLGDVENITLYINSPGGSVFSAVAIANTLKNHKAKVTANIDGLAA 91
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S +++ SA + NA ++H P G ++++ + + K+K + E Y+
Sbjct: 92 SAATIITSACDTVRM--PKNALFMIHNPITFAYGNNQEMQKTVEMLNKVKNSIIETYLNK 149
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
E + + +D + M A A ++G VD+++
Sbjct: 150 AKTDKETLSELMDNETWMDAETAKEYGFVDEIVN 183
>gi|228987450|ref|ZP_04147569.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228772182|gb|EEM20629.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 240
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 12 VFIYGEITKYAWEEYGEVSSITFKNELDEL--GDDIETINLYINSPGGSVFETMAIIAML 69
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + + ++ G AS S+L +K + +A N+ +++H SG A+ + + A
Sbjct: 70 QRHQAKVISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNANQLRKAAD 127
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA ++G+ D+++
Sbjct: 128 DIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMNYGLCDEIIS 179
>gi|225573279|ref|ZP_03782034.1| hypothetical protein RUMHYD_01470 [Blautia hydrogenotrophica DSM
10507]
gi|225039411|gb|EEG49657.1| hypothetical protein RUMHYD_01470 [Blautia hydrogenotrophica DSM
10507]
Length = 223
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 47 VTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ G I + + QL E +I+++INSPGG A IY+ + ++
Sbjct: 1 MNGTIAEESWFDDDVTPQLFKEELMAGSGDITVWINSPGGDCVAAAQIYNMLMDYPHNVT 60
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS S++ AG + P + +++H P G +++++ + + +K
Sbjct: 61 VKIDGIAASAASVIAMAGTR--VLVSPVSMMMIHNPMTVAMGDTAEMQKAIEMLGSVKDS 118
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ Y G + ++ +D + M A +A + G D VL SR +I E +
Sbjct: 119 IINAYEIKTGLSRAKLSHLMDAETWMDAGKAVELGFADGVL-SRAEIPEDIE 169
>gi|85001017|ref|XP_955227.1| ATP-dependent Clp protease proteolytic subunit [Theileria annulata
strain Ankara]
gi|65303373|emb|CAI75751.1| ATP-dependent Clp protease proteolytic subunit, putative [Theileria
annulata]
Length = 261
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/166 (28%), Positives = 88/166 (53%), Gaps = 10/166 (6%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPG---------GVVTAGMAIYDTMQFIKPP 102
+A L+ +QLL+L+ ++ K I +YINS + I D M ++K
Sbjct: 94 NSGVAHLVISQLLYLDYDSQDKPIKIYINSDNERSNEDGISTSEIDALNIVDVMNYLKNE 153
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKI 161
+ T +G+A +L+L++G G R+ LP + LL Q QA DI ++++I+K
Sbjct: 154 VITINLGKAYGPAALILASGTPGKRYVLPRSYTLLRQSPTTLSFRQAEDIAIYSREILKA 213
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+R + +++ K C K+ EE+ + ++ M + E ++G+ DK+L +
Sbjct: 214 RRSVIKVFSKACNKSEEEILEKINVGDYMGSQETVNFGLADKILEN 259
>gi|217959640|ref|YP_002338192.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus
AH187]
gi|217067295|gb|ACJ81545.1| prophage LambdaBa02, Clp protease family protein [Bacillus cereus
AH187]
Length = 251
Score = 92.4 bits (228), Expect = 4e-17, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 87/172 (50%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 23 VFIYGEITKYAWEEYGEVSSITFKNELDEL--GDDIETINLYINSPGGSVFETMAIIAML 80
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + + ++ G AS S+L +K + +A N+ +++H SG A+ + + A
Sbjct: 81 QRHQAKVISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNANQLRKAAD 138
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA ++G+ D+++
Sbjct: 139 DIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMNYGLCDEIIS 190
>gi|126207994|ref|YP_001053219.1| putative Clp-like protease [Actinobacillus pleuropneumoniae L20]
gi|190149760|ref|YP_001968285.1| Clp-like protease [Actinobacillus pleuropneumoniae serovar 7 str.
AP76]
gi|126096786|gb|ABN73614.1| putative Clp-like protease [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|189914891|gb|ACE61143.1| putative Clp-like protease [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
Length = 674
Score = 92.0 bits (227), Expect = 4e-17, Method: Composition-based stats.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A L L N K+I+L+I+SPGG V G+AIY+ ++
Sbjct: 38 ISIYDEIGFWGVTAQQFANDLKALG--NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPAN 95
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ AG + NA +++H+P G G A D+ ++A + K++
Sbjct: 96 KTVYIDGLAASMASVIAMAGNE--IIMPENAMMMIHKPWGIQGGDADDMRKYADLLDKVE 153
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L YV K+ EE+ + L + ++ E + G DK
Sbjct: 154 STLIMAYVAKTEKSEEELAEMLKEETWLTGKECVEQGFADK 194
>gi|237717659|ref|ZP_04548140.1| clp protease [Bacteroides sp. 2_2_4]
gi|229453061|gb|EEO58852.1| clp protease [Bacteroides sp. 2_2_4]
Length = 350
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 56/174 (32%), Positives = 95/174 (54%), Gaps = 7/174 (4%)
Query: 45 VFVTGQIE--DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G+I D + + A+ L EAE+ ++I + INS GG + GMAI++ +
Sbjct: 28 ILLYGEIGEYDRVRSGDIARELI-EAESASRQIDVRINSIGGDIFTGMAIFNAFRQSAAD 86
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASMGS++ + G+ AR+++H PSGG G A ++E A + ++
Sbjct: 87 ITIYIDGVAASMGSVIAACGKPVKM--SRYARLMVHSPSGGAYGNAGEMEETAGMLKSLE 144
Query: 163 RRLNEIYVKNCGKTYEEVE-KTLD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L EIY C KT EE+ + D +DH +A +A + G+VD++ + E+
Sbjct: 145 DTLCEIYAARCKKTKEEIRSEWFDGKDHWFTARQAVELGLVDEIYDADPVPEDS 198
>gi|229096954|ref|ZP_04227923.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228686564|gb|EEL40473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
Length = 239
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 12 VFIYGEITKYAWEEYGEVSSITFKNELDELG--DGIETINLYINSPGGSVFETMAIIAML 69
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + ++ G AS S+L +K + +A N+ +++H SG A + + A
Sbjct: 70 QRHPAKVISYIDGIGASCASVLPMISDKIIMYA--NSMLMVHNAWTYASGNADQLRKAAD 127
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA ++G+ D+++
Sbjct: 128 DIERINQSMVQHYLTRAGDKLDEDILKQLLDAETWLSADEAMEYGLCDEIIS 179
>gi|84662599|ref|YP_453564.1| ClpP family protein [Xanthomonas phage OP1]
gi|84570648|dbj|BAE72711.1| ClpP family protein [Xanthomonas oryzae phage OP1]
Length = 245
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 41/179 (22%), Positives = 83/179 (46%), Gaps = 12/179 (6%)
Query: 28 RGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVT 87
R R +I+S + ++ + D + LEA P ++++ I+SPGG +
Sbjct: 38 RDGREINIFSVIGRD-------DLNDGTTSAQIGSF--LEAMGPG-DVTVNIDSPGGDMF 87
Query: 88 AGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ 147
AG+AIY+ + + ++ +G+AAS S++ +G++ A +++H G
Sbjct: 88 AGLAIYNQLIAHQGKVTVNVVGRAASAASVIAMSGDQINMHTS--AFLMIHNCHLVIGGN 145
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
A ++ A + + +IYV + + V + +D + M+A EA G D ++
Sbjct: 146 AKELMSVAAMMEPFDSAMADIYVARSSQAKDTVVQMMDNETWMNAEEAVKMGFADSIVT 204
>gi|281418279|ref|ZP_06249299.1| peptidase S14 ClpP [Clostridium thermocellum JW20]
gi|281409681|gb|EFB39939.1| peptidase S14 ClpP [Clostridium thermocellum JW20]
Length = 241
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ G I + + + E + + +I+++INSPGG + A IY+ +
Sbjct: 23 SRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDIFAANQIYNMLMDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG G F P + +++H P G ++E+ +
Sbjct: 83 KGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPMTIAIGDTEEMEKAIAMLE 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ +D + +A +A + G D +L
Sbjct: 141 EIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 186
>gi|304316281|ref|YP_003851426.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302777783|gb|ADL68342.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 242
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ G I + + + E + + +I+++INSPGG + A IY+ +
Sbjct: 23 SRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDIFAANQIYNMLMDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG G F P + +++H P G ++E+ +
Sbjct: 83 KGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPMTIAIGDTEEMEKAIAMLE 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ +D + +A +A + G D +L
Sbjct: 141 EIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 186
>gi|256003556|ref|ZP_05428546.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360]
gi|255992580|gb|EEU02672.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360]
gi|316941379|gb|ADU75413.1| peptidase S14 ClpP [Clostridium thermocellum DSM 1313]
Length = 241
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ G I + + + E + + +I+++INSPGG + A IY+ +
Sbjct: 23 SRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDIFAANQIYNMLMDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG G F P + +++H P G ++E+ +
Sbjct: 83 KGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPMTIAIGDTEEMEKAIAMLE 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ +D + +A +A + G D +L
Sbjct: 141 EIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 186
>gi|308172739|ref|YP_003919444.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp
[Bacillus amyloliquefaciens DSM 7]
gi|307605603|emb|CBI41974.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp
[Bacillus amyloliquefaciens DSM 7]
Length = 240
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/168 (27%), Positives = 86/168 (51%), Gaps = 10/168 (5%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
VF+ G++ D + T + L+ ++++INSPGG V G+AI ++
Sbjct: 23 VFILGEVVTSGYEWDEIDTSAASFKQDLDLLGDMSVLNVHINSPGGSVFEGVAICSMLKQ 82
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ + G AAS+ S++ AG+ F NA +++H P G A+++ + A +
Sbjct: 83 HKAFVNVYIDGLAASIASVIAMAGDA--IFMPSNAMMMVHNPWTIAMGNANEMRKQADVL 140
Query: 159 VKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
KI + Y++ G T E ++ +D + +SASEA +G+ D++
Sbjct: 141 DKISESMKASYLEKAGDKLTKETLDSLMDNETWLSASEAVSYGLADEI 188
>gi|229104552|ref|ZP_04235218.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228678888|gb|EEL33099.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
Length = 239
Score = 92.0 bits (227), Expect = 5e-17, Method: Composition-based stats.
Identities = 47/172 (27%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L N + I+LYINSPGG V MAI +
Sbjct: 12 VFIYGEITKYAWEEYGEVSSITFKNELDELG--NGIETINLYINSPGGSVFETMAIIAML 69
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + ++ G AS S+L +K + +A N+ +++H SG A + + A
Sbjct: 70 QRHPAKVISYIDGIGASCASVLPMISDKIIMYA--NSMLMVHNAWTYASGNADQLRKAAD 127
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA ++G+ D+++
Sbjct: 128 DIERINKSMVQHYLTRAGDKLDEDILKQLLDAETWLSADEAMEYGLCDEIIS 179
>gi|120599284|ref|YP_963858.1| peptidase S14, ClpP [Shewanella sp. W3-18-1]
gi|120559377|gb|ABM25304.1| peptidase S14, ClpP [Shewanella sp. W3-18-1]
Length = 284
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + +K++++YINSPGG + G+AIY+ ++ K ++T +G AAS S++ AGE
Sbjct: 63 LRSIGNEKDVTVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDD 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF +A +++H G + A D+ + + ++YV+ CG++ + + +D
Sbjct: 123 ARFVASSAFLMIHNCWVFAIGNRHALRNIADDMEEFDAAMVDLYVEGCGQSEKVIATMMD 182
Query: 186 RDHIMSASEACDWGV------VDKV 204
+ + +A + G D++
Sbjct: 183 EETFIRGKKAVELGFAADTLSADEI 207
>gi|146308985|ref|YP_001189450.1| peptidase S14, ClpP [Pseudomonas mendocina ymp]
gi|145577186|gb|ABP86718.1| peptidase S14, ClpP [Pseudomonas mendocina ymp]
Length = 216
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 45 VFVTGQIEDHM---ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+F+ I D A + L L+ ++++L INSPGG V G A+ + K
Sbjct: 10 IFLYDAIGDWYGIGAEQVAQALRDLQ----GRDVALRINSPGGDVFDGRAMATAISQHKG 65
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
++ + G AAS + + A ++ A ++H G A D A + K+
Sbjct: 66 KVTAYIDGLAASAATYVALAADEVEIAGG--AFFMIHNAWTLNMGNADDFRETASLLDKV 123
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ Y++ + E+V + + SA EA + G VD++ S+
Sbjct: 124 DDSIVADYIRKTSQADEQVRAWMKAETWFSAEEAVEHGFVDRLSQSKK 171
>gi|125974136|ref|YP_001038046.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405]
gi|125714361|gb|ABN52853.1| peptidase S14, ClpP [Clostridium thermocellum ATCC 27405]
Length = 242
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 39/166 (23%), Positives = 77/166 (46%), Gaps = 4/166 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R +++ G I + + + E + + +I+++INSPGG + A IY+ +
Sbjct: 23 SRTLYIDGPIAEESWLGDEVTPKQFKSELLSGEGDITIWINSPGGDIFAANQIYNMLMDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
K ++ G AAS S++ AG G F P + +++H P G ++E+ +
Sbjct: 83 KGKVTVKIDGIAASAASVIAMAG--GDVFMSPVSMMMIHNPMTIAIGDTEEMEKAIAMLE 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+IK + Y G + ++ +D + +A +A + G D +L
Sbjct: 141 EIKESIINAYELKTGLSRAKISHLMDAESWFNARKAVELGFADGIL 186
>gi|163119655|ref|YP_080707.2| ATP-dependent protease proteolytic subunit [Bacillus licheniformis
ATCC 14580]
gi|145903165|gb|AAU25069.2| ATP-dependent protease proteolytic subunit (class III heat-shock
protein) [Bacillus licheniformis ATCC 14580]
Length = 230
Score = 91.6 bits (226), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ I LYINSPGG V G AI+ +Q K I+ + A S+ S++ AG+K
Sbjct: 35 LKSLGDVSSIDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAGDK- 93
Query: 126 MRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE--EVEK 182
+P NA +++H P G G A++ + A D+ KI + Y+ G + + +
Sbjct: 94 --ITMPSNAMMMIHNPYMGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLDDGTLRQ 151
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
LD + ++A EA ++G++D+V S+
Sbjct: 152 LLDEETWLTADEALNYGLIDEVSESKD 178
>gi|24374490|ref|NP_718533.1| ClpP protease family protein [Shewanella oneidensis MR-1]
gi|24349072|gb|AAN55977.1|AE015735_11 ClpP protease family protein [Shewanella oneidensis MR-1]
Length = 284
Score = 91.6 bits (226), Expect = 7e-17, Method: Composition-based stats.
Identities = 38/145 (26%), Positives = 76/145 (52%), Gaps = 6/145 (4%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + +K++++YINSPGG + G+AIY+ ++ K ++T +G AAS S++ AGE
Sbjct: 63 LRSIGNEKDVTVYINSPGGDMFEGIAIYNRLREHKGKVTTKVLGLAASAASVIYMAGEDD 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF +A +++H G + A D+ + + ++YV+ CG++ + + +D
Sbjct: 123 ARFVASSAFLMIHNCWVFAIGNRHALRNIADDMEEFDAAMVDLYVEGCGQSEKVIATMMD 182
Query: 186 RDHIMSASEACDWGV------VDKV 204
+ + +A + G D++
Sbjct: 183 EETFIRGKKAVELGFAADTLSADEI 207
>gi|239815455|ref|YP_002944365.1| peptidase S14 ClpP [Variovorax paradoxus S110]
gi|239802032|gb|ACS19099.1| peptidase S14 ClpP [Variovorax paradoxus S110]
Length = 227
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 2/125 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG V G+AIY+ ++ G AAS+ S++ AG++ A N I+
Sbjct: 49 IYINSPGGSVFEGLAIYNQIKRFDGEKIVHVDGIAASIASVIAMAGDEVRIAA--NGTIM 106
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H P G G A+D+ + A+ + K++ L E YV G E++ + + M+A EA
Sbjct: 107 IHDPWGMAMGTAADMRKQAESLDKVRDVLLENYVARTGGKREDISSWMTAETWMNADEAV 166
Query: 197 DWGVV 201
+ G
Sbjct: 167 ERGFA 171
>gi|167746043|ref|ZP_02418170.1| hypothetical protein ANACAC_00738 [Anaerostipes caccae DSM 14662]
gi|167654558|gb|EDR98687.1| hypothetical protein ANACAC_00738 [Anaerostipes caccae DSM 14662]
Length = 222
Score = 91.2 bits (225), Expect = 8e-17, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 4/165 (2%)
Query: 45 VFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+F+ G I + + QL E +I+++INSPGG A IY+ + K
Sbjct: 1 MFLNGTIAEESWFDDDVTPQLFRDELNAGSGDITVWINSPGGDCIAAAQIYNMLMEYKGN 60
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ G AAS S++ AG K P + +++H PS G G + +++ + + ++K
Sbjct: 61 VIVKIDGIAASAASVIAMAGTKVCV--SPVSMLMIHNPSAGIYGNTAVMQKAIEMLDEVK 118
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ Y G + ++ +D + M A+ A + G D++L
Sbjct: 119 ESIVNAYEIKTGMSRAKISHLMDAETWMDANSAVEMGFADEILQR 163
>gi|52787302|ref|YP_093131.1| hypothetical protein BLi03615 [Bacillus licheniformis ATCC 14580]
gi|52349804|gb|AAU42438.1| ClpP [Bacillus licheniformis ATCC 14580]
Length = 243
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/147 (31%), Positives = 78/147 (53%), Gaps = 6/147 (4%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ I LYINSPGG V G AI+ +Q K I+ + A S+ S++ AG+K
Sbjct: 48 LKSLGDVSSIDLYINSPGGDVFEGQAIHSMLQRHKAKINVYVDALAGSIASVIAMAGDK- 106
Query: 126 MRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYE--EVEK 182
+P NA +++H P G G A++ + A D+ KI + Y+ G + + +
Sbjct: 107 --ITMPSNAMMMIHNPYMGMVGNAAEFRKAADDLDKITESIVSTYLAKAGDKLDDGTLRQ 164
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRI 209
LD + ++A EA ++G++D+V S+
Sbjct: 165 LLDEETWLTADEALNYGLIDEVSESKD 191
>gi|220931198|ref|YP_002508106.1| peptidase S14 ClpP [Halothermothrix orenii H 168]
gi|219992508|gb|ACL69111.1| peptidase S14 ClpP [Halothermothrix orenii H 168]
Length = 234
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 85/182 (46%), Gaps = 13/182 (7%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+++ G I ED + ++ + +I +++NS GG + +AI++ +
Sbjct: 20 IYLHGPIRNPLPDEDEEDVITLKEVRNKLNKITADKIIVHLNSTGGDLFQSVAIHNLFKD 79
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K I G AAS GS++L AG+K + PN+ +++H G A A+ +
Sbjct: 80 HKAEIIMINDGIAASGGSIILMAGDKIKFY--PNSIMMIHAAHTITYGDAKYHREVARKL 137
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL-----MSRIDIEE 213
KI + L E Y + +E+EK + + ++A EA + G D+++ SR + +
Sbjct: 138 DKIDKSLKENYSQRFTGAEKELEKLIQEETWLTAKEAKEKGFCDEIISDNTEESRAENKS 197
Query: 214 KS 215
+
Sbjct: 198 NN 199
>gi|46579912|ref|YP_010720.1| ClpP protease family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449328|gb|AAS95979.1| ClpP protease family protein [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234088|gb|ADP86942.1| peptidase S14 ClpP [Desulfovibrio vulgaris RCH1]
Length = 244
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 12/178 (6%)
Query: 41 KERIVFVTGQI--EDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+E +++ I +D+ A +L + A I L INSPGG V A +
Sbjct: 27 EEATIYLYDVIVTDDYWGGVSAEAFVRELNAITA----STIHLRINSPGGEVFAARCMEA 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++ + G AAS S + A + P A +++H+ +G + D+ +
Sbjct: 83 AIKGHPAKVIAHVDGYAASAASFVAIACD--DVLMAPGAFMMIHKAWVFTAGNSDDLIQT 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
A + K+ L E Y + CGK+ ++ + + + +A EA + G+ D + S +
Sbjct: 141 ASLLEKLDGTLAETYSQKCGKSVSDMAEMMAAETWFTAQEAVEAGLADSIEESAPKAQ 198
>gi|228966903|ref|ZP_04127944.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792798|gb|EEM40359.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 241
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 89/169 (52%), Gaps = 11/169 (6%)
Query: 45 VFVTGQI-----EDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I ED+ + + L+A I+L++NSPGG V G+AIY+ ++
Sbjct: 11 IFIYGDIVRWVWEDYFPEDVSSNTFKDDLDALGDVSTINLHVNSPGGSVFEGIAIYNMLK 70
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K ++ + AAS+ S++ AG+ + N+ +++H P G A+++ + A D
Sbjct: 71 RHKAKVNVYVDALAASIASVIAMAGD--TIYMPKNSMLMIHNPWTWTEGNATELRKAADD 128
Query: 158 IVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +I + Y++ G T E +++ LD + +SA EA ++G+ D V
Sbjct: 129 LDRIGNSSKQTYLQKAGEKLTDEMLQEMLDAETWLSADEAYEYGLCDVV 177
>gi|77409464|ref|ZP_00786157.1| Clp protease [Streptococcus agalactiae COH1]
gi|77171931|gb|EAO75107.1| Clp protease [Streptococcus agalactiae COH1]
Length = 106
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS--DIERHAQDIVKIKRRL 165
MG AASMG+++ S+G KG RF LPNA ++HQP GG G D+ A+ ++K + L
Sbjct: 1 MGMAASMGTIIASSGAKGKRFMLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTL 60
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+I N G++ E+V +RD MSA E D+G +D ++ +
Sbjct: 61 EKILADNSGQSIEKVHDDAERDRWMSAQETLDYGFIDAIMENNN 104
>gi|116630106|ref|YP_815278.1| protease subunit of ATP-dependent Clp protease [Lactobacillus
gasseri ATCC 33323]
gi|238854143|ref|ZP_04644490.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Lactobacillus gasseri 202-4]
gi|116095688|gb|ABJ60840.1| Protease subunit of ATP-dependent Clp protease [Lactobacillus
gasseri ATCC 33323]
gi|238833219|gb|EEQ25509.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Lactobacillus gasseri 202-4]
Length = 223
Score = 91.2 bits (225), Expect = 9e-17, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 4/175 (2%)
Query: 41 KERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+R++ + G I + + + Q+ E + I L++NSPGG A IY +
Sbjct: 12 NQRVLTINGTIAEDSWVDDEVTPQVFQDELSQGKGPIDLWLNSPGGDCVAASRIYTMLMN 71
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
++ G AAS S++ AG K P A I++H P GQ D+++ AQ +
Sbjct: 72 YPDNVNVKIDGIAASAASVIAMAGTKVSMV--PTAMIMIHNPLTIVGGQKEDLDQAAQML 129
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ K + Y E++ +D + M+ ++A + G D +L D+ +
Sbjct: 130 AETKESIINAYELKTNLPREKISSMMDDETWMNVNKAIELGFADDMLGQNKDVTD 184
>gi|307245367|ref|ZP_07527455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307254322|ref|ZP_07536160.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307258780|ref|ZP_07540512.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306853708|gb|EFM85925.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862621|gb|EFM94577.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306867131|gb|EFM98987.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
Length = 652
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A L L N K+I+L+I+SPGG V G+AIY+ ++
Sbjct: 16 ISIYDEIGFWGVTAQQFAKDLKALG--NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPAN 73
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ AG + NA +++H+P G G A D+ ++A + K++
Sbjct: 74 KTVYIDGLAASMASVIAMAGNE--IIMPENAMMMIHKPWGIQGGDADDMRKYADLLDKVE 131
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L YV GK+ ++ + L + ++ E + G DK
Sbjct: 132 STLIMAYVAKTGKSESDLAEMLKVETWLTGKECVEQGFADK 172
>gi|254361891|ref|ZP_04978025.1| S14 family bacteriophage protease [Mannheimia haemolytica PHL213]
gi|153093430|gb|EDN74421.1| S14 family bacteriophage protease [Mannheimia haemolytica PHL213]
Length = 653
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/161 (28%), Positives = 80/161 (49%), Gaps = 6/161 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A L L N K+I+L+I+SPGG V G+AIY+ ++
Sbjct: 17 ISIFDEIGFWGVTAQQFAKDLKALG--NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPAN 74
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ AG++ NA +++H+P G G A D+ ++A + K++
Sbjct: 75 KTVYIDGLAASMASVIAMAGDE--IIMPENAMMMIHKPWGIQGGDADDMRKYADLLDKVE 132
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L YV GK ++ + L + ++ E + G DK
Sbjct: 133 STLIMAYVAKTGKYETDLAEMLKEETWLTGKECVEQGFADK 173
>gi|157362829|ref|YP_001471688.1| peptidase S14 ClpP [Serratia proteamaculans 568]
gi|157324916|gb|ABV44012.1| peptidase S14 ClpP [Serratia proteamaculans 568]
Length = 365
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 6/156 (3%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G+ +D + + QL + ++ EI + INS GG V AI T++ ++ F
Sbjct: 31 GEWDDVNSRDVATQLKAVTSK----EIHVKINSYGGSVFTAQAILSTLKRHTAAVTVFID 86
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
G AAS +++ AGE+ NA +++H P G A+D +A + +I+ +
Sbjct: 87 GIAASAATIIAMAGER--VVIPSNAMMMIHNPLTWADGNAADFREYADMLDRIRDSIIAA 144
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y T+E++ + +D + MSA+EA D G D+V
Sbjct: 145 YQSKTSLTHEKLVELMDAETWMSATEAVDLGFADEV 180
>gi|229092690|ref|ZP_04223838.1| Peptidase S14 ClpP [Bacillus cereus Rock3-42]
gi|228690717|gb|EEL44494.1| Peptidase S14 ClpP [Bacillus cereus Rock3-42]
Length = 247
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|146319205|ref|YP_001198917.1| putative ATP-dependent Clp protease, proteolytic subunit
[Streptococcus suis 05ZYH33]
gi|145690011|gb|ABP90517.1| putative ATP-dependent Clp protease, proteolytic subunit
[Streptococcus suis 05ZYH33]
Length = 57
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/51 (68%), Positives = 46/51 (90%)
Query: 18 LVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEA 68
++P+V+EQT+RGERSYDIYSRLLK+RI+ +TG +ED+MA I AQLLFL+A
Sbjct: 1 MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSIIAQLLFLDA 51
>gi|9635590|ref|NP_061501.1| ClpP protease [Pseudomonas phage D3]
gi|5059251|gb|AAD38956.1| ClpP protease [Pseudomonas phage D3]
Length = 296
Score = 90.8 bits (224), Expect = 1e-16, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 6/170 (3%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ + + I + + A+ + L + ++++ INSPGG V G+AIY+ ++
Sbjct: 43 DSTITIYEPIGYDWWTGEGVTAKRIAGALRSIGNDVDVTVNINSPGGDVFEGLAIYNLLR 102
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K ++ +G AAS S + AG++ A +++H G +D+ A
Sbjct: 103 EHKGKVTVNIIGLAASAASFIAMAGDEIRI--GRAAFLMIHNAWLIAMGNRNDLREIADW 160
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ L +IY + +++ K +D + + EA D G D L S
Sbjct: 161 LEPFDMTLADIYAQRTEIDIDDIVKQMDAETWIGGREAVDKGWADAFLES 210
>gi|313123951|ref|YP_004034210.1| ATP-dependent clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
gi|312280514|gb|ADQ61233.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
delbrueckii subsp. bulgaricus ND02]
Length = 244
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 75/143 (52%), Gaps = 4/143 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ K I+L+INSPGG V G+AIY+ ++ K I+ + G AAS+ S++ AG
Sbjct: 44 LKQIGDVKTINLHINSPGGDVFEGVAIYNMLKQSKADINVYIDGLAASIASVIAMAG--N 101
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
N+ +++H P G + ++ + A D+ K+ + Y+ + + +
Sbjct: 102 TIIMPENSMLMIHNPWTIAQGNSKELRKIADDMDKMSESIKTSYLSKSNDKLDLDTLNQL 161
Query: 184 LDRDHIMSASEACDWGVVDKVLM 206
+D + ++A EA ++G+ D+VL
Sbjct: 162 MDEETWLTAKEATEYGLADEVLE 184
>gi|15801553|ref|NP_287570.1| putative ClpP-like protease encoded within prophage CP-933O
[Escherichia coli O157:H7 EDL933]
gi|12515064|gb|AAG56182.1|AE005347_14 putative ClpP-like protease encoded within prophage CP-933O
[Escherichia coli O157:H7 str. EDL933]
Length = 265
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 2/126 (1%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPGG V G+AI++ ++ I+ + G AASM S++ AG+ NA +++H
Sbjct: 13 INSPGGDVFEGIAIFNALKNQGATITVYVDGVAASMASVIAMAGD--TVIMPENAFMMIH 70
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
+P G G A D+ +A + K++ L Y + GKT +E+ L + MS +E
Sbjct: 71 KPWGFSGGDAEDMRSYADLLDKVESVLLPAYAQKTGKTTDEIAAMLADETWMSGAECLAH 130
Query: 199 GVVDKV 204
G D+V
Sbjct: 131 GFADQV 136
>gi|170723514|ref|YP_001751202.1| peptidase S14 ClpP [Pseudomonas putida W619]
gi|169761517|gb|ACA74833.1| peptidase S14 ClpP [Pseudomonas putida W619]
Length = 620
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 13/170 (7%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ I+ A + A ++ Q I++ INSPGG VT +AIY ++ ++
Sbjct: 5 IYDVIDAATAQRVKAIVV------GQMPITVQINSPGGSVTDALAIYTVLRKHTGRVTAI 58
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AS +L+ A ++ ++ +++H P SG A ++ + A + R +
Sbjct: 59 VDGLCASAATLVALAADE--IVMAEHSLMMVHNPWTVASGDADEMRKTADTLDVASREMT 116
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+Y + G + E++ + + ++ EA D G R+D E+SK
Sbjct: 117 ALYTERTGLSAEKITAIMGAETWFNSYEAVDAGFA-----HRVDNSERSK 161
>gi|228960167|ref|ZP_04121825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228799517|gb|EEM46476.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 240
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 14/172 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 12 VFIYGEITKYAWEEYGEVSSITFKNELDELG--DDIETINLYINSPGGSVFETMAIIAML 69
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q + + ++ G AS S+L +K + +A N+ +++H SG A + + A
Sbjct: 70 QRHQAKVISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNADQLRKAAD 127
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
DI +I + + + Y+ G + +++ LD + +SA EA +G+ D+++
Sbjct: 128 DIERINQSMVQHYLTRAGEKLDEDTLKQLLDAETWLSAEEAMGYGLCDEIIS 179
>gi|225467642|ref|XP_002267289.1| PREDICTED: similar to ATP-dependent Clp protease proteolytic
subunit, putative, partial [Vitis vinifera]
Length = 137
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 42/125 (33%), Positives = 69/125 (55%), Gaps = 8/125 (6%)
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ--------PSGGFSGQAS 149
++K I T C+G +LLL AG KG R ALP++ I+L Q P GQA+
Sbjct: 1 YVKSLIFTLCVGNPWGEAALLLVAGAKGNRSALPSSTIMLKQSCPPINLHPIARLQGQAT 60
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
DI+ +++ +K L ++Y K+ GK+ E++E + R S SE ++ ++DKVL +
Sbjct: 61 DIDLARKEVKNVKAELVKLYAKHVGKSPEQIEADIRRPKYFSPSEGVEYSIIDKVLYNER 120
Query: 210 DIEEK 214
E++
Sbjct: 121 SSEDR 125
>gi|326795110|ref|YP_004312930.1| peptidase S14 ClpP [Marinomonas mediterranea MMB-1]
gi|326545874|gb|ADZ91094.1| peptidase S14 ClpP [Marinomonas mediterranea MMB-1]
Length = 342
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 77/165 (46%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
V G D A + +++ EI + + +PGG G+AI + ++ K +
Sbjct: 28 VGGSFFDPDAVAASEFIQAVQSMGDLDEIRVSLATPGGNFFDGLAIANFLKGHKAEVIIE 87
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
+ +A+S GS + G A P + +++H P G G A+D A + +K L
Sbjct: 88 ILSEASSAGSAIAMGASAGKLRAYPASFMMIHNPLTGMQGNANDFRAMADKLDILKSGLL 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+Y + G + + LD++ +M+A EA G VD+++++ +
Sbjct: 148 RLYAERTGIEGATLWEMLDQETLMTAEEAVLKGFVDEIIVTEAPV 192
>gi|224823664|ref|ZP_03696773.1| peptidase S14 ClpP [Lutiella nitroferrum 2002]
gi|224604119|gb|EEG10293.1| peptidase S14 ClpP [Lutiella nitroferrum 2002]
Length = 238
Score = 90.5 bits (223), Expect = 1e-16, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 9/167 (5%)
Query: 41 KERIVFVTGQIEDH---MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+E V++ I A L A I L+INSPGG V A+ ++
Sbjct: 30 EEATVYLYDAIGGWWGITAADFVKDL----AAITAPTIRLHINSPGGDVFDARAMATAIR 85
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+ G AAS + + + ++ ++H+ G A ++ A
Sbjct: 86 NHPSKVVAQIDGLAASAATYVALSADEVEIADG--GFFMIHRAWTLAMGNAGELRDTANL 143
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ KI ++ Y + G++ E+++ + + +A EA D G VD++
Sbjct: 144 LDKIDASISADYQRKTGESAEQIDAWMGAETWFTAQEALDHGFVDRI 190
>gi|114562854|ref|YP_750367.1| peptidase S14, ClpP [Shewanella frigidimarina NCIMB 400]
gi|114334147|gb|ABI71529.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
frigidimarina NCIMB 400]
Length = 656
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 47 VTGQI-EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
+ G + D A I L A +I+ YI S GG V GMAIY+ + S
Sbjct: 13 LYGDVGWDFTAKQIATD---LRAMGKVSQINAYIQSGGGDVMDGMAIYNILARWPCQKSI 69
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
AASM S++ A + NA +++H GG G A D+ +A + K + +
Sbjct: 70 CIESVAASMASVICMAFD--TVIMPSNAFLMIHSNWGGAVGTADDLREYADLLDKWRSSM 127
Query: 166 NEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ Y G + E++ + D +SA EA D G+ D+V+
Sbjct: 128 GKAYQDKAGGKLSDEQLGQFFKEDTWLSAQEAVDLGLADEVIE 170
>gi|160897080|ref|YP_001562662.1| peptidase S14 ClpP [Delftia acidovorans SPH-1]
gi|160362664|gb|ABX34277.1| peptidase S14 ClpP [Delftia acidovorans SPH-1]
Length = 287
Score = 90.5 bits (223), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/216 (21%), Positives = 94/216 (43%), Gaps = 9/216 (4%)
Query: 5 GCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQI--EDHMATLICAQ 62
+ S V ++P E+ N G R+ S ++R + V I + + A+
Sbjct: 9 APMGRPSASVRSEILPRAFERWNPGLRAALEESE--EDRSISVYDVIGYDYWTGDGVTAR 66
Query: 63 LLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
+ L + P ++++ INSPGG + G+AIY+ ++ K ++ +G AAS S++
Sbjct: 67 RIAGALRSLGPG-DVTVNINSPGGDMFEGLAIYNLLREHKGQVTVKVLGLAASAASVIAM 125
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
+G+ +++H +G +D A + + +IY G + +
Sbjct: 126 SGDTVQIARA--GFLMIHNAWVIAAGNRNDFREIADWLEPFDSAMADIYAARTGAEQKAM 183
Query: 181 EKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K +D + + S A + G D++L S + +K
Sbjct: 184 AKLMDAESWLGGSSAVEQGFADELLPSDQVAKGDAK 219
>gi|229176194|ref|ZP_04303685.1| Peptidase S14 ClpP [Bacillus cereus MM3]
gi|228607289|gb|EEK64620.1| Peptidase S14 ClpP [Bacillus cereus MM3]
Length = 241
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 28/214 (13%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDH------MATLICA 61
K D+ +L L + + E DIY V G I + A I
Sbjct: 3 KNDAFKKYLNL------ERPKNEGENDIY----------VYGTIGESWWEESVSANAIKR 46
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
+L + +I LYINS GG V G++IY+ ++ + G AAS SL+ A
Sbjct: 47 KL----SNVKDGDIHLYINSFGGSVFDGISIYNQLKRHSSKVIVHVDGIAASAASLIAMA 102
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G++ N+ +++H+ S G E+ + KI + + Y+K E+E
Sbjct: 103 GDE--IIMPANSMLMVHRASTFAWGNREVFEQQLNALDKIDQSVTNTYMKRFVGERSEME 160
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ L + ++A E +G+ D++ + E+S
Sbjct: 161 ELLKNETWLTAEECKAFGLCDEIADETEEPNEQS 194
>gi|168822022|ref|ZP_02834022.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205341497|gb|EDZ28261.1| Clp protease domain protein [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
Length = 684
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 52 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GK E++ L
Sbjct: 111 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKMPEDIAAMLA 169
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 170 KETWMSGAECVSEGFADKLI 189
>gi|324324387|gb|ADY19647.1| peptidase S14 ClpP [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 247
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|228912077|ref|ZP_04075797.1| Peptidase S14 ClpP [Bacillus thuringiensis IBL 200]
gi|228847580|gb|EEM92514.1| Peptidase S14 ClpP [Bacillus thuringiensis IBL 200]
Length = 247
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHDAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|325674309|ref|ZP_08153998.1| Clp protease [Rhodococcus equi ATCC 33707]
gi|325554989|gb|EGD24662.1| Clp protease [Rhodococcus equi ATCC 33707]
Length = 376
Score = 90.1 bits (222), Expect = 2e-16, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 71/158 (44%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ + A I Q+ + EI++ INSPGG G+AI + ++ +
Sbjct: 25 IGSYWRETSAQAIAEQIK----DITADEITVRINSPGGSAFDGIAIMNALRAHNARVVVH 80
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG++ P +++++H+ G A+ + A + K+ +
Sbjct: 81 VDGLAASAASVIAMAGDE--IVMGPGSQMMIHEAWVFTEGDAAFLRSEADRLDKMSDSIT 138
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+Y + G ++E + + +A EA G+ D++
Sbjct: 139 SLYARRAGGDFDEWRALVAAETWFTAEEAVTAGLADRI 176
>gi|254245318|ref|ZP_04938639.1| Protease subunit of ATP-dependent Clp proteases [Burkholderia
cenocepacia PC184]
gi|124870094|gb|EAY61810.1| Protease subunit of ATP-dependent Clp proteases [Burkholderia
cenocepacia PC184]
Length = 251
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 45 VFVTGQI--EDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
V++ I +D A L + A+ I L INSPGG V A A+ ++
Sbjct: 12 VYLYDVIVTDDWWGGVSAQSFVQALAGITADT----IHLRINSPGGDVFAARAMETAIRG 67
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ G AAS S ++ A ++ A +++H G A D+ A+ +
Sbjct: 68 HSARVIAHVDGVAASAASFVMLAADEVEI--TDGAFVMIHNAWTFAMGNADDLRESAKLL 125
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ L Y K G++ +++ + + MS+ EA G D+
Sbjct: 126 DAVDASLVRTYAKETGQSEDDISAWMAAETWMSSDEAVQRGFADR 170
>gi|255033736|ref|YP_003090180.1| protease/scaffold protein gp4 [Burkholderia phage KS9]
gi|254832774|gb|ACT83017.1| protease/scaffold protein gp4 [Burkholderia phage KS9]
Length = 251
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L INSPGG V A A+ ++ + G AAS S ++ A ++ A
Sbjct: 44 IHLRINSPGGDVFAARAMETAIRGHSARVIAHVDGVAASAASFVMLAADEVEI--TDGAF 101
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H G A D+ A+ + + L Y K G++ +++ + + MS+ E
Sbjct: 102 VMIHNAWTFAMGNADDLRESAKLLDAVDASLVRTYAKETGQSEDDISAWMAAETWMSSDE 161
Query: 195 ACDWGVVDK 203
A G D+
Sbjct: 162 AVQRGFADR 170
>gi|218550008|ref|YP_002383799.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
of prophage [Escherichia fergusonii ATCC 35469]
gi|218357549|emb|CAQ90188.1| putative ATP-dependent Clp protease proteolytic subunit
(Endopeptidase Clp) of prophage [Escherichia fergusonii
ATCC 35469]
Length = 757
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 10/163 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKE----ISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ I I AQ + ++ I L+I+SPGG V G AI++T+ +K
Sbjct: 109 IFLYDVIGGW---GITAQQFITDCKDAGVFEASAIDLHIHSPGGDVMQGFAIFNTLSRLK 165
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIV 159
+ + G AASM S+++ G +P NA I++H+P GG +G + D+ +A +
Sbjct: 166 AKVDIWVDGVAASMASMIV--CLPGATVHMPENAWIMVHKPWGGIAGDSDDMRDYADWLD 223
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
+ + + Y+ G EE+E L + +S +EA + G D
Sbjct: 224 RNEALMLSAYMNKTGLGQEELEAMLKSETWLSGAEAVEKGFAD 266
>gi|240950423|ref|ZP_04754674.1| putative Clp-like protease [Actinobacillus minor NM305]
gi|240295043|gb|EER45899.1| putative Clp-like protease [Actinobacillus minor NM305]
Length = 676
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 45/161 (27%), Positives = 79/161 (49%), Gaps = 6/161 (3%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + +I A L L N K+I+L+I+SPGG V G+AIY+ ++
Sbjct: 38 ISIYDEIGFWGVTAQQFAKDLKALG--NNLKQINLHIHSPGGDVFDGIAIYNLLKNHPAN 95
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ + G AASM S++ AG + NA +++H+P G G A D+ ++A + K++
Sbjct: 96 KTVYIDGLAASMASVIAMAGNE--IIMPENAMMMIHKPWGIQGGDADDMRKYADLLDKVE 153
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
L Y GK+ ++ + L + ++ E + G DK
Sbjct: 154 STLITAYTAKTGKSETDLAEMLKVETWLTGKECIEQGFADK 194
>gi|254721484|ref|ZP_05183273.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A1055]
Length = 251
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 47/171 (27%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + + I+LYINSPGG V MAI +
Sbjct: 23 VFIYGEITKYAWEEYGEVSSITFKNELDELG--DDIETINLYINSPGGSVFETMAIIAML 80
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q I ++ G AS S+L +K + +A N+ +++H SG A + + A
Sbjct: 81 QRHHAKIISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNADQLRKAAD 138
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
DI +I + + + Y+ G + +++ LD + +SA EA +G+ D+++
Sbjct: 139 DIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMGYGLCDEII 189
>gi|229181873|ref|ZP_04309181.1| Peptidase S14 ClpP [Bacillus cereus 172560W]
gi|228601671|gb|EEK59184.1| Peptidase S14 ClpP [Bacillus cereus 172560W]
Length = 247
Score = 89.7 bits (221), Expect = 2e-16, Method: Composition-based stats.
Identities = 44/158 (27%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+++ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARNLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|30263954|ref|NP_846331.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Ames]
gi|47778244|ref|YP_020737.2| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49186802|ref|YP_030054.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Sterne]
gi|165872161|ref|ZP_02216800.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0488]
gi|167640964|ref|ZP_02399221.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0193]
gi|254683648|ref|ZP_05147508.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. CNEVA-9066]
gi|254735992|ref|ZP_05193698.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Western North America USA6153]
gi|254743884|ref|ZP_05201567.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Kruger B]
gi|254754338|ref|ZP_05206373.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Vollum]
gi|254757970|ref|ZP_05209997.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Australia 94]
gi|30258598|gb|AAP27817.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Ames]
gi|47551949|gb|AAT33212.2| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. 'Ames Ancestor']
gi|49180729|gb|AAT56105.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. Sterne]
gi|164712108|gb|EDR17646.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0488]
gi|167511014|gb|EDR86403.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0193]
Length = 251
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 14/171 (8%)
Query: 45 VFVTGQIE--------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
VF+ G+I + + +L L + K I+LYINSPGG V MAI +
Sbjct: 23 VFIYGEITKYAWEEYGEVSSITFKNELDELG--DDIKTINLYINSPGGSVFETMAIIAML 80
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
Q I ++ G AS S+L +K + +A N+ +++H SG A + + A
Sbjct: 81 QRHHAKIISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNADQLRKAAD 138
Query: 157 DIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
DI +I + + + Y+ G + +++ LD + +SA EA +G+ D+++
Sbjct: 139 DIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMGYGLCDEII 189
>gi|257899073|ref|ZP_05678726.1| serine protease [Enterococcus faecium Com15]
gi|257836985|gb|EEV62059.1| serine protease [Enterococcus faecium Com15]
Length = 241
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
VF+ G+I D A L L +I+L+INSPGG V G+AI + ++
Sbjct: 18 VFIFGEIVSFKWDDTDTTAASFQKDLKEL---GEVSQINLHINSPGGSVFEGIAIGNMLR 74
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K + AAS+ S+++++ ++ N+ +++H P G A ++ + A D
Sbjct: 75 QHKARVVAHVDALAASIASVIVASCDE--VIMPENSMLMIHNPWTISMGNAKELRKQADD 132
Query: 158 IVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ KI Y+ G T E++++ +D + MSA EA ++G+ D V+ S +
Sbjct: 133 LDKIAESSVVTYLAKAGEKLTEEKIKQIMDEETWMSAQEAYNYGLCD-VVESANQV 187
>gi|320085572|emb|CBY95351.1| ATP-dependent Clp protease proteolytic subunit Endopeptidase Clp
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
Length = 696
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/140 (31%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A I+L+I+SPGG V G+AIY+ ++ + + G A SM S + G
Sbjct: 64 LAALGQINRINLHIHSPGGAVLDGIAIYNLLKNHPAQKTVYIDGMACSMASAIAMVGNP- 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G+A DI +A + KI+ + IY + GK E++ L
Sbjct: 123 -IIMPENAMMMIHKPRGVAGGEAEDIREYADLLDKIESVIIPIYTEKTGKMPEDIAAMLA 181
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ MS +E G DK++
Sbjct: 182 KETWMSGAECVSVGFADKLI 201
>gi|304439217|ref|ZP_07399135.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
gi|304372349|gb|EFM25937.1| ATP-dependent Clp protease proteolytic subunit [Peptoniphilus
duerdenii ATCC BAA-1640]
Length = 235
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 5/172 (2%)
Query: 41 KERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
E ++++ G I + + +L E +N +I+++INSPGG A IY +
Sbjct: 20 NENVLYIDGVIAEDSWFDDDVTPKLFASELKNKSGDITVWINSPGGDCIAASRIYTMLLE 79
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G AAS S++ AG + P + I++H P G + ++++ +
Sbjct: 80 HKGNVTIKIDGLAASAASVIAMAGTE--VLMSPTSLIMIHNPLTVAIGDSKEMQKAIDML 137
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK-VLMSRI 209
++K + Y G + EE+ +D + ++A + G D ++ R
Sbjct: 138 KEVKESIINAYEIKTGLSREEISNLMDGETWFDKNKAIEMGFCDGTLIDKRT 189
>gi|217958120|ref|YP_002336664.1| Clp protease [Bacillus cereus AH187]
gi|217064485|gb|ACJ78735.1| Clp protease [Bacillus cereus AH187]
gi|282765831|gb|ADA84954.1| Clp protease [Bacillus phage 11143]
Length = 248
Score = 89.7 bits (221), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 35 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHNAEIIVH 90
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 91 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 148
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 149 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 186
>gi|2245061|emb|CAB10484.1| Clp proteinase like protein [Arabidopsis thaliana]
gi|7268455|emb|CAB80975.1| Clp proteinase like protein [Arabidopsis thaliana]
Length = 241
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/118 (41%), Positives = 68/118 (57%), Gaps = 8/118 (6%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + LI A+ L+L+ E+ +K I LYINS G G
Sbjct: 105 DLASYLFKNRIVYLGMSLVPSVTELILAEFLYLQYEDEEKPIYLYINSTGTTKNGEKLGY 164
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
T AIYD M ++KPPI T C+G A +LLL+AG KG R ALP++ I++ Q
Sbjct: 165 DTEAFAIYDVMGYVKPPIFTLCVGNAWGEAALLLTAGAKGNRSALPSSTIMIKQVVYN 222
>gi|261209157|ref|ZP_05923553.1| serine protease [Enterococcus faecium TC 6]
gi|289566715|ref|ZP_06447130.1| serine protease [Enterococcus faecium D344SRF]
gi|260076870|gb|EEW64601.1| serine protease [Enterococcus faecium TC 6]
gi|289161485|gb|EFD09370.1| serine protease [Enterococcus faecium D344SRF]
Length = 241
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 48/176 (27%), Positives = 86/176 (48%), Gaps = 15/176 (8%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
VF+ G+I D A L L +I+L+INSPGG V G+AI + ++
Sbjct: 18 VFIFGEIVSFKWDDTDTTAASFQKDLKEL---GEVSQINLHINSPGGSVFEGIAIGNMLR 74
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K + AAS+ S+++++ ++ N+ +++H P G A ++ + A D
Sbjct: 75 QHKARVVAHVDALAASIASVIVASCDE--VIMPENSMLMIHNPWTISMGNAKELRKQADD 132
Query: 158 IVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ KI Y+ G T E++++ +D + MSA EA ++G+ D V+ S +
Sbjct: 133 LDKIAESSVVTYLAKAGEKLTEEKIKQIMDEETWMSAQEAYNYGLCD-VVESANQV 187
>gi|225863816|ref|YP_002749194.1| peptidase S14 ClpP [Bacillus cereus 03BB102]
gi|228986816|ref|ZP_04146944.1| Peptidase S14 ClpP [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|225785756|gb|ACO25973.1| peptidase S14 ClpP [Bacillus cereus 03BB102]
gi|228772898|gb|EEM21336.1| Peptidase S14 ClpP [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 247
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 77/158 (48%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|229122186|ref|ZP_04251401.1| Peptidase S14 ClpP [Bacillus cereus 95/8201]
gi|228661312|gb|EEL16937.1| Peptidase S14 ClpP [Bacillus cereus 95/8201]
Length = 247
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 45/158 (28%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A ++ ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEVVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG+K N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 147
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+++ L + ++A EA G+ D++
Sbjct: 148 ASYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEI 185
>gi|225466368|ref|XP_002276419.1| PREDICTED: similar to ATP-dependent Clp protease proteolytic
subunit, putative, partial [Vitis vinifera]
Length = 129
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 74/117 (63%)
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
++K PI T C+G A +LLL+AG KG R ALP++ I++ QP F GQA+DI+ ++
Sbjct: 1 YVKSPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIKQPIARFQGQATDIDLARKE 60
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ +K L ++Y K+ GK+ +++E + R S SEA ++G++DKV + E++
Sbjct: 61 VKNVKAELVKLYAKHIGKSPDQIEADIRRPKYFSPSEAVEYGIIDKVQYNERSSEDR 117
>gi|65321281|ref|ZP_00394240.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
gi|167633728|ref|ZP_02392052.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0442]
gi|170688767|ref|ZP_02879971.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0465]
gi|170705747|ref|ZP_02896210.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0389]
gi|177654334|ref|ZP_02936263.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0174]
gi|190566076|ref|ZP_03018995.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis Tsiankovskii-I]
gi|227813139|ref|YP_002813148.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. CDC 684]
gi|229601615|ref|YP_002868186.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0248]
gi|167531134|gb|EDR93821.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0442]
gi|170129287|gb|EDS98151.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0389]
gi|170667283|gb|EDT18042.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0465]
gi|172080824|gb|EDT65905.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0174]
gi|190562995|gb|EDV16961.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis Tsiankovskii-I]
gi|227002833|gb|ACP12576.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. CDC 684]
gi|229266023|gb|ACQ47660.1| prophage LambdaBa02, Clp protease family protein [Bacillus
anthracis str. A0248]
Length = 240
Score = 89.3 bits (220), Expect = 3e-16, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 84/169 (49%), Gaps = 10/169 (5%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
VF+ G+I E + I + E + K I+LYINSPGG V MAI +Q
Sbjct: 12 VFIYGEITKYAWEEYGEVSSITFKNELDELGDDIKTINLYINSPGGSVFETMAIIAMLQR 71
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I ++ G AS S+L +K + +A N+ +++H SG A + + A DI
Sbjct: 72 HHAKIISYIDGIGASCASVLPMISDKIIMYA--NSMMMIHNAWTYASGNADQLRKAADDI 129
Query: 159 VKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+I + + + Y+ G + +++ LD + +SA EA +G+ D+++
Sbjct: 130 ERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLSAEEAMGYGLCDEII 178
>gi|167725633|ref|ZP_02408869.1| peptidase S14, ClpP [Burkholderia pseudomallei DM98]
Length = 366
Score = 89.3 bits (220), Expect = 4e-16, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ ++V +D + ++A++A + G D V+ + + +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCD-VIETPVKL 187
>gi|237812956|ref|YP_002897407.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346]
gi|237505260|gb|ACQ97578.1| peptidase S14, ClpP [Burkholderia pseudomallei MSHR346]
Length = 366
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYARRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|297587079|ref|ZP_06945724.1| peptidase S14, ClpP [Finegoldia magna ATCC 53516]
gi|297575060|gb|EFH93779.1| peptidase S14, ClpP [Finegoldia magna ATCC 53516]
Length = 228
Score = 88.9 bits (219), Expect = 4e-16, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 45 VFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G I + I +L F E +N +I+++INSPGG A IY + K
Sbjct: 17 LYIDGVIAEESWFDDEITPRLFFEELKNKSGDITVWINSPGGDCIAASRIYTMLLEHKGN 76
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++ G AAS S++ AG + P + +++H P G + ++++ + ++K
Sbjct: 77 VAIKIDGLAASAASVIAMAGTE--VLMSPTSLMMIHNPLTVAIGDSKEMQKAMDMLKEVK 134
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ Y G + EE+ +D + ++A + G D L + E+
Sbjct: 135 ESIINAYEIKTGLSREEISNLMDGETWFDKNKAIEMGFCDGTLTDKRKDEK 185
>gi|261418104|ref|YP_003251786.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61]
gi|319767937|ref|YP_004133438.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52]
gi|261374561|gb|ACX77304.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61]
gi|317112803|gb|ADU95295.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52]
Length = 244
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
++ ++I+++I+S GG V A IY+ ++ ++ +A S S++ AG++
Sbjct: 54 SQFKGRDITVWIDSYGGSVFAAAGIYNALKEHDGKVTVKIDSKAMSAASVIAMAGDE--V 111
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A +++H P G D+ + A + IK + Y G++ ++ + +D +
Sbjct: 112 LMSPMAVMMIHNPLTAAYGNMHDLRKVADILDTIKESIVNAYALKTGRSRSKISQMMDDE 171
Query: 188 HIMSASEACDWGVVDKVL 205
MSA+ A G D +L
Sbjct: 172 TWMSANVAVKEGFADGIL 189
>gi|254298353|ref|ZP_04965805.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
gi|157808321|gb|EDO85491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei 406e]
Length = 366
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDVVAADASS--ITVAINSMGGDVFDAFAIYNALRRHAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|282921759|ref|ZP_06329476.1| phage protease [Staphylococcus aureus A9765]
gi|282594021|gb|EFB99010.1| phage protease [Staphylococcus aureus A9765]
Length = 257
Score = 88.9 bits (219), Expect = 5e-16, Method: Composition-based stats.
Identities = 44/169 (26%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNC-GKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E++++ LD + ++A EA +G++D+VL
Sbjct: 135 LDKTDAVSNSAYLDKAKNLDQEQLKQMLDAETWLTAEEALSFGLIDEVL 183
>gi|207724090|ref|YP_002254488.1| clpp-related protease protein [Ralstonia solanacearum MolK2]
gi|206589299|emb|CAQ36261.1| putative clpp-related protease protein [Ralstonia solanacearum
MolK2]
Length = 255
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 12/165 (7%)
Query: 45 VFVTGQI--EDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
V++ I +D AT +L + A+ I L +NSPGG V A A+ ++
Sbjct: 32 VYLYDYIVSDDWWGGVSATTFVKELAGITADV----IRLRVNSPGGDVFAARAMEAALRG 87
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I G AAS S L+ A ++ A I++H+ G A D+ A+ +
Sbjct: 88 HSAKIIVHVDGLAASAASFLIMAADEIEIADG--AFIMIHKAWTALWGNADDLRAEAELL 145
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
KI L Y + G++ +++ + + + A +A + G D+
Sbjct: 146 DKIDSTLVNTYAQRTGQSADDIATWMAAETWLGADDAVERGFADR 190
>gi|315656915|ref|ZP_07909802.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
gi|315492870|gb|EFU82474.1| conserved hypothetical protein [Mobiluncus curtisii subsp. holmesii
ATCC 35242]
Length = 292
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ ++G I + I + E + +++NSPGG V A IY+ +
Sbjct: 23 RVLHISGTIAEESWFDDDITPSIFAAELNAGSGPVKIWLNSPGGDVVAAAQIYNMLIDYP 82
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ A K P + +++H P+ G ++ R +
Sbjct: 83 GTVTVNIDGIAASAASVIAMAATK--VAMSPVSMLMIHNPATMAVGDKDELARAMNMLDS 140
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + Y + G + ++ K +D + M A A D G D++L ++ D
Sbjct: 141 VKESILNAYQEKTGMSRAKLSKLMDAETWMDARAAIDMGFADELLTNQRD 190
>gi|325478747|gb|EGC81858.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerococcus prevotii ACS-065-V-Col13]
Length = 228
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 78/171 (45%), Gaps = 4/171 (2%)
Query: 45 VFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G I + I +L F E +N +I+++INSPGG A IY + K
Sbjct: 17 LYIDGVIAEESWFDDEITPRLFFEELKNKSGDITVWINSPGGDCIAASRIYTMLLEHKGN 76
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++ G AAS S++ AG + P + +++H P G + ++++ + ++K
Sbjct: 77 VTIKIDGLAASAASVIAMAGTE--VLMSPTSLMMIHNPLTVAIGDSKEMQKAIDMLKEVK 134
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ Y G + EE+ +D + ++A + G D L + E+
Sbjct: 135 ESIINAYEIKTGLSREEISNLMDGETWFDKNKAIEMGFCDGTLTDKRKDEK 185
>gi|229824181|ref|ZP_04450250.1| hypothetical protein GCWU000282_01485 [Catonella morbi ATCC 51271]
gi|229786535|gb|EEP22649.1| hypothetical protein GCWU000282_01485 [Catonella morbi ATCC 51271]
Length = 250
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 41/165 (24%), Positives = 77/165 (46%), Gaps = 5/165 (3%)
Query: 43 RIVFVTGQIE---DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
I+ ++G + + A+L+ E K I + +NSPGG V G+ IY+ ++
Sbjct: 20 HILTLSGAVRKRYWTDDDAVSAKLVRDSLEGVDKPILIKLNSPGGDVFEGIEIYNYLKNH 79
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ +K + +++H+ S G +DI++ +
Sbjct: 80 NQSVTVEITGVAASAASIIAMGADKIIMNTG--TTLMIHEASSFAFGNKTDIQKVLNALE 137
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I L IY + G +E++ L+ + ++A EA D G D+V
Sbjct: 138 TIDASLVAIYAERTGIDTDEIKDLLNAETWLTAEEAVDKGFADEV 182
>gi|227431752|ref|ZP_03913779.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
gi|227352435|gb|EEJ42634.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc
mesenteroides subsp. cremoris ATCC 19254]
Length = 235
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 3/146 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ I+L INS GG V G+AIY+ ++ K ++ + G AAS+ S++ AG+
Sbjct: 41 LKELGDVSTINLSINSGGGSVFDGIAIYNMLKSHKATVNVYIEGLAASIASVIAMAGDTI 100
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ + I++H P G A ++ + A + K + +IY + G + +++ ++
Sbjct: 101 TMRSG--SMIMVHMPWTLSQGNAEEMRKTADTLEKTGDSIVDIYSERTGISSDDIRNIMN 158
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDI 211
+ +SA EA + G K L + +
Sbjct: 159 DETWLSAEEAVEQGWATK-LDKKEAV 183
>gi|167824886|ref|ZP_02456357.1| peptidase S14, ClpP [Burkholderia pseudomallei 9]
gi|226198878|ref|ZP_03794441.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9]
gi|225928978|gb|EEH25002.1| peptidase S14, ClpP [Burkholderia pseudomallei Pakistan 9]
Length = 364
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 35 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 92
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 93 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 150
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 151 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 179
>gi|167814835|ref|ZP_02446515.1| peptidase S14, ClpP [Burkholderia pseudomallei 91]
gi|167911620|ref|ZP_02498711.1| peptidase S14, ClpP [Burkholderia pseudomallei 112]
Length = 366
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|167744552|ref|ZP_02417326.1| peptidase S14, ClpP [Burkholderia pseudomallei 14]
Length = 366
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|167619474|ref|ZP_02388105.1| peptidase S14, ClpP [Burkholderia thailandensis Bt4]
Length = 366
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|134277934|ref|ZP_01764649.1| Clp protease domain protein [Burkholderia pseudomallei 305]
gi|134251584|gb|EBA51663.1| Clp protease domain protein [Burkholderia pseudomallei 305]
Length = 359
Score = 88.5 bits (218), Expect = 5e-16, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + A+ I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAVAADASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|187763126|ref|YP_001876601.1| ATP-dependent clp protease proteolytic subunit [Welwitschia
mirabilis]
gi|163311656|gb|ABY26814.1| ATP-dependent clp protease proteolytic subunit [Welwitschia
mirabilis]
Length = 254
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFL----EAENPQKEISLYINSPGGVVTAG 89
D+ + +R VF+ G + + +I A L + AE + + +YINS GG G
Sbjct: 6 DLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGGAFMMG 65
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ-A 148
+ I+DTM IK + T +G AS G+L L+AG +G+R A PN+ I+LHQPS A
Sbjct: 66 LTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADLDNTSA 125
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
S+ + ++++ +++R++ + Y G + + ++ LD+ MS A + +VD V + +
Sbjct: 126 SEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDNVFVPK 185
Query: 209 IDI 211
++
Sbjct: 186 WEL 188
>gi|170017407|ref|YP_001728326.1| protease subunit of ATP-dependent Clp protease [Leuconostoc citreum
KM20]
gi|169804264|gb|ACA82882.1| Protease subunit of ATP-dependent Clp protease [Leuconostoc citreum
KM20]
Length = 229
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 67/137 (48%), Gaps = 2/137 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++ + INS GG V A IY ++ + T A S S++ AG+K P A
Sbjct: 42 DLEIGINSGGGEVDAANEIYTALRNYPGKVITQIESSAYSAASIIAMAGDKVQI--SPVA 99
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++++H S G +D+++ + + + + + Y G+ EE +D++ ++A
Sbjct: 100 QLMIHNASTYAGGNHNDLDKTSNALKSTDKAIAKAYSVKTGRPVEEFLALMDKETWINAD 159
Query: 194 EACDWGVVDKVLMSRID 210
+A + G+VD+V+ +
Sbjct: 160 DALELGLVDEVMTFEKE 176
>gi|220983435|dbj|BAH11204.1| ATP-dependent Clp protease proteolytic subunit [Welwitschia
mirabilis]
Length = 254
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 5/183 (2%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFL----EAENPQKEISLYINSPGGVVTAG 89
D+ + +R VF+ G + + +I A L + AE + + +YINS GG G
Sbjct: 6 DLMDLMTVQRCVFMFGPLTEEGGGVILATLFYYFFNDVAEYRNRPVFVYINSLGGAFMMG 65
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ-A 148
+ I+DTM IK + T +G AS G+L L+AG +G+R A PN+ I+LHQPS A
Sbjct: 66 LTIHDTMILIKERVFTIALGMVASTGTLTLTAGTRGIRHAAPNSLIMLHQPSADLDNTSA 125
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
S+ + ++++ +++R++ + Y G + + ++ LD+ MS A + +VD V + +
Sbjct: 126 SEFVKESEEVNQLRRKMVQSYAIRTGHSEQFIDICLDKPLFMSPRTAWNLNLVDNVFVPK 185
Query: 209 IDI 211
++
Sbjct: 186 WEL 188
>gi|15895167|ref|NP_348516.1| ClpP family serine protease [Clostridium acetobutylicum ATCC 824]
gi|15024872|gb|AAK79856.1|AE007697_9 ClpP family serine protease, possible phage related [Clostridium
acetobutylicum ATCC 824]
gi|325509306|gb|ADZ20942.1| ClpP family serine protease, possible phage relted protein
[Clostridium acetobutylicum EA 2018]
Length = 256
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 8/178 (4%)
Query: 45 VFVTGQIE----DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
VF+ G+I D T + L+A I+L++NSPGG V G+ I + ++
Sbjct: 29 VFIYGEITSYQWDDTDTTAASFKKDLDALGNLNTINLHLNSPGGSVFEGVTICNMLKQNS 88
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ + AAS+ S++ AG+ F NA +++H PS G +SD+ + A D+ K
Sbjct: 89 ATVNVYVDALAASIASVIAMAGD--TIFMPKNAMLMVHNPSSVVWGNSSDMRKTADDLDK 146
Query: 161 IKRRLNEIYVKNCGKTYEE--VEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
I + + Y+ G ++ +++ +D + +SA E +G+ D V SK
Sbjct: 147 IGLSMQQSYLAKAGDKLDQSTLQQLMDNETWLSADECFSYGLCDVVQEENNATACTSK 204
>gi|217973756|ref|YP_002358507.1| peptidase S14 ClpP [Shewanella baltica OS223]
gi|217498891|gb|ACK47084.1| peptidase S14 ClpP [Shewanella baltica OS223]
Length = 284
Score = 88.5 bits (218), Expect = 6e-16, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 69/136 (50%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + K++++YINSPGG + G+AIY+ + K ++T +G AAS S++ AG
Sbjct: 63 LRSIGADKDVTVYINSPGGDMFEGIAIYNRLLEHKGKVTTKVLGLAASAASVIYMAGADD 122
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
RF +A +++H G + A D+ + + ++YV+ G++ + + +D
Sbjct: 123 ARFVASSAFLMIHNCWVFAIGNRHALRNIADDMEEFDAAMVDLYVEGSGQSEKAIATMMD 182
Query: 186 RDHIMSASEACDWGVV 201
+ + +A + G
Sbjct: 183 EETFIRGKKAVELGFA 198
>gi|229061293|ref|ZP_04198642.1| Peptidase S14 ClpP [Bacillus cereus AH603]
gi|228718018|gb|EEL69660.1| Peptidase S14 ClpP [Bacillus cereus AH603]
Length = 247
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNLLKQHDAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
G AAS S++ AG+K +P N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK---IVMPSNTMMMIHQASTIEYGNADLFEKTARDLRKIDSAL 146
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+ + L + ++A EA G+ D++
Sbjct: 147 AASYKKRFVGTDEELRQLLKDETWLTAEEAVALGLADEI 185
>gi|156306210|ref|XP_001617564.1| hypothetical protein NEMVEDRAFT_v1g157296 [Nematostella vectensis]
gi|156194583|gb|EDO25464.1| predicted protein [Nematostella vectensis]
Length = 87
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 38/82 (46%), Positives = 54/82 (65%)
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+RI++HQP GG GQASDIE A++I K+K+ L EI + G+ +VEK DRD+ M+A
Sbjct: 1 SRIMIHQPLGGAEGQASDIEITAREIGKLKKELYEIIAHHSGQKLAKVEKDSDRDYWMTA 60
Query: 193 SEACDWGVVDKVLMSRIDIEEK 214
EA D+G++D+VL E
Sbjct: 61 QEAKDYGMIDEVLERNPRKAED 82
>gi|257428232|ref|ZP_05604630.1| protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|258445568|ref|ZP_05693750.1| prophage protease [Staphylococcus aureus A6300]
gi|258455562|ref|ZP_05703519.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|282905858|ref|ZP_06313713.1| phage protease [Staphylococcus aureus subsp. aureus Btn1260]
gi|257275073|gb|EEV06560.1| protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257855615|gb|EEV78548.1| prophage protease [Staphylococcus aureus A6300]
gi|257862250|gb|EEV85021.1| conserved hypothetical protein [Staphylococcus aureus A5937]
gi|282331150|gb|EFB60664.1| phage protease [Staphylococcus aureus subsp. aureus Btn1260]
Length = 257
Score = 88.1 bits (217), Expect = 6e-16, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E++++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEQLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|258427137|ref|ZP_05688059.1| scaffolding protease [Staphylococcus aureus A9299]
gi|257849915|gb|EEV73874.1| scaffolding protease [Staphylococcus aureus A9299]
Length = 257
Score = 88.1 bits (217), Expect = 7e-16, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 80/169 (47%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ F N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGD--TIFKPKNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNC-GKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E++++ LD + ++A EA +G++D+VL
Sbjct: 135 LDKTDAVSNSAYLDKAKNLDQEQLKQMLDAETWLTAEEALSFGLIDEVL 183
>gi|148747731|ref|YP_001285810.1| putative Clp peptidase [Geobacillus virus E2]
gi|113715673|gb|ABI36822.1| putative Clp peptidase [Geobacillus virus E2]
Length = 243
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 35/138 (25%), Positives = 67/138 (48%), Gaps = 2/138 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
++ K+I+++I+S GG V A IY+ ++ I+ +A S S++ AG++
Sbjct: 55 SQYKGKDITVWIDSYGGSVFAAAGIYNALKEHNGKITVKIDSKAMSAASVIAMAGDE--V 112
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A +++H P G D+ + A + IK + Y G++ ++ + +D +
Sbjct: 113 LMSPMAVMMIHNPLTAAYGNMHDLRKAADILDTIKESIVNAYALKTGRSRSKISQMMDDE 172
Query: 188 HIMSASEACDWGVVDKVL 205
MSA+ A G D +L
Sbjct: 173 TWMSANVAVKEGFADGIL 190
>gi|324528845|gb|ADY48957.1| ATP-dependent Clp protease proteolytic subunit 1 [Ascaris suum]
Length = 122
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 62/98 (63%), Positives = 83/98 (84%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YINSPGG VTAG+ IYDTMQ+I P++T+C+GQA+SMGSLLL AGEKGMR +LPN+RI+
Sbjct: 1 MYINSPGGSVTAGLGIYDTMQYISAPVATWCIGQASSMGSLLLCAGEKGMRSSLPNSRIM 60
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
+HQPSGG G ASD+ A++I ++++RLNE+Y K+ G
Sbjct: 61 VHQPSGGAEGTASDVIIRAEEIARLRKRLNELYAKHTG 98
>gi|220927070|ref|YP_002502372.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
gi|219951677|gb|ACL62069.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
Length = 237
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 3/162 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
E V+V I + + L A I L +NSPGG V A A+ ++ K
Sbjct: 29 EATVYVYDAIGSYYGIDAQTFVRELAAIEAGT-IHLRLNSPGGDVFAARAMKTALEQHKA 87
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ G AAS S L+ A ++ A +++H+P G A ++ A + K+
Sbjct: 88 KVVAHIDGVAASAASFLMLAADEIAIADG--AFVMIHEPWSLALGTADEMRASADLLDKV 145
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ Y + GK+ EEV + + SA EA + G D+
Sbjct: 146 GEAIAADYQRRTGKSAEEVAAWMKAETWFSADEAIENGFADR 187
>gi|302338498|ref|YP_003803704.1| peptidase S14 ClpP [Spirochaeta smaragdinae DSM 11293]
gi|301635683|gb|ADK81110.1| peptidase S14 ClpP [Spirochaeta smaragdinae DSM 11293]
Length = 277
Score = 88.1 bits (217), Expect = 8e-16, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 74/149 (49%), Gaps = 3/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +L L AE ++I + +NSPGG V G+AIY+T+ + +S G AAS+
Sbjct: 32 AADFKRELEAL-AEGNSRDIVVNLNSPGGDVFEGIAIYNTISAYRSRVSVRITGVAASIA 90
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
S++ +G + R + ++H P G+A + AQ + KI ++ IY ++
Sbjct: 91 SVIALSGSR--RIMGEGSFFMIHNPYAVVMGEADVLRSRAQTLDKIALQMVGIYERHSSL 148
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +E+EK +D + EA G D +
Sbjct: 149 SKDEIEKAMDEETWYGPDEAYAAGFADAI 177
>gi|307943763|ref|ZP_07659107.1| ClpP protease [Roseibium sp. TrichSKD4]
gi|307773393|gb|EFO32610.1| ClpP protease [Roseibium sp. TrichSKD4]
Length = 283
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 3/142 (2%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ INSPGG + G AIY+ ++ ++ +G AAS GS++ ++ P
Sbjct: 76 DVTVQINSPGGDLFEGTAIYNLLREHPAKVTVEVVGWAASAGSIIAMGSDEIRM--GPGT 133
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++++H G G D + + K + +IY G ++ + +D + +S
Sbjct: 134 KMMVHNAWGAVVGNRHDFKAGMELFEKFDAGIVDIYEARTGADRADIVRLMDEETFLSPE 193
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
+A G D V+ + + I E +
Sbjct: 194 DAKKLGFAD-VVDNGLSIPEAN 214
>gi|167893326|ref|ZP_02480728.1| peptidase S14, ClpP [Burkholderia pseudomallei 7894]
Length = 358
Score = 87.8 bits (216), Expect = 8e-16, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL + + I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDAIATDASS--ITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + Y + G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYAQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|298346364|ref|YP_003719051.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mobiluncus
curtisii ATCC 43063]
gi|298236425|gb|ADI67557.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mobiluncus
curtisii ATCC 43063]
Length = 294
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 36/175 (20%), Positives = 73/175 (41%), Gaps = 5/175 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I + + + E +++++NSPGG V A IY+ +
Sbjct: 22 RVLRINGAIAEESWLDDDVTPAIFASELNAGSGPVTVWLNSPGGDVVAAARIYNMLLDYP 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ P + +++H P+ G +++ R +
Sbjct: 82 GQVRVNIDGIAASAASVIAM--AASNVAMSPVSMLMIHNPATLAMGDKTELSRALDMLES 139
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM-SRIDIEEK 214
+K + Y G + ++ K +D + M A+ A + G D++L R +K
Sbjct: 140 VKDSIINAYQLKTGLSRAKLSKLMDAETWMDATAAIELGFADELLTGKRAPTPDK 194
>gi|194366275|ref|YP_002028885.1| peptidase S14 ClpP [Stenotrophomonas maltophilia R551-3]
gi|194349079|gb|ACF52202.1| peptidase S14 ClpP [Stenotrophomonas maltophilia R551-3]
Length = 280
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 33/145 (22%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K++ + INSPGG G+AIY+ ++ + ++ MG AAS S++ AG++
Sbjct: 73 DKDVVVNINSPGGDFFEGVAIYNLLREHQGRVTVQVMGLAASAASVIAMAGDE--ILMGD 130
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ +++H G D+ A+ + + ++Y G T E + +D + +
Sbjct: 131 GSFLMIHNAWAVAIGNRHDMADAAKLLEPFDTAMAKVYAARSGVTEAEAARMMDEETWIG 190
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A++A + G D +L ++ +
Sbjct: 191 AAQAVEDGFADGLLDGAAATKDAKQ 215
>gi|229193795|ref|ZP_04320727.1| Peptidase S14 ClpP [Bacillus cereus ATCC 10876]
gi|228589678|gb|EEK47565.1| Peptidase S14 ClpP [Bacillus cereus ATCC 10876]
Length = 241
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 28/213 (13%)
Query: 8 KKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDH------MATLICA 61
K D+ +L L + + E DIY V G I + A I
Sbjct: 3 KNDAFKKYLNL------EKPKNEGENDIY----------VYGTIGESWWEESVSANAIKR 46
Query: 62 QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSA 121
+L +I LYINS GG V G++IY+ ++ + G AAS SL+ A
Sbjct: 47 KL----NNVKDGDIHLYINSFGGSVFDGISIYNQLKRHSSKVIVHVDGIAASAASLIAMA 102
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
G++ N+ +++H+ S G E+ + KI + + Y+K E+E
Sbjct: 103 GDE--IIMPANSMLMVHRASTFAWGNREVFEQQLNALDKIDQSVTNTYMKRFVGERSEME 160
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L + ++A E +G+ D++ + D E+
Sbjct: 161 DLLKNETWLTAEECKAFGLCDEIADEKEDPNEE 193
>gi|76162449|gb|ABA40787.1| SJCHGC02727 protein [Schistosoma japonicum]
Length = 98
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 61/93 (65%), Positives = 81/93 (87%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D +A L+ AQLL+L++E+ + I +YINSPGGVVTAG+AIYDTMQFIKPP++T+C+GQA+
Sbjct: 2 DEVAGLVVAQLLYLQSEDKKIPIHIYINSPGGVVTAGLAIYDTMQFIKPPVATWCVGQAS 61
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
SMGSLLL+AG G+RFALP++RI++HQPSG
Sbjct: 62 SMGSLLLAAGAPGLRFALPHSRIMVHQPSGSAH 94
>gi|218898920|ref|YP_002447331.1| Clp protease [Bacillus cereus G9842]
gi|218544430|gb|ACK96824.1| Clp protease [Bacillus cereus G9842]
Length = 247
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/170 (27%), Positives = 83/170 (48%), Gaps = 7/170 (4%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 35 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNQLKQHSAEIIVH 90
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS S++ AG++ N +++HQ S G A E+ A+D+ KI L
Sbjct: 91 IDGWAASAASVIAMAGDR--IIMPSNTMMMIHQASTFEYGNADLFEKTARDLRKIDSALA 148
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
Y K T EE+++ L + ++A EA G+ D++ I+I++ +
Sbjct: 149 GSYKKRFVGTDEELKQLLKDETWLTAEEAVALGLADEIADE-IEIDDTQE 197
>gi|298693635|gb|ADI96857.1| Prophage Clp protease-like protein [Staphylococcus aureus subsp.
aureus ED133]
Length = 257
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 45 VFVTGQI--EDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I + + + + A L+ EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWVESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHP 79
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A + K
Sbjct: 80 AKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADLLEK 137
Query: 161 IKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
N Y+ E +++ LD + ++A EA +G++D+VL
Sbjct: 138 TDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEVL 183
>gi|163941505|ref|YP_001646389.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4]
gi|163863702|gb|ABY44761.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4]
Length = 247
Score = 87.8 bits (216), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 78/159 (49%), Gaps = 8/159 (5%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G ++ A + ++ ++AE I ++INS GG G+AI + ++ I
Sbjct: 34 IGGWFSENNAEAVRRKIQDVKAEK----IHVHINSGGGSAFDGVAICNLLKQHDAEIIVH 89
Query: 107 CMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
G AAS S++ AG+K +P N +++HQ S G A E+ A+D+ KI L
Sbjct: 90 IDGWAASAASVIAMAGDK---IVMPSNTMMMIHQASTIEYGNADLFEKTARDLRKIDSAL 146
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
Y K T EE+ + L + ++A EA G+ D++
Sbjct: 147 AASYKKRFVGTDEELRQLLKDETWLTAEEAVALGLADEI 185
>gi|256392039|ref|YP_003113603.1| peptidase S14 ClpP [Catenulispora acidiphila DSM 44928]
gi|256358265|gb|ACU71762.1| peptidase S14 ClpP [Catenulispora acidiphila DSM 44928]
Length = 564
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 4/154 (2%)
Query: 51 IEDHMAT-LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
I D + + AQ E + I L++NSPGG V G+AI+ + + ++T+
Sbjct: 37 IYDEVGFFGVTAQDFIDEMKQVDGPIDLHLNSPGGEVWDGIAIHAYLSG-RGGVTTYVDA 95
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS+ S++ AGE NA +++H G G A+D+ A+ + ++ + IY
Sbjct: 96 LAASIASVIAMAGE--QIVMGRNASLMIHDGWGLVIGNAADMREQAELLDRVSDNIASIY 153
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
GK ++ + + EA D G+ D+
Sbjct: 154 ADRTGKPKDDWRAAMLAETWYIGQEAVDAGLADR 187
>gi|304390288|ref|ZP_07372241.1| protease subunit of ATP-dependent Clp protease family protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
gi|304326044|gb|EFL93289.1| protease subunit of ATP-dependent Clp protease family protein
[Mobiluncus curtisii subsp. curtisii ATCC 35241]
Length = 290
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ ++G I + I + E +++++NSPGG V A IY+ +
Sbjct: 22 RVLRISGTIAEESWFDDDITPSIFASELNAGSGPVTIWLNSPGGDVVAAAQIYNMLIDYP 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ P + +++H P+ G ++ R +
Sbjct: 82 SHVTVNIDGIAASAASVIAM--AASTVAMSPVSMLMIHNPATMAVGDKDELARAMSMLDS 139
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + Y + G + ++ K +D + M A A D G D++L ++ D
Sbjct: 140 VKESILNAYQEKTGMSRAKLSKLMDAETWMDARAAIDMGFADELLTNQRD 189
>gi|296159099|ref|ZP_06841926.1| peptidase S14 ClpP [Burkholderia sp. Ch1-1]
gi|295890660|gb|EFG70451.1| peptidase S14 ClpP [Burkholderia sp. Ch1-1]
Length = 226
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 5/165 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+++ I + + L+ + + ++L INSPGG G A+ +Q ++
Sbjct: 27 IYLYDTIGGWYGIAVQDVIKELK--DAKGAVNLRINSPGGDAFDGRALATAIQQH-GNVT 83
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS + + A + A +++H G A+++ + KI
Sbjct: 84 AHIDGLAASAATYVALAAKSVNIAEG--AFMMVHNAWTVAVGNAAELGDTIAMLQKIDTS 141
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ Y GKT +EV+ +D + +A EA D G+VD ++ ++
Sbjct: 142 IANDYAAKTGKTLDEVKAWMDAETWFTAQEAKDAGLVDNIVAAKS 186
>gi|257870381|ref|ZP_05650034.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
gi|257804545|gb|EEV33367.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
Length = 238
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/177 (20%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 43 RIVFVTGQIE---DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
I+ ++G I+ I A+L+ + ++ + +NS GG V G+ IY+ ++
Sbjct: 24 HILTLSGVIQKRYWSDDKYIDAKLIRDNLDGVTDDVVIRLNSNGGDVFQGVEIYNYLKNH 83
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
I+ M AAS + + + ++ + ++H+ G +DI++ Q +
Sbjct: 84 SSHITVEVMATAASAATFICAGADEVIMNVG--TSFMIHEAETVGWGNKTDIKKTLQALE 141
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
I + IY G++ +++ ++ +A EA +G D V R + +E+ +
Sbjct: 142 TIDDSILSIYADKTGQSKDQITTWINEARWFTADEAVKFGFADSV--KRAEPQEEPQ 196
>gi|323442648|gb|EGB00276.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus O46]
Length = 255
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/166 (24%), Positives = 79/166 (47%), Gaps = 7/166 (4%)
Query: 45 VFVTGQI--EDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G I + + + + A L+ EI ++INS GG V G AIY+ ++
Sbjct: 18 IFIYGDIVSDKWVESDVTATDFKNKLDELGDISEIDVHINSSGGSVFEGHAIYNMLKMHP 77
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A + K
Sbjct: 78 AKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADLLEK 135
Query: 161 IKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
N Y+ E +++ LD + ++A EA +G++D+VL
Sbjct: 136 TDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEVL 181
>gi|226364131|ref|YP_002781913.1| peptidase S14 family protein [Rhodococcus opacus B4]
gi|226242620|dbj|BAH52968.1| peptidase S14 family protein [Rhodococcus opacus B4]
Length = 189
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/167 (25%), Positives = 80/167 (47%), Gaps = 3/167 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL +RIV +TG+++ A L +A + E+ ++++ V A + DT+
Sbjct: 17 RLFDKRIVSLTGRLDAEATNRAAASLALFDA-SGDDEVQVWLHGVDADVDAAATLLDTLD 75
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+ P+ C G + LL+ ++ R A +A L +P +G ASD+ A+
Sbjct: 76 LMGVPLHVHCRGDVRGVAVALLAPADR--RTAAAHATFHLREPRTSCTGPASDVAIAAEQ 133
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ RRL + +CG+ + V + I++A EA D+G++D +
Sbjct: 134 HEQQLRRLQQRIADSCGRPLDTVIGDMREHRILTADEARDYGLIDTI 180
>gi|169838667|ref|ZP_02871855.1| ATP-dependent Clp protease proteolytic subunit [candidate
division TM7 single-cell isolate TM7a]
Length = 65
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENP 71
+ P+V+E RGERSYDIYSRLLK+RI+FV+G++ED MA I AQLLFL+A++
Sbjct: 7 NNMSVYSPVVIENDGRGERSYDIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDN 65
>gi|168204793|ref|ZP_02630798.1| phage protein [Clostridium perfringens E str. JGS1987]
gi|170663602|gb|EDT16285.1| phage protein [Clostridium perfringens E str. JGS1987]
Length = 672
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 7/149 (4%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ + Q+ E +I NSPGG + A IY ++ K I G AAS S
Sbjct: 30 SKVINQIKAANGEKLTIKI----NSPGGDIFAASDIYTELREYKGEIEIKITGMAASAAS 85
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++ AG+ P A++++H S G G D+E A+ + + Y+ G +
Sbjct: 86 VIAMAGK---SSMSPTAQLMVHNVSTGTWGDYRDMEHTAEVLKNANDTIANAYMCKTGMS 142
Query: 177 YEEVEKTLDRDHIMSASEACDWGVVDKVL 205
EE + ++ + +SA++A + G +D+++
Sbjct: 143 REEALELMNNETYLSATKAKELGFIDEIM 171
>gi|288927924|ref|ZP_06421771.1| ATP-dependent Clp protease proteolytic subunit [Prevotella sp. oral
taxon 317 str. F0108]
gi|288330758|gb|EFC69342.1| ATP-dependent Clp protease proteolytic subunit [Prevotella sp. oral
taxon 317 str. F0108]
Length = 369
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 46/167 (27%), Positives = 88/167 (52%), Gaps = 9/167 (5%)
Query: 45 VFVTGQIEDHM---ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G + D + + A+L+ L+++ + I + INS GG V +G+AIY+ ++ K
Sbjct: 17 ILLYGDVGDGQRVDSGRVVAELMALQSQYSK--IDVRINSRGGDVFSGIAIYNALRTSKA 74
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AAS+ ++ G+ + P A+++LH SGG G AS++ + A+ + +
Sbjct: 75 DITVYIDGVAASIAGIIALCGKP--LYMSPYAKLMLHAVSGGTWGNASELRQMAEVMENL 132
Query: 162 KRRLNEIYVKNCGKTYEEVEKTL--DRDHIMSASEACDWGVVDKVLM 206
+ L + CG +EV ++DH +SA EA ++D +
Sbjct: 133 QGDLASMIAGRCGMKKDEVLAKYFDEKDHWISAQEALSMKLIDGIYD 179
>gi|255974949|ref|ZP_05425535.1| clp protease domain-containing protein [Enterococcus faecalis T2]
gi|255967821|gb|EET98443.1| clp protease domain-containing protein [Enterococcus faecalis T2]
Length = 253
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N +++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 38 NHNEDVEVTINSYGGLVDMGNEIYTALRSYEGHVKVNVV-MAGSAASIIAMAG--NTVAI 94
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +I++H + G G +++ ++ + K L YV GK EE+ +D++
Sbjct: 95 SPVGQIMIHNVAMGAGGDYHTMDKASEILQKANNSLANAYVSKTGKAKEEILALMDKETW 154
Query: 190 MSASEACDWGVVDKVLMSRID 210
++A EA + G VD+++ +
Sbjct: 155 LTAEEAVENGFVDEIMFENTE 175
>gi|227875044|ref|ZP_03993189.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mobiluncus
mulieris ATCC 35243]
gi|306817331|ref|ZP_07451076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mobiluncus
mulieris ATCC 35239]
gi|227844322|gb|EEJ54486.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mobiluncus
mulieris ATCC 35243]
gi|304649772|gb|EFM47052.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mobiluncus
mulieris ATCC 35239]
Length = 292
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/170 (22%), Positives = 75/170 (44%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ ++G I + I + E +++++NSPGG V A IY+ +
Sbjct: 22 RVLRISGTIAEESWFDDDITPSIFASELNAGSGPVTIWLNSPGGDVVAAAQIYNMLIDYP 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ A K P + +++H P+ G ++ R +
Sbjct: 82 GEVTVNIDGIAASAASVIAMAATK--VAMSPVSMLMIHNPATMAVGDKDELARAMSMLDS 139
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + Y + + ++ K +D + M A A D G D++L ++ D
Sbjct: 140 VKESILNAYQEKTNLSRAKLSKLMDAETWMDARAAIDMGFADELLTNQRD 189
>gi|323439020|gb|EGA96753.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus O11]
Length = 255
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 18 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 74
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 75 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 132
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 133 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 181
>gi|153810555|ref|ZP_01963223.1| hypothetical protein RUMOBE_00936 [Ruminococcus obeum ATCC 29174]
gi|149833734|gb|EDM88815.1| hypothetical protein RUMOBE_00936 [Ruminococcus obeum ATCC 29174]
Length = 223
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 5/142 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + +EI + +NS GG V AG IY ++ K + A S ++ AG+
Sbjct: 36 LNSAAVDEEIEVLVNSGGGSVMAGQEIYSALK-QKKNVVIKIQSMAGSAAGVIAMAGK-- 92
Query: 126 MRFALPNARILLHQPSGG-FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
P A I++H S SG D++++A+ + ++ L Y + G++ +E+ K +
Sbjct: 93 -CQMSPVAMIMIHNVSMSGASGDYHDMQKNAEILKQMNSALAAAYTEKSGRSLDEILKLM 151
Query: 185 DRDHIMSASEACDWGVVDKVLM 206
DR+ ++A++ D+G VD+++
Sbjct: 152 DRETWLTANQCLDYGFVDEIMS 173
>gi|126011097|ref|YP_001039922.1| head maturation protease [Streptococcus phage phi3396]
gi|124389366|gb|ABN10808.1| head maturation protease [Streptococcus phage phi3396]
Length = 268
Score = 87.4 bits (215), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I + +NS GG V G IY ++ + G AAS+ S+++ AG+ + A P A
Sbjct: 43 DIQVRLNSGGGEVFVGSEIYSALKDYPGNVEVVITGLAASIASIIMLAGD--VIKASPMA 100
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++H S G G ++ ++ + L +Y + GK E+ + LD + +A+
Sbjct: 101 QIMIHNASWGSYGDYRQLKHDSEVVENASISLAGMYARKTGKQETEIRELLDAETWFTAN 160
Query: 194 EACDWGVVDKVLMS 207
A + G++D +L +
Sbjct: 161 SAKEIGLIDDILYN 174
>gi|19745487|ref|NP_606623.1| hypothetical protein spyM18_0371 [Streptococcus pyogenes MGAS8232]
gi|21910248|ref|NP_664516.1| hypothetical protein SpyM3_0712 [Streptococcus pyogenes MGAS315]
gi|28876177|ref|NP_795404.1| head maturation protease [Streptococcus pyogenes phage 315.1]
gi|28896052|ref|NP_802402.1| scaffolding protein [Streptococcus pyogenes SSI-1]
gi|19747603|gb|AAL97122.1| hypothetical phage protein [Streptococcus pyogenes MGAS8232]
gi|21904443|gb|AAM79319.1| conserved hypothetical protein - phage-associated [Streptococcus
pyogenes phage 315.1]
gi|28811302|dbj|BAC64235.1| putative scaffolding protein [Streptococcus pyogenes SSI-1]
Length = 268
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I + +NS GG V G IY ++ + G AAS+ S+++ AG+ + A P A
Sbjct: 43 DIQVRLNSGGGEVFVGSEIYSALKDYPGNVEVVITGLAASIASIIMLAGD--VIKASPMA 100
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++H S G G ++ ++ + L +Y + GK E+ + LD + +A+
Sbjct: 101 QIMIHNASWGSYGDYRQLKHDSEVVENASISLAGMYAQKTGKQETEIRELLDAETWFTAN 160
Query: 194 EACDWGVVDKVLMS 207
A + G++D +L +
Sbjct: 161 SAKEIGLIDDILYN 174
>gi|307285457|ref|ZP_07565596.1| Clp protease [Enterococcus faecalis TX0860]
gi|306502681|gb|EFM71946.1| Clp protease [Enterococcus faecalis TX0860]
Length = 257
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 35/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N +++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 42 NHNEDVEVTINSYGGLVDMGNEIYTALRSYEGHVKVNVV-MAGSAASIIAMAG--NTVAI 98
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +I++H + G G +++ ++ + K L YV GK EE+ +D++
Sbjct: 99 SPVGQIMIHNVAMGAGGDYHTMDKASEILQKANNSLANAYVSKTGKAKEEILALMDKETW 158
Query: 190 MSASEACDWGVVDKVLMSRID 210
++A EA + G VD+++ +
Sbjct: 159 LTAEEAVENGFVDEIMFENTE 179
>gi|160873909|ref|YP_001553225.1| peptidase S14 ClpP [Shewanella baltica OS195]
gi|160859431|gb|ABX47965.1| peptidase S14 ClpP [Shewanella baltica OS195]
gi|315266141|gb|ADT92994.1| peptidase S14 ClpP [Shewanella baltica OS678]
Length = 668
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+ I+SPGG V GMAIY+ ++ + G AASM S++ A ++
Sbjct: 48 LQALGKVGTITARIHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDE- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P GG G A D+ ++A + K++ L Y G + +E+ L
Sbjct: 107 -VIMPENAMMMVHKPWGGTLGDAEDMRKYADLLDKVEGNLVSAYQHKTGLSEDELHALLA 165
Query: 186 RDHIMSASEACDWGVV 201
+ ++ EA + G
Sbjct: 166 AETWLTGREAVEKGFA 181
>gi|294665723|ref|ZP_06730997.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
gi|292604507|gb|EFF47884.1| ATP-dependent Clp protease proteolytic subunit [Xanthomonas fuscans
subsp. aurantifolii str. ICPB 10535]
Length = 215
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 60/141 (42%), Gaps = 3/141 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L A + I L I+SPGG V A A+ + K + G AAS + + A ++
Sbjct: 23 LAAIDADT-IHLRIDSPGGDVFAARAMMTAIAQHKATVIAHVDGLAASAATGICMACDEV 81
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
A ++H G +D+ + + + KI L Y + G +V + ++
Sbjct: 82 EITQG--AGFMIHNAWTIAIGNKADMAKTGELLGKIDDGLAGDYTRRTGNEVAQVVQWMN 139
Query: 186 RDHIMSASEACDWGVVDKVLM 206
+ +A EA + G D+V+
Sbjct: 140 DETWFTADEAKEHGFADRVIE 160
>gi|320140399|gb|EFW32254.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA131]
gi|320142757|gb|EFW34560.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA177]
Length = 255
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 18 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 74
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 75 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 132
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 133 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 181
>gi|134300444|ref|YP_001113940.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1]
gi|134053144|gb|ABO51115.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1]
Length = 258
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 73/153 (47%), Gaps = 4/153 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L KEI ++INS GG V G AIY ++ + + G A S+ S++ AG++
Sbjct: 50 LAKYPDVKEIKIFINSYGGSVFEGTAIYSQLRRHPAQKTVYIDGFACSVASVIAMAGDR- 108
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
N +++H +G A+ + + A D+ I + Y++ T E++ +
Sbjct: 109 -VIMPKNTMMMIHNAWNIVAGNATQLRKAADDLDTIMAGNRQSYLQKSNGKITEEKLIEL 167
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
LD + ++A + ++G D++L D+ E +
Sbjct: 168 LDAETWLTAEQCIEYGFADELLEKDADLTEAKQ 200
>gi|295402312|ref|ZP_06812267.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93]
gi|294975585|gb|EFG51208.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93]
Length = 242
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/148 (24%), Positives = 72/148 (48%), Gaps = 4/148 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
++ K+I+++I+S GG V A IY+ ++ I+ +A S S++ AG++
Sbjct: 54 SQFKGKDITVWIDSYGGSVFAAAGIYNALKEHDGRITVKIDSKAMSAASVIAMAGDE--V 111
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A +++H P G D+ + A + +K L YV G++ ++ + +D +
Sbjct: 112 LMSPMAVMMIHNPLTAAYGNMHDLRKIADILDTVKESLINAYVLKTGRSRSKISQMMDDE 171
Query: 188 HIMSASEACDWGVVDKVL--MSRIDIEE 213
MSA+ A G D +L + ++ +
Sbjct: 172 TWMSANVAVKEGFADGILYQDNNPEVSD 199
>gi|152999295|ref|YP_001364976.1| peptidase S14 ClpP [Shewanella baltica OS185]
gi|151363913|gb|ABS06913.1| peptidase S14 ClpP [Shewanella baltica OS185]
Length = 671
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+ I+SPGG V GMAIY+ ++ + G AASM S++ A ++
Sbjct: 48 LQALGKVGTITARIHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDE- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P GG G A D+ ++A + K++ L Y G + +E+ L
Sbjct: 107 -VIMPENAMMMVHKPWGGTLGDAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLA 165
Query: 186 RDHIMSASEACDWGVV 201
+ ++ EA + G
Sbjct: 166 AETWLTGREAVEKGFA 181
>gi|126175793|ref|YP_001051942.1| peptidase S14 ClpP [Shewanella baltica OS155]
gi|125998998|gb|ABN63073.1| peptidase S14, ClpP [Shewanella baltica OS155]
Length = 640
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+ I+SPGG V GMAIY+ ++ + G AASM S++ A ++
Sbjct: 20 LQALGKVGTITARIHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDE- 78
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P GG G A D+ ++A + K++ L Y G + +E+ L
Sbjct: 79 -VIMPENAMMMVHKPWGGTLGDAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLA 137
Query: 186 RDHIMSASEACDWGVV 201
+ ++ EA + G
Sbjct: 138 AETWLTGREAVEKGFA 153
>gi|148544339|ref|YP_001271709.1| peptidase S14, ClpP [Lactobacillus reuteri DSM 20016]
gi|148531373|gb|ABQ83372.1| peptidase S14, ClpP [Lactobacillus reuteri DSM 20016]
Length = 243
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N ++I + I S GG V A IY ++ + G AAS S++ AG++
Sbjct: 38 NSDEDIEVDIASGGGSVFAASEIYTMLKAYSGKVVVNIQGLAASAASVIAMAGDEINM-- 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +++++H+ S G A D ++ + + + + Y G +++ + + +
Sbjct: 96 SPTSQMMIHKASTISMGNADDFAHDSKMLDVMDQSIVNAYEAKTGMDRDDILQLMANETW 155
Query: 190 MSASEACDWGVVDKV 204
M+A +A D G D +
Sbjct: 156 MTAQDAVDKGFADNI 170
>gi|168186894|ref|ZP_02621529.1| serine protease [Clostridium botulinum C str. Eklund]
gi|169295178|gb|EDS77311.1| serine protease [Clostridium botulinum C str. Eklund]
Length = 246
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 7/164 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A I Q LE+ N I+++INS GG V G+AIY+ ++ + + G A S+
Sbjct: 43 SANYIQKQ---LESINNVSNINIFINSYGGEVKEGLAIYNQLKRHPAQKTVYVDGFACSI 99
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG+K N +++H + G G A ++ + A D+ I + Y+ G
Sbjct: 100 ASVIAMAGDK--VIMGTNTLMMIHHAAMGAWGNAEELRKAANDVEVIDKASCSSYLTKAG 157
Query: 175 --KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ E + + LD ++A + +G+ D++ D K++
Sbjct: 158 DKLSEETLNQLLDNQTWLNAEQCLQYGLCDEIAGKEDDNVSKAQ 201
>gi|228955763|ref|ZP_04117752.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228803918|gb|EEM50548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 234
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
I QL +E+ I NSPGG V G IY ++ + +G AAS S+
Sbjct: 8 KITKQLDNANSEDLIVSI----NSPGGYVDEGSEIYTALKNYPGHVEVQIVGLAASAASV 63
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ AG+K P A+I++H + G D+E+ A+ + R + YV GK+
Sbjct: 64 IAMAGDKVRI--SPTAKIMIHNAAKWHGGDHRDMEKAAEMLKITDRAIVNAYVIKSGKSE 121
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVL 205
EE+ + + M +A + D+++
Sbjct: 122 EELLNMMAEETWMGPQQALENNFADEIM 149
>gi|227878727|ref|ZP_03996639.1| S14 family endopeptidase ClpP [Lactobacillus crispatus JV-V01]
gi|227861696|gb|EEJ69303.1| S14 family endopeptidase ClpP [Lactobacillus crispatus JV-V01]
Length = 230
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D ++ L + ++I + INS GG V AG IY ++ + I +G A
Sbjct: 27 DSVSPSSIRDAL---NQASGQDIVVEINSRGGYVDAGSEIYTELKKYQGNIDIQIVGYAC 83
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S + AG+ P A++++H+ SGG G D+ Q + ++ + L ++Y K
Sbjct: 84 SAASWIALAGDTVEM--SPTAQLMIHRASGGADGNVDDLASAMQGLDQMDQALVDLYAKR 141
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GK+ +EV + + ++ M+A A G VD ++
Sbjct: 142 TGKSAQEVYQLMAKESWMNAKTAVANGFVDSIM 174
>gi|290475060|ref|YP_003467944.1| ClpP protease [Xenorhabdus bovienii SS-2004]
gi|289174377|emb|CBJ81171.1| ClpP protease [Xenorhabdus bovienii SS-2004]
Length = 283
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/155 (21%), Positives = 69/155 (44%), Gaps = 5/155 (3%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
++ + A L +++ + INSPGG V G+AIY+ ++ ++ +G A
Sbjct: 55 DEGVTAKRIAGALR---AMGDQDVIVNINSPGGDVFEGIAIYNLLRNHSGQVTVNVLGLA 111
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
AS S++ AG++ A +++H G +++ A+ + L +IY
Sbjct: 112 ASAASVIAMAGDEINMGRG--AFLMIHNAWTCCCGNKNELVAVAEALRPFDDSLIDIYAA 169
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
G + + +D + ++ +EA G D +L
Sbjct: 170 RTGIDKASIAQMMDDETFINHTEAIAQGFADGLLT 204
>gi|254503874|ref|ZP_05116025.1| Clp protease domain protein [Labrenzia alexandrii DFL-11]
gi|222439945|gb|EEE46624.1| Clp protease domain protein [Labrenzia alexandrii DFL-11]
Length = 342
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 7/160 (4%)
Query: 46 FVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
FV + D A + L ++N ++++ +NS GG V G +IY+ ++ +
Sbjct: 14 FVGENLWDEGFTAREVITALAEHGSQN---DLTVRLNSGGGYVDDGRSIYNALKVHGGDV 70
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+ F G AAS SL+ AG+K + + A +++H P+ G A D + Q + +
Sbjct: 71 TVFVDGVAASSASLIAMAGDKIVMRSG--ALMMIHDPATITVGTADDHDVSKQALERTAE 128
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ Y G ++V + M+A EA G D+
Sbjct: 129 SFADTYAARSGNDAKDVRAAMKATTWMTADEAVAAGYADE 168
>gi|283469602|emb|CAQ48813.1| protease [Staphylococcus aureus subsp. aureus ST398]
gi|283470729|emb|CAQ49940.1| protease [Staphylococcus aureus subsp. aureus ST398]
Length = 257
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|269203617|ref|YP_003282886.1| phage Clp protease [Staphylococcus aureus subsp. aureus ED98]
gi|262075907|gb|ACY11880.1| phage Clp protease [Staphylococcus aureus subsp. aureus ED98]
Length = 257
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDAIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|300704547|ref|YP_003746150.1| phage-related clp protease [Ralstonia solanacearum CFBP2957]
gi|299072211|emb|CBJ43543.1| phage-related Clp protease [Ralstonia solanacearum CFBP2957]
Length = 255
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 59/129 (45%), Gaps = 2/129 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L +NSPGG V A A+ ++ I G AAS S L+ A ++ A
Sbjct: 64 IRLRVNSPGGDVFAARAMEAALRGHSAKIIVHVDGLAASAASFLIMAADEIEIADG--AF 121
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++H+ G A D+ A+ + KI L Y + G++ +++ + + + A +
Sbjct: 122 IMIHKAWTALWGNADDLRAEAELLDKIDSTLVNTYAQRTGQSADDIATWMATETWLGADD 181
Query: 195 ACDWGVVDK 203
A + G D+
Sbjct: 182 AVERGFADR 190
>gi|12719432|ref|NP_075503.1| protease [Staphylococcus phage phiSLT]
gi|21283128|ref|NP_646216.1| protease [Staphylococcus aureus subsp. aureus MW2]
gi|29028649|ref|NP_803338.1| scaffolding protease [Staphylococcus phage phi 12]
gi|49485840|ref|YP_043061.1| phage protease [Staphylococcus aureus subsp. aureus MSSA476]
gi|57651296|ref|YP_185261.1| prophage L54a, Clp protease, putative [Staphylococcus aureus subsp.
aureus COL]
gi|66395523|ref|YP_239858.1| ORF015 [Staphylococcus phage 42E]
gi|66395672|ref|YP_240004.1| ORF016 [Staphylococcus phage 47]
gi|87161020|ref|YP_494099.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|88195249|ref|YP_500052.1| scaffolding protease [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|156603996|ref|YP_001429942.1| putative protease [Staphylococcus phage tp310-2]
gi|161509680|ref|YP_001575339.1| bacteriophage protease [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|209363589|ref|YP_002268007.1| prohead protease [Staphylococcus phage phi2958PVL]
gi|215401148|ref|YP_002332403.1| putative scaffold protein [Staphylococcus phage phiSauS-IPLA35]
gi|253315475|ref|ZP_04838688.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|257432454|ref|ZP_05608817.1| scaffolding protease [Staphylococcus aureus subsp. aureus E1410]
gi|258420298|ref|ZP_05683245.1| scaffolding protease [Staphylococcus aureus A9719]
gi|258448837|ref|ZP_05696947.1| scaffolding protease [Staphylococcus aureus A6224]
gi|282911087|ref|ZP_06318889.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282919223|ref|ZP_06326958.1| phage protease [Staphylococcus aureus subsp. aureus C427]
gi|284024509|ref|ZP_06378907.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus subsp. aureus 132]
gi|294848478|ref|ZP_06789224.1| phage protease [Staphylococcus aureus A9754]
gi|295407559|ref|ZP_06817352.1| phage protease [Staphylococcus aureus A8819]
gi|296276330|ref|ZP_06858837.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus subsp. aureus MR1]
gi|297207829|ref|ZP_06924263.1| bacteriophage protease [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297246589|ref|ZP_06930422.1| phage protease [Staphylococcus aureus A8796]
gi|297591011|ref|ZP_06949649.1| bacteriophage protease [Staphylococcus aureus subsp. aureus MN8]
gi|300911915|ref|ZP_07129358.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH70]
gi|12697862|dbj|BAB21734.1| protease [Staphylococcus phage phiSLT]
gi|18920573|gb|AAL82313.1| scaffolding protease [Staphylococcus phage phi 12]
gi|21204568|dbj|BAB95264.1| protease [Staphylococcus aureus subsp. aureus MW2]
gi|49244283|emb|CAG42710.1| phage protease [Staphylococcus aureus subsp. aureus MSSA476]
gi|57285482|gb|AAW37576.1| prophage L54a, Clp protease, putative [Staphylococcus aureus subsp.
aureus COL]
gi|62636016|gb|AAX91127.1| ORF015 [Staphylococcus phage 42E]
gi|62636096|gb|AAX91207.1| ORF016 [Staphylococcus phage 47]
gi|87126994|gb|ABD21508.1| phiSLT ORF257-like protein, putative prophage protease
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202807|gb|ABD30617.1| scaffolding protease [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|154818082|gb|ABS87509.1| putative protease [Staphylococcus phage tp310-2]
gi|160368489|gb|ABX29460.1| bacteriophage protease [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|208973090|dbj|BAG74406.1| prohead protease [Staphylococcus phage phi2958PVL]
gi|215260499|gb|ACJ64629.1| gp40 [Staphylococcus phage phiSauS-IPLA35]
gi|257283333|gb|EEV13465.1| scaffolding protease [Staphylococcus aureus subsp. aureus E1410]
gi|257843723|gb|EEV68125.1| scaffolding protease [Staphylococcus aureus A9719]
gi|257857874|gb|EEV80765.1| scaffolding protease [Staphylococcus aureus A6224]
gi|282317033|gb|EFB47407.1| phage protease [Staphylococcus aureus subsp. aureus C427]
gi|282324782|gb|EFB55092.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|294824504|gb|EFG40927.1| phage protease [Staphylococcus aureus A9754]
gi|294967578|gb|EFG43614.1| phage protease [Staphylococcus aureus A8819]
gi|296887545|gb|EFH26444.1| bacteriophage protease [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297176547|gb|EFH35812.1| phage protease [Staphylococcus aureus A8796]
gi|297575897|gb|EFH94613.1| bacteriophage protease [Staphylococcus aureus subsp. aureus MN8]
gi|300886161|gb|EFK81363.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH70]
gi|302333119|gb|ADL23312.1| caseinolytic phage protease [Staphylococcus aureus subsp. aureus
JKD6159]
gi|312438083|gb|ADQ77154.1| bacteriophage protease [Staphylococcus aureus subsp. aureus TCH60]
gi|315128434|gb|EFT84442.1| bacteriophage protease [Staphylococcus aureus subsp. aureus CGS03]
gi|315197736|gb|EFU28070.1| bacteriophage protease [Staphylococcus aureus subsp. aureus CGS01]
gi|329729413|gb|EGG65818.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329730627|gb|EGG67012.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
Length = 257
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|66395603|ref|YP_239937.1| ORF015 [Staphylococcus phage 3A]
gi|62635949|gb|AAX91060.1| ORF015 [Staphylococcus phage 3A]
Length = 257
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|297583106|ref|YP_003698886.1| peptidase S14 ClpP [Bacillus selenitireducens MLS10]
gi|297141563|gb|ADH98320.1| peptidase S14 ClpP [Bacillus selenitireducens MLS10]
Length = 226
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + G I + + + + +I+++INSPGG V A IY+ +
Sbjct: 14 RTLHLDGVIAEETWFGDEVTPAAFKEDLMADKGDITVWINSPGGDVFAASQIYNMLMEYP 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG K P + +++H P G +S+++R + + +
Sbjct: 74 GQVTVKIDGVAASAASVIAMAGTK--VLMSPVSMMMIHNPMTMAIGDSSEMKRAMEMLRE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+K + Y + K +D + +A +A + G D+VL + + E
Sbjct: 132 VKESIMNAYELRTELPRTRLAKLMDDESWFNAKKAVELGFADEVLFTGEESPE 184
>gi|148267495|ref|YP_001246438.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9]
gi|150393549|ref|YP_001316224.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1]
gi|282927349|ref|ZP_06334967.1| peptidase S14, ClpP [Staphylococcus aureus A10102]
gi|147740564|gb|ABQ48862.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9]
gi|149946001|gb|ABR51937.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1]
gi|282590673|gb|EFB95749.1| peptidase S14, ClpP [Staphylococcus aureus A10102]
Length = 257
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDAETWLTAEEALSFGLIDEIL 183
>gi|255647150|gb|ACU24043.1| unknown [Glycine max]
Length = 230
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 6/95 (6%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 102 PMVAE------RFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPNKDIVMYV 155
Query: 80 NSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
NSPGG VTAGMAI+DTM+ I+P +ST C+G AA
Sbjct: 156 NSPGGSVTAGMAIFDTMRHIRPDVSTVCVGLAARP 190
>gi|217971973|ref|YP_002356724.1| peptidase S14 ClpP [Shewanella baltica OS223]
gi|217497108|gb|ACK45301.1| peptidase S14 ClpP [Shewanella baltica OS223]
Length = 669
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 2/136 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+ I+SPGG V GMAIY+ ++ + G AASM S++ A ++
Sbjct: 48 LQALGKVGTITARIHSPGGDVFEGMAIYNMIKGHPAHKVCYIDGLAASMASVIAMAFDE- 106
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P GG G A D+ ++A + K++ L Y G + +E+ L
Sbjct: 107 -VIMPENAMMMVHKPWGGTLGDAEDMRKYADLLDKVEGNLVGAYQHKTGLSEDELHALLA 165
Query: 186 RDHIMSASEACDWGVV 201
+ ++ EA + G
Sbjct: 166 AETWLTGREAVEKGFA 181
>gi|330954018|gb|EGH54278.1| peptidase S14 ClpP [Pseudomonas syringae Cit 7]
Length = 287
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K ++YINSPGG + G+AIY+ ++ PI+T +G AAS S++ AG K +
Sbjct: 66 DKPATVYINSPGGDMFEGLAIYNRLREHSQPITTKVLGLAASAASVIYMAGAKREVASS- 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G D+ A + + + ++Y + G+ ++ + +D + +
Sbjct: 125 -GFLMIHNCWTLAVGNRHDLRDVANTMEEFDAAMADLYAEGSGQAVADIAEMMDDETFIR 183
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A + G VL S E + +
Sbjct: 184 GRRAVELGFATAVLSSDEITEREDE 208
>gi|184153715|ref|YP_001842056.1| phage Clp-protease [Lactobacillus reuteri JCM 1112]
gi|227365058|ref|ZP_03849093.1| S14 family endopeptidase ClpP [Lactobacillus reuteri MM2-3]
gi|325681598|ref|ZP_08161119.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri
MM4-1A]
gi|183225059|dbj|BAG25576.1| phage clp-protease [Lactobacillus reuteri JCM 1112]
gi|227069908|gb|EEI08296.1| S14 family endopeptidase ClpP [Lactobacillus reuteri MM2-3]
gi|324979063|gb|EGC16009.1| ATP-dependent Clp protease, protease subunit [Lactobacillus reuteri
MM4-1A]
Length = 244
Score = 86.6 bits (213), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N ++I + I S GG V A IY ++ + G AAS S++ AG++
Sbjct: 39 NSDEDIEVDIASGGGSVFAASEIYTMLKAYSGKVVVNIQGLAASAASVIAMAGDEINM-- 96
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +++++H+ S G A D ++ + + + + Y G +++ + + +
Sbjct: 97 SPTSQMMIHKASTISMGNADDFAHDSKMLDVMDQSIVNAYEAKTGMDRDDILQLMANETW 156
Query: 190 MSASEACDWGVVDKV 204
M+A +A D G D +
Sbjct: 157 MTAQDAVDKGFADNI 171
>gi|167039898|ref|YP_001662883.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514]
gi|300915295|ref|ZP_07132609.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561]
gi|307724778|ref|YP_003904529.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513]
gi|166854138|gb|ABY92547.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514]
gi|300888571|gb|EFK83719.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561]
gi|307581839|gb|ADN55238.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513]
Length = 226
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 77/170 (45%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R +++ G I + + E + + +I ++INSPGG A IY+ + K
Sbjct: 16 RTLYLNGAIAEESWFEDDVTPAAFREELMSGEGDIVVWINSPGGDCIAASQIYNMLMDYK 75
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG + P + +++H P G + ++++ Q + +
Sbjct: 76 GNVTVKIDGIAASAASVIAMAGTE--VLMSPTSLMMIHNPFTIAIGDSEEMQKAIQMLDE 133
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + Y G + + +D + ++A++A + G D ++ +
Sbjct: 134 VKESIINAYELKTGLSRTRLSHLMDAETWLNANKAVELGFADDIMFKPGE 183
>gi|229110059|ref|ZP_04239636.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|228673412|gb|EEL28679.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
Length = 234
Score = 86.2 bits (212), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
I QL +E+ I NSPGG V G IY ++ + +G AAS S+
Sbjct: 8 KITKQLDNANSEDLIVSI----NSPGGYVDEGSEIYTALKNYPGHVEVQIVGLAASAASV 63
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ AG+K P A+I++H + G D+E+ A+ + R + YV GK+
Sbjct: 64 IAMAGDKVRI--SPTAKIMIHNAAKWHGGDHRDMEKAAEMLKITDRAIVNAYVIKSGKSE 121
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVL 205
EE+ + + M +A + D+++
Sbjct: 122 EELLNMMAEETWMGPQQALENNFADEIM 149
>gi|330989637|gb|EGH87740.1| peptidase S14 ClpP [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 280
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K ++YINSPGG + G+AIY+ ++ PI+T +G AAS S++ AG K +
Sbjct: 66 DKPATVYINSPGGDMFEGLAIYNRLREHSQPITTKVLGLAASAASVIYMAGAKREVASS- 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G D+ A + + + ++Y + G+ ++ + +D + +
Sbjct: 125 -GFLMIHNCWTLAVGNRHDLRDVANTMEEFDAAMADLYAEGSGQAVADIAEMMDDETFIR 183
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A + G VL S E + +
Sbjct: 184 GRRAVELGFATAVLSSDEITEREDE 208
>gi|260587185|ref|ZP_05853098.1| ClpP protease family protein [Blautia hansenii DSM 20583]
gi|260542380|gb|EEX22949.1| ClpP protease family protein [Blautia hansenii DSM 20583]
Length = 416
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 64/150 (42%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
+ L A + I++ +NS GG + G+AI++ ++ + ++ G AAS S+++ AG
Sbjct: 68 MEDLAAVKDKGHITVKLNSCGGDLYTGIAIHNALKALSGEVNVIVEGIAASAASVIMCAG 127
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ + I D+++ + + +R + EIY G + +
Sbjct: 128 DTVTVYPGSLIMIHGVSVMLWDYMNMQDMKQLMKGMDASERAVAEIYNSKTGIEVDTLRS 187
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ + EA + G D + D E
Sbjct: 188 MMTKETWFTGREALEKGFADAIKEDEDDPE 217
>gi|256849988|ref|ZP_05555419.1| Clp protease [Lactobacillus crispatus MV-1A-US]
gi|262046764|ref|ZP_06019724.1| Clp protease [Lactobacillus crispatus MV-3A-US]
gi|256713477|gb|EEU28467.1| Clp protease [Lactobacillus crispatus MV-1A-US]
gi|260572746|gb|EEX29306.1| Clp protease [Lactobacillus crispatus MV-3A-US]
Length = 231
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 5/153 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D ++ L + ++I + INS GG V AG IY ++ + I +G A
Sbjct: 28 DSVSPSSIRDAL---NQASGQDIVVEINSRGGYVDAGSEIYTELKKYQGNIDIQIVGYAC 84
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S + AG+ P A++++H+ SGG G D+ Q + ++ + L ++Y K
Sbjct: 85 SAASWIALAGDTVEM--SPTAQLMIHRASGGADGNVDDLASAMQGLDQMDQALVDLYAKR 142
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
GK+ +EV + + ++ M+A A G VD ++
Sbjct: 143 TGKSAQEVYQLMAKESWMNAKTAVANGFVDSIM 175
>gi|228942974|ref|ZP_04105481.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228976599|ref|ZP_04137044.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228980374|ref|ZP_04140684.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228779194|gb|EEM27451.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228783116|gb|EEM31250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228816700|gb|EEM62818.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 234
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
I QL +E+ I NSPGG V G IY ++ + +G AAS S+
Sbjct: 8 KITKQLDNANSEDLIVSI----NSPGGYVDEGSEIYTALKNYPGHVEVQIVGLAASAASV 63
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ AG+K P A+I++H + G D+E+ A+ + R + YV GK+
Sbjct: 64 IAMAGDKVRI--SPTAKIMIHNAAKWHGGDHRDMEKAAEMLKITDRAIVNAYVIKSGKSE 121
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVL 205
EE+ + + M +A + D+++
Sbjct: 122 EELLNMMAEETWMGPQQALENNFADEIM 149
>gi|227485897|ref|ZP_03916213.1| peptidase S14, ClpP [Anaerococcus lactolyticus ATCC 51172]
gi|227236130|gb|EEI86145.1| peptidase S14, ClpP [Anaerococcus lactolyticus ATCC 51172]
Length = 380
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 8/165 (4%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G+I + L +LE E+ I + INS GG V A AIY ++ K
Sbjct: 37 GEINPEF---FSSDLAYLEQEDINTLI-IRINSAGGDVFAATAIYSRLKEFKAKKIVKID 92
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSG--GFSGQASDIERHAQDIVKIKRRLN 166
G AAS +++ AG++ PN +++H P A D+ ++ + + IK+ +
Sbjct: 93 GWAASAATIIAMAGDEIEI--APNGSLMIHDPLFGLEGYFNAKDLIKYIEQLETIKKSII 150
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
Y GKT EE+ + ++ + + EA D G D+++ D+
Sbjct: 151 NAYKTKTGKTEEELAQLMEAETWYTGQEAVDAGFCDRLMFEEADV 195
>gi|257439336|ref|ZP_05615091.1| ClpP protease family protein [Faecalibacterium prausnitzii A2-165]
gi|283798244|ref|ZP_06347397.1| ClpP protease family protein [Clostridium sp. M62/1]
gi|257198211|gb|EEU96495.1| ClpP protease family protein [Faecalibacterium prausnitzii A2-165]
gi|291074025|gb|EFE11389.1| ClpP protease family protein [Clostridium sp. M62/1]
Length = 416
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 30/150 (20%), Positives = 64/150 (42%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
+ L A + I++ +NS GG + G+AI++ ++ + ++ G AAS S+++ AG
Sbjct: 68 MEDLAAVKDKGHITVKLNSCGGDLYTGIAIHNALKALSGEVNVIVEGIAASAASVIMCAG 127
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ + I D+++ + + +R + EIY G + +
Sbjct: 128 DTVTVYPGSLIMIHGVSVMLWDYMNMQDMKQLMKGMDASERAVAEIYNSKTGIEVDTLRS 187
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ + EA + G D + D E
Sbjct: 188 MMTKETWFTGREALEKGFADAIKEDEDDPE 217
>gi|167757874|ref|ZP_02430001.1| hypothetical protein CLOSCI_00205 [Clostridium scindens ATCC 35704]
gi|167664528|gb|EDS08658.1| hypothetical protein CLOSCI_00205 [Clostridium scindens ATCC 35704]
Length = 199
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 3/143 (2%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I+++INSPGG A IY+ + ++ G AAS S++ AG K P +
Sbjct: 6 DITVWINSPGGDCVAAAQIYNMLMDYPHNVTVKIDGIAASAASVIAMAGTK--VLVSPVS 63
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H P G +++++ + +K + Y G + ++ +D + M A+
Sbjct: 64 MMMIHNPMTVAMGDTAEMQKAIDMLGSVKDSIINAYEIKTGLSRAKLSHLMDAETWMDAN 123
Query: 194 EACDWGVVDKVLMSRIDIEEKSK 216
+A + G D++L R D+ E +
Sbjct: 124 KAVELGFADEIL-KRSDVLEDME 145
>gi|262047939|ref|ZP_06020882.1| phage Clp-protease [Lactobacillus crispatus MV-3A-US]
gi|260571752|gb|EEX28330.1| phage Clp-protease [Lactobacillus crispatus MV-3A-US]
Length = 241
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ ++I+L INSPGG + AG +Y ++ ++ +GQA S S + A +K
Sbjct: 43 NDANGQDITLEINSPGGYIDAGSEMYTDLKKYPGNVTAQVVGQACSAASWIALAADKVEM 102
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A++++H+ S G G D+ Q + + + ++Y K G +E+ + +
Sbjct: 103 --SPTAQMMIHRVSVGVEGNVDDLTSALQSLDSMDQTYVDLYSKRTGLDKQEIYRMMCAT 160
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
M+A +A D G D ++
Sbjct: 161 TWMNAKQAVDKGFADSIMFENDQAP 185
>gi|308756016|gb|ADO51062.1| ATP-dependent Clp protease subunit [Lactobacillus acidophilus]
Length = 223
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 78/174 (44%), Gaps = 4/174 (2%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R + ++G I + + I Q+ E Q I L++NSPGG TA IY +
Sbjct: 13 QRQLSISGVIAPDSWVNDDISPQVFQDELNEDQGPIDLWLNSPGGDCTAASRIYTMLMNY 72
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG P A +++H P GQ D+++ AQ +
Sbjct: 73 PNDVNVKVDGIAASAASVIAMAGT--TVSMAPTAMLMIHNPLTIVGGQKKDLDQAAQMLT 130
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ K + Y ++ +D + M+ ++A + G D++L ++ +
Sbjct: 131 ETKESIVNAYELKTNLPRAKISTMMDNETWMNVNKAIELGFADEMLGQNKNVTD 184
>gi|237803723|ref|ZP_04591308.1| peptidase S14 ClpP [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331025705|gb|EGI05761.1| peptidase S14 ClpP [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 280
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 68/145 (46%), Gaps = 2/145 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K ++YINSPGG + G+AIY+ ++ PI+T +G AAS S++ AG K +
Sbjct: 66 DKPATVYINSPGGDMFEGLAIYNRLREHSQPITTKVLGLAASAASVIYMAGAKREVASS- 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G D+ A + + + ++Y + G+ ++ + +D + +
Sbjct: 125 -GFLMIHNCWTLAVGNRHDLRDVANTMEEFDAAMADLYAEGSGQAVADIAEMMDDETFIR 183
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A + G VL S E + +
Sbjct: 184 GRRAVELGFATAVLSSDEITEREDE 208
>gi|228959905|ref|ZP_04121572.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228799786|gb|EEM46736.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 260
Score = 86.2 bits (212), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 41 NGDDLIVLINSPGGYVHEGSEIYTALKNYPGNVEVQIVGLAASAASVIAMAGDKVRI--S 98
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ EE+ + + M
Sbjct: 99 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWM 158
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 159 GPQQALENNFVDEIM 173
>gi|315654944|ref|ZP_07907849.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
gi|315490905|gb|EFU80525.1| conserved hypothetical protein [Mobiluncus curtisii ATCC 51333]
Length = 288
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 4/167 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
ER++ + G I + I L E +++++NSPGG V A IY+ +
Sbjct: 21 ERVLRINGVIAEESWLDDDITPTLFASELNAGSGPVTIWLNSPGGDVVAAARIYNMLLDY 80
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S+ A P + +++H P+ G +++ R +
Sbjct: 81 PGKVTVNIDGIAASAASV--IAMAASTVAMSPVSMLMIHNPATLAMGDKTELSRALDMLE 138
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+K + Y G + ++ K +D + M A A D G D++L
Sbjct: 139 SVKDSIINAYQLKTGLSRAKLSKLMDAETWMDARAAIDLGFADELLN 185
>gi|307271305|ref|ZP_07552584.1| Clp protease [Enterococcus faecalis TX0855]
gi|306512054|gb|EFM81045.1| Clp protease [Enterococcus faecalis TX0855]
Length = 254
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 34/140 (24%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG K
Sbjct: 40 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAGNKVAI--S 96
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D++ +
Sbjct: 97 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKETWL 156
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 157 TAEEAVENGFADEIMFENTE 176
>gi|326941533|gb|AEA17429.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 258
Score = 85.8 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 6/156 (3%)
Query: 50 QIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
+++ I QL +E+ I NSPGG V G IY ++ + +G
Sbjct: 24 EMDATSPGKITKQLDNANSEDLIVSI----NSPGGYVDEGSEIYTALKNYPGHVEVQIVG 79
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS S++ AG+K P A+I++H + G D+E+ A+ + R + Y
Sbjct: 80 LAASAASVIAMAGDKVRI--SPTAKIMIHNAAKWHGGDHRDMEKAAEMLKITDRAIVNAY 137
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
V GK+ EE+ + + M +A + D+++
Sbjct: 138 VIKSGKSEEELLNMMAEETWMGPQQALENNFADEIM 173
>gi|265750850|ref|ZP_06086913.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|315921429|ref|ZP_07917669.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|263237746|gb|EEZ23196.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
gi|313695304|gb|EFS32139.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 339
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 45 VFVTGQI---EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I +D++ + A+ L LEAE ++ + INS GG V +G+AI++ ++ K
Sbjct: 10 ILLYGDIGEYDDNVRSGDIAREL-LEAEALTGKVDVRINSNGGEVYSGIAIFNALKNSKA 68
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AASM S++ G+ AR++LH GG G +++ ++I +
Sbjct: 69 DITIYVDGIAASMASVIALCGKPVQM--SRYARLMLHSVQGGCYGNKDEMKDCIREIEAL 126
Query: 162 KRRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L E+Y GK EE+ D +DH + A EA G++D + + E+
Sbjct: 127 EDTLCEMYATRMGKDKEEIRAMYFDGKDHWLRADEALALGLIDGIYDADPVPEDS 181
>gi|254474347|ref|ZP_05087733.1| peptidase S14, ClpP [Ruegeria sp. R11]
gi|214028590|gb|EEB69425.1| peptidase S14, ClpP [Ruegeria sp. R11]
Length = 377
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 2/142 (1%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
L LE +I++ +NS GG G+AIY+ ++ ++ G AAS SL+
Sbjct: 28 IDVLEALEELGDDADITVRVNSGGGYTDQGIAIYNALKAHGGEVTVVVDGVAASAASLIS 87
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE 179
AG+ A ++LH PSG SG A +I + + +I + IY + G ++
Sbjct: 88 MAGD--QIIMRRGATMMLHDPSGFASGMADEIAIAVRALDRIGAVMASIYAEQSGDDPDD 145
Query: 180 VEKTLDRDHIMSASEACDWGVV 201
+ K + + ++ EA G
Sbjct: 146 LRKEMKAELWLTGEEAVKRGFA 167
>gi|297585273|ref|YP_003701053.1| peptidase S14 ClpP [Bacillus selenitireducens MLS10]
gi|297143730|gb|ADI00488.1| peptidase S14 ClpP [Bacillus selenitireducens MLS10]
Length = 226
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 4/173 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + G I + + + + +I+++INSPGG V A IY+ +
Sbjct: 14 RTLHLDGVIAEETWFGDEVTPAAFKEDLMADKGDITVWINSPGGDVFAASQIYNMLMEYP 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG K P + +++H P G +++++R + + +
Sbjct: 74 GQVTVKIDGVAASAASVIAMAGTK--VLMGPTSLMMIHNPMTMAIGDSTEMKRAMEMLRE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+K + Y + K +D + +A +A + G D+VL + + E
Sbjct: 132 VKESIMNAYELRTELPRNRLAKLMDDESWFNAKKAVELGFADEVLFTGEESSE 184
>gi|254884002|ref|ZP_05256712.1| clp protease [Bacteroides sp. 4_3_47FAA]
gi|260173155|ref|ZP_05759567.1| peptidase S14, ClpP [Bacteroides sp. D2]
gi|294778504|ref|ZP_06743927.1| Clp protease [Bacteroides vulgatus PC510]
gi|319640506|ref|ZP_07995227.1| hypothetical protein HMPREF9011_00824 [Bacteroides sp. 3_1_40A]
gi|254836795|gb|EET17104.1| clp protease [Bacteroides sp. 4_3_47FAA]
gi|294447766|gb|EFG16343.1| Clp protease [Bacteroides vulgatus PC510]
gi|317387884|gb|EFV68742.1| hypothetical protein HMPREF9011_00824 [Bacteroides sp. 3_1_40A]
Length = 345
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 90/175 (51%), Gaps = 8/175 (4%)
Query: 45 VFVTGQI---EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I +D++ + A+ L LEAE ++ + INS GG V +G+AI++ ++ K
Sbjct: 16 ILLYGDIGEYDDNVRSGDIAREL-LEAEALTGKVDVRINSNGGEVYSGIAIFNALKNSKA 74
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AASM S++ G+ AR++LH GG G +++ ++I +
Sbjct: 75 DITIYVDGIAASMASVIALCGKPVQM--SRYARLMLHSVQGGCYGNKDEMKDCIREIEAL 132
Query: 162 KRRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L E+Y GK EE+ D +DH + A EA G++D + + E+
Sbjct: 133 EDTLCEMYATRMGKDKEEIRAMYFDGKDHWLRADEALALGLIDGIYDADPVPEDS 187
>gi|298386342|ref|ZP_06995898.1| protease [Bacteroides sp. 1_1_14]
gi|298260719|gb|EFI03587.1| protease [Bacteroides sp. 1_1_14]
Length = 358
Score = 85.8 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 52/167 (31%), Positives = 83/167 (49%), Gaps = 8/167 (4%)
Query: 45 VFVTGQIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I D+ + A+ L LEAE I + INS GG V AG+AI++ ++ K
Sbjct: 30 ILLYGDIGDYDGNVRSGDIAREL-LEAEALSGRIDVRINSNGGEVYAGIAIFNALKNSKA 88
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AASM S++ G+ AR++LH GG G ++ ++I +
Sbjct: 89 DITIYVDGIAASMASVIALCGKPVQM--SRYARLMLHSVQGGCYGNKEEMRGCIREIESL 146
Query: 162 KRRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSASEACDWGVVDKVLM 206
+ L E+Y GK EE+ D +DH + A EA G++D +
Sbjct: 147 EDTLCEMYAARMGKDKEEIRSLYFDGKDHWLRADEALALGLIDGIYD 193
>gi|160946055|ref|ZP_02093275.1| hypothetical protein PEPMIC_00010 [Parvimonas micra ATCC 33270]
gi|158447859|gb|EDP24854.1| hypothetical protein PEPMIC_00010 [Parvimonas micra ATCC 33270]
Length = 170
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+ G+AI + ++ K ++ + G AAS+ S++ +G+ F NA +++H P
Sbjct: 1 MFDGIAIGNMIKQHKAQVNCYIDGVAASIASVIAMSGDA--IFMPSNAMLMVHNPWSFAY 58
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G ASD + A ++ I + + Y++ G E + + +D + MSA EA ++G+ D+
Sbjct: 59 GNASDFRKQADNLDHIADSIKQTYLEKAGDKLDLETITQLMDAETWMSAQEAFEYGLCDQ 118
Query: 204 VLM 206
VL
Sbjct: 119 VLS 121
>gi|221195242|ref|ZP_03568298.1| ATP-dependent Clp protease proteolytic subunit [Atopobium rimae
ATCC 49626]
gi|221185145|gb|EEE17536.1| ATP-dependent Clp protease proteolytic subunit [Atopobium rimae
ATCC 49626]
Length = 260
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
I L L + K + ++INS GG V G+AIY+ ++ + T C G A S+ S+
Sbjct: 49 DIVKALSELS--DDVKTVEVHINSYGGEVMQGVAIYNALRDCGREVVTVCDGFACSIASV 106
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ AG + R P + ++LH P G A D+ + A + I Y+
Sbjct: 107 IFMAGSR--RIMRPASLLMLHNPWVSARGNAQDLRKQADTLDTIAELSKTAYMTGTSLDR 164
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
E ++ +D + +S +A +WG+ +V S+
Sbjct: 165 ETLDAVMDAETWVSPEQALEWGLATEVSGSKE 196
>gi|49483694|ref|YP_040918.1| phage protease [Staphylococcus aureus subsp. aureus MRSA252]
gi|49241823|emb|CAG40515.1| phage protease [Staphylococcus aureus subsp. aureus MRSA252]
Length = 257
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 20 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 76
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 77 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 134
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 135 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDTETWLTAEEALSFGLIDEIL 183
>gi|254195020|ref|ZP_04901449.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|254195945|ref|ZP_04902371.1| Clp protease [Burkholderia pseudomallei S13]
gi|254197217|ref|ZP_04903639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169651768|gb|EDS84461.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
gi|169652690|gb|EDS85383.1| Clp protease [Burkholderia pseudomallei S13]
gi|169653958|gb|EDS86651.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
pseudomallei S13]
Length = 366
Score = 85.5 bits (210), Expect = 4e-15, Method: Composition-based stats.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 4/149 (2%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMG 115
A +QL A I++ INS GG V AIY+ ++ + G AAS
Sbjct: 37 AQNFVSQLDA--AAADASSITVAINSMGGDVFDAFAIYNALRRYAGKVKGRVDGIAASAA 94
Query: 116 SLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGK 175
SL+L A ++ NA +++H P +G++ D+ R A+ + + YV+ G
Sbjct: 95 SLVLMACDEIEM--PENALLMIHHPHTVAAGESKDLRRVAELLDNASAGILAAYVQRSGL 152
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ ++V +D + ++A++A + G D +
Sbjct: 153 SEDDVRAMMDAETWLTAAQAKEKGFCDVI 181
>gi|150391721|ref|YP_001321770.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF]
gi|149951583|gb|ABR50111.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF]
Length = 232
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 76/176 (43%), Gaps = 7/176 (3%)
Query: 43 RIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R +++ G I + + + E + +I +++NSPGG A IY + K
Sbjct: 16 RTLYLDGVIAEDSWFDDDVTPKAFKAELTAGEGDIVIWLNSPGGDCIAASQIYAMLMDYK 75
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG P A +++H P G + ++++ + +
Sbjct: 76 GTVTVKIDGIAASAASVIAMAGT--TVLMAPTALMMVHNPLTVAIGDSEEMKKAIAMLSE 133
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM---SRIDIEE 213
+K + Y G++ ++ +D + ++ +A + G D +L R E+
Sbjct: 134 VKESIINAYEIKTGQSRTKLSHLMDAETWLNGKKAIELGFADGILEDEKKRNQTED 189
>gi|257078066|ref|ZP_05572427.1| phage protein [Enterococcus faecalis JH1]
gi|256986096|gb|EEU73398.1| phage protein [Enterococcus faecalis JH1]
Length = 253
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N +++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 38 NHNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAG--NTVAI 94
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +I++H + G G +++ ++ + K + L YV GK EE+ +D++
Sbjct: 95 SPVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKETW 154
Query: 190 MSASEACDWGVVDKVLMSRID 210
++A EA + G D+++ +
Sbjct: 155 LTAEEAVENGFADEIMFENTE 175
>gi|85716877|ref|ZP_01047842.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
gi|85696257|gb|EAQ34150.1| peptidase S14, ClpP [Nitrobacter sp. Nb-311A]
Length = 283
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 9/160 (5%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
V+ G + A I A L + ++I++ INSPGG + G++IY+ ++ ++
Sbjct: 55 VWSGGGV---TANRISAALRSI----GNRDITVRINSPGGDMFEGISIYNMLRGHPAKVT 107
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+G AAS S++ AG++ +++H G G D+ A
Sbjct: 108 IEVIGWAASAASIIAMAGDEIRMGLG--TFMMVHNAWGAVVGNRHDMRETADMFDGFDAA 165
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +IY G +EK +D + M SEA G D V
Sbjct: 166 IADIYEARTGMKRASIEKLMDAETFMGPSEAVKNGFADVV 205
>gi|119898161|ref|YP_933374.1| endopeptidase Clp [Azoarcus sp. BH72]
gi|119670574|emb|CAL94487.1| Endopeptidase Clp [Azoarcus sp. BH72]
Length = 625
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 76/159 (47%), Gaps = 7/159 (4%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G+I D A I A+L A + + INS GG V AG+ IY+ ++ +P ++
Sbjct: 6 IIGEITDVTAREILAEL----ALAGDSPVVVRINSQGGSVQAGVTIYEALKAHRPSVTVE 61
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
+G A S SL+ AG P + +++H P +G AS++ A + + R +
Sbjct: 62 IVGWALSAASLIAMAGRPVRM--APTSLLMVHAPWTSATGNASELRDTAAALDAVARSMR 119
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ + + ++ L +H +A EA G+ D+++
Sbjct: 120 AAFS-RTKQPPKTIDAWLTGEHWFTAEEAIAAGLADELI 157
>gi|292491118|ref|YP_003526557.1| peptidase S14 ClpP [Nitrosococcus halophilus Nc4]
gi|291579713|gb|ADE14170.1| peptidase S14 ClpP [Nitrosococcus halophilus Nc4]
Length = 785
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 48/167 (28%), Positives = 77/167 (46%), Gaps = 13/167 (7%)
Query: 45 VFVTGQI---EDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+++ G I ++ A L LEA + I+ INS GG V G+AI++ +
Sbjct: 38 IYIYGDIGGWDEESIDARRFVQDLASLEA----RLITARINSIGGSVYDGLAIHNALVRH 93
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++T G AAS+ SL+ AGE+ R NA +++H P G + + R A +
Sbjct: 94 PAQVTTTIDGIAASIASLIAMAGEE--RTMASNALLMVHAPWTLAIGNSEEFRRMADMLD 151
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLD--RDHIMSASEACDWGVVDKV 204
K + Y + G++ E++ L DH +A EA G V V
Sbjct: 152 KHSEAMTAAYAEATGQSAEDILALLTDGEDHYYTAEEAQALGFVHSV 198
>gi|229083044|ref|ZP_04215449.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|228700261|gb|EEL52842.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
Length = 234
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ A +K
Sbjct: 17 NGDDLVVSINSPGGYVHEGSEIYTALKNYPGHVEVQIVGLAASAASVIAMAADKVRI--S 74
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+ + A+ + R + YV GK+ EE+ + + M
Sbjct: 75 PTAQIMIHNASMWNGGDHRDMSKAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWM 134
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 135 GPQQALENNFVDEIM 149
>gi|296503172|ref|YP_003664872.1| phage protein [Bacillus thuringiensis BMB171]
gi|296324224|gb|ADH07152.1| phage protein [Bacillus thuringiensis BMB171]
Length = 260
Score = 85.5 bits (210), Expect = 5e-15, Method: Composition-based stats.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 41 NGDDLIVSINSPGGYVHEGSEIYTALKSYPGHVEVQIVGLAASAASVIAMAGDKVRI--S 98
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ EE+ + + M
Sbjct: 99 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEEELLHMMAEETWM 158
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 159 GPQQALENNFVDEIM 173
>gi|295428018|ref|ZP_06820650.1| phage protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|295128376|gb|EFG58010.1| phage protease [Staphylococcus aureus subsp. aureus EMRSA16]
Length = 261
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 13/169 (7%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+F+ G I D AT +L L EI ++INS GG V G AIY+ ++
Sbjct: 24 IFIYGDIVSDKWFESDVTATDFKNKLDEL---GDISEIDVHINSSGGSVFEGHAIYNMLK 80
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ + AAS+ S++ +G+ N+ +++H G A ++ + A
Sbjct: 81 MHPAKINIYVDALAASIASVIAMSGDTIFMH--KNSFLMIHNSWVMTVGNAEELRKTADL 138
Query: 158 IVKIKRRLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ K N Y+ E +++ LD + ++A EA +G++D++L
Sbjct: 139 LEKTDAVSNSAYLDKAKDLDQEHLKQMLDTETWLTAEEALSFGLIDEIL 187
>gi|228905162|ref|ZP_04069169.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228854484|gb|EEM99135.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
Length = 233
Score = 85.1 bits (209), Expect = 5e-15, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 17 NGDDLIVSINSPGGYVHEGSEIYTALKNYPGNVEVQIVGLAASAASVIAMAGDKVQI--S 74
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ +E+ + + M
Sbjct: 75 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEKELLNMMAEETWM 134
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 135 GPQQALENNFVDEIM 149
>gi|228922537|ref|ZP_04085838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837132|gb|EEM82472.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 233
Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 17 NGDDLIVSINSPGGYVHEGSEIYTALKNYPGNVEVQIVGLAASAASVIAMAGDKVRI--S 74
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ +E+ + + M
Sbjct: 75 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEKELLNMMAEETWM 134
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 135 GPQQALENNFVDEIM 149
>gi|296110489|ref|YP_003620870.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii
IMSNU 11154]
gi|295832020|gb|ADG39901.1| ATP-dependent Clp protease proteolytic subunit [Leuconostoc kimchii
IMSNU 11154]
Length = 229
Score = 85.1 bits (209), Expect = 6e-15, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 65/137 (47%), Gaps = 2/137 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ ++ + INS GG V A IY ++ + + A S S++ AG+
Sbjct: 38 DDGSDLEIAINSGGGEVDAANEIYTGLRNYQGRVIIQVESSAYSAASIIAMAGDTVQI-- 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A++++H S G +D+++ + + + + + Y G+ +E +D++
Sbjct: 96 SPVAQLMIHNASTYAGGNHNDLDKTSNALKSTDKAIAKAYAVKTGRPVDEFLAMMDKETW 155
Query: 190 MSASEACDWGVVDKVLM 206
++A +A + G+ D+++
Sbjct: 156 INADDAIELGLADEIMT 172
>gi|116618740|ref|YP_819111.1| protease subunit of ATP-dependent Clp protease [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
gi|116097587|gb|ABJ62738.1| Protease subunit of ATP-dependent Clp protease [Leuconostoc
mesenteroides subsp. mesenteroides ATCC 8293]
Length = 229
Score = 85.1 bits (209), Expect = 7e-15, Method: Composition-based stats.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 2/137 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++ + INS GG V A IY ++ + T A S S++ AG+ P A
Sbjct: 42 DLEIGINSGGGEVDAANEIYTALRNYPGKVITQIESSAYSAASIIAMAGDTVQI--SPVA 99
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++++H S G +D+++ + + + + + Y G+ +E +D++ ++A
Sbjct: 100 QLMIHNASTYAGGNHNDLDKTSNALKSTDKAIAKAYSVKTGRPVDEFLALMDKETWINAD 159
Query: 194 EACDWGVVDKVLMSRID 210
+A + G+VD+V+ +
Sbjct: 160 DALELGLVDEVMTFEKE 176
>gi|13477031|ref|NP_108601.1| ClpP protease [Mesorhizobium loti MAFF303099]
gi|14027794|dbj|BAB54387.1| mlr8523 [Mesorhizobium loti MAFF303099]
Length = 281
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+I + INSPGG + G+AIY+ ++ K +S MG AAS S++ AG++
Sbjct: 75 TNDIVVKINSPGGDMFEGIAIYNLLREHKAKVSVQVMGWAASAASIIAMAGDEISMGLG- 133
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G G D+ A + +IY G ++EK +D + M
Sbjct: 134 -TFMMVHNAWGMVVGNRHDMRDAATLFDGFDSAIADIYQARTGLARADIEKLMDAETFMG 192
Query: 192 ASEACDWGVVDKV 204
++A G DKV
Sbjct: 193 PTDAVAKGFADKV 205
>gi|303239123|ref|ZP_07325653.1| peptidase S14 ClpP [Acetivibrio cellulolyticus CD2]
gi|302593461|gb|EFL63179.1| peptidase S14 ClpP [Acetivibrio cellulolyticus CD2]
Length = 232
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 76/170 (44%), Gaps = 4/170 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R +++ G I + + + + + +I ++INSPGG A IY + K
Sbjct: 16 RTLYLDGTIAEESWFDDDVTPKAFKTDLIAGEGDIVIWINSPGGDCIAASQIYTMLMDYK 75
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG + P A +++H P G + ++++ + +
Sbjct: 76 GRVTVKIDGIAASAASVIAMAGTE--VLMAPTALMMVHNPLTIAIGDSEEMQKAISMLDE 133
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+K + Y G++ ++ +D + ++A++A + G D +L
Sbjct: 134 VKESIINAYEIKTGQSRAKLSHLMDAETWLNANKAIELGFADGLLEDEKK 183
>gi|126461414|ref|YP_001042528.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029]
gi|126103078|gb|ABN75756.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029]
Length = 282
Score = 84.7 bits (208), Expect = 7e-15, Method: Composition-based stats.
Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 8/170 (4%)
Query: 47 VTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ D A I A L + +++ + INSPGG V G+AIY ++ K ++
Sbjct: 51 IGSDFWDEGVTAKRISAALRAI----GPRDVVVNINSPGGDVFEGLAIYSLLREHKGHVT 106
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+G AAS S++ A + +++H G +G + A +
Sbjct: 107 VKVLGLAASAASVIAMAAD--DLLIARAGFLMIHNTWVGAAGDRHALREAADLLEPFDAA 164
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L +IY G + E+ LD++ M SEA G D +L S E++
Sbjct: 165 LADIYAARSGVSAAEISAMLDKETWMGGSEAIAAGFADGLLSSDAVAEDE 214
>gi|229150843|ref|ZP_04279055.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228632632|gb|EEK89249.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
Length = 254
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ A +K
Sbjct: 35 NGDDLVVSINSPGGYVHEGSEIYTALKNYPGHVEVQIVGLAASAASVIAMAADKVRI--S 92
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+ + A+ + R + YV GK+ EE+ + + M
Sbjct: 93 PTAQIMIHNASMWNGGDYRDMSKAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWM 152
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 153 GPQQALENNFVDEIM 167
>gi|91794597|ref|YP_564248.1| peptidase S14, ClpP [Shewanella denitrificans OS217]
gi|91716599|gb|ABE56525.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
denitrificans OS217]
Length = 667
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 42/164 (25%), Positives = 69/164 (42%), Gaps = 7/164 (4%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ D A I + L A ++ YI S GG V GMAIY+ + S
Sbjct: 22 IMYGDVGWDFSAKQIASD---LRAMGKITQLKAYIQSGGGDVMDGMAIYNILARWPCQKS 78
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
AASM S++ A + NA +++H GG G A D+ +A + K +
Sbjct: 79 ICIESVAASMASVICMAFD--TVIMPSNAFLMIHSNWGGAVGTADDLREYADLLDKWRSS 136
Query: 165 LNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + Y + E++ + D ++A EA G+ D+V+
Sbjct: 137 MGKAYQDKAAGKLSDEQLAQFFKEDTWLTAQEAVALGLADEVIE 180
>gi|229191943|ref|ZP_04318913.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228591494|gb|EEK49343.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
Length = 233
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 17 NGDDLIVSINSPGGYVHEGSEIYTALKNYPGNVEVQIVGLAASAASVIAMAGDKVRI--S 74
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ +E+ + + M
Sbjct: 75 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEKELLNMMAEETWM 134
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 135 RPQQALENNFVDEIM 149
>gi|288957681|ref|YP_003448022.1| Clp protease [Azospirillum sp. B510]
gi|288958877|ref|YP_003449218.1| ATP-dependent Clp protease [Azospirillum sp. B510]
gi|288909989|dbj|BAI71478.1| Clp protease [Azospirillum sp. B510]
gi|288911185|dbj|BAI72674.1| ATP-dependent Clp protease [Azospirillum sp. B510]
Length = 287
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 10/165 (6%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
++V G I + A ++ L I++ +NSPGGVV G+AIY + K
Sbjct: 21 IYVYGDIGGWWDGIQAEEFAKEIDAL----SVDTINVRLNSPGGVVFDGVAIYQALARHK 76
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I G AAS+ S++ AG++ + +++H+P G A + + A + +
Sbjct: 77 ANIVIHIDGIAASIASVIAMAGDEIRIAEGAH--VMIHKPWSFAIGDAEVMRKEADILDQ 134
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++ + +IY G+ + + + + A A D G D V+
Sbjct: 135 LESGIVDIYAARTGQERKALVDWVAAETWFGAQAAKDAGFADTVV 179
>gi|325276103|ref|ZP_08141914.1| peptidase S14 ClpP [Pseudomonas sp. TJI-51]
gi|324098767|gb|EGB96802.1| peptidase S14 ClpP [Pseudomonas sp. TJI-51]
Length = 291
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 2/142 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K+I++ INSPGG V G+AIY+ ++ K ++ +G AAS S + AG++
Sbjct: 75 DKDITVKINSPGGDVFEGLAIYNLLREHKGKVTVQVLGLAASAASFIAMAGDEIQIARA- 133
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H +G +D A + +I L +IY G + +D + M
Sbjct: 134 -GFMMIHNAWTIAAGDRNDFTEVADFLDQIDATLADIYSVRTGDEVSAMRALMDVETWMG 192
Query: 192 ASEACDWGVVDKVLMSRIDIEE 213
S A + G D +L S E+
Sbjct: 193 GSGAVEAGFADGLLPSDAAQED 214
>gi|148245175|ref|YP_001219868.1| ClpP-like phage protease [Clostridium kluyveri DSM 555]
gi|219684075|ref|YP_002470457.1| hypothetical protein CKR_P47 [Clostridium kluyveri NBRC 12016]
gi|146337055|gb|ABQ23666.1| predicted ClpP-like phage protease [Clostridium kluyveri DSM 555]
gi|219570583|dbj|BAH08566.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 255
Score = 84.7 bits (208), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 45 VFVTGQI----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+F+ G+I D T + L+ I+L+INSPGG V G+AI + ++ K
Sbjct: 22 IFIYGEIVSYKWDDTDTTAASFKKDLDDLGDVNTINLHINSPGGNVFEGVAIGNMLKQHK 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ + AAS+ S++ +G N+ +++H P G A D + A D+ K
Sbjct: 82 AQVNVYVDALAASIASIIAMSG--NTILMPKNSMMMIHNPLSIAWGNAKDFRKKADDLDK 139
Query: 161 IKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I + Y+ G + ++K +D D +SA +A +G+ D V
Sbjct: 140 IGLSMQTTYLNKAGDKLDQDTLQKLMDNDTWLSADDAYSYGLCDVV 185
>gi|213517391|gb|ACJ50097.1| ATP-dependent Clp protease proteolytic subunit [Chlamydomonas
reinhardtii]
Length = 524
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 81/139 (58%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E K++ + INS GG V G+ ++D +QFIK T +G AAS SL L+ G G R+
Sbjct: 343 EEESKKVFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGERY 402
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
++HQP GG +GQASDI +Q+I+KI+ + EIY + + ++ + LDRD
Sbjct: 403 VTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIYSLSTYRPRHKILRDLDRDF 462
Query: 189 IMSASEACDWGVVDKVLMS 207
++A E +G+ D++ +
Sbjct: 463 YLTAMETIYYGLADEIATN 481
Score = 42.7 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 16 LGL-VPMVV----EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ E+ + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIYCWGEELP--AQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQ 72
Sbjct: 59 RS 60
>gi|218897608|ref|YP_002446019.1| phage protein [Bacillus cereus G9842]
gi|218544209|gb|ACK96603.1| phage protein [Bacillus cereus G9842]
Length = 260
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ A +K
Sbjct: 41 NGDDLVVSINSPGGYVHEGSEIYTALKNYPGHVEVQIVGLAASAASVIAMAADKVRI--S 98
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+ + A+ + R + YV GK+ EE+ + + M
Sbjct: 99 PTAQIMIHNASMWNGGDHRDMSKAAEMLKTTDRAIVNAYVIKSGKSEEELLNMMAEETWM 158
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 159 GPQQALENNFVDEIM 173
>gi|41179009|ref|NP_958364.1| ATP-dependent Clp protease proteolytic subunit [Chlamydomonas
reinhardtii]
gi|1168976|sp|P42380|CLPP_CHLRE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|567775|gb|AAA53086.1| Clp protease [Chlamydomonas reinhardtii]
gi|28269732|tpg|DAA00910.1| TPA_inf: Clp protease proteolytic subunit [Chlamydomonas
reinhardtii]
Length = 524
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 51/139 (36%), Positives = 81/139 (58%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E K++ + INS GG V G+ ++D +QFIK T +G AAS SL L+ G G R+
Sbjct: 343 EEESKKVFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVAASAASLALAGGTIGERY 402
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
++HQP GG +GQASDI +Q+I+KI+ + EIY + + ++ + LDRD
Sbjct: 403 VTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIYSLSTYRPRHKILRDLDRDF 462
Query: 189 IMSASEACDWGVVDKVLMS 207
++A E +G+ D++ +
Sbjct: 463 YLTAMETIYYGLADEIATN 481
Score = 42.7 bits (99), Expect = 0.037, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 16 LGL-VPMVV----EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ E+ + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIYCWGEELP--AQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQ 72
Sbjct: 59 RS 60
>gi|315162197|gb|EFU06214.1| Clp protease [Enterococcus faecalis TX0645]
Length = 257
Score = 84.7 bits (208), Expect = 9e-15, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 3/141 (2%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N +++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 42 NHNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVSIV-MAGSAASIIAMAG--NTVAI 98
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +I++H + G G +++ ++ + K + L YV GK EE+ +D++
Sbjct: 99 SPVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKETW 158
Query: 190 MSASEACDWGVVDKVLMSRID 210
++A EA + G D+++ +
Sbjct: 159 LTAEEAVENGFADEIMFENTE 179
>gi|313499018|gb|ADR60384.1| Peptidase S14 ClpP [Pseudomonas putida BIRD-1]
Length = 285
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 78/145 (53%), Gaps = 2/145 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++++++YINSPGG + G+AIY+ +Q ++T +G AAS S++ AG+K +
Sbjct: 66 ERDVTVYINSPGGDMFEGIAIYNRLQEHSHEVTTKVLGMAASAASIVFLAGKKREVASS- 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
A +++H +G + + A D+ + + ++Y + G++ E++ + +D + +
Sbjct: 125 -AFLMIHNCWTWLAGNRNYLRDIANDMEEFDAAMADLYAETSGQSAEDMAELMDDETYIR 183
Query: 192 ASEACDWGVVDKVLMSRIDIEEKSK 216
A + G+ +L S E +++
Sbjct: 184 GKRAVELGLATGLLSSTEVTERETE 208
>gi|208751271|gb|ACI31244.1| ATP-dependent Clp protease proteolytic subunit [Volvox carteri]
gi|261888159|gb|ACY06014.1| ATP-dependent Clp protease proteolytic subunit [Volvox carteri f.
nagariensis]
Length = 530
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/156 (34%), Positives = 87/156 (55%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+D +L Q + E K++ + INS GG V G+ ++D +QFIK T +G A
Sbjct: 334 DDSGRSLYRRQTERVIQEEESKKVFMIINSFGGSVGNGITVHDALQFIKAGSLTLALGVA 393
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
AS SL L+ G G R+ ++HQP GG +GQASDI +Q+I+KI+ + EIY
Sbjct: 394 ASAASLALAGGTIGERYVTEGCHTMIHQPEGGLNGQASDIWIDSQEIMKIRLDVAEIYSL 453
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + ++ + LDRD ++A E +G+ D++ +
Sbjct: 454 STYRPRHKILRDLDRDFYLTAMETIYYGLADEIATN 489
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 16 LGL-VPMVV----EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ E+ + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIYCWGEELP--AQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQ 72
Sbjct: 59 RS 60
>gi|167753873|ref|ZP_02426000.1| hypothetical protein ALIPUT_02158 [Alistipes putredinis DSM 17216]
gi|167658498|gb|EDS02628.1| hypothetical protein ALIPUT_02158 [Alistipes putredinis DSM 17216]
Length = 335
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 4/142 (2%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E EI + I S GG V + IY+ + + I T C G AS +++ A +G R
Sbjct: 94 EIDAPEIVVNIRSTGGDVNDALLIYEALSSLDGHIVTRCYGYTASAATVIAQAASEGCRE 153
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+A L+H G A ++ + K RL E+Y G+T EE + ++
Sbjct: 154 ISAHALYLIHNSICTAEGNAEELATRIDLLRKTDARLAEVYAARSGRTPEEFTLLMAENN 213
Query: 189 ----IMSASEACDWGVVDKVLM 206
+S EA G+VD+++
Sbjct: 214 GSGRWLSPQEALAAGLVDRIIE 235
>gi|157325221|ref|YP_001468643.1| gp4 [Listeria phage B025]
gi|255520628|ref|ZP_05387865.1| Clp protease domain protein [Listeria monocytogenes FSL J1-175]
gi|66733227|gb|AAY53044.1| gp4 [Listeria phage B025]
Length = 249
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + + INS GG V AG IY T++ ++ +G AAS S++ AG
Sbjct: 38 DTFEPAEVVINSGGGDVYAGSEIYSTLKEYAGDVTVKIVGLAASAASVIAMAG--NTVKI 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A++++H S SG D + + + + + Y+ GK EV + ++ +
Sbjct: 96 APTAQLMIHNVSSVVSGDFRDFQHESDVLENYNKSIASAYMLKSGKAESEVLEFMNAETW 155
Query: 190 MSASEACDWGVVDKVL 205
+A +A + G VD+++
Sbjct: 156 FTAEQAKEHGFVDEIM 171
>gi|315573877|gb|EFU86068.1| Clp protease [Enterococcus faecalis TX0309B]
gi|315580361|gb|EFU92552.1| Clp protease [Enterococcus faecalis TX0309A]
Length = 254
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 68/140 (48%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG+
Sbjct: 40 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAGK--TVAIS 96
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D++ +
Sbjct: 97 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKETWL 156
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 157 TAEEAVENGFADEIMFENTE 176
>gi|255013782|ref|ZP_05285908.1| serine protease [Bacteroides sp. 2_1_7]
Length = 343
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/175 (30%), Positives = 85/175 (48%), Gaps = 9/175 (5%)
Query: 45 VFVTGQI---EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I D A I +L+ EAE K I + INS GG V G+AI++ ++ K
Sbjct: 16 ILLYGDIGEYSDVTAAAIVRELM--EAEASGKRIDVRINSNGGDVYTGIAIFNALRGSKA 73
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I + G AASM S++ G+ AR++LH SGG G +++ R +++ +
Sbjct: 74 DIHIYVDGIAASMASVIALCGKPVEM--SKYARLMLHSVSGGCYGNKTELRRCLEEVEAL 131
Query: 162 KRRLNEIYVKNCGKTYEEVEKTL--DRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L E+Y G + EE+ D DH + A EA G +D V + E+
Sbjct: 132 ENTLCEMYAPRLGTSVEEIRARYFDDADHWLKADEALALGFIDGVYDADPVPEDS 186
>gi|110804048|ref|YP_699942.1| putative endopeptidase [Clostridium phage phiSM101]
gi|110684549|gb|ABG87916.1| putative endopeptidase [Clostridium phage phiSM101]
Length = 243
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
+ +++ + INS GG V G IY ++ + +G AAS S++ G+K
Sbjct: 37 NSVQQGEQLEVIINSNGGYVDEGSEIYTLLKDYNGEVVIKIVGMAASAASVIAMGGDKVK 96
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
P RI++H +GG G +E A+ + + Y G + EE+ +++
Sbjct: 97 I--SPTGRIMIHNAAGGVCGDYRQMEHGAEVLKDCNEAIANAYALKTGMSKEELLDLMNK 154
Query: 187 DHIMSASEACDWGVVDKVL 205
+ M+A +A G VD+++
Sbjct: 155 ETFMNAQKAKQLGFVDEIM 173
>gi|323345140|ref|ZP_08085364.1| ATP-dependent Clp protease, protease subunit [Prevotella oralis
ATCC 33269]
gi|323094410|gb|EFZ36987.1| ATP-dependent Clp protease, protease subunit [Prevotella oralis
ATCC 33269]
Length = 352
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 57/175 (32%), Positives = 92/175 (52%), Gaps = 9/175 (5%)
Query: 45 VFVTGQI---EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G+I ED +T I +L L+AE K I + INS GG V AG+AI++ ++ K
Sbjct: 18 ILLYGEIGEYEDVRSTDITREL--LQAEATYKNIDVRINSIGGEVYAGIAIFNALKNCKA 75
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ F G AASM S++ G AR++LH P GG G S++ D+ +
Sbjct: 76 DVRIFIDGIAASMASVIALCGR--HVEMSRYARLMLHSPYGGCWGNKSEMATCISDLEAL 133
Query: 162 KRRLNEIYVKNCGKTYEEVE-KTLD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L + K G T EEV+ + D +DH ++A +A D G +D + ++ E++
Sbjct: 134 EDTLCAMCAKRIGLTEEEVKARYFDGQDHWLTAQQALDAGFIDAIYDAQPVPEDQ 188
>gi|241894905|ref|ZP_04782201.1| ATP-dependent Clp protease proteolytic subunit [Weissella
paramesenteroides ATCC 33313]
gi|241871913|gb|EER75664.1| ATP-dependent Clp protease proteolytic subunit [Weissella
paramesenteroides ATCC 33313]
Length = 242
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+ P K I++ INSPGG V G+AIY+ ++ ++ G AAS+ S++ AG+
Sbjct: 40 LKELGPVKTINMSINSPGGSVFDGIAIYNMLKKNPATVNVTVEGLAASIASVIAMAGDTL 99
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ +++H P G AS++ A + +I+ IY + G E ++ +D
Sbjct: 100 TMDTG--SMLMIHNPFTMAVGNASELREMADTLDQIRESSVNIYHEKTGIDKEAIKSVMD 157
Query: 186 RDHIMSASEACDWGVVDK 203
+ ++A EA G D+
Sbjct: 158 NETWLTADEAITAGWADQ 175
>gi|148555105|ref|YP_001262687.1| peptidase S14, ClpP [Sphingomonas wittichii RW1]
gi|148500295|gb|ABQ68549.1| peptidase S14, ClpP [Sphingomonas wittichii RW1]
Length = 688
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 14/164 (8%)
Query: 45 VFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM---Q 97
+ + G + D A I + ++ + INSPGG V G+AIY+ + +
Sbjct: 4 ILIYGIVGDSWDGLDANTIVPLI-----SAGDDDLDVRINSPGGYVMEGLAIYNAIIRER 58
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
++T G AASMGS+L AGE+ NA +++H P G A ++ R A
Sbjct: 59 GKGRKVTTHIDGLAASMGSILAMAGEE--IVMADNALLMIHNPWDCACGDAIELRRAADR 116
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
+ +++ ++ IY K G + + LD + M+A+EA +
Sbjct: 117 LDQLRDQMVGIYSKATGLEADALIPMLDAETWMTATEALALNFI 160
>gi|256843130|ref|ZP_05548618.1| ATP-dependent Clp protease, proteolytic subunit [Lactobacillus
crispatus 125-2-CHN]
gi|256614550|gb|EEU19751.1| ATP-dependent Clp protease, proteolytic subunit [Lactobacillus
crispatus 125-2-CHN]
Length = 239
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 3/167 (1%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKE-ISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ + Q++ + Q + + L I S GG V A IY + ++
Sbjct: 19 GQFFDYWGMQCVSPQMVKDSLDKAQGDEVELDIASYGGDVFAASEIYSMINQYSGKVTGV 78
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G AAS +++ A + P ++++H+ S +G + D A + R +
Sbjct: 79 IQGMAASAATIIAEACD--HLVISPAGQMMIHKASTAGAGNSDDFTHTAGVLNTTDRTIA 136
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
IY GK+ EEV + ++ ++A +A + G D+++ + +
Sbjct: 137 GIYQNRTGKSEEEVLNLMKQETYLTAKDAVEQGFADEIMKKSDKVPQ 183
>gi|268610677|ref|ZP_06144404.1| peptidase s14, clpp [Ruminococcus flavefaciens FD-1]
Length = 250
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 45 VFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+F G I + I + E ++++++NSPGG V A IY ++ K
Sbjct: 19 IF-NGPISEDTWFGDEITPAMFRNELSKVSGDLTVWLNSPGGDVFAASQIYTMLRNHKGK 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++ G AAS S++ AG++ P +++H PS G +++ + + ++K
Sbjct: 78 VTVKIDGIAASAASVVAMAGDE--TLIAPTGMLMIHNPSTVAFGNKEAMQKAIELLDEVK 135
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ Y + G + ++ + +D + ++A +A G+VD +L
Sbjct: 136 ESIINAYEEKSGLSRSKIARMMDEETWLNAKKAQSLGLVDGIL 178
>gi|297572087|ref|YP_003697861.1| peptidase S14 ClpP [Arcanobacterium haemolyticum DSM 20595]
gi|296932434|gb|ADH93242.1| peptidase S14 ClpP [Arcanobacterium haemolyticum DSM 20595]
Length = 277
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 5/177 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I + I L E +++++INSPGG V A IY+ +
Sbjct: 24 RVLRINGVIAEESWFDDDITPALFASELAAGSGDVTVWINSPGGDVVAAAQIYNMLIDYP 83
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AGE + P + +++H P+ G A ++ R +
Sbjct: 84 GHVKVCIDGIAASAASVIAMAGE--VVAMSPVSMLMIHNPATLAVGDAEELGRVIDMLAA 141
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM-SRIDIEEKSK 216
+K + Y G + ++ + +D++ M A A G D L SR + +
Sbjct: 142 VKESIINAYELKTGMSRAKLARLMDQETWMDARAAIAMGFADDYLTGSRTPPDPDDE 198
>gi|261880976|ref|ZP_06007403.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
bergensis DSM 17361]
gi|270332280|gb|EFA43066.1| ATP-dependent Clp protease proteolytic subunit [Prevotella
bergensis DSM 17361]
Length = 346
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 6/174 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G I D+ + Q+ + AE+ K I + INS GG V G+AI++ ++ K
Sbjct: 16 ILLYGDIGDNYGAVTSGQITRELMAAESAYKNIDIRINSVGGEVYTGIAIFNALRASKAN 75
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ + AR++LH SGG G D++ + + ++
Sbjct: 76 ITLYVDGVAASMASVIALCGKP--VYMSRYARLMLHSVSGGCYGNKKDLKEVLEQMESLE 133
Query: 163 RRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L ++Y + GK V+ D DH ++A EA G++D + + E+
Sbjct: 134 DTLCQMYAERLGKDAAAVKAAYFDGTDHWLTADEALSLGLIDGIYDADPVPEDS 187
>gi|330817608|ref|YP_004361313.1| hypothetical protein bgla_1g27400 [Burkholderia gladioli BSR3]
gi|327370001|gb|AEA61357.1| hypothetical protein bgla_1g27400 [Burkholderia gladioli BSR3]
Length = 366
Score = 83.9 bits (206), Expect = 1e-14, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 70/163 (42%), Gaps = 8/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G I A A+L E I + +NS GG V IY+ ++
Sbjct: 24 IRIYGDIGFWGTDAEQFAARLD--EVGPSAASIVVAVNSMGGDVFDAFTIYNLLRRYPGK 81
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ G AAS SLLL + +P NA +++H P +G ++ R A +
Sbjct: 82 TTGRVDGIAASAASLLLMGCSQ---IVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGST 138
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y + G+T + V + +D + ++A++A + G D +
Sbjct: 139 SANMLTAYAERSGQTEDTVRELMDAETWLTAAQAVELGFCDTI 181
>gi|108773081|ref|YP_635990.1| ATP-dependent Clp protease proteolytic subunit [Scenedesmus
obliquus]
gi|88696647|gb|ABD48273.1| proteolytic subunit 2 of clp protease [Scenedesmus obliquus]
Length = 537
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 53/139 (38%), Positives = 82/139 (58%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E K++ + INS GG V G+ I+D +QFIK T +G AAS SL L+ G G R+
Sbjct: 358 EEESKKVFMVINSFGGSVGNGITIHDALQFIKAGSMTLGLGVAASAASLALAGGTIGERY 417
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+++HQP GG SGQASDI +Q+I+KI+ + EIY + + ++ + LDRD
Sbjct: 418 VTEGCHVMMHQPEGGLSGQASDIWIDSQEILKIRLDVAEIYSLSTYRPRHKILRDLDRDF 477
Query: 189 IMSASEACDWGVVDKVLMS 207
++A E +G+ D++ +
Sbjct: 478 YLTAMETIYYGLADEIATN 496
Score = 41.2 bits (95), Expect = 0.090, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 46/132 (34%), Gaps = 8/132 (6%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM 90
+ DIY+ + + R+VF+ ++D + IC L+ + E+ K
Sbjct: 19 QWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMEDRSK--------ELEKKEMEN 70
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
+ + +T M +S+GS SA K ++ + I + + +
Sbjct: 71 SGLFKSSTSQRKTTTGGMQSPSSLGSNPFSASAKKKERSIEDLMISEEELAIDENNMLET 130
Query: 151 IERHAQDIVKIK 162
+ +
Sbjct: 131 HTLQKISLEWLN 142
>gi|298385899|ref|ZP_06995456.1| protease [Bacteroides sp. 1_1_14]
gi|298261127|gb|EFI03994.1| protease [Bacteroides sp. 1_1_14]
Length = 339
Score = 83.9 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 8/175 (4%)
Query: 45 VFVTGQIE---DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I D + + A+ L LEAE ++ + INS GG V +G+AI++ ++ K
Sbjct: 10 ILLYGDIGEYGDGVRSGDIAREL-LEAEALTGKVDVRINSNGGEVYSGIAIFNALKNSKA 68
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AASM S++ G+ AR++LH GG G +++ ++I +
Sbjct: 69 DITIYVDGIAASMASVIALCGKPVQM--SRYARLMLHSVQGGCYGNKDEMKDCIREIEAL 126
Query: 162 KRRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L E+Y GK EE+ D +DH + A EA G++D + + E+
Sbjct: 127 EDTLCEMYATRMGKDKEEIRAMYFDGKDHWLRADEALALGLIDGIYDADPVPEDS 181
>gi|268611147|ref|ZP_06144874.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Ruminococcus flavefaciens FD-1]
Length = 306
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 74/165 (44%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I+ I Q E +++L+INSPGG V A IY ++
Sbjct: 15 RVLRLEGPIDSDSFWGDEITPQDFRDELYAEDGDLTLWINSPGGNVFAAAEIYTMIRDYP 74
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ AAS S++ AG P A ++++ PS G A D+E+ + +
Sbjct: 75 HNVTVRIASIAASAASVIAMAGNTVQM--SPTALLMINDPSTIAFGNAKDMEKAIATLNE 132
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+K + Y G + + K + + ++A +A + G D++L
Sbjct: 133 VKESIINAYAAKTGLSRNRISKLMSDETWINAKKAVELGFADEIL 177
>gi|300933461|ref|ZP_07148717.1| peptidase S14 ClpP [Corynebacterium resistens DSM 45100]
Length = 275
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 5/178 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R++ + G I + I L E +++++INSPGG V A IY+ +
Sbjct: 23 SRVLRINGVIAEESWFDDDITPALFASELAAGSGDVTVWINSPGGDVVAAAQIYNMLIDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ G AAS S++ AGE + P + +++H P+ G A ++ R +
Sbjct: 83 PGHVRVHIDGIAASAASVIAMAGE--VVAMSPVSMLMIHNPATLAVGDADELGRAIDMLA 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM-SRIDIEEKSK 216
+K + Y G + ++ + +D++ M A A G D L SR + +
Sbjct: 141 AVKESIINAYELKTGMSRAKLARLMDQETWMDARAAISMGFADDYLTGSRTPPDPDDE 198
>gi|229828941|ref|ZP_04455010.1| hypothetical protein GCWU000342_01026 [Shuttleworthia satelles DSM
14600]
gi|229792104|gb|EEP28218.1| hypothetical protein GCWU000342_01026 [Shuttleworthia satelles DSM
14600]
Length = 224
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 5/153 (3%)
Query: 61 AQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLS 120
A L LE E +++ + INS GG V A IY +Q K + +G AAS S++
Sbjct: 40 AVLRQLE-EASGEKVDIDINSAGGNVFAASEIYAAIQGYKGDVKIHVVGLAASAASMIAC 98
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
AG+ + A++++H S +G D+ ++ + + R + E YV G + ++
Sbjct: 99 AGKSDITRT---AQMMVHNVSAYTAGDYRDMNHASEVLKQANRAIAEAYVAKSGMSEKDA 155
Query: 181 EKTLDRDHIMSASEACDWGVVDKVL-MSRIDIE 212
+D + ++A +A D+G++D++ S +IE
Sbjct: 156 LDLMDAETWITAQDAVDYGLIDEIAGESSKEIE 188
>gi|238028274|ref|YP_002912505.1| hypothetical protein bglu_1g27310 [Burkholderia glumae BGR1]
gi|237877468|gb|ACR29801.1| Hypothetical protein bglu_1g27310 [Burkholderia glumae BGR1]
Length = 366
Score = 83.5 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 8/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G I A A+L E + I + +NS GG V IY+ ++
Sbjct: 24 IRIYGDIGFWGTDAEQFAARLD--EVGSSAASIVVAVNSMGGDVFDAFTIYNLLRRYPGK 81
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ G AAS SLLL + +P NA +++H P +G ++ R A +
Sbjct: 82 TTGRVDGIAASAASLLLMGCSQ---IVMPSNAMLMIHNPHTLAAGDEGELRRLADLLGST 138
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y + G+T ++V + +D + ++A++A + G D +
Sbjct: 139 SANMLTAYAERSGQTEDKVRELMDVETWLTAAQAVELGFCDAI 181
>gi|294795017|ref|ZP_06760152.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Veillonella sp. 3_1_44]
gi|294454379|gb|EFG22753.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Veillonella sp. 3_1_44]
Length = 363
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 4/162 (2%)
Query: 47 VTGQIEDHM--ATLICAQLLFLE-AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
+ G I D I + + A ++++ INS GG V A AI++ ++ +
Sbjct: 26 LYGDISDTSWWGDEITPREFASDLASCNGNDLTMRINSGGGDVFAAQAIHNMIKAYAGKV 85
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+ G AS +++ A +K + I G S A + + A + +K+
Sbjct: 86 TAHIDGLCASAATIIACAADKVIMPRNALYMIHNPSVYLGDSFDADGLTKMANYLASVKQ 145
Query: 164 RLNEIYVKNCG-KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ +Y+ T E+V+ +D + ++A EA +G++D+V
Sbjct: 146 TIANVYLSRSDVLTSEQVKTLMDDETWLTADEAKSYGLIDEV 187
>gi|300933367|ref|ZP_07148623.1| peptidase S14 ClpP [Corynebacterium resistens DSM 45100]
Length = 277
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 4/167 (2%)
Query: 42 ERIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
R++ + G I + I L E +++++INSPGG V A IY+ +
Sbjct: 23 SRVLRINGVIAEESWFDDDITPALFASELAAGSGDVTVWINSPGGDVVAAAQIYNMLIDY 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ G AAS S++ AGE + P + +++H P+ G A ++ R +
Sbjct: 83 PGHVRVCIDGIAASAASVIAMAGE--VVAMSPVSMLMIHNPATLAVGDADELGRAIDMLA 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+K + Y G + ++ + +D++ M A A G D L
Sbjct: 141 AVKESIINAYELKTGMSRAKLARLMDQETWMDARAAIAMGFADDYLT 187
>gi|237747841|ref|ZP_04578321.1| ClpP protease [Oxalobacter formigenes OXCC13]
gi|229379203|gb|EEO29294.1| ClpP protease [Oxalobacter formigenes OXCC13]
Length = 277
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 30/128 (23%), Positives = 59/128 (46%), Gaps = 2/128 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+I + INSPGG G+AIY+ ++ K ++ + AAS S++ AG++ A
Sbjct: 75 DIVVDINSPGGNFFEGVAIYNQLREHKGKVTCRVLSLAASAASVIAMAGDE--ILMGEGA 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D+ + + + +Y G + V + +D++ +SA
Sbjct: 133 FLMIHNAWAVAVGNRHDLAEASALMTPFDDAMASLYASRSGLDKKFVSEMMDKETWLSAD 192
Query: 194 EACDWGVV 201
+A + G
Sbjct: 193 QAIEDGFA 200
>gi|149882820|ref|YP_001294799.1| Clp protease [Microbacterium phage Min1]
gi|148763451|gb|ABR10469.1| Clp protease [Microbacterium phage Min1]
Length = 399
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 3/159 (1%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAEN-PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
V++ +I + I + L E E++++INSPGG G+ I + ++ K +
Sbjct: 32 VYIYDEIGESWWGGIAPKALVDEITALDVAEMTVHINSPGGAAWDGITIMNALRAHKAQV 91
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
G AAS S++ G+ A++++H SGG G A+++E A + K+
Sbjct: 92 HVVVDGLAASAASVIAMGGDTITMNRG--AQMMIHDASGGVWGNAAEVEAVATILHKLSD 149
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
+ + Y G T E+ + + +A EA G+ D
Sbjct: 150 SIADTYAARTGGTREQWRAVMKDEAWYTAEEAVAAGLAD 188
>gi|56479550|ref|YP_161139.1| hypothetical protein ebA7261 [Aromatoleum aromaticum EbN1]
gi|56315593|emb|CAI10238.1| similar to Fels-1 prophage protease subunits of ATP-dependent
protease [Aromatoleum aromaticum EbN1]
Length = 421
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/159 (25%), Positives = 72/159 (45%), Gaps = 5/159 (3%)
Query: 49 GQIEDHMATLICAQLLF-LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
G+I D Q+ + L +I++ I S GG + G+A+++ ++ I T
Sbjct: 80 GKIGDWWEGKSIEQIDYDLANIGAVDQITVRITSFGGKLDHGLAMHNALRRHPARIITVV 139
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNE 167
G AAS GS++ AG++ +A N+ +++H + + A + + E
Sbjct: 140 EGVAASAGSIVAMAGDEIHMYA--NSTMMVHGVTLRDDEGNEVEDDDATR--ALNASIVE 195
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
Y GKT +EV + D M+A EA G D+V+
Sbjct: 196 TYSARTGKTADEVAALIATDTWMTAREALAAGFADRVIE 234
>gi|331699529|ref|YP_004335768.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190]
gi|326954218|gb|AEA27915.1| peptidase S14 ClpP [Pseudonocardia dioxanivorans CB1190]
Length = 433
Score = 83.1 bits (204), Expect = 2e-14, Method: Composition-based stats.
Identities = 36/152 (23%), Positives = 66/152 (43%), Gaps = 6/152 (3%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A + L+ +I L++NSPGG G+AI + ++ + + G AAS
Sbjct: 62 TADDFVRDVATLD----VDQIVLHLNSPGGDAFEGVAIANVLRAHRARVVVRVDGMAASA 117
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ + +++++H SG G A++IE + + L Y G
Sbjct: 118 ASVIAMAGDEVVMGIG--SQMMVHDASGYTWGNAAEIEAFLRRLNATSDSLAGTYAARAG 175
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
T E + + + EA G+ D+V
Sbjct: 176 GTVAEWRAVMQAETWYTPEEAVAAGLADRVAT 207
>gi|42391864|dbj|BAD08696.1| putative ClpP protease [Delftia acidovorans]
Length = 281
Score = 83.1 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/134 (25%), Positives = 63/134 (47%), Gaps = 2/134 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ +NSPGG GMAIY+ ++ K ++ +G AAS+ S++ AG++ +
Sbjct: 76 DVTVNLNSPGGDFFEGMAIYNLLREHKAKVTIRVLGVAASVASVIAMAGDE--ILMGDGS 133
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D+ A + + +Y G T E +DR+ + A
Sbjct: 134 FLMIHNAWAVAVGNRHDMTDTAAVLAPFDAAMAALYAHRSGITEAEAAMLMDRETWIGAQ 193
Query: 194 EACDWGVVDKVLMS 207
+A D G +L S
Sbjct: 194 QAVDDGFASGLLPS 207
>gi|256617098|ref|ZP_05473944.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
gi|256596625|gb|EEU15801.1| peptidase S14 [Enterococcus faecalis ATCC 4200]
Length = 198
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 2/130 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+++INSPGG A IY+ ++ ++ G AAS S++ AG+K P A
Sbjct: 7 ITVWINSPGGDCVAAAQIYNMLKEYSGDVTIKIDGLAASAASVIAMAGDK--VVMSPVAM 64
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H PS G D+++ + ++K + Y G + ++ +D + M A
Sbjct: 65 MMIHNPSTVAFGDRVDMQKAMAMLDEVKESIINAYEIKTGMSRTKLAHMMDAETWMDARS 124
Query: 195 ACDWGVVDKV 204
A D G D V
Sbjct: 125 AVDLGFADDV 134
>gi|257142364|ref|ZP_05590626.1| ClpP protease [Burkholderia thailandensis E264]
Length = 243
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ +NSPGG G+AIY+ ++ K ++ MG AAS S++ AG++ A
Sbjct: 39 DVAVNVNSPGGDFFEGVAIYNLLREHKAKVTINVMGLAASAASVIAMAGDE--ILMGDGA 96
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D+ A + + ++Y + G +DR+ + A
Sbjct: 97 FLMIHNAWAVAIGNRHDMTAAAATLAPFDAAMAKLYAQRAGIPEATAAAMMDRETWIGAD 156
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
+A D G L S + E +
Sbjct: 157 QAVDDGFATGKLDSASVVAETN 178
>gi|83718056|ref|YP_439243.1| ClpP protease [Burkholderia thailandensis E264]
gi|83651881|gb|ABC35945.1| ClpP protease [Burkholderia thailandensis E264]
Length = 280
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 2/142 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ +NSPGG G+AIY+ ++ K ++ MG AAS S++ AG++ A
Sbjct: 76 DVAVNVNSPGGDFFEGVAIYNLLREHKAKVTINVMGLAASAASVIAMAGDE--ILMGDGA 133
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D+ A + + ++Y + G +DR+ + A
Sbjct: 134 FLMIHNAWAVAIGNRHDMTAAAATLAPFDAAMAKLYAQRAGIPEATAAAMMDRETWIGAD 193
Query: 194 EACDWGVVDKVLMSRIDIEEKS 215
+A D G L S + E +
Sbjct: 194 QAVDDGFATGKLDSASVVAETN 215
>gi|213161814|ref|ZP_03347524.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E00-7866]
Length = 87
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 33/53 (62%), Positives = 45/53 (84%), Gaps = 2/53 (3%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIED 53
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F+TGQ+ED
Sbjct: 37 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIFLTGQVED 87
>gi|54308549|ref|YP_129569.1| protease/scaffold protein [Photobacterium profundum SS9]
gi|46912978|emb|CAG19767.1| hypothetical protease/scaffold protein [Photobacterium profundum
SS9]
Length = 267
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 60/145 (41%), Gaps = 2/145 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ I L INSPGG V A + ++ K ++ G AAS S L AG++
Sbjct: 74 DAQNIHLRINSPGGSVFAARTMEQALREHKATVTVHIDGLAASAASFLAMAGDE--IIMS 131
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
A +++H+ G A D+ A + K+ L + Y K G + +
Sbjct: 132 DGAMMMIHKAWTVSWGNADDLLAEATLLEKLDGTLAKTYAKRAGGDESTFADYMRNETWF 191
Query: 191 SASEACDWGVVDKVLMSRIDIEEKS 215
+A EA G+ D + + +++
Sbjct: 192 TAEEAVSAGLADTIYDAEPVPKKED 216
>gi|227544633|ref|ZP_03974682.1| protease subunit of ATP-dependent Clp protease [Lactobacillus
reuteri CF48-3A]
gi|256847819|ref|ZP_05553264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
coleohominis 101-4-CHN]
gi|259502590|ref|ZP_05745492.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|300909450|ref|ZP_07126911.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
gi|68160762|gb|AAY86827.1| lr0867 [Lactobacillus reuteri]
gi|227185358|gb|EEI65429.1| protease subunit of ATP-dependent Clp protease [Lactobacillus
reuteri CF48-3A]
gi|256715508|gb|EEU30484.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
coleohominis 101-4-CHN]
gi|259169405|gb|EEW53900.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|300893315|gb|EFK86674.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
Length = 223
Score = 82.8 bits (203), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 4/174 (2%)
Query: 42 ERIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+R + ++G I + + + Q+ E Q I L++NSPGG TA IY +
Sbjct: 13 QRQLAISGVIAPDSWVHDDVSPQVFQDELNESQDPIDLWLNSPGGDCTAASQIYTMLMNY 72
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
++ G AAS S++ AG P A +++H P GQ D++ AQ +
Sbjct: 73 PNEVNVKISGIAASAASVIAMAGT--TVSMAPAAMLMIHNPLTIVGGQERDLDHAAQMLA 130
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
+ K + Y E++ +D + M+ ++A + G D +L ++ +
Sbjct: 131 ETKESIINAYELKTNLPREKISTMMDNETWMNVNKAIELGFADAMLGDNKNVTD 184
>gi|187933949|ref|YP_001886447.1| peptidase S14, ClpP [Clostridium botulinum B str. Eklund 17B]
gi|187722102|gb|ACD23323.1| peptidase S14, ClpP [Clostridium botulinum B str. Eklund 17B]
Length = 247
Score = 82.4 bits (202), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 6/171 (3%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
++E + Q+ LE+ EI+LYINS GG V G+ IY+ ++ ++ +
Sbjct: 36 GEKMESETSANYIKQV--LESNQSTSEINLYINSYGGEVKEGLGIYNQLKRHPAQVNVYI 93
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNE 167
G A S+ S++ G+K NA +++H S G G A ++ + A D+ I +
Sbjct: 94 DGFACSIASVIAMVGDK--VVMGTNALMMIHHASIGCYGNAEELRKAANDVEVIDQASCS 151
Query: 168 IYVKNCGKTYEE--VEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
Y+ G+ +E +++ LD ++AS+ ++G+ D++ E ++
Sbjct: 152 SYLTKAGEKLDEATLKQLLDNQTWLNASQCLEYGLCDEIAGQEDKTIEAAQ 202
>gi|71276662|ref|ZP_00652933.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|71899159|ref|ZP_00681322.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|71162534|gb|EAO12265.1| Peptidase S14, ClpP [Xylella fastidiosa Dixon]
gi|71731017|gb|EAO33085.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
Length = 771
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 49/169 (28%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 47 VTGQIEDH------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ G I D A I AQL + I + INS GGVV+ G+AIY+ +
Sbjct: 47 LYGPIGDDFWEEGVTAASIIAQL----STVTAPLIHVRINSNGGVVSDGLAIYNALTAHP 102
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I G AAS+ SL+ AG R PN+ +++H P G G A D+ A +
Sbjct: 103 ATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLMMIHGPQTGGWGFAEDLRHTAAMLDT 160
Query: 161 IKRRLNEIYVKNCGKT-YEEVEKTLD--RDHIMSASEACDWGVVDKVLM 206
+ ++ Y G T E + + L+ DH ++A + G+ D ++
Sbjct: 161 MAAAMHTAYT--TGATHPEAIRRMLNDGHDHWLTAQDMIAAGLADTIID 207
>gi|229076635|ref|ZP_04209575.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-18]
gi|228706461|gb|EEL58694.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-18]
Length = 236
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ INSPGG V G IY ++ + +G AAS S + A K P A+I+
Sbjct: 23 VSINSPGGYVNEGSEIYTALKNYPGHVEVQIVGLAASAASFIAMAANKVRI--SPTAQIM 80
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H S G D+E+ A+ + R + YV GK+ EE+ + + M +A
Sbjct: 81 IHNASMWNGGDHRDMEKAAEMLKITDRAIVNAYVIKSGKSEEELLNMMAEETWMGPQQAL 140
Query: 197 DWGVVDKVL 205
+ VD+++
Sbjct: 141 ENNFVDEIM 149
>gi|188590464|ref|YP_001921498.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43]
gi|188500745|gb|ACD53881.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43]
Length = 263
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 35/152 (23%), Positives = 71/152 (46%), Gaps = 4/152 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + +I++++NS GG V MAI + + I+ G AAS S +L+
Sbjct: 51 LSKYSGINQINVFVNSYGGSVYEAMAIRNQLMRHSANITGIVDGFAASAASFILTGCNYV 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKT 183
++ N ++H G A+++ + A D+ KI + Y++ T E + +
Sbjct: 111 KMYS--NTMQMIHNMWMPACGNANELRKSADDLDKIMEGNRQAYLQKSNGKLTEEILIEL 168
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
L+ + ++A + +G+ D+V+ +D+E
Sbjct: 169 LENETWLTAEDCLKYGLCDEVIEESVDLEAAK 200
>gi|298290031|ref|YP_003691970.1| peptidase S14 ClpP [Starkeya novella DSM 506]
gi|296926542|gb|ADH87351.1| peptidase S14 ClpP [Starkeya novella DSM 506]
Length = 293
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 71/153 (46%), Gaps = 6/153 (3%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A + +QL + + + + INSPGG + G+AI++ ++ I+ MG AAS
Sbjct: 71 TAKKVASQLKAI----GDRPVEVQINSPGGDMFEGIAIFNVLREHPQDITVKVMGMAASA 126
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG+ + +++H G D+ A+ + + + ++Y
Sbjct: 127 ASIIAMAGD--HVEMGAASFLMIHNCWVLAIGNRHDMRETAEWLEPFDQAMVDLYAARTS 184
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ ++ K +D + MS S+A + G D +L S
Sbjct: 185 QKPADIAKWMDAETYMSGSQAVERGFADALLAS 217
>gi|298486633|ref|ZP_07004691.1| Prophage Clp protease-like protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|298158848|gb|EFH99910.1| Prophage Clp protease-like protein [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
Length = 199
Score = 82.4 bits (202), Expect = 4e-14, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K ++YINSPGG + G+AIY+ ++ PI+T +G AAS S++ AG K +
Sbjct: 66 DKPATVYINSPGGDMFEGLAIYNRLREHSQPITTKVLGLAASAASVIYMAGAKREVASS- 124
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G D+ A + + + ++Y + G+ ++ + +D + +
Sbjct: 125 -GFLMIHNCWTLAVGNRHDLRDVANTMEEFDAAMADLYAEGSGQAVADIAEMMDDETFIR 183
Query: 192 ASEACDWGVVDKVLM 206
A + G VL
Sbjct: 184 GRRAVELGFATAVLS 198
>gi|255646355|gb|ACU23657.1| unknown [Glycine max]
Length = 124
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/100 (44%), Positives = 69/100 (69%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ +RL +ER++F+ +++ ++ + + +++L E K++ L+INSPGG V G+AIYD
Sbjct: 23 LINRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEENKDLYLFINSPGGWVIPGIAIYD 82
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
TMQF++P + T CMG AASMGS LL+ GE R A P+A
Sbjct: 83 TMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPHAW 122
>gi|227543567|ref|ZP_03973616.1| peptidase S14, ClpP [Lactobacillus reuteri CF48-3A]
gi|300909404|ref|ZP_07126865.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
gi|77745343|gb|ABB02572.1| ATP-dependent Clp protease [Lactobacillus reuteri]
gi|227186407|gb|EEI66478.1| peptidase S14, ClpP [Lactobacillus reuteri CF48-3A]
gi|300893269|gb|EFK86628.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
reuteri SD2112]
Length = 220
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 47 VTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ G I + + + Q+ E I +++NSPGG A IY + ++
Sbjct: 18 INGTIAPDSWIDDEVSPQVFQDELNQSCGPIDVWLNSPGGDCVAASQIYTMLMSYPNDVN 77
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS S++ AG K P A +++H P +G SD+ + Q + + K
Sbjct: 78 VKIAGIAASAASVIAMAGTK--VSMAPTALMMIHNPLTIAAGNRSDMAKAIQQLDETKES 135
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ Y G ++ +D M+ ++A + G D+VL
Sbjct: 136 IINAYEIKTGLPRGKIAALMDEQTWMNPNKAIELGFADEVLN 177
>gi|332174255|gb|AEE23509.1| peptidase S14 ClpP [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 241
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 3/167 (1%)
Query: 51 IEDHMATL-ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
I+D + I A+ E + I ++INS GGVVT G+AIY+ ++ +
Sbjct: 18 IDDDIGKDGITAKKFKDELNKQRGAIEVHINSAGGVVTEGIAIYNALKAYTGKKTVIIDS 77
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AASM S++ AG+ + N +++H P G SGQA++ + A + +K + Y
Sbjct: 78 LAASMASVIAMAGD--VVQMPSNGLMMIHNPWGVSSGQATEHRKTADLLDVMKDAMLAAY 135
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ ++ + +D + M+ + G +D + S + + ++
Sbjct: 136 MLKTNLDEAQLSELMDGETWMNGEDCLKLGFIDTLSDSVTENKITAQ 182
>gi|295112635|emb|CBL31272.1| Protease subunit of ATP-dependent Clp proteases [Enterococcus sp.
7L76]
Length = 254
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 40 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAG--NTVAIS 96
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D+ +
Sbjct: 97 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKQTWL 156
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 157 TAEEAVENGFADEIMFENTE 176
>gi|307129028|ref|YP_003881044.1| Prophage Clp protease-like protein [Dickeya dadantii 3937]
gi|306526557|gb|ADM96487.1| Prophage Clp protease-like protein [Dickeya dadantii 3937]
Length = 643
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A I+L I+SPGG V G+AIY+ + I+ G AASM S++ AG++
Sbjct: 40 LKALGDISHITLNIHSPGGDVFDGIAIYNLLSKHPAKITVHIDGLAASMASVIAMAGDR- 98
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
NA +++H+P G G A+D+ +A+ + K++ L Y + GK+ EE+ L+
Sbjct: 99 -IVMPENALMMIHKPWGISGGNANDMRDYAELLDKVEHVLIPAYARKTGKSAEELAAMLE 157
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ M E G D++L
Sbjct: 158 EETWMDGRECVAQGFADELL 177
>gi|300214157|gb|ADJ78573.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
salivarius CECT 5713]
Length = 239
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 12/159 (7%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +I + I S GG V IY ++ K + G AAS S++ AG+
Sbjct: 38 EEVAEGDDIVVDIASNGGDVFVASEIYSMLKNNKSNVKVNVTGLAASAASVIAMAGD--T 95
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
P A+I++H+ G A D+ A + I + + Y G ++ + +
Sbjct: 96 VSIAPTAQIMIHKAWTNMDGNADDLNHEAGVLNNIDKSIASAYELKTGMKQSDLLQMMSN 155
Query: 187 DHIMSASEACDWGVVDKV----------LMSRIDIEEKS 215
+ ++A +A D G D++ + S DI KS
Sbjct: 156 ETWLTAQDAVDKGFADEIMFVNEDEQPVMNSMEDIPSKS 194
>gi|148807233|gb|ABR13326.1| putative ATP-dependent protease proteolytic subunit [Prunus dulcis]
Length = 111
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 44/98 (44%), Positives = 66/98 (67%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+RL +ER++F+ ++ ++ + +++L E+ K++ L+INSPGG V G+AIYDTM
Sbjct: 12 NRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDTKDLYLFINSPGGWVIPGVAIYDTM 71
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
QF++P I T CMG AASMGS +L GE R A P+A
Sbjct: 72 QFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPHAW 109
>gi|325271030|ref|ZP_08137615.1| hypothetical protein HMPREF9141_2825 [Prevotella multiformis DSM
16608]
gi|324986628|gb|EGC18626.1| hypothetical protein HMPREF9141_2825 [Prevotella multiformis DSM
16608]
Length = 348
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 52/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLF--LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G I D T+ AQ+ + AE K I + INS GG V G+AI++ ++ K
Sbjct: 18 ILLYGDIGDSYGTITSAQITRELMAAEATYKNIDVRINSIGGEVYTGIAIFNALRASKAN 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ + G AASM S++ G+ + AR++LH SGG G D++ + ++
Sbjct: 78 ITIYVDGVAASMASVIALCGKP--VYMSRYARLMLHSVSGGCYGNTRDMKDMISQMESLE 135
Query: 163 RRLNEIYVKNCGKTYEEVEK-TLD-RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L ++Y GK E++ D DH ++A EA G +D + + EE
Sbjct: 136 DTLCDMYADKLGKDKAEIKSSYFDGTDHWLTAEEAKISGFIDGIYDADPVPEES 189
>gi|229199634|ref|ZP_04326284.1| Clp protease [Bacillus cereus m1293]
gi|228583836|gb|EEK42004.1| Clp protease [Bacillus cereus m1293]
Length = 198
Score = 82.0 bits (201), Expect = 5e-14, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 2/130 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+++INSPGG V +AI++ ++ K ++ + G AAS GS++ A +K N
Sbjct: 13 INIHINSPGGDVFESIAIHNLLKNHKAKVNVYIDGLAASGGSVIAMAADK--IVMPKNTM 70
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ +G + D+ + A + KI + E Y E+E L + ++A E
Sbjct: 71 MMIHKAWTYAAGNSEDLRKVANQLEKIDTAVTESYTTRFVGEKNELETLLAEETWLTAEE 130
Query: 195 ACDWGVVDKV 204
+G D++
Sbjct: 131 CKTFGFCDEI 140
>gi|304389877|ref|ZP_07371836.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
gi|304327053|gb|EFL94292.1| ATP-dependent Clp protease proteolytic subunit [Mobiluncus curtisii
subsp. curtisii ATCC 35241]
Length = 221
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 35/166 (21%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ ++G I + + + E +++++NSPGG V A IY+ +
Sbjct: 23 RVLRISGTIAEESWFDDDVTPSIFASELNAGSGPVTIWLNSPGGDVVAAAQIYNMLIDYP 82
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ P + +++H P+ G ++ R +
Sbjct: 83 SHVTVNIDGIAASAASVIAM--AASTVAMSPVSMLMIHNPATMAVGDKDELARAMSMLDS 140
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+K + Y + G + ++ K +D + M A A D G D++L
Sbjct: 141 VKESILNAYQEKTGMSRAKLSKLMDAETWMDARAAIDMGFADELLT 186
>gi|311107208|ref|YP_003980061.1| Clp protease family protein [Achromobacter xylosoxidans A8]
gi|310761897|gb|ADP17346.1| Clp protease family protein [Achromobacter xylosoxidans A8]
Length = 279
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 3/165 (1%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G+ D + L + +++++ +NSPGG G+AIY+ ++ K ++ +
Sbjct: 52 GETWDGSGVTVKRIQAALRSV-GARDVTVNVNSPGGNFFEGVAIYNALREHKAKVTIKVL 110
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEI 168
G AAS S++ AG+ + +++H G D+ A + + ++
Sbjct: 111 GLAASAASVIAMAGD--DILMGQGSFLMIHNAWAVAIGNRHDLVDAAAKLEPFDEAMAQV 168
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
Y G T ++ +D++ + A +A + G +L IE+
Sbjct: 169 YAARTGLTSKQAAALMDKETWIGADQAVEDGFATGLLDGAAVIEQ 213
>gi|118588978|ref|ZP_01546385.1| probable Clp protease protein [Stappia aggregata IAM 12614]
gi|118438307|gb|EAV44941.1| probable Clp protease protein [Stappia aggregata IAM 12614]
Length = 347
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 37/141 (26%), Positives = 71/141 (50%), Gaps = 2/141 (1%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L L ++++ +NS GG G+AIY+ ++ K ++ AAS S++ AG
Sbjct: 30 LQALAEHGTDNDLTVLLNSGGGYAFEGIAIYNALKAHKGTVTVKIDAIAASAASVIALAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ + A + +++H PSG G ASD ++ + + K+ +++ +Y GK EV +
Sbjct: 90 DSIVMRAG--SELMIHDPSGSTYGTASDHDKTSAALNKLAEQMSSLYSARSGKDLAEVRQ 147
Query: 183 TLDRDHIMSASEACDWGVVDK 203
+ + +A EA + G D+
Sbjct: 148 IMKDETWFTAEEAVEAGFADE 168
>gi|90411695|ref|ZP_01219704.1| hypothetical ClpP family serine protease, possible phage related
[Photobacterium profundum 3TCK]
gi|90327257|gb|EAS43621.1| hypothetical ClpP family serine protease, possible phage related
[Photobacterium profundum 3TCK]
Length = 261
Score = 81.6 bits (200), Expect = 6e-14, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 2/140 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L INSPGG V A + ++ K ++ G AAS S L AG++ A
Sbjct: 72 IHLRINSPGGSVFAARTMEQALREHKATVTVHIDGLAASAASFLAMAGDE--IIIGEGAM 129
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ G A D+ A + K+ L + Y K G + + + +A E
Sbjct: 130 MMIHKAWTVSWGNADDLLAEAALLEKLDGTLAKTYAKRAGGDEKTFSDYMRNETWFTADE 189
Query: 195 ACDWGVVDKVLMSRIDIEEK 214
A G+ D V + +++
Sbjct: 190 AVAAGIADTVYDAEPAPKKE 209
>gi|54302965|ref|YP_132958.1| hypothetical protein PBPRB1287 [Photobacterium profundum SS9]
gi|46916393|emb|CAG23158.1| hypothetical ClpP family serine protease, possible phage related
[Photobacterium profundum SS9]
Length = 270
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 34/141 (24%), Positives = 58/141 (41%), Gaps = 2/141 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L INSPGG V A + ++ K ++ G AAS S L G++ A
Sbjct: 77 IHLRINSPGGSVFAARTMEQALREHKATVTVHIDGLAASAASFLAMVGDE--IIIGEGAM 134
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ G A D+ A + K+ L + Y K G + + +A E
Sbjct: 135 MMIHKAWTVSWGNADDLLAEATLLEKLDGTLAKTYAKRAGGDESTFADYMRNETWFTAEE 194
Query: 195 ACDWGVVDKVLMSRIDIEEKS 215
A G+ D + + +++
Sbjct: 195 AVTAGLADTIYDAEPAPKKED 215
>gi|326692818|ref|ZP_08229823.1| protease subunit of ATP-dependent Clp protease [Leuconostoc
argentinum KCTC 3773]
Length = 240
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 16/170 (9%)
Query: 48 TGQIEDHMA------------TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
++D A AQ+ L + ++ + I S GG V + IY
Sbjct: 9 GTVVDDETAAFYSFFGIPSASPSAVAQI--LNDGDDDDDVEVNIASNGGDVFSASEIYTM 66
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ K ++ G AAS S++ AG K P A++++HQ S G D+
Sbjct: 67 LRQSKANVTVNIQGLAASAASVIAMAGNKVNI--SPTAQLMIHQASSYGGGNKDDLAHEI 124
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ I + + Y G ++ + ++ + A EA D G D+++
Sbjct: 125 NVLDGIDKSIASAYESKTGMPQGDLLNMMAQETWIGAQEAVDKGFADEIM 174
>gi|300766160|ref|ZP_07076125.1| ClpP protease [Listeria monocytogenes FSL N1-017]
gi|300513118|gb|EFK40200.1| ClpP protease [Listeria monocytogenes FSL N1-017]
Length = 265
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 64/136 (47%), Gaps = 2/136 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N E+ ++INS GG V AG IY ++ + +G AAS S++ AG +
Sbjct: 38 NASGEVEVWINSNGGDVFAGSEIYTALKSYNGNVVVKIVGMAASAASVIAMAGNE--VLI 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P ++++H G G ++++ ++ + Y GKT EE+ + +
Sbjct: 96 SPTGQMMIHNVQYGGRGDYRELKKASEIAQNANISIANAYQLKTGKTLEELLNMMGEETW 155
Query: 190 MSASEACDWGVVDKVL 205
+++ +A + G+ D V+
Sbjct: 156 LNSQQAVELGLADGVM 171
>gi|186914928|gb|ACC95221.1| ClpP [Eudianthe laeta]
Length = 99
Score = 81.6 bits (200), Expect = 7e-14, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIY 169
AASMGS +L GE R A P+AR+++HQP+ F Q + A++++K++ L +Y
Sbjct: 2 AASMGSFILVGGEITKRLAFPHARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVY 61
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
V+ GK V + ++RD MSA+EA G+VD V
Sbjct: 62 VQRTGKPIWVVSEDMERDVFMSAAEAQAHGIVDLV 96
>gi|257421724|ref|ZP_05598714.1| predicted protein [Enterococcus faecalis X98]
gi|257163548|gb|EEU93508.1| predicted protein [Enterococcus faecalis X98]
Length = 230
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 16 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAG--NTVAIS 72
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D+ +
Sbjct: 73 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKQTWL 132
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 133 TAEEAVESGFADEIMFENTE 152
>gi|290894026|ref|ZP_06557000.1| serine protease [Listeria monocytogenes FSL J2-071]
gi|290556370|gb|EFD89910.1| serine protease [Listeria monocytogenes FSL J2-071]
Length = 235
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 42/174 (24%), Positives = 89/174 (51%), Gaps = 14/174 (8%)
Query: 45 VFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+++ G+I ED A+ L L I+L++NSPGG V G+AI + ++
Sbjct: 18 IYIYGEIVSFKWDEEDTTASSFQKDLKELGNIET---INLHVNSPGGNVFEGIAISNMIK 74
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
K + + AAS+ S++++ +K + + N+ ++H P+ SG ++++ +HA D
Sbjct: 75 AHKAKVIAYVDALAASIASVIVAGADKVVMY--ENSMQMIHNPTWNVSGNSTELRKHADD 132
Query: 158 IVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ I + Y+ G + E++++ + + +SA +A G+ D++L +
Sbjct: 133 LDAIAQASVLTYLSKAGDKLSEEKIKQIMAEETWLSAKDALGHGLCDEILEANK 186
>gi|92117911|ref|YP_577640.1| peptidase S14, ClpP [Nitrobacter hamburgensis X14]
gi|91800805|gb|ABE63180.1| peptidase S14, ClpP [Nitrobacter hamburgensis X14]
Length = 351
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L L ++++ +NS GG+V +AIY+ + K ++ AAS +++ AG
Sbjct: 30 LAALAEHGRDNDLTVRLNSGGGIVNDAIAIYNALSTHKGKVTIQVDAIAASAATVIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
++ + + +++H P G D E+ + + ++ IY + G ++V
Sbjct: 90 QEIVMRVG--SIMMIHDPMNVTFGNIEDHEKTIEQLTAYANQMASIYAERSGNELDDVRS 147
Query: 183 TLDRDHIMSASEACDWG 199
+ + ++A +A + G
Sbjct: 148 DMKAEIWLTAEQAVEKG 164
>gi|75762668|ref|ZP_00742509.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74489848|gb|EAO53223.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 227
Score = 81.2 bits (199), Expect = 8e-14, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ + INSPGG V G IY ++ + +G AAS S++ AG+K
Sbjct: 45 NGDDLIVSINSPGGYVHEGSEIYTALKNYPGNVEVQIVGLAASAASVIAMAGDKVQI--S 102
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A+I++H S G D+E+ A+ + R + YV GK+ +E+ + + M
Sbjct: 103 PTAQIMIHNASMWNGGDHRDMEKAAEMLKTTDRAIVNAYVIKSGKSEKELLNMMAEETWM 162
Query: 191 SASEACDWGVVDKVL 205
+A + VD+++
Sbjct: 163 GPQQALENNFVDEIM 177
>gi|257081786|ref|ZP_05576147.1| gp4 [Enterococcus faecalis E1Sol]
gi|256989816|gb|EEU77118.1| gp4 [Enterococcus faecalis E1Sol]
Length = 230
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 16 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAG--NTVAIS 72
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D+ +
Sbjct: 73 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKQTWL 132
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 133 TAEEAVESGFADEIMFENTE 152
>gi|294839797|ref|ZP_06784480.1| ClpP protease [Acinetobacter sp. 6013113]
gi|294860199|ref|ZP_06797968.1| ClpP protease [Acinetobacter sp. 6013150]
Length = 279
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 71/173 (41%), Gaps = 13/173 (7%)
Query: 42 ERIVFVTGQIEDH-------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ + + I A I A L + + I NSPGG V G+ IY+
Sbjct: 39 DNTISIMDPIGYDWWTETGVTAKRISAALRSMNGADVVVNI----NSPGGDVFEGLTIYN 94
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++ + ++ +G AAS S + A ++ ++H G G +D+
Sbjct: 95 LLREYEGHVTVRVLGLAASAASFIAMAADEIQIARA--GFFMIHNAWTGVWGNRNDMRET 152
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A + +I + +IY G + +E++ +D++ ++ + + G D L S
Sbjct: 153 ADFLEQIDETIADIYSIRTGLSIDELKAQMDKESWINGKNSVEQGFADSYLDS 205
>gi|115468790|ref|NP_001057994.1| Os06g0598200 [Oryza sativa Japonica Group]
gi|21327370|gb|AAM48275.1|AC122148_28 Putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|31431491|gb|AAP53264.1| ATP-dependent Clp protease proteolytic subunit, putative [Oryza
sativa Japonica Group]
gi|113596034|dbj|BAF19908.1| Os06g0598200 [Oryza sativa Japonica Group]
Length = 115
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 1/92 (1%)
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
M S +L GE R A P+ARI+LHQP+ + + + +++ K++ + +Y
Sbjct: 1 MASFILLGGEPTKRIAFPHARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALR 60
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
GK + V + ++RD MSA EA +G+VD V
Sbjct: 61 TGKPFWVVSEDMERDVFMSADEAKAYGLVDIV 92
>gi|90961265|ref|YP_535181.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage
Sal2]
gi|90820459|gb|ABD99098.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus phage
Sal2]
Length = 239
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 12/159 (7%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +I + I S GG V IY ++ + G AAS S++ AG+
Sbjct: 38 EEVAEGDDIVVDIASNGGDVFVASEIYSMLKNNASNVKVNVTGLAASAASVIAMAGD--T 95
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
P A+I++H+ G A D+ A + I + + Y G ++ + +
Sbjct: 96 VSIAPTAQIMIHKAWTNMDGNADDLNHEAGVLNNIDKSIASAYELKTGMKQSDLLQMMSN 155
Query: 187 DHIMSASEACDWGVVDKV----------LMSRIDIEEKS 215
+ ++A +A D G D++ + S DI KS
Sbjct: 156 ETWLTAQDAVDKGFADEIMFVNEDEQPVMNSMEDIPSKS 194
>gi|330975103|gb|EGH75169.1| ATP-dependent Clp protease proteolytic subunit [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 61
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 37/56 (66%)
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
HA++I+ I+ RLN + + G++ E +E+ +RD+ MSA A ++G++D V+ R
Sbjct: 3 HAKEILHIRHRLNSLLAHHTGQSLETIERDTERDNFMSAERAAEYGLIDSVINKRQ 58
>gi|331270735|ref|YP_004397329.1| caseinolytic protease (Clp) [Clostridium botulinum BKT015925]
gi|329127698|gb|AEB77639.1| caseinolytic protease (Clp) [Clostridium botulinum BKT015925]
Length = 258
Score = 81.2 bits (199), Expect = 9e-14, Method: Composition-based stats.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 14/184 (7%)
Query: 45 VFVTGQIEDHM-----------ATLICAQ-LLFLEAENPQKEISLYINSPGGVVTAGMAI 92
+++ GQI D I + + L E KEI+L+INS GG + A ++I
Sbjct: 31 IYLYGQIVDEKPVNWWTGKEEEGEFIYPENIRKLVNEAGDKEINLHINSTGGSIYASISI 90
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
++ ++ K I+ + G AAS S++ A +K F N +++H+ + G G +
Sbjct: 91 HNFLKQAKNKINVYIDGIAASGASIIAMAADK--IFMPENTTMMIHRAAVGVYGNVETLR 148
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ A + K + Y + E++ ++ + ++A+E G+ D++L + + +
Sbjct: 149 KVANTLEKFDETVLNSYKERFVGEIGELKALIEDETYLTATECKSLGLCDEILNEQPEPK 208
Query: 213 EKSK 216
+ +
Sbjct: 209 QPKQ 212
>gi|71898021|ref|ZP_00680226.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
gi|71732265|gb|EAO34320.1| Peptidase S14, ClpP [Xylella fastidiosa Ann-1]
Length = 771
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/169 (27%), Positives = 75/169 (44%), Gaps = 17/169 (10%)
Query: 47 VTGQIEDH------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ G I D A + AQL + I + INS GGVV+ G+AIY+ +
Sbjct: 47 LYGPIGDDFWEEGVTAASLIAQL----STVTAPLIHVRINSNGGVVSDGLAIYNALTAHP 102
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I G AAS+ SL+ AG R PN+ +++H P G A D+ A +
Sbjct: 103 ATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLMMIHGPQTSGWGFAEDLRHTAAMLDT 160
Query: 161 IKRRLNEIYVKNCGKT-YEEVEKTLD--RDHIMSASEACDWGVVDKVLM 206
+ ++ Y G T E + + L+ DH ++A + G+ D ++
Sbjct: 161 MAAAMHTAYT--TGATHPEAIRRMLNDGHDHWLTAQDMIAAGLADTIID 207
>gi|9633042|ref|NP_050150.1| ClpP-like protease [Lactobacillus phage phiadh]
gi|5730299|emb|CAB52520.1| ClpP-like protease [Lactobacillus phage phiadh]
Length = 242
Score = 81.2 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 36/145 (24%), Positives = 66/145 (45%), Gaps = 2/145 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
E +++L INSPGG V AG IY ++ + + GQA S S + A ++
Sbjct: 40 NEANGSDVTLEINSPGGYVDAGSEIYTALKEYQGQVIAKITGQACSAASWIALAADRIEM 99
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A++++H+ S G + D+ + + + ++Y + G +EV + +
Sbjct: 100 --SPTAQMMIHRASTISIGNSDDLASDLNALNSLDKSFVDLYSQRTGLDAQEVYRLMCNT 157
Query: 188 HIMSASEACDWGVVDKVLMSRIDIE 212
M+A EA D G D+++
Sbjct: 158 TWMNAKEAVDKGFADEIMFQNDKKP 182
>gi|224159711|ref|XP_002338112.1| predicted protein [Populus trichocarpa]
gi|222870927|gb|EEF08058.1| predicted protein [Populus trichocarpa]
Length = 99
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 43/99 (43%), Positives = 67/99 (67%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ +RL +ER++F+ I+ ++ + +++L E+ K++ L+INSPGG V G+AIYD
Sbjct: 1 LINRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEIKDLYLFINSPGGWVIPGIAIYD 60
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
TMQF++P + T CMG AASMGS +L G+ R A P+A
Sbjct: 61 TMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPHA 99
>gi|119383115|ref|YP_914171.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222]
gi|119383741|ref|YP_914797.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222]
gi|119372882|gb|ABL68475.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222]
gi|119373508|gb|ABL69101.1| peptidase S14, ClpP [Paracoccus denitrificans PD1222]
Length = 280
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
++++ + INSPGG G+AIY+T++ ++ +G AAS S++ AG++
Sbjct: 74 KRDVVVNINSPGGDFFEGLAIYNTLREHPAKVTVKILGLAASAASVIAMAGDE--VLIGR 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H +G + A + +IY G +++ + LDR+ +
Sbjct: 132 AGFLMIHNTWVVAAGDRHALREVADWLEPFDSASVDIYAARTGLDGKKLGQMLDRETWIG 191
Query: 192 ASEACDWGVVDKVL 205
A D G D +L
Sbjct: 192 GQSAVDQGFADSLL 205
>gi|75675735|ref|YP_318156.1| peptidase S14, ClpP [Nitrobacter winogradskyi Nb-255]
gi|74420605|gb|ABA04804.1| peptidase S14, ClpP [Nitrobacter winogradskyi Nb-255]
Length = 281
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++++ INSPGG + G+AIY+ ++ ++ +G AAS S++ AG++
Sbjct: 75 DRDVTVKINSPGGDMFEGIAIYNLLRGHPARVTVEVLGWAASAASIIAMAGDEIRMGLG- 133
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H G G D+ A+ + +IY G +EK +D + M
Sbjct: 134 -TFMMVHNAWGVVIGNRHDMRESAELFDGFDSAIVDIYEARTGLKRSAIEKLMDAETFMG 192
Query: 192 ASEACDWGVVDKV 204
SEA G D V
Sbjct: 193 PSEAVKNGFADLV 205
>gi|301299543|ref|ZP_07205809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
gi|300852844|gb|EFK80462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Lactobacillus
salivarius ACS-116-V-Col5a]
Length = 239
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E +I + I S GG V IY ++ + G AAS S++ AG+
Sbjct: 38 EEVAEGDDIVVDIASNGGDVFVASEIYSMLKNNASNVKVNVTGLAASAASVIAMAGD--T 95
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
P A+I++H+ G A D+ A + I + + Y G ++ + +
Sbjct: 96 VSIAPTAQIMIHKAWTNMDGNADDLNHEAGVLNNIDKSIASAYELKTGMKQSDLLQMMSN 155
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++A +A D G D+++ + E
Sbjct: 156 ETWLTAQDAVDKGFADEIMFVNEEDE 181
>gi|229199266|ref|ZP_04325935.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
gi|228584210|gb|EEK42359.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1293]
Length = 106
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 50/89 (56%), Positives = 68/89 (76%)
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAIYDTMQFIKP +ST C+G AASMG+ LL+AGEKG R+ALPN+ +++HQP GG GQA+
Sbjct: 1 MAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVMIHQPLGGAQGQAT 60
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYE 178
+IE A+ I+ ++ +LN+I G+ E
Sbjct: 61 EIEIAAKRILFLREKLNQILADRTGQPLE 89
>gi|188589670|ref|YP_001921112.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43]
gi|188499951|gb|ACD53087.1| peptidase S14, ClpP [Clostridium botulinum E3 str. Alaska E43]
Length = 377
Score = 80.8 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 65/148 (43%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L+ + I++ INS GG V AIY ++ K I+ G A S +++ AG+K
Sbjct: 43 QLDLYKDRDNITVRINSNGGDVFTASAIYTLLKDCKASITVKIDGMAMSAATVVAMAGDK 102
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
+ + I SD+E+ + +K + Y+ KT EE+E +
Sbjct: 103 VLIPSTSIFMIHDPLAGLCGYYNVSDLEKVINRLSVVKNTIINAYINKTDKTKEEIEDLM 162
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ +A + G D+V+ S D E
Sbjct: 163 TNELWLTGEDAVNEGFCDEVMFSETDNE 190
>gi|28211745|ref|NP_782689.1| phage protein [Clostridium tetani E88]
gi|28204187|gb|AAO36626.1| phage protein [Clostridium tetani E88]
Length = 226
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 2/140 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + + INS GG V AG IY ++ K ++ +G AAS S++ AG+K
Sbjct: 35 LSNSKNNEGLEVEINSGGGSVFAGSEIYTLLKDYKGNVTVKIVGLAASAASVIAMAGDK- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
P +I++H SG FSG ++E+ ++ + + ++ Y G + EE+ ++
Sbjct: 94 -VLISPTGQIMIHNASGCFSGDYRNMEKGSEILKNVNITISNAYKLKTGLSSEELLDMMN 152
Query: 186 RDHIMSASEACDWGVVDKVL 205
++ ++ A D VD+++
Sbjct: 153 KETWLTPQNALDNKFVDEIM 172
>gi|260579082|ref|ZP_05846980.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
gi|258602767|gb|EEW16046.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Corynebacterium jeikeium ATCC 43734]
Length = 255
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 4/162 (2%)
Query: 47 VTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ G I + I L E +++++INSPGG V A IY+ + +
Sbjct: 3 INGVIAEESWFDDDITPALFASELAAGSGDVTVWINSPGGDVVAAAQIYNMLLDYPGHVK 62
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS S++ AGE + P + +++H P+ G A ++ R + +K
Sbjct: 63 VCIDGIAASAASVIAMAGE--VVSMSPVSMLMIHNPATLAVGDADELGRAIDMLAAVKES 120
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ Y G + ++ + +D++ M A A G D L
Sbjct: 121 IINAYELKTGMSRAKLARLMDQETWMDARAAIAMGFADDYLT 162
>gi|255973197|ref|ZP_05423783.1| predicted protein [Enterococcus faecalis T1]
gi|255964215|gb|EET96691.1| predicted protein [Enterococcus faecalis T1]
Length = 252
Score = 80.4 bits (197), Expect = 1e-13, Method: Composition-based stats.
Identities = 33/140 (23%), Positives = 66/140 (47%), Gaps = 3/140 (2%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++ + INS GG+V G IY ++ + + + A S S++ AG
Sbjct: 38 NNEDVEVTINSNGGLVDMGNEIYTALRSYEGHVKVNIV-MAGSAASIIAMAG--NTVAIS 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P +I++H + G G +++ ++ + K + L YV GK EE+ +D+ +
Sbjct: 95 PVGQIMIHNVAMGAGGDYHTMDKASEILQKANKSLANAYVSKTGKAKEEILALMDKQTWL 154
Query: 191 SASEACDWGVVDKVLMSRID 210
+A EA + G D+++ +
Sbjct: 155 TAEEAVESGFADEIMFENTE 174
>gi|294783245|ref|ZP_06748569.1| ATP-dependent Clp protease [Fusobacterium sp. 1_1_41FAA]
gi|294480123|gb|EFG27900.1| ATP-dependent Clp protease [Fusobacterium sp. 1_1_41FAA]
Length = 344
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N I+LYINSPGG VT G AIY ++ K + + GQ +S+ S++ AG+K
Sbjct: 46 NDIDTINLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIASVIAMAGDK--IAM 103
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A +++H P +G A ++ + A + +K + YV + EE+ +D +
Sbjct: 104 SPVATMMIHNPITALAGDAIELRKTAAILDIMKDTIINAYVTKSHLSREEISALMDTETY 163
Query: 190 MSASEACDWGVVDK 203
+A +A + G +
Sbjct: 164 FTADQAIEKGFATE 177
>gi|34762173|ref|ZP_00143180.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|27888134|gb|EAA25193.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
Length = 344
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N I+LYINSPGG VT G AIY ++ K + + GQ +S+ S++ AG+K
Sbjct: 46 NDIDTINLYINSPGGSVTEGCAIYSALKRHKAVKNVYIDGQCSSIASVIAMAGDK--IAM 103
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A +++H P +G A ++ + A + +K + YV + EE+ +D +
Sbjct: 104 SPVATMMIHNPITALAGDAIELRKTAAILDIMKETIINAYVTKSHLSREEISALMDTETY 163
Query: 190 MSASEACDWGVVDK 203
+A +A + G +
Sbjct: 164 FTADQAIEKGFATE 177
>gi|254555672|ref|YP_003062089.1| Clp protease domain protein [Lactobacillus plantarum JDM1]
gi|254044599|gb|ACT61392.1| Clp protease domain protein [Lactobacillus plantarum JDM1]
Length = 247
Score = 80.4 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 66/136 (48%), Gaps = 2/136 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + + INS GG++ AG IY + + + +G AAS SL+ AG
Sbjct: 38 DDGSTVEVDINSGGGLMDAGTEIYTALMAYQGKVMVNIVGMAASSASLIAMAGNPTRI-- 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P +I++H +GG G D + ++ + + + Y G + E+++ +D +
Sbjct: 96 SPVGQIMIHNVAGGLRGDYRDQAKLSEILKQSSEAIANAYHLKTGLSMEDLQAKMDSETY 155
Query: 190 MSASEACDWGVVDKVL 205
++A +A + G VD+++
Sbjct: 156 LNADQAKELGFVDEIM 171
>gi|213621477|ref|ZP_03374260.1| hypothetical protein SentesTyp_29737 [Salmonella enterica subsp.
enterica serovar Typhi str. E98-2068]
Length = 51
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+K+K R+NE+ + G++ E++E+ +RD +SA EA ++G+VD +L R
Sbjct: 1 MKVKGRMNELMAHHTGQSLEQIERDTERDRFLSAPEAVEYGLVDSILTHRN 51
>gi|254244966|ref|ZP_04938288.1| hypothetical protein PA2G_05845 [Pseudomonas aeruginosa 2192]
gi|126198344|gb|EAZ62407.1| hypothetical protein PA2G_05845 [Pseudomonas aeruginosa 2192]
Length = 390
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 31/164 (18%), Positives = 70/164 (42%), Gaps = 7/164 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I + L ++ + + ++ ++ GG + G+AI++ ++ +
Sbjct: 62 IYIYGEIGFWGITSADFIRDLKAVD--DGTSPVLVHFDTIGGDLFDGIAIHNALRALGER 119
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ G S GS+ + NA ++H P +G + D+ + A + +
Sbjct: 120 CTARIDGACFSAGSVAACGAHRVEM--ADNALFMIHNPWTLAAGDSEDLRKVADMMDQAF 177
Query: 163 RRLNEIYVKNC-GKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ Y E+ + +D + ++A EA D G VD+VL
Sbjct: 178 EGIVASYQHRTLNVDDAELRRMIDDETWLTAPEAKDKGFVDEVL 221
>gi|111021596|ref|YP_704568.1| ATP-dependent Clp protease [Rhodococcus jostii RHA1]
gi|110821126|gb|ABG96410.1| possible ATP-dependent Clp protease [Rhodococcus jostii RHA1]
Length = 219
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/167 (26%), Positives = 77/167 (46%), Gaps = 3/167 (1%)
Query: 38 RLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
RL +RIV +TG+++ A L + E+ L+++ V A + DT+
Sbjct: 47 RLFDKRIVSLTGRLDSEATNRAAASLAL-LDASGDGEVQLWLHGVDADVDAAATLLDTLD 105
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+ P+ C G M L+ ++ R A +A L +P +G ASD+ A+
Sbjct: 106 LMGVPLHVHCRGDVRGMAVAFLAPADR--RTAASHATFHLREPQTSCTGPASDVAIAAEH 163
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ RRL + +CG+ + V + I++A EA D+G++D V
Sbjct: 164 HEQQLRRLQQRIADSCGRPVDAVSGDMRDHRILTADEARDYGLIDAV 210
>gi|264679702|ref|YP_003279609.1| peptidase S14, ClpP [Comamonas testosteroni CNB-2]
gi|262210215|gb|ACY34313.1| peptidase S14, ClpP [Comamonas testosteroni CNB-2]
Length = 697
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 13/172 (7%)
Query: 45 VFVTGQIEDH------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+ + G I + A A+L L+ + I++ INS GG V G+AIY+ M+
Sbjct: 30 ILIYGDIGESWWDETTSAKSFLAELSALDVDA----ITVRINSLGGSVPDGIAIYNAMKR 85
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K I+ G A S+ SL+ G+ + NA +++H P +G ++++ A +
Sbjct: 86 HKATITVEVDGIAYSIASLIAMGGDTVNMAS--NALMMIHAPWTYAAGNSAELRELADQL 143
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLD-RDHIMSASEACDWGVVDKVLMSRI 209
++ Y G + D +DH +A EA +D + S
Sbjct: 144 DTWANAMSTSYAAKTGDQAGALALLTDGKDHFFTAEEALALKFIDAITDSNP 195
>gi|254991945|ref|ZP_05274135.1| Clp protease domain protein [Listeria monocytogenes FSL J2-064]
Length = 238
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 2/144 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ I + INS GG V AG IY T++ ++ +G AAS S++ AG+K
Sbjct: 35 ENNEPIDVIINSGGGDVYAGSEIYTTLKGYNGTVNVKVVGIAASAASVIAMAGDKVEI-- 92
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A+I++H + G G D+E A+ + Y+ GK +E+ +
Sbjct: 93 SPTAQIMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMDKTGKNMDELLNLMGETTW 152
Query: 190 MSASEACDWGVVDKVLMSRIDIEE 213
+A +A + G D+V+ S +
Sbjct: 153 FNAQQAVEAGFADEVMFSNEKAPQ 176
>gi|325690442|gb|EGD32445.1| peptidase s14, clpp [Streptococcus sanguinis SK115]
Length = 227
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I E + + Q+ E + ++L+INSPGG V A IY+ + K
Sbjct: 14 RVLHLNGTIASESWVDDDVTPQIFKNELMSGSGPLTLWINSPGGDVFAAAQIYNMLMDYK 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG P A +++H P G + ++ER + +
Sbjct: 74 DDVTVNIDGIAASAASVIAMAGTTVNM--SPVAMMMIHNPMTVAIGDSKEMERAIAMLSE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+K + Y + ++ +D + +A +A + G D +L
Sbjct: 132 VKESILNAYEIKTSLSRVQLSHLMDAESWFNAKKALELGFADSIL 176
>gi|327461145|gb|EGF07478.1| peptidase s14, clpp [Streptococcus sanguinis SK1057]
Length = 227
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I E + + Q+ E + ++L+INSPGG V A IY+ + K
Sbjct: 14 RVLHLNGTIASESWVDDDVTPQIFKNELMSGSGPLTLWINSPGGDVFAAAQIYNMLMDYK 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG P A +++H P G + ++E+ + +
Sbjct: 74 DDVTVNIDGIAASAASVIAMAGTTVNM--SPVAMMMIHNPMTVAIGDSKEMEKAIAMLSE 131
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+K + Y + ++ +D + +A +A + G D +L
Sbjct: 132 VKESILNAYEIKTSLSRVQLSHLMDAESWFNAKKALELGFADSIL 176
>gi|325687744|gb|EGD29765.1| peptidase s14, clpp [Streptococcus sanguinis SK72]
Length = 232
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQI--EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R++ + G I E + + Q+ E + ++L+INSPGG V A IY+ + K
Sbjct: 19 RVLHLNGTIASESWVDDDVTPQIFKNELMSGTGPLTLWINSPGGDVFAAAQIYNMLMDYK 78
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
++ G AAS S++ AG P A +++H P G + ++E+ + +
Sbjct: 79 DDVTVNIDGIAASAASVIAMAGTTVNM--SPVAMMMIHNPMTVAIGDSKEMEKAIAMLSE 136
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+K + Y + ++ +D + +A +A + G D +L
Sbjct: 137 VKESILNAYEIKTSLSRVQLSHLMDAESWFNAKKALELGFADSIL 181
>gi|260577759|ref|ZP_05845694.1| ClpP protease family protein [Corynebacterium jeikeium ATCC 43734]
gi|258604154|gb|EEW17396.1| ClpP protease family protein [Corynebacterium jeikeium ATCC 43734]
Length = 473
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 35/179 (19%), Positives = 68/179 (37%), Gaps = 14/179 (7%)
Query: 45 VFVTGQIEDH--------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+ + G I A + AQL ++++ I+S GG V G+ I +
Sbjct: 4 ILMYGPIGPDFWEPENAITAKSVMAQL-----SEISGDVTVRISSGGGDVYEGVDIMTAL 58
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ ++ AAS S + G ++ ++LH+ G A D+ +
Sbjct: 59 KNHDGEVTVIVESLAASAASFIAVGGA-DRVLMRKSSEMMLHRAWTLAEGNADDVRKTLG 117
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
D+ + +L IY G ++ + + +A EA G+ D ++ + E S
Sbjct: 118 DLERQDNKLAAIYAGKAGGEVQDWLDAMSAETWYTAEEAVAAGLADGIVAEKSSAPEPS 176
>gi|325115097|emb|CBZ50653.1| atp-dependent Clp protease proteolytic subunit,related [Neospora
caninum Liverpool]
Length = 291
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/154 (29%), Positives = 76/154 (49%), Gaps = 22/154 (14%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+ + INSPGG VTA + I D Q + + T C+GQAA + ++LL+AG G R A P++
Sbjct: 121 PVDILINSPGGSVTAALGILDLFQSLPFDVHTTCVGQAAGVAAMLLAAGTPGCRRAFPSS 180
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK-NCG------------------ 174
R+ L Q G GQA I+R +I ++R + G
Sbjct: 181 RLSLRQIEGRVEGQAEAIDRETLEIENVQRMVYRHLAAFCTGRQARRDEREQEREQERER 240
Query: 175 ---KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
K + + + +++ +SA EA +G++D+V+
Sbjct: 241 QIEKREKAIREDCEKELFLSAGEAVKYGLIDRVI 274
>gi|322832526|ref|YP_004212553.1| peptidase S14 ClpP [Rahnella sp. Y9602]
gi|321167727|gb|ADW73426.1| peptidase S14 ClpP [Rahnella sp. Y9602]
Length = 282
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A I L + E+ I NSPGG + G+AIY+ ++ ++ +G AAS
Sbjct: 60 TANRIAGALRSMNGEDVTVSI----NSPGGDMFEGLAIYNQLREYSGKVTVKVLGIAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ A +++H G D+ R AQD+ R + +IY G
Sbjct: 116 ASIIAMAGDEVQIGRG--AFLMIHNCWVYAVGNRHDLARAAQDMEPFDRAMQDIYSARSG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+V + +D + + ++A + G D++L S +I + +
Sbjct: 174 LDASDVSEMMDNETYIGGNDAVEKGFADRLL-SADEISDGDE 214
>gi|167758211|ref|ZP_02430338.1| hypothetical protein CLOSCI_00549 [Clostridium scindens ATCC 35704]
gi|167664108|gb|EDS08238.1| hypothetical protein CLOSCI_00549 [Clostridium scindens ATCC 35704]
Length = 251
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 37/135 (27%), Positives = 74/135 (54%), Gaps = 5/135 (3%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFI--KPPISTFCMGQAASMGSLLLSAGEKG 125
+E K++++Y+NS GG V AG+AIY+ ++ K + F G A S+ S+L AG +
Sbjct: 48 SEQEGKDLNVYVNSGGGSVFAGIAIYNMLKRHAAKNNVKVFVDGLAGSIASVLAFAGSEA 107
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H P G ++D+ + A D+ +IK + +Y ++ G T +++
Sbjct: 108 PEIPS-NAFLMIHNPWSYCEGNSADMRKMADDLDQIKTGILNVYAEHLKEGVTIDQISAL 166
Query: 184 LDRDHIMSASEACDW 198
+D + ++ +A ++
Sbjct: 167 MDAETWLNGQQAAEY 181
>gi|156933216|ref|YP_001437132.1| hypothetical protein ESA_01027 [Cronobacter sakazakii ATCC BAA-894]
gi|156531470|gb|ABU76296.1| hypothetical protein ESA_01027 [Cronobacter sakazakii ATCC BAA-894]
Length = 284
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 7/162 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A+ I L L + I NSPGG + G+AIY+ ++ ++ +G AAS
Sbjct: 60 TASRIAGALRSLNGADVTVNI----NSPGGDMFEGLAIYNLLREYDGKVTVKVLGLAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ A +++H G D+ + A D+ + +++IY G
Sbjct: 116 ASIIAMAGDEVQIGRG--AFLMIHNCWVYAMGNRHDLAQIAADMAPFDKAMSDIYQARSG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
E V++ +D + + SEA + G D +L S +I + +
Sbjct: 174 LDAETVDRMMDGETYIGGSEAVEKGFADSLL-SADEIADDDE 214
>gi|327439480|dbj|BAK15845.1| protease subunit of ATP-dependent Clp protease [Solibacillus
silvestris StLB046]
Length = 245
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 29/133 (21%), Positives = 66/133 (49%), Gaps = 2/133 (1%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+ +I + +NSPGG G+AIY+ ++ ++ G A S S++ AG++
Sbjct: 62 QAGTNDIVVRLNSPGGSAFDGIAIYNRLKEHPGKVTIHVDGWACSAASIIAMAGDE--VI 119
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
A +++H+ S G +D+ + A + +++ + ++Y+ + EE+ + ++ +
Sbjct: 120 MGTGAMMMIHEASNIVWGTKNDMRKVADMLEELEAGIVDVYMTKAKISREEITEQMNAET 179
Query: 189 IMSASEACDWGVV 201
SA +A + G
Sbjct: 180 WFSALKAVEIGFA 192
>gi|160898878|ref|YP_001564460.1| peptidase S14 ClpP [Delftia acidovorans SPH-1]
gi|160364462|gb|ABX36075.1| peptidase S14 ClpP [Delftia acidovorans SPH-1]
Length = 345
Score = 79.3 bits (194), Expect = 3e-13, Method: Composition-based stats.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 51 IEDHMAT-LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI---KPPISTF 106
I+D + A+ + N +I + +N+PGG V AG+ I++ ++ ++T
Sbjct: 20 IDDEIGFWGTQAKDFRDQLANVAGDIDVELNTPGGDVFAGLGIFNMLRAHAAKGFQVTTR 79
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
MG AAS+GS+LL AG+K R N + H + G G A ++ HA + K+K +L
Sbjct: 80 VMGVAASIGSVLLLAGDK--REMPKNTMAMTHNVASGIWGTADELRDHADTMDKVKGQLR 137
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
IYV G + L +D+ M+A EA G
Sbjct: 138 GIYVDRLGVDEATADAMLGKDNWMTADEALATGFA 172
>gi|329295807|ref|ZP_08253143.1| peptidase S14 ClpP [Plautia stali symbiont]
Length = 268
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 6/148 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A I A L LE K+I++ INSPGG + G+ I++ ++ ++ +G AAS
Sbjct: 43 TAKRIGAILRSLE----GKDITVNINSPGGDLFEGLTIFNQLREYAGKVTVKILGLAASA 98
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ +G++ A +++H G G D A+ + + ++YV G
Sbjct: 99 ASIIAMSGDEIQIGRS--AFLMIHNTWGMAVGNRHDFADIAEKMTPFDFAMRDVYVARTG 156
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVD 202
+ V +D + ++ EA + G D
Sbjct: 157 MDEKTVTAMMDNETWINGGEAVEKGFAD 184
>gi|70726774|ref|YP_253688.1| hypothetical protein SH1773 [Staphylococcus haemolyticus JCSC1435]
gi|68447498|dbj|BAE05082.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 288
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 43/176 (24%), Positives = 86/176 (48%), Gaps = 5/176 (2%)
Query: 43 RIVFVTGQIE--DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
I+ ++G I + I A+ + +N +++I + +NS GG V G+ IY+ ++ +
Sbjct: 22 HILTLSGTIANLSFLDDTISAKAVKDSLDNVKEDIVIRLNSGGGDVFEGIEIYNYLKSLS 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I+ AAS SL+ AG+K + N +++H+ S G SDI++ +
Sbjct: 82 NHITIEVTALAASAASLVAMAGDKIIIRTGAN--MMVHEASTMAFGNKSDIQKTLNALTA 139
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
I + +IY G +E+ + + ++A EA + G D+ SR ++++ +
Sbjct: 140 IDTSIVDIYHDRTGLDRDEIVNLITNETWLTADEAINKGFADE-KSSRKSVDKQKE 194
>gi|757799|emb|CAA59932.1| ATP dependent casein protease [Campylobacter jejuni]
Length = 49
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 40/47 (85%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLF 65
+P V+E+++RGERSYDIYSRLLK+RI+ ++G+I D +A I AQLLF
Sbjct: 3 IPYVIEKSSRGERSYDIYSRLLKDRIIMLSGEIHDELAASIVAQLLF 49
>gi|229120181|ref|ZP_04249432.1| Clp protease [Bacillus cereus 95/8201]
gi|228663222|gb|EEL18811.1| Clp protease [Bacillus cereus 95/8201]
Length = 236
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D ++ I +L + AE I ++INSPGG V +AI++ + I G AA
Sbjct: 24 DISSSEIRRKLGNINAET----IHVHINSPGGDVFESIAIHNLFKNHNATIIIHIDGLAA 79
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S++ A +K N +++H+ +G A + + A D+ KI + E Y
Sbjct: 80 SGASVIAMAADK--VIMPKNTMLMIHKAWTFAAGNAEQLRKVANDLEKIDTAVTESYTSR 137
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
E+E L + ++A E G+ D+++
Sbjct: 138 FVGERSELETLLAEETWLTAEECLALGLCDEIV 170
>gi|239625900|ref|ZP_04668931.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Clostridiales bacterium 1_7_47_FAA]
gi|239520130|gb|EEQ59996.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Clostridiales bacterium 1_7_47FAA]
Length = 257
Score = 78.9 bits (193), Expect = 4e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE +++++YINS GG V AG+AIY+ ++ + F A + L +
Sbjct: 63 AEANGRDLNIYINSGGGSVFAGIAIYNMLKRYQGKKHCFVDA-LAGSIASLFPFVDSDKP 121
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLD 185
NA +++H+P G A+++ + A + I+ + IY ++ G T E++++ ++
Sbjct: 122 TIPKNAYLMIHKPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIKELME 181
Query: 186 RDHIMSASEACDW 198
+ +S EA +
Sbjct: 182 AETWLSGEEAAKY 194
>gi|315221880|ref|ZP_07863792.1| Clp protease [Streptococcus anginosus F0211]
gi|315189113|gb|EFU22816.1| Clp protease [Streptococcus anginosus F0211]
Length = 227
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + + + INS GG V IY ++ K ++ +G AAS S++ AG+ +
Sbjct: 37 PSEPLEVRINSSGGDVYTANEIYAKLRGHKGKVTVKIVGLAASAASVIAMAGD--VIEMN 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A +++H S G + ++R + + L Y + G E++++ ++R+ +
Sbjct: 95 PIALMMIHNVSTLTYGNSQQLKRQIETMDVANDALATAYQERTGLAKEKIKEMMERETWL 154
Query: 191 SASEACDWGVVDK 203
S A G DK
Sbjct: 155 SCDTAISLGFADK 167
>gi|237744773|ref|ZP_04575254.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|229432002|gb|EEO42214.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
Length = 367
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 71/151 (47%), Gaps = 6/151 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIY----DTMQFIKPPISTFCMGQAASMGSLLLSA 121
L+ +I+L +NSPGG V AIY D + I+ + G AAS S L+
Sbjct: 48 LQNYKNVSQINLRVNSPGGDVFEASAIYNLLKDFAKVNNIQITGYIDGLAASAASFLILC 107
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
K + A ++H P G + ++++ + + +K + +IY + EE+
Sbjct: 108 ASKIVMGIG--ALFMIHNPLTYAYGNSIELQKQIELLDTVKESILDIYCTKSKLSREEIA 165
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ + A+EA + G +D+++ + +E
Sbjct: 166 EKMNNEKWFRANEALEAGFIDEIVENDNSLE 196
>gi|217965838|ref|YP_002351516.1| serine protease [Listeria monocytogenes HCC23]
gi|217335108|gb|ACK40902.1| serine protease [Listeria monocytogenes HCC23]
gi|307569613|emb|CAR82792.1| phage protein, Clp family [Listeria monocytogenes L99]
Length = 276
Score = 78.9 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/137 (29%), Positives = 67/137 (48%), Gaps = 4/137 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A +I + INS GG V G AIY+ + I G AAS+ S++ AG+
Sbjct: 49 LDALGDVSKIYVNINSNGGFVYEGQAIYNQLVRHPAQIHVRIDGMAASIASVIAMAGD-- 106
Query: 126 MRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
+P NA++++H+P+GG G SD+E + + K+ + Y + E+E +
Sbjct: 107 -IIEMPANAQMMIHEPAGGAFGNKSDLESAIRALDASKQSIIAAYRTHTTLEVSEIESMM 165
Query: 185 DRDHIMSASEACDWGVV 201
+ MS EA + G
Sbjct: 166 AEEKWMSGQEAYELGFA 182
>gi|319939551|ref|ZP_08013911.1| hypothetical protein HMPREF9459_00899 [Streptococcus anginosus
1_2_62CV]
gi|319811537|gb|EFW07832.1| hypothetical protein HMPREF9459_00899 [Streptococcus anginosus
1_2_62CV]
Length = 227
Score = 78.5 bits (192), Expect = 5e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
P + + + INS GG V IY ++ K ++ +G AAS S++ AG+ +
Sbjct: 37 PSEPLEVRINSSGGDVYTANEIYAKLRGHKGKVTVKIVGLAASAASVIAMAGD--VIEMN 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A +++H S G + ++R + + L Y + G E++++ ++R+ +
Sbjct: 95 PIALMMIHNVSTLTYGNSQQLKRQIETMDVANDALATAYQERTGLAKEKIKEMMERETWL 154
Query: 191 SASEACDWGVVDK 203
S A G DK
Sbjct: 155 SCDTAISLGFADK 167
>gi|291525012|emb|CBK90599.1| Protease subunit of ATP-dependent Clp proteases [Eubacterium
rectale DSM 17629]
Length = 259
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE +++++YINS GG V AG+AIY+ ++ + F A + L +
Sbjct: 65 AEANGRDLNIYINSGGGSVFAGIAIYNMLKRYQGKKHCFVDA-LAGSIASLFPFVDSDKP 123
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLD 185
NA +++H+P G A+++ + A + I+ + IY ++ G T E++++ ++
Sbjct: 124 TIPKNAYLMIHKPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIKELME 183
Query: 186 RDHIMSASEACDW 198
+ +S EA +
Sbjct: 184 AETWLSGEEAAKY 196
>gi|160938986|ref|ZP_02086337.1| hypothetical protein CLOBOL_03880 [Clostridium bolteae ATCC
BAA-613]
gi|158437949|gb|EDP15709.1| hypothetical protein CLOBOL_03880 [Clostridium bolteae ATCC
BAA-613]
Length = 259
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 67/133 (50%), Gaps = 3/133 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE +++++YINS GG V AG+AIY+ ++ + F A + L +
Sbjct: 65 AEANGRDLNIYINSGGGSVFAGIAIYNMLKRYQGKKHCFVDA-LAGSIASLFPFVDSDKP 123
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLD 185
NA +++H+P G A+++ + A + I+ + IY ++ G T E++++ ++
Sbjct: 124 TIPKNAYLMIHKPWCDCEGNANELRKMADTLEAIEAGIWSIYEEHLAEGVTIEQIKELME 183
Query: 186 RDHIMSASEACDW 198
+ +S EA +
Sbjct: 184 AETWLSGEEAAKY 196
>gi|217964655|ref|YP_002350333.1| Clp protease domain protein [Listeria monocytogenes HCC23]
gi|217333925|gb|ACK39719.1| Clp protease domain protein [Listeria monocytogenes HCC23]
gi|307570780|emb|CAR83959.1| clpP protease family protein [Listeria monocytogenes L99]
Length = 238
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 60 CAQLLFLEAENPQKEI--------SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+L +E+ +P+ I + INS GG V AG IY T++ ++ +G A
Sbjct: 17 IYDMLDMESTSPRDIILPENNEPVDVIINSGGGDVYAGSEIYTTLKGYNGTVNVQVVGIA 76
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
AS S++ AG+K P A+I++H + G G D+E A+ + Y+
Sbjct: 77 ASAASVIAMAGDKVEI--SPTAQIMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMD 134
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
GK +E+ + +A +A + G D+V+ S +
Sbjct: 135 KTGKNMDELLNLMGETTWFNAQQAVEAGFADEVMFSNEKAPQ 176
>gi|320540565|ref|ZP_08040215.1| Clp protease domain-containing protein [Serratia symbiotica str.
Tucson]
gi|320029496|gb|EFW11525.1| Clp protease domain-containing protein [Serratia symbiotica str.
Tucson]
Length = 285
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 6/148 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A I A L LE K+I++ INSPGG + G+ I++ + ++ +G AAS
Sbjct: 60 TAKRIGAILRSLE----DKDITVNINSPGGDLFEGLTIFNQLLEYAGKVTVKILGLAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ +G++ +A +++H G G D A+ + L +IYV G
Sbjct: 116 ASIIAMSGDEIQI--GRSAFLMIHNTWGMAVGNRHDFADIAEKMTPFDFALRDIYVARTG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVD 202
+ + +D + + EA + G D
Sbjct: 174 MDEKTITAMMDNETWIHGGEAVEKGFAD 201
>gi|317129435|ref|YP_004095717.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
gi|315474383|gb|ADU30986.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
Length = 250
Score = 78.5 bits (192), Expect = 6e-13, Method: Composition-based stats.
Identities = 41/146 (28%), Positives = 69/146 (47%), Gaps = 2/146 (1%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L E +++ + INS GG V AG IY ++ K + MG AAS S+ G+
Sbjct: 33 KLIEEANGEDLEVEINSGGGSVWAGSEIYTLLKSCKQNVVVNIMGIAASAASVAAMGGK- 91
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
+ P +I++H G SG ++E A+ + + R + Y+ GK EE+ +
Sbjct: 92 -LIRIAPTGQIMIHNSMSGASGDHRELEHAAEMLKGVDRSIANAYILKTGKNMEELLSLM 150
Query: 185 DRDHIMSASEACDWGVVDKVLMSRID 210
++ M A EA + G D+++ D
Sbjct: 151 AKETYMGAKEAKELGFADEIMFDEDD 176
>gi|291514745|emb|CBK63955.1| Protease subunit of ATP-dependent Clp proteases [Alistipes shahii
WAL 8301]
Length = 290
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 4/143 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE E+ + I S GG V + I+D ++ + ++T C G AS +++ A +G R
Sbjct: 51 AEIEAPEVVVNIRSTGGDVNDALLIHDALRQLPARVTTRCYGYTASAATIIAQAASEGCR 110
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
NA L+H G A++I + + R+ +Y G+ E E + +
Sbjct: 111 LLSANALYLIHTAICSTEGNAAEIAGKIDLLHQTDARIAAVYASRSGRPAAEFEALMAEN 170
Query: 188 H----IMSASEACDWGVVDKVLM 206
+ ++ EA G+ DKV+
Sbjct: 171 NGNGRWLAPEEAVAAGLADKVVE 193
>gi|284801601|ref|YP_003413466.1| hypothetical protein LM5578_1354 [Listeria monocytogenes 08-5578]
gi|284994743|ref|YP_003416511.1| hypothetical protein LM5923_1307 [Listeria monocytogenes 08-5923]
gi|284057163|gb|ADB68104.1| hypothetical protein LM5578_1354 [Listeria monocytogenes 08-5578]
gi|284060210|gb|ADB71149.1| hypothetical protein LM5923_1307 [Listeria monocytogenes 08-5923]
Length = 238
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 39/139 (28%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I + INS GG V AG IY T++ ++ +G AAS S++ AG+K P A+
Sbjct: 40 IDVIINSGGGDVYAGSEIYTTLKGYNGTVNVKVVGIAASAASVIAMAGDKVEI--SPTAQ 97
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I++H + G G D+E A+ + Y+ GK +E+ + +A +
Sbjct: 98 IMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMDKTGKNMDELLNLMGETTWFNAQQ 157
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A + G D+V+ S +
Sbjct: 158 AVEAGFADEVMFSNEKAPQ 176
>gi|126464072|ref|YP_001045185.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029]
gi|126105883|gb|ABN78413.1| peptidase S14, ClpP [Rhodobacter sphaeroides ATCC 17029]
Length = 279
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++ + INSPGG G+AIY+ ++ ++ +G AAS S++ AG++
Sbjct: 73 DRDVVVNINSPGGDFFEGLAIYNALREHPAKVTVRVLGVAASAASVIAMAGDEIRIARA- 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H +G + AQ + +IY G +++ LDR+ +S
Sbjct: 132 -GFLMIHNTWVLAAGDRHALTEVAQWLEPFDAVSADIYAARSGIDAKKIAAMLDRETWIS 190
Query: 192 ASEACDWGVVDKVLMSRI-DIEEKSK 216
+A + G D +L + D+ + +
Sbjct: 191 GGQAVEQGFADGLLSADELDLSDADE 216
>gi|296447012|ref|ZP_06888946.1| peptidase S14 ClpP [Methylosinus trichosporium OB3b]
gi|296255455|gb|EFH02548.1| peptidase S14 ClpP [Methylosinus trichosporium OB3b]
Length = 287
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 2/131 (1%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+K +++ INSPGG + G+AI++ ++ K ++ MG AAS SL+ AG+
Sbjct: 78 EKPVTVSINSPGGDMFEGLAIFNMLKDHKAEVTVKVMGLAASAASLIAMAGD--QILMGQ 135
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ +++H G G D+ A + EIY G+T +++ +D + ++
Sbjct: 136 GSFLMIHNAWGVVVGNRHDMRAGADMFEPFDSAMAEIYAARSGQTGDKIAAMMDAETFIN 195
Query: 192 ASEACDWGVVD 202
A +A D G D
Sbjct: 196 AKDARDLGFSD 206
>gi|116492765|ref|YP_804500.1| protease subunit of ATP-dependent Clp protease [Pediococcus
pentosaceus ATCC 25745]
gi|116102915|gb|ABJ68058.1| Protease subunit of ATP-dependent Clp protease [Pediococcus
pentosaceus ATCC 25745]
Length = 251
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ I S GG V A IY ++ ++ G AAS S++ AG+ P A+I+
Sbjct: 55 VDIASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVIAMAGD--HINISPTAQIM 112
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H+ +G A D+E A + I + + Y G ++ + + + ++AS+A
Sbjct: 113 IHKAWSQPAGNADDLEHEASVLNGIDQSIASAYEAKTGMDQADLLQLMANETWLTASDAV 172
Query: 197 DWGVVDKVL 205
D G D+++
Sbjct: 173 DKGFADEIM 181
>gi|77864703|ref|YP_355413.1| gp77 [Burkholderia phage Bcep176]
gi|161520414|ref|YP_001583841.1| peptidase S14 ClpP [Burkholderia multivorans ATCC 17616]
gi|189353395|ref|YP_001949022.1| bacteriophage ATP-dependent Clp protease [Burkholderia multivorans
ATCC 17616]
gi|76885889|gb|ABA60079.1| gp77 [Burkholderia phage Bcep176]
gi|160344464|gb|ABX17549.1| peptidase S14 ClpP [Burkholderia multivorans ATCC 17616]
gi|189337417|dbj|BAG46486.1| bacteriophage ATP-dependent Clp protease [Burkholderia multivorans
ATCC 17616]
Length = 280
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 60/128 (46%), Gaps = 2/128 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
E+++ +NSPGG G+AIY+ ++ K ++ MG AAS S++ AG++ A
Sbjct: 76 EVTVNVNSPGGDFFEGVAIYNLLREHKAKVTVNVMGLAASAASVIAMAGDE--ILMGDGA 133
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D+ A + + ++Y + G + E +D++ + A
Sbjct: 134 FLMIHNAWAVAIGNRHDMAAAAATLAPFDAAMAKLYAQRAGISEETAAAMMDKETWIGAD 193
Query: 194 EACDWGVV 201
+A G
Sbjct: 194 QAVKDGFA 201
>gi|224501839|ref|ZP_03670146.1| Clp protease domain protein [Listeria monocytogenes FSL R2-561]
Length = 238
Score = 78.1 bits (191), Expect = 7e-13, Method: Composition-based stats.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 10/162 (6%)
Query: 60 CAQLLFLEAENPQKEI--------SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+L +E+ +P+ I + INS GG V AG IY T++ ++ +G A
Sbjct: 17 IYDMLDMESTSPRDIILPENNEPVDVIINSGGGDVYAGSEIYTTLKGYNGTVNVQVVGIA 76
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVK 171
AS S++ AG+K P A+I++H + G G D+E A+ + Y+
Sbjct: 77 ASAASVIAMAGDKVEI--SPTAQIMVHNVASGVFGDYRDLEHEAKVSKGFNVSVANAYMD 134
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
GK +E+ + +A +A + G D+V+ S +
Sbjct: 135 KTGKNMDELLNLMGETTWFNAQQAVEAGFADEVMFSNEKAPQ 176
>gi|221132127|ref|XP_002163612.1| PREDICTED: similar to predicted protein, partial [Hydra
magnipapillata]
Length = 112
Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 59/94 (62%), Positives = 77/94 (81%)
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
GVVTAG+AIYDTMQFI+PPI+T+C+GQA SMGSLLL++G KG+R ALP++RI+LHQP GG
Sbjct: 1 GVVTAGLAIYDTMQFIEPPIATWCVGQACSMGSLLLASGSKGLRHALPHSRIMLHQPHGG 60
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
GQA+DI A++I+ +K LN+IY + GK
Sbjct: 61 VQGQATDIAIQAKEILHLKTMLNKIYSIHTGKDV 94
>gi|270291371|ref|ZP_06197593.1| ATP-dependent Clp protease, protease subunit [Pediococcus
acidilactici 7_4]
gi|270280217|gb|EFA26053.1| ATP-dependent Clp protease, protease subunit [Pediococcus
acidilactici 7_4]
Length = 243
Score = 78.1 bits (191), Expect = 8e-13, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ I S GG V A IY ++ ++ G AAS S++ AG+ P A+I+
Sbjct: 47 VDIASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVIAMAGD--HINISPTAQIM 104
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H+ +G A D+E A + I + + Y G ++ + + + ++AS+A
Sbjct: 105 IHKAWSQPAGNADDLEHEASILNGIDQSIASAYEAKTGMDQADLLQLMANETWLTASDAV 164
Query: 197 DWGVVDKVL 205
D G D+++
Sbjct: 165 DKGFADEIM 173
>gi|331701878|ref|YP_004398837.1| peptidase S14 ClpP [Lactobacillus buchneri NRRL B-30929]
gi|329129221|gb|AEB73774.1| peptidase S14 ClpP [Lactobacillus buchneri NRRL B-30929]
Length = 233
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + I INSPGG V AG IY ++ + +G AAS S++ AG+
Sbjct: 37 STANGQNIVAEINSPGGDVFAGSEIYTALKNYTGNVEVDIVGLAASAASVIAMAGDTIKI 96
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A++++H+ S G A D+ Q + + + +YV+ G + V + + ++
Sbjct: 97 --SPTAQLMIHRASTVSQGNADDLSSDLQGLNSTDQSIANVYVQRTGLDPQTVMQMMAKE 154
Query: 188 HIMSASEACDWGVVDK 203
++A +A + G D+
Sbjct: 155 TYINAKDAVEQGFADE 170
>gi|77462616|ref|YP_352120.1| putative ClpP-like protease [Rhodobacter sphaeroides 2.4.1]
gi|77387034|gb|ABA78219.1| putative ClpP-like protease [Rhodobacter sphaeroides 2.4.1]
Length = 279
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 3/146 (2%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+++ + INSPGG G+AIY+ ++ ++ +G AAS S++ AG++
Sbjct: 73 DRDVVVNINSPGGDFFEGLAIYNALREHPAKVTVRVLGVAASAASVIAMAGDEIRIARA- 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+++H +G + AQ + +IY G +++ LDR+ +S
Sbjct: 132 -GFLMIHNTWVLAAGDRHALTEVAQWLEPFDAVSADIYAARSGIDAKKISAMLDRETWIS 190
Query: 192 ASEACDWGVVDKVLMSRI-DIEEKSK 216
+A + G D +L + D+ + +
Sbjct: 191 GGQAVEQGFADGLLSADELDLSDADE 216
>gi|257884250|ref|ZP_05663903.1| ClpP protease [Enterococcus faecium 1,231,501]
gi|257820088|gb|EEV47236.1| ClpP protease [Enterococcus faecium 1,231,501]
Length = 235
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 2/143 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + + INS GG V AG IY ++ + ++ +G AAS S++ AG
Sbjct: 36 ENNEPLEVVINSGGGDVYAGSEIYTALRAYQGDVTVKIVGIAASAASVIAMAGNTIEI-- 93
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A+I++H S +G + A+ + + Y+ G E+ + ++ +
Sbjct: 94 SPTAQIMIHNVSSAAAGDHRTLAHEAEVLKNYNSSIANAYIAKTGIEEAELLELMNHETW 153
Query: 190 MSASEACDWGVVDKVLMSRIDIE 212
++A +A + G DKV+ +
Sbjct: 154 LTAEQAVENGFADKVMFENNEAP 176
>gi|319892557|ref|YP_004149432.1| Prophage Clp protease-like protein [Staphylococcus pseudintermedius
HKU10-03]
gi|317162253|gb|ADV05796.1| Prophage Clp protease-like protein [Staphylococcus pseudintermedius
HKU10-03]
Length = 240
Score = 77.7 bits (190), Expect = 9e-13, Method: Composition-based stats.
Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+++I + INS GG V +G IY ++ + + G AAS S++ AG+
Sbjct: 38 NKEDIEVIINSGGGDVFSGSEIYTALKEYQGKVIVKVYGVAASAASVVAMAGD--HIEMS 95
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H S G ++ ++ + + + YVK G + EE+ ++ + M
Sbjct: 96 PTAQMMIHNASTLAYGDNRNMNSASKMLSSTDKGIANAYVKKTGMSEEEILNLMNDETWM 155
Query: 191 SASEACDWGVVD 202
+A EA + G D
Sbjct: 156 NAQEAVEKGFAD 167
>gi|296085762|emb|CBI29573.3| unnamed protein product [Vitis vinifera]
Length = 91
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++ QP F GQA+DI+ +++ +K L ++Y K+ GK+ EE+E + R S SEA
Sbjct: 1 MIKQPIARFQGQATDIDLARKEVKNVKAELVKLYAKHIGKSPEEIEADIRRPKYFSPSEA 60
Query: 196 CDWGVVDKVLMSRIDIEEK 214
++G++DKVL + E++
Sbjct: 61 VEYGIIDKVLYNERSSEDR 79
>gi|238568809|ref|XP_002386506.1| hypothetical protein MPER_15208 [Moniliophthora perniciosa FA553]
gi|215438682|gb|EEB87436.1| hypothetical protein MPER_15208 [Moniliophthora perniciosa FA553]
Length = 80
Score = 77.7 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT-------YEEVEKTLDRDHIMSASEAC 196
SGQA+DI HA++I++I++ L IY K+CGK + EK L+RD+ M+A EA
Sbjct: 2 ASGQATDIAIHAKEILRIRKLLTSIYQKHCGKPGESVADGLDRFEKALERDYFMTAQEAV 61
Query: 197 DWGVVDKVLMSRID 210
D+G+VD +L
Sbjct: 62 DFGIVDAILEKSPK 75
>gi|260597538|ref|YP_003210109.1| hypothetical protein CTU_17460 [Cronobacter turicensis z3032]
gi|260216715|emb|CBA30102.1| hypothetical protein CTU_17460 [Cronobacter turicensis z3032]
Length = 284
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/162 (25%), Positives = 73/162 (45%), Gaps = 7/162 (4%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A+ I L L + I NSPGG + G+AIY+ ++ ++ +G AAS
Sbjct: 60 TASRIAGALRSLNGADVTVNI----NSPGGDMFEGLAIYNLLREYDGKVTVKVLGLAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ A +++H G D+ + A D+ + ++ IY G
Sbjct: 116 ASIIAMAGDEVQIGRG--AFLMIHNCWVCAMGNRHDLAQIATDMAPFDKAMSGIYQARSG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
V+K +D + + SEA + G D +L S +I + +
Sbjct: 174 LDASTVDKMMDSETYIGGSEAVEKGFADSLL-SADEIADDEE 214
>gi|121605153|ref|YP_982482.1| peptidase S14, ClpP [Polaromonas naphthalenivorans CJ2]
gi|120594122|gb|ABM37561.1| ATP-dependent Clp protease proteolytic subunit ClpP [Polaromonas
naphthalenivorans CJ2]
Length = 674
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/167 (24%), Positives = 73/167 (43%), Gaps = 13/167 (7%)
Query: 45 VFVTGQIEDH------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
+++ G I + A +L ++A I++ INS GG V G+AIY+ ++
Sbjct: 30 IYIYGDIGESWYEETVSAATFVKELNDIDATA----ITVRINSIGGSVPDGLAIYNALRR 85
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
K ++ G A S+ SL+ AG+K NA +++H P SG + ++ A +
Sbjct: 86 HKAEVTIEIDGMALSVASLIAMAGDKVNMAN--NAMLMIHGPWSYVSGNSVELRDMADQL 143
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLD-RDHIMSASEACDWGVVDKV 204
++ Y G + D +DH +A +A VD +
Sbjct: 144 DTWAAAMSNSYAARTGDQPAMLALLTDGKDHFYTAEQALAEKFVDAI 190
>gi|291550140|emb|CBL26402.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus
torques L2-14]
Length = 252
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L+A EI +Y NS GG V G AIY+ +Q + MG S+ +L A +K
Sbjct: 52 LDAIPETDEIKIYFNSNGGSVDQGTAIYNMLQQHGSYKTGIVMGGCHSIAFTILQACDK- 110
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
R ++H +G A+D+ A ++ ++++ + EE+ + +
Sbjct: 111 -RIMGQGTTAIIHDMWETVTGNAADLRAEADNLDVAMDSCVALFMQRATVSEEELREMMH 169
Query: 186 RDHIMSASEACDWGVVDKV 204
+ +S +A ++G++D++
Sbjct: 170 KTTTLSPQKALEYGLIDEI 188
>gi|227522327|ref|ZP_03952376.1| S14 family endopeptidase ClpP [Lactobacillus hilgardii ATCC 8290]
gi|227090534|gb|EEI25846.1| S14 family endopeptidase ClpP [Lactobacillus hilgardii ATCC 8290]
Length = 235
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 2/136 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ + I INSPGG V AG IY ++ + +G AAS S++ AG+
Sbjct: 39 STANGQNIVAEINSPGGDVFAGSEIYTALKNYTGNVEVDIVGLAASAASVIAMAGDTIKI 98
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A++++H+ S G A D+ Q + + + +YV+ G + V + + ++
Sbjct: 99 --SPTAQLMIHRASTVSQGNADDLSSDLQGLNSTDQSIANVYVQRTGLDPQTVMQMMAKE 156
Query: 188 HIMSASEACDWGVVDK 203
++A +A + G D+
Sbjct: 157 TYINAKDAVEQGFADE 172
>gi|125624869|ref|YP_001033352.1| hypothetical protein llmg_2097 [Lactococcus lactis subsp. cremoris
MG1363]
gi|290891540|ref|ZP_06554597.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429]
gi|124493677|emb|CAL98664.1| conserved hypothetical protein [Lactococcus lactis subsp. cremoris
MG1363]
gi|290478793|gb|EFD87460.1| hypothetical protein AWRIB429_1987 [Oenococcus oeni AWRIB429]
gi|300071664|gb|ADJ61064.1| ATP dependent Clp protease [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 234
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+EI L I S GG V A IY ++ P++ G AAS S++ AG+
Sbjct: 40 DDEEIVLNIASNGGDVFAASEIYTAIKMNGKPVTVNIQGLAASAASVIAMAGDTVNI--S 97
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H+ G G A D E+ A+ + + + + Y G ++ + + + M
Sbjct: 98 PTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWM 157
Query: 191 SASEACDWGVVDKVL 205
+A +A D G D ++
Sbjct: 158 TAQDAVDKGFADNIM 172
>gi|257467083|ref|ZP_05631394.1| prophage LambdaBa02, Clp protease family protein [Fusobacterium
gonidiaformans ATCC 25563]
gi|315918215|ref|ZP_07914455.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
gi|313692090|gb|EFS28925.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
25563]
Length = 371
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 71/171 (41%), Gaps = 10/171 (5%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
++ + + +L L+ + I+L +NS GG V AI++ ++ +
Sbjct: 31 WEEVGEVSSHSFAKELKNLKNISK---INLRVNSGGGDVFEANAIFNLLKSYAKENNVEI 87
Query: 108 MGQA----ASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+G AS S L+ K ++H P G ++ + + KIK
Sbjct: 88 IGYIDGLAASAASFLVLCAHK--VIMGVGCLFMIHNPWTYTKGNVKELGQTIDFLNKIKE 145
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ +IY T +E+ + +D + SASEA + G VD+ + D+E
Sbjct: 146 SILDIYETKTKLTRQEISQKMDEEKWFSASEALESGFVDE-MSEMEDVENN 195
>gi|21910478|ref|NP_664746.1| putative ClpP protease ATP-dependent protease proteolytic subunit -
phage associated [Streptococcus pyogenes MGAS315]
gi|28876226|ref|NP_795465.1| putative ClpP protease ATP-dependent protease proteolytic subunit
[Streptococcus pyogenes phage 315.2]
gi|28895825|ref|NP_802175.1| ClpP-like protease [Streptococcus pyogenes SSI-1]
gi|21904677|gb|AAM79549.1| putative ClpP protease ATP-dependent protease proteolytic subunit -
phage-associated [Streptococcus pyogenes MGAS315]
gi|28811074|dbj|BAC64008.1| putative ClpP-like protease [Streptococcus pyogenes SSI-1]
Length = 221
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 8/153 (5%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A I +L + +I L +NS GG+VT G IY ++ K ++ G AAS
Sbjct: 29 SAKSIIEKLPEDNS-----DIVLEVNSNGGLVTVGSEIYTALRNYKGKVTAEITGMAASA 83
Query: 115 GSLLLSAGEKGMRFALPNARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
S+ + +K P A++++H+ +G + D+++ + + + + YV
Sbjct: 84 ASVAVMGADK--VVMSPTAQMMVHKALFNWVAGNSDDLDKASNALKSSDKAIVNAYVAKT 141
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
GK+ +E+ + + MSA EA + G D+V+
Sbjct: 142 GKSEDEIMDLMRNETFMSAQEAVENGFADEVMT 174
>gi|33600679|ref|NP_888239.1| phage-related Clp protease [Bordetella bronchiseptica RB50]
gi|33568279|emb|CAE32191.1| phage-related Clp protease [Bordetella bronchiseptica RB50]
Length = 291
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/200 (23%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 15 FLGLVPMVVEQTNRGERS---YDIYSRLLKERIVFVTGQI--EDHMATLICAQ--LLFLE 67
++ P +E+ + G R+ D ER + V I + + A+ L
Sbjct: 21 YMS--PRALERWDSGVRAAVEDD------AERTISVYDVIGYDWWTGEGVTAKRIASALR 72
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+ +++ +NSPGG + G+AIY+ ++ + ++ +G AAS S++ AG+K R
Sbjct: 73 SMGAG-PVTVNVNSPGGDMFEGLAIYNLLREHQGEVTVKVLGLAASAASIIAMAGDK--R 129
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+++H G D+ A + + +IYV + G+ EV++ +D +
Sbjct: 130 QIARAGFLMVHNCWVNAQGNRHDLREFADTMEPFDAAMADIYVASSGQDLGEVQRQMDGE 189
Query: 188 HIMSASEACDWGVVDKVLMS 207
+ S+A + G D++L S
Sbjct: 190 TWIGGSQAIEQGYADELLPS 209
>gi|15837113|ref|NP_297801.1| hypothetical protein XF0511 [Xylella fastidiosa 9a5c]
gi|9105364|gb|AAF83321.1|AE003899_13 hypothetical protein XF_0511 [Xylella fastidiosa 9a5c]
Length = 752
Score = 77.4 bits (189), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 47 VTGQIED------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ G I D A + AQL + I + INS GGVV+ G+AIY+ +
Sbjct: 30 LYGPIGDLFWEDGVTAASVIAQL----STVTAPLIHVRINSNGGVVSDGLAIYNALTAHP 85
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I G AAS+ SL+ AG R PN+ +++H P G G A D+ A +
Sbjct: 86 ATIHVTIDGVAASIASLIAQAGT--TRRVYPNSLMMIHGPQTGGWGFAEDLRDTAAMLDT 143
Query: 161 IKRRLNEIY---VKNCGKTYEEVEKTLD--RDHIMSASEACDWGVVDKVLM 206
+ ++ Y + E + + L DH ++A + G+ D ++
Sbjct: 144 MAAAMHTAYTSGATH----PEAIRRMLSDGHDHWLTAQDMIAVGLADTIID 190
>gi|13095787|ref|NP_076678.1| protease [Lactococcus phage bIL286]
gi|15673378|ref|NP_267552.1| ATP dependent Clp protease [Lactococcus lactis subsp. lactis
Il1403]
gi|30089895|ref|NP_839925.1| putative ClpP protease [Lactococcus phage P335 sensu lato]
gi|12724383|gb|AAK05494.1|AE006371_8 prophage pi3 protein 23, ATP dependent Clp protease [Lactococcus
lactis subsp. lactis Il1403]
gi|12830976|gb|AAK08331.1|AF323669_44 protease [Lactococcus phage bIL286]
gi|21954684|gb|AAM83073.1|AF489521_34 putative ClpP protease [Lactococcus phage 4268]
Length = 235
Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+EI L I S GG V A IY ++ P++ G AAS S++ AG+
Sbjct: 41 DDEEIVLNIASNGGDVFAASEIYTAIKMNGKPVTVNIQGLAASAASVIAMAGDTVNI--S 98
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H+ G G A D E+ A+ + + + + Y G ++ + + + M
Sbjct: 99 PTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWM 158
Query: 191 SASEACDWGVVDKVL 205
+A +A D G D ++
Sbjct: 159 TAQDAVDKGFADNIM 173
>gi|257470301|ref|ZP_05634392.1| peptidase S14, ClpP [Fusobacterium ulcerans ATCC 49185]
gi|317064512|ref|ZP_07928997.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
gi|313690188|gb|EFS27023.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
ulcerans ATCC 49185]
Length = 367
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASMGSLLLS 120
+ LE +++S+ INSPGG ++ +AIY ++ + I+ + G A S +L+
Sbjct: 42 IKQLEKIKNARKVSIKINSPGGDISETLAIYHELKRLSQTKEITAYIDGMACSAATLIAI 101
Query: 121 AGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
A +K + ++ + +++ + + K K + ++Y + + E++
Sbjct: 102 AAKKTVMGKGCY-FMIHNPMIYMGYSNTGEMQEAIEHLNKTKENMIDLYEEKSSLSREDI 160
Query: 181 EKTLDRDHIMSASEACDWGVVDKV 204
K +D + +A EA + G +D++
Sbjct: 161 AKKMDEETYFTAQEALEAGFIDEI 184
>gi|302385169|ref|YP_003820991.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1]
gi|302195797|gb|ADL03368.1| peptidase S14 ClpP [Clostridium saccharolyticum WM1]
Length = 252
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
L + I L+INS GG V G+AIY+ ++ G A S+ L+L A ++
Sbjct: 53 KLGEIPDGQTIELHINSNGGSVKEGVAIYNLLKQKSNHKIGIVDGVAHSVAFLILQACDE 112
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
L+H +G A+ + ++A D+ + +++++ T EE+ +
Sbjct: 113 RKMCLG--TTALVHNMWMHCAGNATQLRKYADDLDDMMEANRQVFLERASITEEELTTLM 170
Query: 185 DRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ + ++ +A ++G++D++ + + K
Sbjct: 171 EAETYLTPDKAIEYGLIDEIYGKKSAAPQNEK 202
>gi|325109862|ref|YP_004270930.1| peptidase S14 ClpP [Planctomyces brasiliensis DSM 5305]
gi|324970130|gb|ADY60908.1| peptidase S14 ClpP [Planctomyces brasiliensis DSM 5305]
Length = 205
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 45 VFVTGQIED--HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+ + G I + + + QL L I + INSPGG + G+ IY+ ++
Sbjct: 3 ISIFGVIGEGQNTTEAVSRQLQGL------GNIEVVINSPGGSLIEGLGIYNLLKSHGGH 56
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++T +G A S GS++L AG++ R A +++H P+G F G +D+ + + +
Sbjct: 57 VTTRTVGAAWSAGSIVLLAGKR--RVMGGGASLMVHLPAGEFRGNVNDLAKFREALDVAG 114
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
R+L ++YV G E+VE+ L + +A EA D G +
Sbjct: 115 RQLVDVYVAETGTAREQVEQWLHDETWFTAQEAVDAGFAHAI 156
>gi|237742125|ref|ZP_04572606.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|229429773|gb|EEO39985.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
Length = 367
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 69/151 (45%), Gaps = 6/151 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIY----DTMQFIKPPISTFCMGQAASMGSLLLSA 121
LE +I+L INSPGG V IY D + I+ + G AAS S L+
Sbjct: 48 LENYKNVSQINLRINSPGGDVFEASTIYNLLKDFAKVNNIQITGYIDGLAASAASFLVLC 107
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
K + A ++H P G +++++ Q + +K + +IY EE+
Sbjct: 108 ASKVVMGIG--ALFMIHNPLTYAYGNTAELQKQIQLLDTVKESILDIYCTKSKLNREEIA 165
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ + A+EA + G VD+++ + +E
Sbjct: 166 EKMNNEKWFRANEALEAGFVDEIVENDNSLE 196
>gi|327393420|dbj|BAK10842.1| putative peptidase S14 ClpP [Pantoea ananatis AJ13355]
Length = 282
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/163 (23%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D + A L ++++ INSPGG + G+AIY+ ++ + ++ +G AA
Sbjct: 57 DGVTASRIAGALR---SMNGADVTVNINSPGGDMFEGLAIYNLLREYEGKVTVKVLGLAA 113
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S++ AG+ A +++H G D+ + A D+ + + +IY
Sbjct: 114 SAASIIAMAGD--DIQIGRGAFLMIHNCWVYAMGNRHDLSQIAADMEPFDKAMGDIYSYR 171
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
G + E++ + +D + + S+A D G D++L S +I +
Sbjct: 172 SGLSAEDIAEMMDGETYIGGSDAVDKGFADRLL-SADEISDDD 213
>gi|222107095|ref|YP_002547886.1| ClpP-type protease [Agrobacterium vitis S4]
gi|221738274|gb|ACM39170.1| ClpP-type protease [Agrobacterium vitis S4]
Length = 284
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 13/170 (7%)
Query: 42 ERIVFVTGQIEDH-------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
E I+ + I + A A L + KE+ + +NSPGG + G+AIY+
Sbjct: 42 ENIISIFDVIGEDYWSGGGFTAKRAAAALR----QIGNKEVIVQVNSPGGDMFEGIAIYN 97
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++ ++ +G AAS S++ A ++ + + +++H G G D+
Sbjct: 98 MLRAHPGKVTVNVLGWAASAASIIAMAADEIVMGLG--SFMMVHNAWGAVIGNQHDLRTA 155
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
L +IY G +++ +D + MS S+A G D+V
Sbjct: 156 TDLFAGFDSALADIYEARTGAKRKDIVALMDAETFMSPSDAVKNGFADRV 205
>gi|86358529|ref|YP_470421.1| Clp protease protein [Rhizobium etli CFN 42]
gi|86282631|gb|ABC91694.1| probable Clp protease protein [Rhizobium etli CFN 42]
Length = 694
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 17/180 (9%)
Query: 37 SRLLKERIVFVTGQI-----EDH---MATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
S+L+ + + + G + D ++ + L L ++ + +NS GG+
Sbjct: 36 SKLIVDGELMLYGPVGFTDFWDESGFTSSQVIEALSAL-----SGDVVVRLNSGGGIAME 90
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQ 147
G AI++ ++ + AAS SL+ AG++ +P +++H+PSG G
Sbjct: 91 GSAIHNALKRHDGKVIVKIDAIAASAASLIAMAGDE---IEMPLGTLLMIHEPSGMTLGP 147
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A D R A + + ++Y + G + +E+ + + + M+ EA G V
Sbjct: 148 ADDHRRTAGVLDTMTGVFAQVYAERTGLSEKEIRQMMKDETWMAPQEALANGFATSVSEH 207
>gi|55792477|gb|AAV65338.1| plastid catalytic subunit of ClpP5 protease [Prototheca
wickerhamii]
Length = 251
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 9/109 (8%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG---------G 84
D+ S LL RI ++ + + L+ ++LL+L +P K + +YINS G G
Sbjct: 143 DLPSLLLDGRICYIGMPLVPAVTELVISELLWLNYSSPTKPVYVYINSTGSQREGGESVG 202
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
T AI DTM +I+P I T +GQA ++LL++G+KG RFALP++
Sbjct: 203 FETEATAIMDTMAYIRPDIYTLVIGQACGNAAMLLASGKKGHRFALPHS 251
>gi|239834255|ref|ZP_04682583.1| ClpP protease [Ochrobactrum intermedium LMG 3301]
gi|239822318|gb|EEQ93887.1| ClpP protease [Ochrobactrum intermedium LMG 3301]
Length = 291
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 8/138 (5%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+ +++ +N PGG + G+AIY+ + ++ MG AAS S++ AG++
Sbjct: 74 KNPVTVNVNPPGGDMFEGLAIYNLLASHPGKVTVNVMGYAASAASIIAMAGDR--VIMST 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD---- 187
+ +++H+ G G D A + +IY G + V LD
Sbjct: 132 GSMMMIHRAWGLAVGNTHDFTDAATLFQSFDSSMADIYAARTGLAQDVVLSLLDGPSKAS 191
Query: 188 --HIMSASEACDWGVVDK 203
+SA EA + G D+
Sbjct: 192 DGTWLSADEAIEKGFADE 209
>gi|237738215|ref|ZP_04568696.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
gi|229420095|gb|EEO35142.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
mortiferum ATCC 9817]
Length = 361
Score = 76.6 bits (187), Expect = 2e-12, Method: Composition-based stats.
Identities = 34/143 (23%), Positives = 63/143 (44%), Gaps = 5/143 (3%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASMGSLLLSAG 122
L K++ L INSPGG V +A+Y ++ ++ + G AAS ++L A
Sbjct: 46 QLANLKNVKKLELKINSPGGDVFEAVAMYHEIKRFAQGKEVTAYIDGMAASAATILTLAA 105
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHA-QDIVKIKRRLNEIYVKNCGKTYEEVE 181
K ++H P + A + + K K L ++Y + C + +E+
Sbjct: 106 NK--TIMGKGCYFMIHNPLMYMGYANVEEMNEAIEHLNKTKDNLLDLYEEKCKLSRDEIA 163
Query: 182 KTLDRDHIMSASEACDWGVVDKV 204
+ +D+ +A EA G +D++
Sbjct: 164 EKMDKTTWYTAEEALQAGFIDEI 186
>gi|282917312|ref|ZP_06325067.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282318939|gb|EFB49294.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
Length = 245
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 148 MMARETWLNADEAIEQGFAD 167
>gi|312886089|ref|ZP_07745712.1| peptidase S14 ClpP [Mucilaginibacter paludis DSM 18603]
gi|311301439|gb|EFQ78485.1| peptidase S14 ClpP [Mucilaginibacter paludis DSM 18603]
Length = 378
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/147 (23%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
A+L+ L+A P+ I ++INSPGGVV G IY + + T +G AS+ ++
Sbjct: 36 KFMAELMALDAMRPKS-IEIWINSPGGVVMDGYNIYAAILKSVTKVDTVGVGCMASIAAV 94
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
+ AG R + + ++ H P + + ++ ++++ GK
Sbjct: 95 IFQAGR--TRTMMDYSWLMYHNPF---------GGDDTKVLEVMRESISKMVA-RSGKPE 142
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKV 204
E+ + ++ ++A EA ++G D +
Sbjct: 143 AEILAMMQKETYITAQEALEYGFADAI 169
>gi|306827690|ref|ZP_07460966.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
gi|304430120|gb|EFM33153.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
Length = 221
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+E A I QL +I L +NS GG+VT G +Y ++ K ++ G
Sbjct: 25 MEATSAKSIINQL-----PEDSSDIILEVNSNGGLVTVGSEVYTALRNYKGKVTAEITGM 79
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS S+ + +K P A++++H+ G + D+++ + + + + Y
Sbjct: 80 AASAASVAVMGADK--VVMSPTAQMMVHKALFNWVCGNSDDLDKASNALKSSDKAIVNAY 137
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
V G + +E+ + + MSA +A + G D+V+
Sbjct: 138 VAKTGLSEDEIMNLMRNETFMSAQDAVEKGFADEVMS 174
>gi|239638102|ref|ZP_04679061.1| serine protease [Staphylococcus warneri L37603]
gi|239596385|gb|EEQ78923.1| serine protease [Staphylococcus warneri L37603]
Length = 258
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/178 (25%), Positives = 81/178 (45%), Gaps = 13/178 (7%)
Query: 32 SYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMA 91
DIY F+ Q + M L+A E+ + INS GG V +G+
Sbjct: 5 EIDIYG--------FIDSQTIEGMTISPQTVREQLKAMGDVDEVVVNINSNGGDVFSGVT 56
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP-NARILLHQPSGGFSGQASD 150
IY+ ++ I+ G AAS+ S++ AG+ +P NA +++H G A
Sbjct: 57 IYNMLRRFDAHITVNVDGLAASIASVIAMAGD---TINMPGNAMLMVHNAWTVNEGDARS 113
Query: 151 IERHAQDIVKIKRRLNEIYV-KNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
++ A+D+ +I + YV KN + ++ +D + ++A EA G++D + +
Sbjct: 114 FKKRAEDLERINSVVFNSYVDKNPDIDHALLQDYMDEETWLTAKEAKKLGLIDNITEN 171
>gi|189501545|ref|YP_001957262.1| peptidase S14 ClpP [Candidatus Amoebophilus asiaticus 5a2]
gi|189496986|gb|ACE05533.1| peptidase S14 ClpP [Candidatus Amoebophilus asiaticus 5a2]
Length = 455
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/178 (26%), Positives = 80/178 (44%), Gaps = 8/178 (4%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI-NSPGGVVTAGMAIYDTMQF 98
L +R V + G + A I ++ + ++ K I + I NSPGG AG+ I MQ
Sbjct: 220 LSDRAVSLDGVVTSWKANYITDRIKYFNNKDKTKPIFIVIENSPGGSALAGLHIVQAMQN 279
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ P+ AASM +L+ + +K +A PNA +L HQP G +++ + +
Sbjct: 280 SQAPVYVVLKTFAASMAALITTLAKK--SYAYPNAILLHHQPWSFTGGNLRELKEEIEFM 337
Query: 159 VKIKRRLNEIYVKNCGKTYEEV-----EKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++ +RL K G + +++ EK D A A VD V+ + D
Sbjct: 338 KELWKRLGGQVAKKMGISLDKLDKQLYEKASRGDWTEFADNAKKIKWVDHVITNINDT 395
>gi|218901725|ref|YP_002449559.1| Clp protease [Bacillus cereus AH820]
gi|218538595|gb|ACK90993.1| Clp protease [Bacillus cereus AH820]
Length = 247
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I+++INS GG V +AI + ++ I G AAS S++ A +K N
Sbjct: 58 INVHINSGGGDVFESIAISNLLKNHSATIVVHIDGLAASGASVIAMAADK--IVMPKNTM 115
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ +G A + + A + KI + E Y E+E L + ++A E
Sbjct: 116 MMIHKAWTYAAGNAEGLRKVADRLDKIDNAVTESYTSRFVGEKSELESLLAEETWLTAEE 175
Query: 195 ACDWGVVDKV 204
+G D++
Sbjct: 176 CKTFGFCDEI 185
>gi|154482770|ref|ZP_02025218.1| hypothetical protein EUBVEN_00447 [Eubacterium ventriosum ATCC
27560]
gi|149736365|gb|EDM52251.1| hypothetical protein EUBVEN_00447 [Eubacterium ventriosum ATCC
27560]
Length = 385
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/173 (23%), Positives = 72/173 (41%), Gaps = 9/173 (5%)
Query: 47 VTGQIE------DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ G+I D + + Q L+ EI++ INS GG V A +AIY ++ K
Sbjct: 35 LYGEISEYSWYGDEITPSVFNQ--ELKDLGAVDEITVRINSGGGDVFAAVAIYTRLKEHK 92
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
IS G AS +++ AG+ I +D+E +++
Sbjct: 93 AKISVKIDGWCASAATIIAMAGDTIEISVGGVFMIHDPLAGLIGYYNTTDLENIVKELET 152
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRD-HIMSASEACDWGVVDKVLMSRIDIE 212
IK+ + Y+ K+ EE++ + + + EA + G V+ + +D E
Sbjct: 153 IKQSIVNCYMTVTDKSEEEIKSLMTNEGEWFTGEEAVEAGFCTAVMFTDVDTE 205
>gi|15924954|ref|NP_372488.1| phiN315 scaffolding protein-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|15927540|ref|NP_375073.1| hypothetical protein SA1775 [Staphylococcus aureus subsp. aureus
N315]
gi|30043952|ref|NP_835555.1| hypothetical protein, similar to scaffolding protein
[Staphylococcus phage phiN315]
gi|49484207|ref|YP_041431.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA252]
gi|87162394|ref|YP_494590.1| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|118725094|ref|YP_908830.1| putative Clp protease [Staphylococcus phage phiNM3]
gi|151222109|ref|YP_001332931.1| phage Clp-like protease [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156980281|ref|YP_001442540.1| hypothetical protein SAHV_1950 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161510188|ref|YP_001575847.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253316780|ref|ZP_04839993.1| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus str. CF-Marseille]
gi|255006752|ref|ZP_05145353.2| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus Mu50-omega]
gi|257426118|ref|ZP_05602534.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428771|ref|ZP_05605166.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 65-1322]
gi|257431384|ref|ZP_05607758.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257434097|ref|ZP_05610448.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257437005|ref|ZP_05613046.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus M876]
gi|258413640|ref|ZP_05681914.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|258423045|ref|ZP_05685944.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|258447952|ref|ZP_05696086.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|282914818|ref|ZP_06322600.1| putative Clp protease [Staphylococcus aureus subsp. aureus M899]
gi|282925262|ref|ZP_06332920.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282928145|ref|ZP_06335752.1| Clp protease [Staphylococcus aureus A10102]
gi|283771122|ref|ZP_06344013.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus H19]
gi|293507840|ref|ZP_06667682.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293510803|ref|ZP_06669504.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus M809]
gi|293545403|ref|ZP_06672080.1| putative Clp protease [Staphylococcus aureus subsp. aureus M1015]
gi|294849516|ref|ZP_06790258.1| Clp protease [Staphylococcus aureus A9754]
gi|295428547|ref|ZP_06821174.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276195|ref|ZP_06858702.1| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus MR1]
gi|13701759|dbj|BAB43052.1| SA1775 [Staphylococcus aureus subsp. aureus N315]
gi|14247737|dbj|BAB58126.1| phiN315 scaffolding protein-like protein [Staphylococcus aureus
subsp. aureus Mu50]
gi|49242336|emb|CAG41046.1| putative Clp protease [Staphylococcus aureus subsp. aureus MRSA252]
gi|87128368|gb|ABD22882.1| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus USA300_FPR3757]
gi|104641859|gb|ABF73201.1| putative Clp protease [Staphylococcus phage phiNM3]
gi|150374909|dbj|BAF68169.1| phage Clp-like protease [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156722416|dbj|BAF78833.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
gi|160368997|gb|ABX29968.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271026|gb|EEV03195.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
55/2053]
gi|257274415|gb|EEV05927.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 65-1322]
gi|257277830|gb|EEV08494.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
68-397]
gi|257281023|gb|EEV11167.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
E1410]
gi|257283599|gb|EEV13725.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus M876]
gi|257839593|gb|EEV64063.1| conserved hypothetical protein [Staphylococcus aureus A9763]
gi|257846832|gb|EEV70847.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|257858884|gb|EEV81753.1| conserved hypothetical protein [Staphylococcus aureus A6224]
gi|282313050|gb|EFB43449.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282321313|gb|EFB51642.1| putative Clp protease [Staphylococcus aureus subsp. aureus M899]
gi|282590209|gb|EFB95290.1| Clp protease [Staphylococcus aureus A10102]
gi|283459716|gb|EFC06807.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus H19]
gi|285817650|gb|ADC38137.1| Prophage Clp protease-like protein [Staphylococcus aureus 04-02981]
gi|290919816|gb|EFD96887.1| putative Clp protease [Staphylococcus aureus subsp. aureus M1015]
gi|291094903|gb|EFE25171.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291466376|gb|EFF08901.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus M809]
gi|294823653|gb|EFG40080.1| Clp protease [Staphylococcus aureus A9754]
gi|295127529|gb|EFG57168.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|312830339|emb|CBX35181.1| clp protease family protein [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315196577|gb|EFU26925.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
Length = 245
Score = 76.2 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 148 MMARETWLNADEAIEQGFAD 167
>gi|258429955|ref|ZP_05688325.1| conserved hypothetical protein [Staphylococcus aureus A9299]
gi|257849549|gb|EEV73517.1| conserved hypothetical protein [Staphylococcus aureus A9299]
Length = 245
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 148 MMARETWLNADEAIEQGFAD 167
>gi|221140568|ref|ZP_03565061.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|257136405|ref|YP_003169679.1| protease/scaffold protein [Staphylococcus phage P954]
gi|258450637|ref|ZP_05698698.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|282909284|ref|ZP_06317100.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283958726|ref|ZP_06376172.1| putative Clp protease [Staphylococcus aureus subsp. aureus
A017934/97]
gi|284025012|ref|ZP_06379410.1| phi77 ORF015-like protein, putative protease [Staphylococcus aureus
subsp. aureus 132]
gi|256681247|gb|ACV04990.1| protease/scaffold protein [Staphylococcus phage P954]
gi|257861637|gb|EEV84437.1| conserved hypothetical protein [Staphylococcus aureus A5948]
gi|269941434|emb|CBI49831.1| putative Clp protease [Staphylococcus aureus subsp. aureus TW20]
gi|282326852|gb|EFB57149.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|283789766|gb|EFC28588.1| putative Clp protease [Staphylococcus aureus subsp. aureus
A017934/97]
gi|302333628|gb|ADL23821.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|329314644|gb|AEB89057.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
T0131]
Length = 245
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 148 MMARETWLNADEAIEQGFAD 167
>gi|50914353|ref|YP_060325.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
gi|50903427|gb|AAT87142.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes MGAS10394]
Length = 221
Score = 75.8 bits (185), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 74/157 (47%), Gaps = 8/157 (5%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+E A I +L + +I L +NS GG+VT G IY ++ K ++ G
Sbjct: 25 MEAASAKSIIEKLPEDNS-----DIILEVNSNGGLVTVGSEIYTALRNYKGKVTAEITGM 79
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQ-PSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS S+ + +K P A++++H+ +G + D+++ + + + + Y
Sbjct: 80 AASAASVAVMGVDK--VVMSPTAQMMVHKASFNWVAGNSDDLDKASNALKSSDKAIVNAY 137
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
V G +E+ + + + MSA +A + G D+V+
Sbjct: 138 VAKTGLPEDEIMELMKNETFMSAQDAVEKGFADEVMS 174
>gi|302751864|gb|ADL66041.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
Length = 243
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 30 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 87
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 88 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 145
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 146 MMARETWLNADEAIEQGFAD 165
>gi|259908701|ref|YP_002649057.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
gi|224964323|emb|CAX55832.1| ATP-dependent Clp protease proteolytic subunit [Erwinia pyrifoliae
Ep1/96]
Length = 282
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/161 (22%), Positives = 76/161 (47%), Gaps = 6/161 (3%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A+ I A L + E+ I NSPGG + G+AIY+ ++ + ++ +G AAS
Sbjct: 60 TASRIAAALRSIGGEDVTVNI----NSPGGDMFEGLAIYNLLREYEGKVTVKVLGLAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ A +++H G ++ + A ++ R +N+IY G
Sbjct: 116 ASIIAMAGDEVQI--GRAAFLMIHNCWTFAMGNRHEMAKIAAELEPFDRAMNDIYGARTG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+E ++ + + SE+ + G D++L + +++
Sbjct: 174 LDAATIETMMNAETYIGGSESVEKGFADRLLTADEILDDDE 214
>gi|282904631|ref|ZP_06312506.1| putative Clp protease [Staphylococcus aureus subsp. aureus C160]
gi|282594880|gb|EFB99856.1| putative Clp protease [Staphylococcus aureus subsp. aureus C160]
Length = 245
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 148 MMARETWLNADEAIEQGFAD 167
>gi|218235172|ref|YP_002367332.1| Clp protease [Bacillus cereus B4264]
gi|218163129|gb|ACK63121.1| Clp protease [Bacillus cereus B4264]
Length = 197
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P +G A D + A+D+ I+ + +Y +N G EE+++
Sbjct: 68 -VVVPSNAFLMIHKPWTYAAGNAIDFRKAAEDLDNIESGIMNVYKENLKEGIEIEEIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKE 151
>gi|255591869|ref|XP_002535618.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223522515|gb|EEF26765.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 95
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/87 (42%), Positives = 60/87 (68%)
Query: 37 SRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+RL +ER++F+ ++ ++ + +++L E+ K++ L+INSPGG V G+AIYDTM
Sbjct: 6 NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESETKDLYLFINSPGGWVIPGIAIYDTM 65
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGE 123
QF++P + T CMG AASM S +L G+
Sbjct: 66 QFVRPDVQTVCMGLAASMASFILVGGK 92
>gi|326800870|ref|YP_004318689.1| peptidase S14 ClpP [Sphingobacterium sp. 21]
gi|326551634|gb|ADZ80019.1| peptidase S14 ClpP [Sphingobacterium sp. 21]
Length = 373
Score = 75.8 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 2/138 (1%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E I +YINSPGG V G+ I++T++ + I T+ G A SMG +LL + + G R
Sbjct: 46 EEKHDRIDIYINSPGGSVWEGLPIFNTIRSSQKEIHTYVNGIAFSMGFMLLLSAKNGRRH 105
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE-KTLD-R 186
A + + H S G A + + A ++ K L+ + + GKT E+V+ + L+
Sbjct: 106 AFKGSIGMAHNVSTYDYGNAKQLRKSADELDKYDDVLSALIAECSGKTVEQVKSEWLNYE 165
Query: 187 DHIMSASEACDWGVVDKV 204
DH + E G V+ +
Sbjct: 166 DHFFTPDEMKAEGFVNHI 183
>gi|253734912|ref|ZP_04869077.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
TCH130]
gi|297589979|ref|ZP_06948619.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
MN8]
gi|253727094|gb|EES95823.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
TCH130]
gi|297577107|gb|EFH95821.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
MN8]
gi|320142431|gb|EFW34245.1| Clp protease [Staphylococcus aureus subsp. aureus MRSA177]
Length = 247
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 34 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 91
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 92 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 149
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 150 MMARETWLNADEAIEQGFAD 169
>gi|304379157|ref|ZP_07361902.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
gi|304342272|gb|EFM08166.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
ATCC BAA-39]
Length = 247
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 34 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 91
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 92 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 149
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 150 MMARETWLNADEAIEQGFAD 169
>gi|253729750|ref|ZP_04863915.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253726485|gb|EES95214.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 247
Score = 75.4 bits (184), Expect = 4e-12, Method: Composition-based stats.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 34 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 91
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 92 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 149
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ R+ ++A EA + G D
Sbjct: 150 MMARETWLNADEAIEQGFAD 169
>gi|169829216|ref|YP_001699374.1| phage protein [Lysinibacillus sphaericus C3-41]
gi|168993704|gb|ACA41244.1| phage protein [Lysinibacillus sphaericus C3-41]
Length = 355
Score = 75.4 bits (184), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/153 (23%), Positives = 72/153 (47%), Gaps = 2/153 (1%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
++ Q + N +KE+ + INSPGG V A I+ ++ + G A
Sbjct: 25 PAVSPKRIMQQIDRAINNQEKELVVNINSPGGSVYAASEIWTHIKKYPGNSVSEISGVCA 84
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S++ A +K P +++H S G ++E Q +++ + + Y +
Sbjct: 85 SAASIIALASKK--VVIAPVGALMIHNASVIAEGDYREMESMKQLLIQTNDAIMQTYKEK 142
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
K+ EE+++ +D + M+A +A + G VD+++
Sbjct: 143 TKKSDEELKQMMDAETWMNAQQAVENGFVDEIM 175
>gi|228926947|ref|ZP_04090013.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228832682|gb|EEM78253.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
Length = 197
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P G A D + A+D+ I+ + +Y +N G EE+++
Sbjct: 68 -VVVPSNAFLMIHKPWTYAVGNAIDFRKAAEDLDNIESGIMNVYKENLKEGIEIEEIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKE 151
>gi|312599320|gb|ADQ91343.1| hypothetical protein BpV2_176c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 191
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 35/170 (20%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE--------NPQKEIS-LYINSPGGVVTAGMAIYDT 95
+F G+I D LE + + I +++ S GG + AG++ +
Sbjct: 23 IFYYGEITDVDILEFIEDFKKLEIDLLKKKAELIGYEPIMYVHVCSEGGDLFAGISAMNI 82
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-FSGQASDIERH 154
++ + + T G S + LL G + R NA +L+HQ S F G+ +++
Sbjct: 83 IEKSRVKVVTIAQGVCCSAATFLLLGGHE--RRIGKNAHVLIHQISTNGFWGKYEELKDE 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K+ + + Y + ++ +K + RD + E + VV +
Sbjct: 141 MKSCDKLMDMVTKTYKEKTTIPQKQFKKIMKRDVYLDPQECIKYNVVHSI 190
>gi|19745790|ref|NP_606926.1| putative ClpP protease [Streptococcus pyogenes MGAS8232]
gi|94988204|ref|YP_596305.1| ATP-dependent endopeptidase Clp proteolytic subunit [Streptococcus
phage 9429.1]
gi|94990086|ref|YP_598186.1| ATP-dependent endopeptidase Clp proteolytic subunit clpP
[Streptococcus phage 10270.1]
gi|94993998|ref|YP_602096.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus phage 10750.1]
gi|139474106|ref|YP_001128822.1| putative phage ClpP protease [Streptococcus pyogenes str. Manfredo]
gi|19747933|gb|AAL97425.1| putative ClpP protease [Streptococcus pyogenes MGAS8232]
gi|94541712|gb|ABF31761.1| ATP-dependent endopeptidase clp proteolytic subunit [Streptococcus
phage 9429.1]
gi|94543594|gb|ABF33642.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus phage 10270.1]
gi|94547506|gb|ABF37552.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Streptococcus phage 10750.1]
gi|134272353|emb|CAM30609.1| putative phage ClpP protease [Streptococcus pyogenes str. Manfredo]
Length = 221
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 8/157 (5%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+E A I QL +I L +NS GG+VT G +Y ++ K ++ G
Sbjct: 25 MEATSAKSIINQL-----PEDSSDIILEVNSNGGLVTVGSEVYTALRNYKGKVTAEITGM 79
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQP-SGGFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS S+ + +K P A++++H+ +G + D+++ + + + + Y
Sbjct: 80 AASAASVAVMGADK--VVMSPTAQMMVHKALFNWVAGNSDDLDKASNALKSSDKAIVNAY 137
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
V G + +E+ + + MSA +A + G D+V+
Sbjct: 138 VAKTGLSEDEIMNLMRNETFMSAQDAVEKGFADEVMS 174
>gi|270265270|ref|ZP_06193531.1| hypothetical protein SOD_m00020 [Serratia odorifera 4Rx13]
gi|270040674|gb|EFA13777.1| hypothetical protein SOD_m00020 [Serratia odorifera 4Rx13]
Length = 284
Score = 75.1 bits (183), Expect = 6e-12, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 65/134 (48%), Gaps = 2/134 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ INSPGG + G+AIY+ ++ + ++ +G AAS S++ AG+ A
Sbjct: 75 DVTVNINSPGGDMFEGLAIYNLLREYRGQVTVKVLGLAASAASIIAMAGD--DIQIGRGA 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D + + + +IY G + V++ +D + + S
Sbjct: 133 FLMIHNCWVVAIGNRHDFSAMVEYLEPFDNAMADIYSARSGLDSDSVKQMMDGETYIGGS 192
Query: 194 EACDWGVVDKVLMS 207
+A + G+ D +L S
Sbjct: 193 DAIEKGLADSLLSS 206
>gi|299533259|ref|ZP_07046643.1| peptidase S14 ClpP [Comamonas testosteroni S44]
gi|298718789|gb|EFI59762.1| peptidase S14 ClpP [Comamonas testosteroni S44]
Length = 292
Score = 75.1 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/174 (23%), Positives = 74/174 (42%), Gaps = 13/174 (7%)
Query: 41 KERIVFVTGQI-------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
++R + + I + A I L L A +++ +NSPGG V G+AIY
Sbjct: 42 EDRSISIYDVIGYDYWTGDGVTARRIAGALRSLGA----GPVTVNVNSPGGDVFEGLAIY 97
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
+ ++ + ++ +G AAS S++ AG+ ++H +G +D
Sbjct: 98 NLLREHQGEVTVKVLGLAASAASIIAMAGDTVQIARA--GFFMVHNVWTVAAGNRNDYRE 155
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A + L +IY G + + K +D + + S A D G D++L S
Sbjct: 156 LADWLEPFDSALADIYAARTGADVKAMGKLMDAESWIGGSSAIDQGFADELLPS 209
>gi|307687451|ref|ZP_07629897.1| peptidase S14 ClpP [Clostridium cellulovorans 743B]
Length = 202
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
++INSPGG A IY+ + K ++ G AAS S++ AG++ P + ++
Sbjct: 1 MWINSPGGDCVAAAQIYNMLSNYKGKVTVKIDGIAASAASVIAMAGKE--VLMSPVSMLM 58
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H P G +++++ + ++K + YV G + ++ +D + M+A++A
Sbjct: 59 IHNPMTIAMGDHAEMQKAIDMLAEVKESIINAYVLKTGLSRAKLSHLMDSETWMNANKAV 118
Query: 197 DWGVVDKVLMS 207
+ G D L
Sbjct: 119 ELGFADGTLTR 129
>gi|228915237|ref|ZP_04078832.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228950451|ref|ZP_04112611.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228809266|gb|EEM55727.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228844468|gb|EEM89524.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
Length = 197
Score = 74.7 bits (182), Expect = 7e-12, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P G A D + A+D+ I+ + +Y +N G EE+++
Sbjct: 68 -VVIPSNAFLMIHKPWTYAVGNAIDFRKAAEDLDNIESGIMNVYKENLKEGIEIEEIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKE 151
>gi|77415230|ref|ZP_00791222.1| Clp protease [Streptococcus agalactiae 515]
gi|77158720|gb|EAO70039.1| Clp protease [Streptococcus agalactiae 515]
Length = 85
Score = 74.7 bits (182), Expect = 8e-12, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
Query: 129 ALPNARILLHQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
LPNA ++HQP GG G D+ A+ ++K + L +I N G++ E+V +R
Sbjct: 1 MLPNAEYMIHQPMGGTGGGTQQSDMAIAAEHLLKTRHTLEKILADNSGQSIEKVHDDAER 60
Query: 187 DHIMSASEACDWGVVDKVLMSRI 209
D MSA E D+G +D ++ +
Sbjct: 61 DRWMSAQETLDYGFIDAIMENNN 83
>gi|194247899|dbj|BAG55404.1| ATP-dependent Clp protease-like protein [chlorophyte sp. MBIC11204]
Length = 131
Score = 74.7 bits (182), Expect = 9e-12, Method: Composition-based stats.
Identities = 51/82 (62%), Positives = 66/82 (80%)
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
I+ PIST C+GQAASM SLLL+AGEKG R +LPN+RI+LHQPSGGF GQASDI HA++I
Sbjct: 1 IRNPISTLCVGQAASMASLLLAAGEKGQRRSLPNSRIMLHQPSGGFQGQASDIRIHAEEI 60
Query: 159 VKIKRRLNEIYVKNCGKTYEEV 180
++ +RLN+IY K+ G+ +
Sbjct: 61 TRLSKRLNQIYAKHTGQPENLI 82
>gi|228987127|ref|ZP_04147251.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229156200|ref|ZP_04284297.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228627271|gb|EEK84001.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228772581|gb|EEM21023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
Length = 197
Score = 74.3 bits (181), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/146 (27%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P +G A D + A+D+ I+ + +Y +N G EE+++
Sbjct: 68 -VVVPSNAFLMIHKPWTYAAGNAIDFRKAAEDLDNIESGIMNVYKENLKEGVEIEEIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKD 151
>gi|330963905|gb|EGH64165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 381
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 70/163 (42%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + I + N+ GG + G+AI++ + +
Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAID--DGVSPIVVAFNTIGGDLFDGLAIHNALNRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + NA +++H P +G A D+ + A + +
Sbjct: 98 CTARIDALAASAGSVAACGAHR--MVMASNAMLMIHNPWTYTAGDAEDLRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA G+ D++
Sbjct: 156 EAIIAAYKAKSPDIDEVELRRMVNAETWLTAPEALALGLADEI 198
>gi|304395848|ref|ZP_07377730.1| peptidase S14 ClpP [Pantoea sp. aB]
gi|304356217|gb|EFM20582.1| peptidase S14 ClpP [Pantoea sp. aB]
Length = 282
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/163 (25%), Positives = 77/163 (47%), Gaps = 6/163 (3%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D + A L ++++ INSPGG + G+AIY+ ++ + ++ +G AA
Sbjct: 57 DGVTASRIAGALR---SMNGADVTVNINSPGGDMFEGLAIYNLLREYEGKVTVKVLGLAA 113
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S S++ AG+ A +++H G D+E+ A D+ + + +IY
Sbjct: 114 SAASIIAMAGD--DIQIGRGAFLMIHNCWVYAMGNRHDLEQIAADMEPFDKAMGDIYSHR 171
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
G + +V K +D + + S+A D G D++L S +I +
Sbjct: 172 SGLSTGDVAKMMDSETYIGGSDAVDKGFADRLL-SADEISDDD 213
>gi|313768170|ref|YP_004061601.1| hypothetical protein BpV1_171c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599777|gb|ADQ91798.1| hypothetical protein BpV1_171c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 191
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/170 (21%), Positives = 70/170 (41%), Gaps = 12/170 (7%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE--------NPQKEIS-LYINSPGGVVTAGMAIYDT 95
+F G+I D LE + + I L++ S GG + AG++ +
Sbjct: 23 IFYYGEITDVDILEFIEDFKKLEIDLLKKKAELIGYEPIMYLHVCSEGGDLFAGISAMNI 82
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-FSGQASDIERH 154
++ + + T G S + LL G + R NA +L+HQ S F G+ +++
Sbjct: 83 IEKSRVKVVTIAQGVCCSAATFLLLGGHE--RRIGKNAHVLIHQISTNGFWGKYEELKDE 140
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K+ + + Y + ++ +K + RD + E + VV +
Sbjct: 141 MKSCDKLMDMVTKTYKEKTTIPQKQFKKIMKRDMYLDPQECIKYNVVHSI 190
>gi|161899095|ref|XP_001712774.1| Clp protease [Bigelowiella natans]
gi|75756267|gb|ABA27162.1| Clp protease [Bigelowiella natans]
Length = 237
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 35/190 (18%), Positives = 73/190 (38%), Gaps = 22/190 (11%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP---------GG 84
D+ S L + I+F+ + + L+ QLL+ + +K I+ INS
Sbjct: 55 DVPSFLFENSIIFIGMPLTEITIELLFCQLLWQNNKKSKKYINFIINSYGSHSSYTDINN 114
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF 144
+ + + + D ++F ++ +G++ L R AL N+ P
Sbjct: 115 IFGSYLTLIDLIEFNSYQTNSIVIGKSFGTALFLFLTSSTNKRIALENSSFSFETPFLYS 174
Query: 145 SGQ-----ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG 199
S + ++ I I +K + N Y + + L ++ EA + G
Sbjct: 175 STRSLSNLSNSIIEFNTFINYMKEKFN--YSLHYNNSL------LQSKRYFNSKEALEIG 226
Query: 200 VVDKVLMSRI 209
++D++ S+
Sbjct: 227 IIDEIFTSKN 236
>gi|314940339|ref|ZP_07847503.1| Clp protease [Enterococcus faecium TX0133a04]
gi|314942078|ref|ZP_07848935.1| Clp protease [Enterococcus faecium TX0133C]
gi|314949459|ref|ZP_07852797.1| Clp protease [Enterococcus faecium TX0082]
gi|314953607|ref|ZP_07856504.1| Clp protease [Enterococcus faecium TX0133A]
gi|314994363|ref|ZP_07859655.1| Clp protease [Enterococcus faecium TX0133B]
gi|314997914|ref|ZP_07862814.1| Clp protease [Enterococcus faecium TX0133a01]
gi|313588077|gb|EFR66922.1| Clp protease [Enterococcus faecium TX0133a01]
gi|313591228|gb|EFR70073.1| Clp protease [Enterococcus faecium TX0133B]
gi|313594379|gb|EFR73224.1| Clp protease [Enterococcus faecium TX0133A]
gi|313599143|gb|EFR77988.1| Clp protease [Enterococcus faecium TX0133C]
gi|313640458|gb|EFS05038.1| Clp protease [Enterococcus faecium TX0133a04]
gi|313644157|gb|EFS08737.1| Clp protease [Enterococcus faecium TX0082]
Length = 225
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ Q+EI + INS GG V G+AI + ++ K ++ G AAS S++ AG+
Sbjct: 40 LDSLGDQEEIEVVINSNGGDVFQGIAIGNLLKSNKAKVNVVINGLAASAASIIAMAGDTI 99
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA++++H+ S G D A + I + + Y T E +++ L+
Sbjct: 100 KIYN--NAQLMIHRASTYGEGNVDDFRTIADQLESIDKSVKASYKTRFNGTDEALQELLE 157
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++ M A A +G+VD+++ + ++K
Sbjct: 158 KESFMDAETALSYGLVDEIIDAENSSGTEAK 188
>gi|26989764|ref|NP_745189.1| ClpP protease, putative [Pseudomonas putida KT2440]
gi|24984659|gb|AAN68653.1|AE016495_5 ClpP protease, putative [Pseudomonas putida KT2440]
Length = 387
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 72/163 (44%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V+V G+I A L ++ + I + N+ GG + G+AI++ + +
Sbjct: 42 VYVYGEIGAWGITANQFIQDLKAID--DGTSPIVVAFNTNGGDLFEGLAIHNALSRLGER 99
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + + + + NA +++H P G A D+ R A + +
Sbjct: 100 CTGRVDALAASAGSVAVCGAHRVVMAS--NAMLMIHNPYTWVGGDAEDLRRVADVLDQAF 157
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K E+ + ++ + ++ASEA G+ D+V
Sbjct: 158 EAMIAAYKAKAPNIDDAELRRLVNAESWLTASEAVALGLADEV 200
>gi|260588232|ref|ZP_05854145.1| Clp protease [Blautia hansenii DSM 20583]
gi|260541370|gb|EEX21939.1| Clp protease [Blautia hansenii DSM 20583]
Length = 207
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEI------SLYINSPGGVVTAGMAIY 93
L +R + + +++ + + + E+ I LY+NSPGG VT G+ +
Sbjct: 27 LAQRKIILNDIVDEDIVRNVTLNIFQWNKEDKDIPIEKRKPIWLYLNSPGGDVTEGLNVI 86
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
D ++ + P+ T C ASM + AG K R+ N+ +L+H S +S +
Sbjct: 87 DVIKASQTPVYTVCFATCASMAFHIFIAGHK--RYCFKNSILLIHDGEVSISNSSSKAKD 144
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA-SEACDWGVVDKVL 205
+ I + R+ + ++N T E E D ++ + A + + G VD ++
Sbjct: 145 TMKFIESLDERIKQHILENTKITAEFYESIYDTEYYLFANDKGKELGCVDYII 197
>gi|220925602|ref|YP_002500904.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
gi|219950209|gb|ACL60601.1| peptidase S14 ClpP [Methylobacterium nodulans ORS 2060]
Length = 400
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/163 (23%), Positives = 73/163 (44%), Gaps = 5/163 (3%)
Query: 45 VFVTGQIE---DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ ++G + + +L L +++++ +NS GG+ T G AI+ + +
Sbjct: 10 IVLSGTVGNLFWDDSFDAADVILALAQVGRGQDVTIRLNSGGGIATEGAAIHAALCAHRG 69
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ G AAS S++ AG++ + A +++H PSG G S+ E + + +
Sbjct: 70 RKTIIVEGVAASAASVIAMAGDEIVMARG--AVMMIHDPSGFTFGPVSEHEVAIRMLTSL 127
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ IY + GKT E + + M+ EA G D+V
Sbjct: 128 ATAMAGIYAERSGKTPEAARADMQAELWMAPEEAVAAGYADRV 170
>gi|171913657|ref|ZP_02929127.1| ATP-dependent Clp protease proteolytic subunit [Verrucomicrobium
spinosum DSM 4136]
Length = 462
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 8/178 (4%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI-NSPGGVVTAGMAIYDTMQF 98
+ +R + + G I A + A++ + + + I L I +SPGG V AG I MQ
Sbjct: 215 MSDRRIALNGPISMRTADNVIARINYFNNRDAKLPIFLVIDDSPGGSVMAGYKIVKAMQG 274
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
+ P+ AASM + + + + +A N IL HQ G + + +++
Sbjct: 275 SQAPVHVVVKSFAASMAACIATVAK--HSYAYSNTVILHHQIHSFAGGNLTQQQEWLKEM 332
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDR-----DHIMSASEACDWGVVDKVLMSRIDI 211
+ RRL + G + EE+ K + D A VD ++ +
Sbjct: 333 EEWWRRLADPVAVKMGISREELIKQMYAHASSGDWSEFGDNAQKLKWVDHIVDEIQET 390
>gi|315611967|ref|ZP_07886885.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
sanguinis ATCC 49296]
gi|315315956|gb|EFU63990.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
sanguinis ATCC 49296]
Length = 239
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++ ++INS GG V AG IY ++ ++ +G AAS S++ AG+ P A
Sbjct: 40 DVEIHINSGGGDVYAGSEIYTALRAYSGRVTVKIVGIAASAASVIAMAGD--SVEISPTA 97
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++H S G G + +E A + + + YV GK ++ + +++ A
Sbjct: 98 QIMIHNVSSGVYGDHNALEHEAAVLKGFNKSIASAYVHKTGKALNDLLELMNQTTWFDAE 157
Query: 194 EACDWGVVDKVL 205
A + G DKV+
Sbjct: 158 AAVENGFADKVM 169
>gi|224143118|ref|XP_002335992.1| predicted protein [Populus trichocarpa]
gi|222837882|gb|EEE76247.1| predicted protein [Populus trichocarpa]
Length = 229
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 55/122 (45%), Gaps = 2/122 (1%)
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+ G+AIY+ ++ + ++ +G AAS GS++ AG+ +++H
Sbjct: 34 MFEGLAIYNLLREHEGEVNVKVLGLAASAGSVIAMAGDTVQIARA--GFLMIHNAWVVAM 91
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G +D+ A + + +IY G + + K +D + + + A + G D++L
Sbjct: 92 GNRNDLRELAAWLEPFDAAMGDIYASRTGLEAKAIAKLMDSESWIGGAAAVEQGFADELL 151
Query: 206 MS 207
S
Sbjct: 152 AS 153
>gi|256026839|ref|ZP_05440673.1| putative Clp protease [Fusobacterium sp. D11]
gi|289764832|ref|ZP_06524210.1| hypothetical protein PSAG_00434 [Fusobacterium sp. D11]
gi|289716387|gb|EFD80399.1| hypothetical protein PSAG_00434 [Fusobacterium sp. D11]
Length = 370
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/151 (25%), Positives = 68/151 (45%), Gaps = 6/151 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIY----DTMQFIKPPISTFCMGQAASMGSLLLSA 121
L+ I+L +NSPGG V AIY D + I+ + G AAS S L+
Sbjct: 48 LQKLKNISHINLRVNSPGGDVFEASAIYNLLKDYAKVNNIEITGYIDGLAASAASFLVLC 107
Query: 122 GEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVE 181
K A ++H P G A +++ + + +K + +IY + EE+
Sbjct: 108 ATK--VIMGTGALYMIHNPLTSAYGNAEKLKKQIELLDTVKEAILDIYCTKSKLSREEIS 165
Query: 182 KTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ ++ + ASEA + G VD+++ + +E
Sbjct: 166 EKMNGEKWYRASEALEAGFVDEIVENDNSLE 196
>gi|237803423|ref|ZP_04591008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331025405|gb|EGI05461.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 381
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + I N+ GG + G+AI++ + +
Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAID--DGVSPIIAAFNTIGGDLFDGLAIHNALNRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + NA +++H P +G A D+ + A + +
Sbjct: 98 CTARIDALAASAGSVAACGAHR--MVMASNAMLMIHNPWTYTAGDAEDLRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA G+ D++
Sbjct: 156 EAIIAAYKAKSPNIDEVELRRMVNAETWLTAPEALALGLADEI 198
>gi|69244669|ref|ZP_00602933.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|258615840|ref|ZP_05713610.1| peptidase S14 ClpP [Enterococcus faecium DO]
gi|293560412|ref|ZP_06676904.1| Clp protease [Enterococcus faecium E1162]
gi|294616024|ref|ZP_06695848.1| Clp protease [Enterococcus faecium E1636]
gi|68196260|gb|EAN10689.1| Peptidase S14, ClpP [Enterococcus faecium DO]
gi|291591104|gb|EFF22789.1| Clp protease [Enterococcus faecium E1636]
gi|291605560|gb|EFF35002.1| Clp protease [Enterococcus faecium E1162]
Length = 228
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ Q+EI + INS GG V G+AI + ++ K ++ G AAS S++ AG+
Sbjct: 43 LDSLGDQEEIEVVINSNGGDVFQGIAIGNLLKSNKAKVNVVINGLAASAASIIAMAGDTI 102
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA++++H+ S G D A + I + + Y T E +++ L+
Sbjct: 103 KIYN--NAQLMIHRASTYGEGNVDDFRTIADQLESIDKSVKASYKTRFNGTDEALQELLE 160
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++ M A A +G+VD+++ + ++K
Sbjct: 161 KESFMDAETALSYGLVDEIIDAENSSGTEAK 191
>gi|227534657|ref|ZP_03964706.1| ClpP family protease [Lactobacillus paracasei subsp. paracasei ATCC
25302]
gi|227187704|gb|EEI67771.1| ClpP family protease [Lactobacillus paracasei subsp. paracasei ATCC
25302]
Length = 228
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 61/134 (45%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ +++L I S GG V I + ++ + ++ + A S +++ K
Sbjct: 38 DDGSDVTLEIASDGGEVDPATEICNALRSYRGNVTAKIVSNAYSAATIVAMGANKVQM-- 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A++++H+ S SG + +++ + + + IY GK ++ +D++
Sbjct: 96 APGAKMMIHRASSDASGNSREMDAASGMLKTTDSAIANIYGAKTGKPADDFLALMDKETW 155
Query: 190 MSASEACDWGVVDK 203
+ A +A + G+ D+
Sbjct: 156 LDADQAVELGLADE 169
>gi|217069988|gb|ACJ83354.1| unknown [Medicago truncatula]
Length = 216
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG--------GV 85
D+ S L K RIV++ + + L+ A+ L+L+ ++ K I +YINS G G
Sbjct: 104 DLASYLYKNRIVYLGMSLVPSVTELMVAEFLYLQYDDETKPIYMYINSTGTTKGGEKLGY 163
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
T +A+YD M++IKPPI T C+G A +LLL+AG KG R ALP++ I++
Sbjct: 164 ETEALAVYDLMRYIKPPIFTLCVGNAWGEAALLLAAGAKGNRSALPSSTIMIR 216
>gi|225076698|ref|ZP_03719897.1| hypothetical protein NEIFLAOT_01749 [Neisseria flavescens
NRL30031/H210]
gi|224951974|gb|EEG33183.1| hypothetical protein NEIFLAOT_01749 [Neisseria flavescens
NRL30031/H210]
Length = 281
Score = 73.9 bits (180), Expect = 1e-11, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
KE+ + INSPGG G++IY+ + ++ +G AAS S++ AG++
Sbjct: 74 DKEVVVNINSPGGDYFEGISIYNLLAQHPAKVTVQIVGLAASAASVIAMAGDE--ILMGE 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ +++H G D+ + +I + ++Y + E+ +DR+ +
Sbjct: 132 GSFLMIHNAWSLAIGNRHDLAGSIDTLSQIDDAMADLYAARSSLSKAEIVGMMDRESWIG 191
Query: 192 ASEACDWGVVD-KV----LMSRIDIEEKS 215
S+A + G D ++ + D E+K
Sbjct: 192 KSKALEDGFADGEIDVKEIEQSGDSEQKK 220
>gi|48697263|ref|YP_025030.1| putative ClpP-like protease [Lactobacillus phage phiAT3]
gi|47607154|gb|AAT36490.1| putative ClpP-like protease [Lactobacillus phage phiAT3]
Length = 228
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/130 (20%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+++L I S GG V I + ++ + ++ M A S S++ K P A
Sbjct: 42 DVTLEITSNGGEVDPATEICNALRSYQGNVTAKVMSNAYSAASIVAMGANKVQM--APGA 99
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
++++H+ S SG + +++ + + + +Y GK ++ +D++ + A
Sbjct: 100 KMMIHRASSDASGNSHEMDAASGMLQTTDSAIASLYSAKTGKPADDFLALMDKETWLDAD 159
Query: 194 EACDWGVVDK 203
+A + G+ D+
Sbjct: 160 QAIELGLADE 169
>gi|253795704|ref|YP_003038800.1| putative ATP-dependent Clp protease proteolytic subunit [Candidatus
Hodgkinia cicadicola Dsem]
gi|253740012|gb|ACT34347.1| putative ATP-dependent Clp protease proteolytic subunit [Candidatus
Hodgkinia cicadicola Dsem]
Length = 160
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 51/161 (31%), Positives = 86/161 (53%), Gaps = 2/161 (1%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ V G+I A ++LL + L I+SPGG + AGM +YD +Q + +
Sbjct: 2 LMVAGEITSKRALEARSKLLKTASTRRVL--KLLIDSPGGEIDAGMGLYDALQAVAADVE 59
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T C+GQA S+ SLLL+ G++G R+ + + LH P+ G A + +HA ++ +
Sbjct: 60 TGCVGQAHSIASLLLACGKRGKRWCAASCSVSLHWPTSSAFGSADCVLQHASSALEARAL 119
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ Y+K+C + E+E+ + SA A WG+VD+V+
Sbjct: 120 AVKAYMKHCNRRLAEIEEAMSAGTCASAWRAAAWGLVDRVV 160
>gi|296085707|emb|CBI29506.3| unnamed protein product [Vitis vinifera]
Length = 159
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 11/132 (8%)
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ--------PSG 142
AI +++K PI T C+G A +LLL+AG KG R ALP++ I++ Q P
Sbjct: 29 AIIFCSRYVKSPIFTLCIGNAWGEAALLLAAGAKGNRSALPSSTIVIKQSCPPINLHPIA 88
Query: 143 GFSGQASDIERHA-QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
F GQA+DI+ A +++ +K L ++Y K GK+ E++E + R S S A ++G++
Sbjct: 89 RFQGQATDIDHLARKEVKNVKAELVKLYAKPMGKSPEQIEADIRRPKYFSPSGAVEYGII 148
Query: 202 DKVLMSRIDIEE 213
DKVL + +I+E
Sbjct: 149 DKVLYN--EIKE 158
>gi|254224908|ref|ZP_04918523.1| Protease subunit of ATP-dependent Clp proteases [Vibrio cholerae
V51]
gi|125622596|gb|EAZ50915.1| Protease subunit of ATP-dependent Clp proteases [Vibrio cholerae
V51]
Length = 292
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 29/144 (20%), Positives = 68/144 (47%), Gaps = 3/144 (2%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
K +++YINSPGG + G+AI++ +Q ++ +G AAS S++ A +
Sbjct: 73 DKPVTVYINSPGGDMWEGIAIHNRLQEHSQKVTIKVIGIAASAASIIAMASDDRQIATS- 131
Query: 132 NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
+ +++H G + A + + + ++Y G+ EE+ + +D + +
Sbjct: 132 -SFLMIHNCWTCICGNRHFMREMADTMEEFDMAMADVYADTSGQPVEEMSRMMDAESYIR 190
Query: 192 ASEACDWGVVDKVLMSRIDIEEKS 215
+A + G+ ++ +++E +
Sbjct: 191 GKKAVELGLCTSIIDP-SEVKETN 213
>gi|229017470|ref|ZP_04174371.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
gi|229023686|ref|ZP_04180178.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228737611|gb|EEL88115.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1272]
gi|228743794|gb|EEL93895.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1273]
Length = 197
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/146 (26%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P G + D + A+D+ I+ + +Y +N G EE+++
Sbjct: 68 -VVVPSNAFLMIHKPWTYADGNSIDFRKAAEDLDNIESGIMNVYKENLKEGIEIEEIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKE 151
>gi|149392599|gb|ABR26102.1| ATP-dependent clp protease proteolytic subunit [Oryza sativa Indica
Group]
Length = 77
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+IY K+ G+ +++E+ ++RD M EA DWG++D+V+ +R
Sbjct: 1 KIYQKHTGQEIDKIEQCMERDLFMDPEEARDWGLIDEVIENRP 43
>gi|257881814|ref|ZP_05661467.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257891949|ref|ZP_05671602.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|260562287|ref|ZP_05832801.1| peptidase S14 [Enterococcus faecium C68]
gi|257817472|gb|EEV44800.1| peptidase S14 [Enterococcus faecium 1,231,502]
gi|257828309|gb|EEV54935.1| peptidase S14 [Enterococcus faecium 1,231,410]
gi|260073211|gb|EEW61552.1| peptidase S14 [Enterococcus faecium C68]
Length = 231
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ Q+EI + INS GG V G+AI + ++ K ++ G AAS S++ AG+
Sbjct: 46 LDSLGDQEEIEVVINSNGGDVFQGIAIGNLLKSNKAKVNVVINGLAASAASIIAMAGDTI 105
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA++++H+ S G D A + I + + Y T E +++ L+
Sbjct: 106 KIYN--NAQLMIHRASTYGEGNVDDFRTIADQLESIDKSVKASYKTRFNGTDEALQELLE 163
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++ M A A +G+VD+++ + ++K
Sbjct: 164 KESFMDAETALSYGLVDEIIDAENSSGTEAK 194
>gi|134299068|ref|YP_001112564.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1]
gi|134051768|gb|ABO49739.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1]
Length = 300
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 38/81 (46%)
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
+ P +++H P +G+A D+ A + +IK + Y G++ ++ K +
Sbjct: 4 DEVYMSPVGIMMIHNPWTRVAGEAKDMNHAADVLNEIKDSIITAYQMKTGRSRSKISKMM 63
Query: 185 DRDHIMSASEACDWGVVDKVL 205
D + MSA A G +D +L
Sbjct: 64 DNETWMSAKTAMAEGFIDGIL 84
>gi|167768863|ref|ZP_02440916.1| hypothetical protein ANACOL_00180 [Anaerotruncus colihominis DSM
17241]
gi|167669035|gb|EDS13165.1| hypothetical protein ANACOL_00180 [Anaerotruncus colihominis DSM
17241]
Length = 432
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 33/149 (22%), Positives = 59/149 (39%), Gaps = 7/149 (4%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ---FIKPPISTFCMGQAASMGSLLL 119
L LE K I++ +NS GG I++ ++ + G A S GSL++
Sbjct: 82 LDDLEQIAKCKSITIRMNSYGGDAGVSNTIHNRLRELARNGAELICVVDGVAMSGGSLIM 141
Query: 120 SAGEKGMRFALPNARILLHQPSGGFS--GQASDIERHAQDIVKIKRRLNEIYVKNCGKTY 177
A + P++ I++H+ A ++ + A + IY + G +
Sbjct: 142 CACDTVRVN--PSSLIMIHKCWSYIWGDYNADELRQMADQNDAWDKMQITIYKRKTGLSD 199
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + M+ EA D G D+VL
Sbjct: 200 TVLSHMMADTTYMTGKEAVDKGFADEVLE 228
>gi|33337390|gb|AAQ13361.1|U68753_1 putative ATP-dependent protease proteolytic subunit, ClpP
[Streptococcus pyogenes]
Length = 77
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 41/75 (54%)
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
I G Q +D+ A+ ++K + RL +I +N GKT +++ K +RD+ MSA E
Sbjct: 1 IHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGKTIKQIHKDAERDYWMSAEE 60
Query: 195 ACDWGVVDKVLMSRI 209
+G +D+++ +
Sbjct: 61 TLAYGFIDEIMENNE 75
>gi|261209692|ref|ZP_05924019.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289566819|ref|ZP_06447230.1| peptidase S14 [Enterococcus faecium D344SRF]
gi|260076352|gb|EEW64152.1| peptidase S14 [Enterococcus faecium TC 6]
gi|289161396|gb|EFD09285.1| peptidase S14 [Enterococcus faecium D344SRF]
Length = 231
Score = 73.5 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 76/151 (50%), Gaps = 2/151 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L++ Q+EI + INS GG V G+AI + ++ K I+ G AAS S++ AG+
Sbjct: 46 LDSLGDQEEIEVVINSNGGDVFQGIAIGNLLKSNKAKINVVINGLAASAASIIAMAGDTV 105
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ NA++++H+ S G D A + I + + Y T E +++ L+
Sbjct: 106 KIYN--NAQLMIHRASTYGEGNVDDFRTIADQLESIDKSVKASYKTRFNGTDEALQELLE 163
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
++ M A A +G+VD+++ + ++K
Sbjct: 164 KESFMDAETALSYGLVDEIIDAENSTGTEAK 194
>gi|148268438|ref|YP_001247381.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9]
gi|150394499|ref|YP_001317174.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1]
gi|257793350|ref|ZP_05642329.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|258421077|ref|ZP_05684008.1| peptidase S14 ClpP [Staphylococcus aureus A9719]
gi|258454503|ref|ZP_05702470.1| peptidase S14 ClpP [Staphylococcus aureus A5937]
gi|295407473|ref|ZP_06817268.1| peptidase S14 [Staphylococcus aureus A8819]
gi|297246299|ref|ZP_06930146.1| peptidase S14 [Staphylococcus aureus A8796]
gi|147741507|gb|ABQ49805.1| peptidase S14, ClpP [Staphylococcus aureus subsp. aureus JH9]
gi|149946951|gb|ABR52887.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus JH1]
gi|257787322|gb|EEV25662.1| conserved hypothetical protein [Staphylococcus aureus A9781]
gi|257843025|gb|EEV67443.1| peptidase S14 ClpP [Staphylococcus aureus A9719]
gi|257863360|gb|EEV86121.1| peptidase S14 ClpP [Staphylococcus aureus A5937]
gi|294967676|gb|EFG43710.1| peptidase S14 [Staphylococcus aureus A8819]
gi|297176784|gb|EFH36043.1| peptidase S14 [Staphylococcus aureus A8796]
gi|315129217|gb|EFT85211.1| peptidase S14 ClpP [Staphylococcus aureus subsp. aureus CGS03]
gi|329728115|gb|EGG64558.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
Length = 245
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+A D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEAKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ ++ ++A EA + G D
Sbjct: 148 MMAKETWLNADEAIEQGFAD 167
>gi|331017560|gb|EGH97616.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. lachrymans str. M302278PT]
Length = 335
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + I N+ GG + G+AI++ + +
Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAID--DGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + NA +++H P +G A D+ + A + +
Sbjct: 98 CTARIDALAASAGSVAACGAHR--MVMASNAMLMIHNPWTYTAGDAEDLRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA G+ D++
Sbjct: 156 EAIIAAYKAKSPDIDEVELRRMVNAETWLTAPEALALGLADEI 198
>gi|298375375|ref|ZP_06985332.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Bacteroides sp. 3_1_19]
gi|298267875|gb|EFI09531.1| ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp
2) [Bacteroides sp. 3_1_19]
Length = 438
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 10/179 (5%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ + I+++ A ++ L++E+ +I + INS GG V GM+I+ ++ P
Sbjct: 21 IRLFCDIDEYTANSFNSEFLWVESYIKPSKIRVLINSSGGSVLYGMSIFSVIRNSSIPTE 80
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AASMGS++ +AG+K + IL+ + D E + +++
Sbjct: 81 CINEGLAASMGSIVWAAGDKSLMRDY---AILMIHNPFDSTEDNKDTEGEPDYVKAFRQQ 137
Query: 165 LNEIYVKNCGKTYEEVEKTLD----RD-HIMSASEACDWGVV--DKVLMSRIDIEEKSK 216
+ IY+K G +V++ + D +A EA G++ + VL + EK K
Sbjct: 138 IEMIYMKRWGFNKTKVKELMSGKEGTDGTFFTAEEAVKAGIIPVENVLKTSKQKIEKVK 196
>gi|213968226|ref|ZP_03396370.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
gi|301385994|ref|ZP_07234412.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato Max13]
gi|302058876|ref|ZP_07250417.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato K40]
gi|213926864|gb|EEB60415.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato T1]
Length = 383
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + I N+ GG + G+AI++ + +
Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAID--DGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + NA +++H P +G A D+ + A + +
Sbjct: 98 CTARIDALAASAGSVAACGAHR--MVMASNAMLMIHNPWTYTAGDAEDLRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA G+ D++
Sbjct: 156 EAIIAAYKAKSPDIDEVELRRMVNAETWLTAPEALALGLADEI 198
>gi|28870573|ref|NP_793192.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
gi|28853821|gb|AAO56887.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
syringae pv. tomato str. DC3000]
Length = 381
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 69/163 (42%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + I N+ GG + G+AI++ + +
Sbjct: 40 IYIYGEIGGWGITANQFIQDLKAID--DGVSPIVAAFNTIGGDLFDGLAIHNALNRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + NA +++H P +G A D+ + A + +
Sbjct: 98 CTARIDALAASAGSVAACGAHR--MVMASNAMLMIHNPWTYTAGDAEDLRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA G+ D++
Sbjct: 156 EAIIAAYKAKSPDIDEVELRRMVNAETWLTAPEALALGLADEI 198
>gi|218660752|ref|ZP_03516682.1| ATP-dependent Clp protease proteolytic subunit [Rhizobium etli
IE4771]
Length = 45
Score = 73.1 bits (178), Expect = 2e-11, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+I + G+ +++ K DRD+ +SA EA D+G+V +++ S+ DI
Sbjct: 1 KIMAEATGQPLDKIAKDTDRDYWLSAEEAKDYGLVSRIVTSQADI 45
>gi|327385116|gb|AEA56590.1| ClpP protease [Lactobacillus casei BD-II]
Length = 235
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++S+ INS GG+V AG IY ++ K P++ +G A S SL+ AG+
Sbjct: 36 LINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGD-- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ P +++H S G G D++ A + K + Y+ G + E+ +D
Sbjct: 94 VVAMSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQAEILDLMD 153
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + A + G DK++ + K
Sbjct: 154 STYWLDPQTAIEKGFADKMMFDNAEKPGK 182
>gi|313156843|gb|EFR56283.1| endopeptidase Clp [Alistipes sp. HGB5]
Length = 293
Score = 73.1 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 4/141 (2%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
AE E+ + I S GG V + I+D + + I+T C G AS +++ A G R
Sbjct: 51 AEIDAPEVVVNIRSTGGDVNDALLIHDALTALDAHITTRCYGYTASAATIIAQAASPGCR 110
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
NA L+H G A+++ + + R+ +Y G+ E E + +
Sbjct: 111 EISANALYLIHTAVCATEGNAAELSGKLDLLRQTDTRIAAVYAARSGRPAAEFETLMAEN 170
Query: 188 H----IMSASEACDWGVVDKV 204
+ +S EA G+ D V
Sbjct: 171 NGSGRWLSPEEAVAAGLADVV 191
>gi|9634652|ref|NP_038326.1| ORF25 [Streptococcus phage 7201]
gi|7248482|gb|AAF43518.1|AF145054_26 ORF25 [Streptococcus phage 7201]
Length = 221
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/143 (27%), Positives = 66/143 (46%), Gaps = 2/143 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ +EI+L I S GG V A IY ++ I G AAS S++ AG+
Sbjct: 39 DKDEEITLNIASNGGDVFAASEIYTMLKASGKRIVVNVQGLAASAASVISMAGDTVRI-- 96
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A+I++H+ S G G + D+E + + I + Y G E+ + ++
Sbjct: 97 SPTAQIMIHKASTGIRGNSDDLEHQSAVLSSIDESIALAYEMKTGLKQTELLDLMAKETW 156
Query: 190 MSASEACDWGVVDKVLMSRIDIE 212
++A A D G D+++ S + E
Sbjct: 157 LNAKTAVDKGFADEIMFSDTEEE 179
>gi|307692908|ref|ZP_07635145.1| peptidase S14, ClpP [Ruminococcaceae bacterium D16]
Length = 406
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/144 (23%), Positives = 63/144 (43%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
+ L A + I++ INS GG + G+AI++ ++ + G AAS S++ AG
Sbjct: 66 MEDLAAVKGKSNITIKINSCGGDLYTGIAIHNAIKGLTGHKVVVVEGIAASAASVIACAG 125
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
++ + I +D+++ +D +R + EIY G +++
Sbjct: 126 DEVQVYPGSMVMIHGVAGLLYDYYTLADLKKLQKDFDASERAIAEIYHAKTGLEVDQLRS 185
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
+ R+ M EA D G D +L
Sbjct: 186 MMTRETWMVGQEAIDNGFADTLLT 209
>gi|254510472|ref|ZP_05122539.1| peptidase S14, ClpP [Rhodobacteraceae bacterium KLH11]
gi|221534183|gb|EEE37171.1| peptidase S14, ClpP [Rhodobacteraceae bacterium KLH11]
Length = 342
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 35/158 (22%), Positives = 67/158 (42%), Gaps = 7/158 (4%)
Query: 46 FVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
FV D A + L L ++++ INS GG G+AIY+ + + +
Sbjct: 14 FVGDDFWDEGFTAMQVIDALAML---GRDADVTVRINSGGGYTDDGIAIYNALTAHRGSV 70
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
AAS S++ AG+ + A +++H P+ G A D E+ + + K+
Sbjct: 71 DVIVDAIAASSASIIAMAGDTITMRSG--ALMMIHDPARFTWGDAGDHEKSTEQLNKLAD 128
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
+ +IY + G+ ++ K + + ++ EA
Sbjct: 129 LMADIYAEQTGEDAADIRKEMKDELWLTGKEAVARNFA 166
>gi|293396799|ref|ZP_06641074.1| ClpP protease [Serratia odorifera DSM 4582]
gi|291420706|gb|EFE93960.1| ClpP protease [Serratia odorifera DSM 4582]
Length = 214
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ INSPGG + G+AIY+ ++ + ++ +G AAS S++ AG+ A
Sbjct: 5 DVTVNINSPGGDMFEGLAIYNLLREYQGKVTVKVLGLAASAASIIAMAGD--DIQIGRGA 62
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D + + +IY G E V++ +D + + S
Sbjct: 63 FLMIHNCWVVALGNRHDFASMVDYLEPFDNAMADIYSARSGLDSEAVKQMMDGETYIGGS 122
Query: 194 EACDWGVVDKVL 205
+A + G+ D +L
Sbjct: 123 DAIEKGLADGLL 134
>gi|221504262|gb|EEE29937.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii VEG]
Length = 310
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + L INSPGG VTA +++ D + + T +GQA + +LLL+AG G R A
Sbjct: 139 SCLPPVDLLINSPGGSVTAALSLLDLRHSLPFEVHTTSIGQAGGVAALLLAAGTPGHRRA 198
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC---------------- 173
P+ R L Q G GQA IER +I ++R + C
Sbjct: 199 FPSCRFSLRQIEGRVEGQAETIERETAEIESVQRLVYRHLAAFCTRRGPGDRGSERESHS 258
Query: 174 -----GKTYE-------EVEKTLDRDHIMSASEACDWGVVDKVL 205
G+ E E+++ + + +SA + ++G++D+V+
Sbjct: 259 ERGEAGEDRERLAKREKEIQEDCENELFLSAEQGVEYGLIDQVI 302
Score = 38.1 bits (87), Expect = 0.84, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 47/125 (37%), Gaps = 14/125 (11%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L+ R++F+ G + D +A+ + +QLLFL A ++ D +
Sbjct: 19 LRRRVLFLQGPLTDELASFLASQLLFLAAHAEDEKGG-RDEGERKEDEEDDRGQDRNRAW 77
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ FC+ + + RFA P+ R Q FS D + ++ +
Sbjct: 78 RSDERVFCV------------SSQSDRRFASPHDRKRHRQMPF-FSSLFPDSCKESECLT 124
Query: 160 KIKRR 164
++
Sbjct: 125 SRRQH 129
>gi|237840947|ref|XP_002369771.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii ME49]
gi|211967435|gb|EEB02631.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii ME49]
gi|221483722|gb|EEE22034.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii GT1]
Length = 310
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 28/164 (17%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ + L INSPGG VTA +++ D + + T +GQA + +LLL+AG G R A
Sbjct: 139 SCLPPVDLLINSPGGSVTAALSLLDLRHSLPFEVHTTSIGQAGGVAALLLAAGTPGHRRA 198
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC---------------- 173
P+ R L Q G GQA IER +I ++R + C
Sbjct: 199 FPSCRFSLRQIEGRVEGQAETIERETAEIESVQRLVYRHLAAFCTRRGPGDRGSERESHS 258
Query: 174 -----GKTYE-------EVEKTLDRDHIMSASEACDWGVVDKVL 205
G+ E E+++ + + +SA + ++G++D+V+
Sbjct: 259 ERGEAGEDRERLAKREKEIQEDCENELFLSAEQGVEYGLIDQVI 302
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 24/125 (19%), Positives = 48/125 (38%), Gaps = 14/125 (11%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
L+ R++F+ G + D +A+ + +QLLFL A ++ D +
Sbjct: 19 LRRRVLFLQGPLTDELASFLASQLLFLAAHAEDEKGG-RDEGERKEDEEDDRGQDRNRAW 77
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ FC+ + ++ RFA P+ R Q FS D ++ +
Sbjct: 78 RSDERVFCV------------SSQRDRRFASPHDRKRRRQMPF-FSSLFPDSCTESECLT 124
Query: 160 KIKRR 164
+++
Sbjct: 125 SRRQQ 129
>gi|191637887|ref|YP_001987053.1| Clp protease domain protein [Lactobacillus casei BL23]
gi|190712189|emb|CAQ66195.1| Clp protease domain protein [Lactobacillus casei BL23]
gi|327381956|gb|AEA53432.1| ClpP protease [Lactobacillus casei LC2W]
Length = 235
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++S+ INS GG+V AG IY ++ K P++ +G A S SL+ AG+
Sbjct: 36 LINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGD-- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ P +++H SGG G D+E A + K + Y+ G + E+ +D
Sbjct: 94 VVAMSPAGMMMIHNVSGGQMGDYHDMENAADLLKKSNTAIANAYMAKTGLSQAEILDLMD 153
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + A + G DK++ + K
Sbjct: 154 STYWLDPQTAIEKGFADKMMFDNAEKPGK 182
>gi|239631128|ref|ZP_04674159.1| phage protein [Lactobacillus paracasei subsp. paracasei 8700:2]
gi|239525593|gb|EEQ64594.1| phage protein [Lactobacillus paracasei subsp. paracasei 8700:2]
Length = 232
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/149 (26%), Positives = 69/149 (46%), Gaps = 2/149 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++S+ INS GG+V AG IY ++ K P++ +G A S SL+ AG+
Sbjct: 33 LINKANGDDLSVEINSGGGIVDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGD-- 90
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ P +++H SGG G D+E A + K + Y+ G + E+ +D
Sbjct: 91 VVAMSPAGMMMIHNVSGGQMGDYHDMENAADLLKKSNTAMANAYMAKTGLSQTEILDLMD 150
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + A + G DK++ + K
Sbjct: 151 STYWLDPQTAIEKGFADKMMFDNAEKPGK 179
>gi|153931022|ref|YP_001385267.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397]
gi|152927066|gb|ABS32566.1| putative Clp protease [Clostridium botulinum A str. ATCC 19397]
Length = 247
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 33/136 (24%), Positives = 61/136 (44%), Gaps = 2/136 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
K+++++INS GG V +AI + ++ I+ AAS S++ A K
Sbjct: 58 RDKDVNIHINSGGGDVFESIAICNLLKQHGGNITITIDALAASGASVICMAANK--IVMP 115
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
N+ +++H+ G A D+ + A D+ K+ + Y T EE++ +
Sbjct: 116 KNSMMMIHKAWTWTDGNADDLRKVAADLDKMDSAVLASYKDRFIGTEEELKALIKESSWF 175
Query: 191 SASEACDWGVVDKVLM 206
+A E G D++L
Sbjct: 176 TAEECKSLGFCDEILD 191
>gi|213616068|ref|ZP_03371894.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Salmonella
enterica subsp. enterica serovar Typhi str. E98-2068]
Length = 80
Score = 72.7 bits (177), Expect = 3e-11, Method: Composition-based stats.
Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 2/46 (4%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVF 46
MS+ G ++D+ + LVPMV+EQT+RGERS+DIYSRLLKER++F
Sbjct: 37 MSYSG--ERDNLAPHMALVPMVIEQTSRGERSFDIYSRLLKERVIF 80
>gi|296102063|ref|YP_003612209.1| putative protease [Enterobacter cloacae subsp. cloacae ATCC 13047]
gi|295056522|gb|ADF61260.1| putative protease [Enterobacter cloacae subsp. cloacae ATCC 13047]
Length = 550
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++H+P G G A+D+ +A + K++ L Y + GK+ EE+ L+ + MS SE
Sbjct: 1 MIHKPWGFAGGDATDMRDYADLLDKVESVLIPAYAQKTGKSTEEIAAMLEDETWMSGSEC 60
Query: 196 CDWGVVDKV 204
+ G D+V
Sbjct: 61 LELGFADQV 69
>gi|290891498|ref|ZP_06554556.1| hypothetical protein AWRIB429_1946 [Oenococcus oeni AWRIB429]
gi|290478847|gb|EFD87513.1| hypothetical protein AWRIB429_1946 [Oenococcus oeni AWRIB429]
Length = 256
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 56/139 (40%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++I L INS GG V+A IY ++ + ++ F G AAS S++ AG+K
Sbjct: 40 LNSAASGEDIQLNINSNGGDVSAASTIYSMLKAYQGKVNVFIQGMAASAASVIAMAGDKV 99
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
I + + + A + + Y+ G ++ + +
Sbjct: 100 SMSPTAQLMIHKCLAGVSDPLNSDQLRQIAAQNDSVDLGIANAYMAKTGMNQSDLLQLMS 159
Query: 186 RDHIMSASEACDWGVVDKV 204
M A A D G VD+V
Sbjct: 160 NQTFMDAKTAADKGFVDEV 178
>gi|168490153|ref|ZP_02714352.1| peptidase S14, ClpP [Streptococcus pneumoniae SP195]
gi|168494827|ref|ZP_02718970.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|168494909|ref|ZP_02719052.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|168494962|ref|ZP_02719105.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|168494989|ref|ZP_02719132.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|183571470|gb|EDT91998.1| peptidase S14, ClpP [Streptococcus pneumoniae SP195]
gi|183575135|gb|EDT95663.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|183575170|gb|EDT95698.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|183575218|gb|EDT95746.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
gi|183575291|gb|EDT95819.1| peptidase S14, ClpP [Streptococcus pneumoniae CDC3059-06]
Length = 240
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 65/139 (46%), Gaps = 2/139 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++ ++INS GG V AG IY ++ + ++ +G AAS S++ AG++ P A
Sbjct: 40 DVEVHINSGGGDVYAGSEIYTALRAYQGHVTVKIVGIAASAASVIAMAGDQVEI--SPTA 97
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+I++H S G G + A + + + Y+ GK +++ ++ + A
Sbjct: 98 QIMIHNVSAGVRGDHKALLHEAGVLEGFNKSIAYAYIDKTGKALDDLLDLMEGETWFDAR 157
Query: 194 EACDWGVVDKVLMSRIDIE 212
A + G DKV+ +
Sbjct: 158 SAVNHGFADKVMFESQEAP 176
>gi|315497375|ref|YP_004086179.1| peptidase s14 clpp [Asticcacaulis excentricus CB 48]
gi|315415387|gb|ADU12028.1| peptidase S14 ClpP [Asticcacaulis excentricus CB 48]
Length = 274
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
Query: 73 KEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN 132
+ + INS GG + G+AIY+ + ++ MG AAS S++ + ++ +
Sbjct: 74 NPVEVRINSGGGDMFEGLAIYNLFREHPAKVTVKVMGMAASAASIIAMSADELVMATG-- 131
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+ +++H G G +++ A+ + + EIY +++ +D++ + A
Sbjct: 132 SFLMIHNAWGVVVGNRNEMRAAAETFDEFDLAMAEIYQHRSNIDLADIQAMMDKETWLRA 191
Query: 193 SEACDWGVVD 202
SEA G D
Sbjct: 192 SEAVKQGFAD 201
>gi|70729377|ref|YP_259115.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Pf-5]
gi|68343676|gb|AAY91282.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens Pf-5]
Length = 380
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/163 (22%), Positives = 71/163 (43%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
VFV G+I A L L+ + + + NS GG + G+A+++ + +
Sbjct: 40 VFVYGEIGAWGVTANQFVQDLRALD--DGVSPVVVAFNSIGGDLFDGLAMHNALSRLGER 97
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS S+ + + + A NA +++H P +G A D + A + +
Sbjct: 98 CTGRVDALAASAASVAVCGAHRVVIAA--NAMLMIHNPWTYAAGDAGDFRKVADVLDQTL 155
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K E+ + +D + ++A+EA G+ D+V
Sbjct: 156 EAIIAAYKSKAPDIDDAELRRLVDAETWLTANEAVALGLADEV 198
>gi|225159289|ref|ZP_03725589.1| peptidase S14 ClpP [Opitutaceae bacterium TAV2]
gi|224802142|gb|EEG20414.1| peptidase S14 ClpP [Opitutaceae bacterium TAV2]
Length = 478
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 9/181 (4%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN-SPGGVVTAGMAIYDTMQFIK 100
+R + + G I A I ++ + +N + I + I+ SPGG V AG I M+
Sbjct: 244 DRRIPLNGPISMRTADRIQERIDYFNNQNTEYPIFIVIDASPGGSVMAGYKILKAMEGSA 303
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ T AASM + + + + +A PNA +L HQ G ++ +++ +
Sbjct: 304 APVYTVVKSFAASMAAGITTLSK--QSYAYPNAILLHHQIWTSSGGNLTEQREGVRELEE 361
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTL--DR---DHIMSASEACDWGVVDKVLMS-RIDIEEK 214
RRL G E+ K + +R D I +A D VD ++ + R + ++
Sbjct: 362 WWRRLAAPIAAKMGIGLEDFIKQMYANRSTGDWIAFGDKARDLKWVDHIVTTIREESYDR 421
Query: 215 S 215
+
Sbjct: 422 N 422
>gi|313768387|ref|YP_004062067.1| hypothetical protein MpV1_184c [Micromonas sp. RCC1109 virus MpV1]
gi|312599083|gb|ADQ91107.1| hypothetical protein MpV1_184c [Micromonas sp. RCC1109 virus MpV1]
Length = 189
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE---------NPQKEISLYINSPGGVVTAGMAIYDT 95
+ G I+ A + LE + + +I ++I S GG + AG+ + +
Sbjct: 22 ILFYGDIDRENALEFVEKFKKLEIDLLKKMAELVGYEPQIRVHIMSDGGDIFAGLNMMNV 81
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + + T G S + + G + R NA +L+HQ S F G +++
Sbjct: 82 LERSRVKVITIAQGSCCSAATFVFLGGSE--RRMGRNAYLLIHQISTEFWGNFQELKTEM 139
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K L ++Y+ ++ ++ + +D ++ + + + V
Sbjct: 140 KSTEKFMNMLKKMYLSKTKIPEKKFKRLMKKDIYLTPEKCIKYDIAHVV 188
>gi|228955834|ref|ZP_04117808.1| hypothetical protein bthur0006_51730 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228803843|gb|EEM50488.1| hypothetical protein bthur0006_51730 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
Length = 217
Score = 72.4 bits (176), Expect = 4e-11, Method: Composition-based stats.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 2/136 (1%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + + +NS GG G+ IY+ ++ + + AAS S++ A ++ +
Sbjct: 28 EVRASTVKIKLNSGGGDADQGVEIYNYLKDLDKKVIVEVTSLAASAASIIAMAADEIVMR 87
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+R+++H+ S G DI++ + + IY + GK+ EE+ L+ +
Sbjct: 88 TG--SRMMIHEASTIAYGNKQDIQKTLNALEAYDESIVSIYQQKTGKSREEITDLLEAET 145
Query: 189 IMSASEACDWGVVDKV 204
+A +A G DKV
Sbjct: 146 WFTAEQAVQEGFADKV 161
>gi|191637762|ref|YP_001986928.1| Clp protease domain protein [Lactobacillus casei BL23]
gi|190712064|emb|CAQ66070.1| Clp protease domain protein [Lactobacillus casei BL23]
gi|327381829|gb|AEA53305.1| ClpP protease [Lactobacillus casei LC2W]
gi|327384991|gb|AEA56465.1| ClpP protease [Lactobacillus casei BD-II]
Length = 235
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/149 (24%), Positives = 68/149 (45%), Gaps = 2/149 (1%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++S+ INS GG++ AG IY ++ K P++ +G A S SL+ AG+
Sbjct: 36 LINKANGDDLSVEINSGGGILDAGSEIYTMLRAYKGPVNVNVVGVAYSAASLIAMAGD-- 93
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ P +++H S G G D++ A + K + Y+ G + E+ +D
Sbjct: 94 VVAVSPAGMMMIHNVSSGQMGDYHDMQNAADSLKKSNIAIANAYMAKTGLSQTEILDLMD 153
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + A + G DK++ + K
Sbjct: 154 STYWLDPQTAIEKGFADKMMFDNAEKPGK 182
>gi|298694394|gb|ADI97616.1| Prophage Clp protease-like protein [Staphylococcus aureus subsp.
aureus ED133]
Length = 245
Score = 72.0 bits (175), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+ D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEVKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELVE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ ++ ++A EA + G D
Sbjct: 148 MMAKETWLNADEAIEQGFAD 167
>gi|41189530|ref|NP_958605.1| 77ORF015 [Staphylococcus phage 77]
gi|40557231|gb|AAR87887.1| 77ORF015 [Staphylococcus phage 77]
Length = 245
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+ D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEVKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ ++ ++A EA + G D
Sbjct: 148 MMAKETWLNADEAIEQGFAD 167
>gi|21359778|gb|AAM49612.1|AF513857_3 phiN315 scaffolding protein-like protein [Staphylococcus phage
phi77]
Length = 245
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 4/140 (2%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L LE + +I + N + AG IY ++ K ++ AAS SL+ AG
Sbjct: 32 LTQLEFSDEDVDIIINSNGGN--LVAGSEIYTHLRAHKGKVNVRITAIAASAASLIAMAG 89
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ P AR+++H PS G+ D+ A+ + + + + E Y GK +E+ +
Sbjct: 90 D--HIEMSPVARMMIHNPSSIAQGEVKDLNHAAETLEHVGQIMAEAYAVRAGKNKQELIE 147
Query: 183 TLDRDHIMSASEACDWGVVD 202
+ ++ ++A EA + G D
Sbjct: 148 MMAKETWLNADEAIEQGFAD 167
>gi|225870213|ref|YP_002746160.1| phage ClpP protease [Streptococcus equi subsp. equi 4047]
gi|225699617|emb|CAW93272.1| putative phage ClpP protease [Streptococcus equi subsp. equi 4047]
Length = 221
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+E A I Q + +I L +NS GG+VT G IY ++ K ++ G
Sbjct: 25 MEAASAKSIIEQFPEDNS-----DIVLEVNSNGGLVTVGSEIYTALRNYKGKVTAEITGM 79
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSG-GFSGQASDIERHAQDIVKIKRRLNEIY 169
AAS S+ + +K P A++++H+ SG + D+++ + + + + Y
Sbjct: 80 AASAASVAVMGADK--VVMSPTAQMMVHKALFKWVSGNSDDLDKASNALKSSDKAIVSAY 137
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
V G + + + + + MSA +A + G D+V+
Sbjct: 138 VAKTGLSEDAIMDLMRNETFMSAQDAVEKGFADEVMS 174
>gi|225222|prf||1211235BD ORF 73
Length = 73
Score = 72.0 bits (175), Expect = 6e-11, Method: Composition-based stats.
Identities = 21/70 (30%), Positives = 39/70 (55%)
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++ S + Q + A++++K++ L +YV+ GK V + ++RD MSA+E
Sbjct: 1 MIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATE 60
Query: 195 ACDWGVVDKV 204
A +G+VD V
Sbjct: 61 AQAYGIVDLV 70
>gi|313113728|ref|ZP_07799303.1| Clp protease [Faecalibacterium cf. prausnitzii KLE1255]
gi|310623949|gb|EFQ07329.1| Clp protease [Faecalibacterium cf. prausnitzii KLE1255]
Length = 406
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 28/147 (19%), Positives = 57/147 (38%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L ++++ I S GG V A AI ++ ++ G AS +++ S +
Sbjct: 68 LATIPAMDDLTVRICSGGGDVWAAQAIGAMLENRLGTVTAQIEGICASAATIVASHCKVV 127
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
I + + +++ + ++ + Y K G T EEV +D
Sbjct: 128 KAAEDATYMIHPIKVNPNGFVDMEGLKQLMDALTVMRTNVLNQYAKKTGHTVEEVAAWMD 187
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIE 212
+A+EA + G +D++ S +
Sbjct: 188 ATSWWTAAEAKENGFIDEITESNQTAK 214
>gi|149010630|ref|ZP_01832001.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
gi|149013225|ref|ZP_01834011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP19-BS75]
gi|147762976|gb|EDK69921.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptococcus
pneumoniae SP19-BS75]
gi|147765111|gb|EDK72040.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae SP19-BS75]
Length = 61
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 35/59 (59%)
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ A+ ++K + L +I +N G++ E+V +RD+ MSA E ++G +D+++ +
Sbjct: 1 MAIAAEHLLKTRNTLEKILAENSGQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 59
>gi|17488507|ref|NP_510985.1| Clp protease [Listeria phage 2389]
gi|254933557|ref|ZP_05266916.1| clp protease [Listeria monocytogenes HPB2262]
gi|17402412|emb|CAC85560.1| Clp protease [Listeria phage PSA]
gi|293585121|gb|EFF97153.1| clp protease [Listeria monocytogenes HPB2262]
Length = 248
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 11/165 (6%)
Query: 45 VFVTGQI-----EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+++ G I +D ++ + L + +I++++NS GG V +AI++ ++
Sbjct: 27 LYLYGSIGSGWFDDITSSEVQNFLK----TSSVSQINVHVNSGGGDVFESIAIHNLLKAH 82
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
IS + A S S++ AG++ NA +++H+ +G A + + A D+
Sbjct: 83 PAKISIYIDALAGSGASVIAMAGDE--IIMPSNAMMMIHKAWTIAAGNADEFRKVANDMD 140
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
KI + E Y + EE+ L + ++A E G D +
Sbjct: 141 KIDHAVTESYTERFVGEREELVTLLTNEEWLTAEECVTLGFCDSI 185
>gi|29565981|ref|NP_817552.1| gp103 [Mycobacterium phage Cjw1]
gi|109302855|ref|YP_654857.1| gp102 [Mycobacterium phage 244]
gi|29424706|gb|AAN01717.1| gp103 [Mycobacterium phage Cjw1]
gi|88910146|gb|ABD58077.1| gp102 [Mycobacterium phage 244]
gi|255928421|gb|ACU42037.1| gp103 [Mycobacterium phage Pumpkin]
Length = 286
Score = 71.6 bits (174), Expect = 6e-11, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 38 RLLKERIV----FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
LL+ V FV G + D+ QL E+P ++ + +NSPGG V AGM ++
Sbjct: 102 ELLRNHYVHEYHFVDG-VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLF 160
Query: 94 DTMQFIK-------------PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
D + + G AASMG +LL + ++ R P A +++H+
Sbjct: 161 DQIAAYSTRPWDTSDRPKGTHKTTMTVRGMAASMGGILLQSVDE--RIIGPEAYLMIHEI 218
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDR-DHIMSASEACD 197
S G G+ +IE + R+ +++V G T EE + R D + + EA
Sbjct: 219 SAGTGGKIGEIEDMVGWYRHLCARIAKVFVHRAGGKITAEEFDAGWKRTDWWLDSDEALR 278
Query: 198 WGVVDKV 204
+G VD++
Sbjct: 279 YGFVDRI 285
>gi|167759143|ref|ZP_02431270.1| hypothetical protein CLOSCI_01490 [Clostridium scindens ATCC 35704]
gi|167663261|gb|EDS07391.1| hypothetical protein CLOSCI_01490 [Clostridium scindens ATCC 35704]
Length = 275
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FL + ++I +Y NS GG V AG+AIY+ ++ + G AAS+ S+++ A ++
Sbjct: 66 FLNQLDGYEDIDIYFNSGGGDVFAGLAIYNQLKRYSGHKVGYVDGMAASIASVIMFACDE 125
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEK 182
A+ ++H+P G A D + + + + + ++Y ++ G T ++++
Sbjct: 126 LHFATG--AQAMIHKPLCMAWGNADDFKEVIKQLDLCEDSILDVYEEHLKEGVTRDKIKS 183
Query: 183 TLDRDHIMSASEACDWG--VVDK 203
+ ++ S +E ++ ++D+
Sbjct: 184 FMAKEKWFSGAELAEYFDVLIDE 206
>gi|126470033|dbj|BAF48118.1| hypothetical protein [Rhodococcus rhodochrous]
Length = 133
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 62/131 (47%), Gaps = 2/131 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
L++ + + + D + + I C+G+ G LL+A ++ R + +
Sbjct: 1 LWLCDVDADLEVTLTLLDVLDLMGVEIHAICLGELVGAGVALLTAADR--RDSGVHTVFH 58
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
L +P +SG A+D + + + + L+E CG++ +E+ + I++A +A
Sbjct: 59 LREPRTRYSGYAADAAAYTERQQRHLQTLHERLAHICGRSVDEIAADMRNQRILTAEQAR 118
Query: 197 DWGVVDKVLMS 207
D+G++D V S
Sbjct: 119 DYGLIDTVTES 129
>gi|325914991|ref|ZP_08177323.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria
ATCC 35937]
gi|325538884|gb|EGD10548.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria
ATCC 35937]
Length = 233
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQK--EISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V + G I D + + + L E N I + INS GGVV G+AIY+ +
Sbjct: 29 VMIYGTIGDSLWSESVSALELAEQINQITASTIHVRINSGGGVVADGIAIYNALSQHAAH 88
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
F GQAAS+ SL+ AG + + +A + +++H P +G AS ++A +
Sbjct: 89 KVVFVDGQAASIASLIAMAGNEVVMYAS--SLLMVHAPHTIAAGNASSFRQYATALDAHA 146
Query: 163 RRLNEIYVKNCGKTYEEVEKTLD-RDHIMSASEACDWGV 200
+ E Y GK E + D DH + ++A ++G
Sbjct: 147 GAMLEAYATKTGKRSEVEQLLTDGADHWYTGAQAVEFGF 185
>gi|325914956|ref|ZP_08177288.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria
ATCC 35937]
gi|325538849|gb|EGD10513.1| protease subunit of ATP-dependent protease [Xanthomonas vesicatoria
ATCC 35937]
Length = 728
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 46/159 (28%), Positives = 74/159 (46%), Gaps = 5/159 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQK--EISLYINSPGGVVTAGMAIYDTMQFIKPP 102
V + G I D + + + L E N I + INS GGVV G+AIY+ +
Sbjct: 29 VMIYGTIGDSLWSESVSALELAEQINQITASTIHVRINSGGGVVADGIAIYNALSQHAAH 88
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
F GQAAS+ SL+ AG + + +A + +++H P +G AS ++A +
Sbjct: 89 KVVFVDGQAASIASLIAMAGNEVVMYAS--SLLMVHAPHTIAAGNASSFRQYATALDAHA 146
Query: 163 RRLNEIYVKNCGKTYEEVEKTLD-RDHIMSASEACDWGV 200
+ E Y GK E + D DH + ++A ++G
Sbjct: 147 GAMLEAYATKTGKRSEVEQLLTDGADHWYTGAQAVEFGF 185
>gi|323691287|ref|ZP_08105562.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|323504627|gb|EGB20414.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
Length = 275
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 32/143 (22%), Positives = 73/143 (51%), Gaps = 6/143 (4%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FL + ++I +Y NS GG V AG+AIY+ ++ + G AAS+ S+++ A ++
Sbjct: 66 FLNQLDGYEDIDIYFNSGGGDVFAGLAIYNQLKRYSGHKVGYVDGMAASIASVIMFACDE 125
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEK 182
A+ ++H+P G A D + + + + + ++Y ++ G T ++++
Sbjct: 126 LHFATG--AQAMIHKPLCMAWGNADDFKEVIKQLDLCEDSILDVYEEHLKEGVTRDKIKS 183
Query: 183 TLDRDHIMSASEACDWG--VVDK 203
+ ++ S +E ++ ++D+
Sbjct: 184 FMAKEKWFSGAELAEYFDVLIDE 206
>gi|306828094|ref|ZP_07461357.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
gi|304429631|gb|EFM32677.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pyogenes ATCC 10782]
Length = 238
Score = 71.6 bits (174), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 86/177 (48%), Gaps = 7/177 (3%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+++ G + + ++ +E + ++INS GG + G+AI + ++ + +
Sbjct: 25 LYLAGTVGAWYDGITFKEVRQAMSEISSDTVEVHINSYGGDMFEGIAIKNYLKQLDKTVI 84
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS S++ AG+ + +I++H P +G A ++ + A D+ K +
Sbjct: 85 VVIDGIAASAASVIAMAGDTIKM--PKDTQIMIHNPWTWAAGNAKELRKIADDLEKSQTS 142
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM-----SRIDIEEKSK 216
+ E Y+ + T +E++ LD + ++A EA G+ D+++ S+ ++ S+
Sbjct: 143 IEESYLAHFKGTRDELKALLDEETSLTAEEAVMLGLADELIEETDVVSKDELISDSE 199
>gi|281416390|ref|YP_003347414.1| scaffolding protein [Streptococcus phage Abc2]
gi|226823041|gb|ACO83168.1| scaffolding protein [Streptococcus phage Abc2]
Length = 222
Score = 71.6 bits (174), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 2/138 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
A + +EI+L I S GG V A IY ++ I G AAS S++ AG
Sbjct: 37 ANDEDEEITLNIASNGGDVFAASEIYTMLRDSGKRIVVNIQGLAASAASVISMAG--NTV 94
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A I++H+ S GF G + D+E + + I + Y G E+ + + ++
Sbjct: 95 RISPTAHIMIHKASSGFVGNSDDMEHQSVVLNSIDESIALAYEMKTGLKQSELLELMAKE 154
Query: 188 HIMSASEACDWGVVDKVL 205
++A A D G D+++
Sbjct: 155 TWLNAKTAVDKGFADEIM 172
>gi|194303154|ref|YP_002014569.1| gp101 [Mycobacterium phage Kostya]
gi|194153202|gb|ACF34268.1| gp101 [Mycobacterium phage Kostya]
Length = 268
Score = 71.2 bits (173), Expect = 9e-11, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 38 RLLKERIV----FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
LL+ V FV G + D+ QL E+P ++ + +NSPGG V AGM ++
Sbjct: 84 ELLRNHYVHEYHFVDG-VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLF 142
Query: 94 DTMQFIK-------------PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
D + + G AASMG +LL + ++ R P A +++H+
Sbjct: 143 DQIAAYSTRPWDTSDRPKGTHKTTMTVRGMAASMGGILLQSVDE--RIIGPEAYLMIHEI 200
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDR-DHIMSASEACD 197
S G G+ +IE + R+ +++V G T EE + R D + + EA
Sbjct: 201 SAGTGGKIGEIEDMVGWYRHLCARIAKVFVHRAGGKITAEEFDAGWKRTDWWLDSDEALR 260
Query: 198 WGVVDKV 204
+G VD++
Sbjct: 261 YGFVDRI 267
>gi|66395463|ref|YP_239801.1| ORF013 [Staphylococcus phage 2638A]
gi|62635890|gb|AAX91001.1| ORF013 [Staphylococcus phage 2638A]
Length = 299
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/161 (21%), Positives = 71/161 (44%), Gaps = 3/161 (1%)
Query: 44 IVFVTGQI-EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ + G + D I + + + K I + + S GG G+ IY+ ++ +K
Sbjct: 45 ILTLNGVVASDDFENTISHKKIEAALKGSDKNIVIKLASGGGDAFEGINIYNYLKSLKNH 104
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
++ AAS S++ AG+K + N +++H+ S G +DI + + +
Sbjct: 105 VTIEITSIAASAASIIAMAGDKIVMHTGSN--MMIHEASTFAFGSKTDIRKTLNALESVD 162
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ + ++Y G E+ + ++ M+A EA D+
Sbjct: 163 KSIVDVYYNRTGVDKNEIIDMMAKETWMTADEAIKQKFADE 203
>gi|77999991|ref|YP_358763.1| putative protease [Lactobacillus phage Lc-Nu]
gi|37826007|gb|AAR04628.1| putative protease [Lactobacillus phage Lc-Nu]
Length = 228
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 59/134 (44%), Gaps = 2/134 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
N ++ L I S GG V + + ++ K ++ + A S +++ K
Sbjct: 38 NDGSDVVLEIASDGGEVDPATEVCNALRDYKGNVTAKIVSNAYSAATIVAMGANKVQM-- 95
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A++++H+ S SG + +++ + + + +Y GK E +D++
Sbjct: 96 APGAKMMIHRASSDASGNSHEMDAASGMLQTTDSAIASLYSAKTGKPANEFLALMDKETW 155
Query: 190 MSASEACDWGVVDK 203
+ A +A + G+ D+
Sbjct: 156 LDADDAINLGLADE 169
>gi|218889559|ref|YP_002438423.1| chaperone with DnaK; heat shock protein [Pseudomonas aeruginosa
LESB58]
gi|218769782|emb|CAW25542.1| chaperone with DnaK; heat shock protein [Pseudomonas aeruginosa
LESB58]
Length = 578
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 41/79 (51%)
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
+ NA +++H+P G G+A D+ R+A + KI+ + Y+ GK+ E+++ L
Sbjct: 4 DVIHIPENAMMMVHRPWGIQGGEADDMRRYADLLEKIEGTMVAAYMAKTGKSEEDIKALL 63
Query: 185 DRDHIMSASEACDWGVVDK 203
+ M EA + G D+
Sbjct: 64 KAETWMDGREAVEAGFADQ 82
>gi|283478672|emb|CAY74588.1| prophage LambdaSa04, ClpP endopeptidase (S14) family, non-peptidase
homologue, putative [Erwinia pyrifoliae DSM 12163]
Length = 282
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/161 (22%), Positives = 75/161 (46%), Gaps = 6/161 (3%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
A+ I A L + E+ I NSPGG + G+AIY+ ++ + ++ +G AAS
Sbjct: 60 TASRIAAALRSIGGEDVTVNI----NSPGGDMFEGLAIYNLLREYEGKVTVKVLGLAASA 115
Query: 115 GSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG 174
S++ AG++ A +++H G ++ + A ++ R +N+IY G
Sbjct: 116 ASIIAMAGDEVQI--GRAAFLMIHNCWTFAMGNRHEMAKIAAELEPFDRAMNDIYGARTG 173
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+E ++ + + SE+ + D++L + +++
Sbjct: 174 LDAATIETMMNAETYIGGSESVEKXFADRLLTADEILDDDE 214
>gi|229006052|ref|ZP_04163740.1| Clp protease [Bacillus mycoides Rock1-4]
gi|228755128|gb|EEM04485.1| Clp protease [Bacillus mycoides Rock1-4]
Length = 221
Score = 70.8 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 62/132 (46%), Gaps = 2/132 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++++NS GG V +AI + ++ I G AAS S++ A +K N
Sbjct: 31 INVHVNSGGGDVFESIAISNLLKNHSAQIVIHIDGLAASGASVIAMAADK--IIMPKNTM 88
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ +G A D+ + A + KI + E Y E+E+ L + ++A E
Sbjct: 89 MMIHRAWTYAAGNAEDLRKVADRLDKIDTAVTESYTSRFVGERNELEELLAEETWLTAEE 148
Query: 195 ACDWGVVDKVLM 206
+G D+++
Sbjct: 149 CKTFGFCDEIVD 160
>gi|83944470|ref|ZP_00956923.1| putative ClpP-like protease [Sulfitobacter sp. EE-36]
gi|83844672|gb|EAP82556.1| putative ClpP-like protease [Sulfitobacter sp. EE-36]
Length = 284
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+++ +NSPGG G+AIY+ ++ P++ +G AAS S++ AG++
Sbjct: 75 PVTVNVNSPGGDYFEGLAIYNLLREHPEPVTVNILGIAASAASVIAMAGDEVRIARA--G 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G +G + A + EIY G ++ LDR+ +
Sbjct: 133 FLMIHNTWIGAAGDRHGLREVADWLEPFDATAVEIYAARTGIATADLATMLDRETWIGGQ 192
Query: 194 EACDWGVVDKVL 205
A D G D +L
Sbjct: 193 SAIDQGFADTLL 204
>gi|239631906|ref|ZP_04674937.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
gi|239526371|gb|EEQ65372.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
paracasei subsp. paracasei 8700:2]
Length = 241
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 2/138 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
++ +++ L INSPGG V AG + ++ I T +G AAS S++ AG+K
Sbjct: 41 SKASGQDVVLEINSPGGDVFAGSEMATAIKNYSGSIITNIVGLAASAASVVALAGDKVEM 100
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A++++H+ S +G + Q + I + L ++YV G + +V + +
Sbjct: 101 --APTAQLMIHRASTSANGNVDVLNSAGQSLDSIDQSLVDVYVAKTGMSPSDVYNMMVNE 158
Query: 188 HIMSASEACDWGVVDKVL 205
++A EA + G D ++
Sbjct: 159 TWINAKEAVEKGFADDIM 176
>gi|320006269|gb|ADW01298.1| protease subunit of ATP-dependent Clp protease [Lactobacillus phage
Sha1]
Length = 245
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/160 (22%), Positives = 72/160 (45%), Gaps = 6/160 (3%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
F ++ A +L ++ + + + + I S GG V A IY ++ ++
Sbjct: 22 FFGMP---AVSPSGVADILNDDSGDDEA-LEVDIASNGGDVFAASEIYTMLKNYAGNVTI 77
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
G AAS S++ AG+ P A+I++H+ +G A D+E A + I + +
Sbjct: 78 NIQGLAASAASVVAMAGD--HINISPTAQIMIHKAWSQPAGNADDLEHEASILNGIDQSI 135
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
Y G ++ + + + ++AS+A D G D+++
Sbjct: 136 ASAYEAKTGMDQADLLQLMANETWLTASDAVDKGFADEIM 175
>gi|220916410|ref|YP_002491714.1| peptidase S14 ClpP [Anaeromyxobacter dehalogenans 2CP-1]
gi|219954264|gb|ACL64648.1| peptidase S14 ClpP [Anaeromyxobacter dehalogenans 2CP-1]
Length = 260
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 16/182 (8%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICAQLL--FLEAENPQKEISLYINSPGGVVTAGMA 91
D+Y L V VT +IE I AQ L+ + + ++++INSPGG V G A
Sbjct: 42 DVY--LYD---VIVTPEIEALFGVGISAQGFREQLKQADGARRVNVHINSPGGDVDQGKA 96
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
+ ++ ++ + A+ + +++ G P A ++H+ SGG G A+D
Sbjct: 97 MLSGLRSLRAGEKVAVVEGLAASAATVVAMGA-DRVVMEPEAVFMIHEASGGMWGSAADH 155
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD--------HIMSASEACDWGVVDK 203
E+ A+ + + +Y K G + + + M A+ A + G D+
Sbjct: 156 EKFAEILRMDNAAVRALYAKKTGLDDGRIAELMAAQEPGGTVPGTYMDAARARELGFADE 215
Query: 204 VL 205
VL
Sbjct: 216 VL 217
>gi|168236909|ref|ZP_02661967.1| ClpP protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194734371|ref|YP_002117151.1| ClpP protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194709873|gb|ACF89094.1| ClpP protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290051|gb|EDY29410.1| ClpP protease [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 282
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++ INSPGG + G+AIY+ ++ + ++ +G AAS S++ AG+ A
Sbjct: 75 DVTVNINSPGGDMFEGLAIYNLLREYQGKVTVKVLGIAASAASVIAMAGD--DIQIGRGA 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G D + + + +IY G V+K +D + + S
Sbjct: 133 FLMIHNCWVVAMGNRHDFAELSASLEPFDNAMADIYAARSGLDMVTVQKLMDAESYIGGS 192
Query: 194 EACDWGVVDKVLM 206
+A + G+ D +L
Sbjct: 193 DAVEKGLADSLLS 205
>gi|9632423|ref|NP_049395.1| putative scaffolding protein [Streptococcus phage DT1]
gi|4530143|gb|AAD21883.1| putative scaffolding protein [Streptococcus phage DT1]
Length = 222
Score = 70.4 bits (171), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/136 (27%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ +EI+L I S GG V A IY ++ I G AAS S++ AG
Sbjct: 39 DEDEEITLNIASNGGDVFAASEIYTMLRDSGKRIVVNIQGLAASAASVISMAG--NTVRI 96
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A I++H+ S GF G + D+E + + I + Y G E+ + + ++
Sbjct: 97 SPTAHIMIHKASSGFVGNSDDMEHQSVVLNSIDESIALAYEMKTGLKQSELLELMAKETW 156
Query: 190 MSASEACDWGVVDKVL 205
++A A D G D+++
Sbjct: 157 LNAKTAVDKGFADEIM 172
>gi|194303396|ref|YP_002014421.1| gp100 [Mycobacterium phage Porky]
gi|194150881|gb|ACF33917.1| gp100 [Mycobacterium phage Porky]
Length = 259
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 23/187 (12%)
Query: 38 RLLKERIV----FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIY 93
LL+ V FV G + D+ QL E+P ++ + +NSPGG V AGM ++
Sbjct: 75 ELLRNHYVHEYHFVDG-VNDYSVEACLNQLALWHREDPNCDMHIVMNSPGGSVIAGMHLF 133
Query: 94 DTMQFIK-------------PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQP 140
D + + G AASMG +LL + ++ R P A +++H+
Sbjct: 134 DQIAAYSTRPWDTSDRPKGTHKTTMTVRGMAASMGGILLQSVDE--RIIGPEAYLMIHEI 191
Query: 141 SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDR-DHIMSASEACD 197
S G G+ +IE + R+ +++V G T EE + R D + + EA
Sbjct: 192 SAGTGGKIGEIEDMVGWYRHLCARIAKVFVHRAGGKITAEEFDAGWKRTDWWLDSDEALR 251
Query: 198 WGVVDKV 204
+G VD++
Sbjct: 252 YGFVDRI 258
>gi|228899164|ref|ZP_04063435.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228860497|gb|EEN04886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
Length = 197
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 9 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 67
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P G A+ + + A+D+ ++ + +Y +N G E +++
Sbjct: 68 -VVVPSNAFLMVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEMEVIQQL 126
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 127 VDAETWLSGEEAEKYFNI-EVVEAKE 151
>gi|168211352|ref|ZP_02636977.1| serine protease [Clostridium perfringens B str. ATCC 3626]
gi|170710641|gb|EDT22823.1| serine protease [Clostridium perfringens B str. ATCC 3626]
Length = 255
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 70/146 (47%), Gaps = 7/146 (4%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI--KPPISTFCMGQAASMGSLLLSAGE 123
LE+ +++YINSPGG V G AI++ ++ I+ + G AAS+ S++ AG
Sbjct: 45 LESLGDISTLNVYINSPGGDVFEGYAIFNVLRRKADNCQINVYIDGMAASIASVIAMAGT 104
Query: 124 KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT 183
NA +++H+ S G G + + + + + KI + + Y+ ++
Sbjct: 105 --HISMPSNAVMMIHRASIGIYGNSDVLAKGIKFLEKIDNNMKQTYINRSNGKLDDSTLD 162
Query: 184 ---LDRDHIMSASEACDWGVVDKVLM 206
+ D ++A E ++G+ D+V
Sbjct: 163 FLFSNGDTWLTAQECLEYGLCDEVTE 188
>gi|196232547|ref|ZP_03131399.1| peptidase S14 ClpP [Chthoniobacter flavus Ellin428]
gi|196223309|gb|EDY17827.1| peptidase S14 ClpP [Chthoniobacter flavus Ellin428]
Length = 439
Score = 70.4 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 8/172 (4%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI-NSPGGVVTAGMAIYDTMQF 98
L +R + + G I A +C+++ + +N I + I +SPGG V AG I ++M
Sbjct: 202 LTDRRIPLNGLISPATADFVCSRIDYFNNKNKDWPIFIVIDDSPGGSVMAGNKILESMHS 261
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
P+ AASM + + A +A PNA IL HQ S G G ++ +++
Sbjct: 262 STAPVYVVVKTFAASMAATI--ATLAPRSYAYPNAVILHHQISNGMMGNLTEQREGLKNL 319
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTL-----DRDHIMSASEACDWGVVDKVL 205
+ +R+ G + ++ K + D EA +D V+
Sbjct: 320 EQWWKRMATPIAAKMGISTDDFVKQMYTHAASGDWQEFGDEAVKLKWIDMVV 371
>gi|300766684|ref|ZP_07076601.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
gi|300495784|gb|EFK30935.1| ATP-dependent Clp protease proteolytic subunit [Lactobacillus
plantarum subsp. plantarum ATCC 14917]
Length = 247
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ I S GG V A IY ++ ++ G AAS S++ AG+ P A+I+
Sbjct: 56 VDIASNGGDVFAASEIYTMLKNYAGNVTVNIQGLAASAASVVAMAGD--HINISPTAQIM 113
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H+ +G A D+E A + I + + Y G ++ + + + ++AS+A
Sbjct: 114 IHKAWSQPAGNADDLEHEASILNGIDQSIASAYEAKTGMDQADLLQLMANETWLTASDAV 173
Query: 197 DWGVVDKVLMSRID 210
D G D+++ +
Sbjct: 174 DKGFADEIMFTNDQ 187
>gi|289608536|emb|CBI60575.1| unnamed protein product [Sordaria macrospora]
Length = 99
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/90 (34%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT-------YEEVEKTLDRDH 188
++HQP GG GQASDI +A I +I+ ++N+I + K+ + ++RD
Sbjct: 1 MVHQPLGGTRGQASDILIYANQIQRIREQINKIVQSHINKSFGFEKYDLAAISDMMERDK 60
Query: 189 IMSASEACDWGVVDKVLMSR--IDIEEKSK 216
++A EA + GVVD++L R ++E+K+K
Sbjct: 61 YLTAEEAVELGVVDQILDRRVKDEVEKKTK 90
>gi|76798617|ref|ZP_00780844.1| phage protein [Streptococcus agalactiae 18RS21]
gi|76586016|gb|EAO62547.1| phage protein [Streptococcus agalactiae 18RS21]
Length = 243
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 2/133 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+I + INS GG V AG IY T++ + ++ +G AAS S++ AG+ +
Sbjct: 37 DNSDIEVLINSGGGDVYAGSEIYTTLKSYQGNVTVKIVGIAASAASVIAMAGD--VVEIS 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H S SG + A + + YV G E+ + +
Sbjct: 95 PTAQLMIHNVSTTVSGDHKQMLHEAGVLENYNISIANAYVNKTGLEMNELLDLMSTETWF 154
Query: 191 SASEACDWGVVDK 203
+A +A + G DK
Sbjct: 155 NAQQAVEKGFADK 167
>gi|169841259|ref|ZP_02874372.1| ATP-dependent Clp protease, proteolytic subunit [candidate division
TM7 single-cell isolate TM7a]
Length = 62
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 34/55 (61%)
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+++I ++K ++I + GK+ EE+ +RD+ MS EA ++G++DK+L
Sbjct: 8 YSDSSKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYGLIDKIL 62
>gi|293570878|ref|ZP_06681924.1| Clp protease [Enterococcus faecium E980]
gi|291609052|gb|EFF38328.1| Clp protease [Enterococcus faecium E980]
Length = 225
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E E+ L I+S GG V A IY ++ +S + AAS S++ A E
Sbjct: 38 EAAGDEVELDISSNGGDVLAASEIYTAIRAYPGKVSGNIVSIAASAASVIACACEP--LR 95
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
P A I++H SG A +++ +A+ + + + Y G +++ + +D
Sbjct: 96 ISPTAHIMIHNAWVTTSGNAEELKANAEMLSSVDESIVNAYEIKTGLDRKKLADLMAKDT 155
Query: 189 IMSASEACDWGVVDKVL 205
++A A G D+++
Sbjct: 156 WLNAQTAVAEGFADEIM 172
>gi|83955408|ref|ZP_00964039.1| putative ClpP-like protease [Sulfitobacter sp. NAS-14.1]
gi|83840052|gb|EAP79227.1| putative ClpP-like protease [Sulfitobacter sp. NAS-14.1]
Length = 284
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/132 (25%), Positives = 59/132 (44%), Gaps = 2/132 (1%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+++ +NSPGG G+AIY+ ++ P++ +G AAS S++ AG++
Sbjct: 75 PVTVNVNSPGGDYFEGLAIYNLLREHPEPVTVNILGIAASAASVIAMAGDEVRIARA--G 132
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+++H G +G + A + EIY G ++ LDR+ +
Sbjct: 133 FLMIHNTWIGAAGDRHGLREVADWLEPFDATAVEIYAARTGIATADLAMMLDRETWIGGQ 192
Query: 194 EACDWGVVDKVL 205
A D G D +L
Sbjct: 193 SAIDQGFADTLL 204
>gi|293369840|ref|ZP_06616413.1| Clp protease [Bacteroides ovatus SD CMC 3f]
gi|292635017|gb|EFF53536.1| Clp protease [Bacteroides ovatus SD CMC 3f]
Length = 353
Score = 70.0 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 9/144 (6%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP-N 132
++ +YINSPGG I + ++ I+ AS + + F++P N
Sbjct: 44 DVHIYINSPGGECFEANEIVNVIKRFPGKITGEGGALVASAATYIAINCT---SFSMPAN 100
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIK-RRLNEIYVKNCGKTYEEVEKTLDR-DHIM 190
++HQ SGG G+ +DIE + + K+ LN K K ++++ D D+ M
Sbjct: 101 GLFMIHQVSGGACGKVADIESTLEVMRKLNEHYLNAFLSKCTDK--KKIKDAWDNGDYWM 158
Query: 191 SASEACDWGVVDKVLMSRIDIEEK 214
SA EA + G V +V + +++
Sbjct: 159 SAQEAKENGFVTEV-TGKAKVDKA 181
>gi|83641941|emb|CAJ46674.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
glutinosa]
Length = 66
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ A++++K++ L +YV+ GK V + ++RD MSA+EA +G+VD V
Sbjct: 9 EFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMSATEAQAYGIVDLV 63
>gi|308180862|ref|YP_003924990.1| protease subunit of ATP-dependent Clp protease [Lactobacillus
plantarum subsp. plantarum ST-III]
gi|308046353|gb|ADN98896.1| protease subunit of ATP-dependent Clp protease [Lactobacillus
plantarum subsp. plantarum ST-III]
Length = 251
Score = 69.7 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/129 (25%), Positives = 61/129 (47%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ I S GG V A IY ++ ++ G AAS S++ AG+ P A+I+
Sbjct: 55 VDIASNGGDVFAASEIYTMLKNYAGDVTVNIQGLAASAASVVAMAGD--HINISPTAQIM 112
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+H+ +G A D+E A + I + + Y G ++ + + + ++AS+A
Sbjct: 113 IHKAWSQPAGNADDLEHEASILNGIDQSIASAYEAKTGMDQADLLQLMANETWLTASDAV 172
Query: 197 DWGVVDKVL 205
D G D+++
Sbjct: 173 DKGFADEIM 181
>gi|242243098|ref|ZP_04797543.1| bacteriophage protease [Staphylococcus epidermidis W23144]
gi|242233446|gb|EES35758.1| bacteriophage protease [Staphylococcus epidermidis W23144]
Length = 248
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 29/139 (20%), Positives = 66/139 (47%), Gaps = 2/139 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I + +NSPGG G+ IY+ ++ + + AAS S++ ++ + +
Sbjct: 56 IRIKLNSPGGNAFDGLEIYNYLKDLDAHVIVEVTALAASAASIIAMGADEVIMRTG--ST 113
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H S G ++ + + + KI + ++Y + G + +E+++ L+ + +ASE
Sbjct: 114 MMIHNASTITYGNKDEMLKVYEYLAKIDTSIIDVYKEKTGLSTDEIKEMLNNETWFTASE 173
Query: 195 ACDWGVVDKVLMSRIDIEE 213
A + G D + +E
Sbjct: 174 AVEKGFADSYETQTKEEKE 192
>gi|257469574|ref|ZP_05633666.1| putative Clp protease [Fusobacterium ulcerans ATCC 49185]
gi|317063812|ref|ZP_07928297.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
gi|313689488|gb|EFS26323.1| predicted protein [Fusobacterium ulcerans ATCC 49185]
Length = 252
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 6/134 (4%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E KE+ +YINS GG V AG+AIY+ ++ + + G AAS S + AG+
Sbjct: 57 EANGKELDIYINSGGGSVFAGIAIYNMLKRYSGVKTVYVDGLAASAASFIAMAGD--TII 114
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY----VKNCGKTYEEVEKTL 184
NA +++H+ G +D+ + + K + +IY +N E +
Sbjct: 115 VPKNAYLMIHRAMTIAFGNINDMHSAIELLEKTDNTIADIYMEKKAENEDIEKETFINLM 174
Query: 185 DRDHIMSASEACDW 198
D++ ++ +EA +
Sbjct: 175 DKETWLTGTEAVKY 188
>gi|258644603|dbj|BAI39853.1| ATP-dependent protease subunit-like [Oryza sativa Indica Group]
Length = 144
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 16/67 (23%), Positives = 32/67 (47%)
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
+ + + +++ K++ + +Y GK + V + ++RD MSA EA
Sbjct: 55 RSSRAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMSADEAKA 114
Query: 198 WGVVDKV 204
+G+VD V
Sbjct: 115 YGLVDIV 121
>gi|148257821|ref|YP_001242406.1| putative peptidase S14, ClpP [Bradyrhizobium sp. BTAi1]
gi|146409994|gb|ABQ38500.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bradyrhizobium
sp. BTAi1]
Length = 684
Score = 69.3 bits (168), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 13/169 (7%)
Query: 45 VFVTGQIED-------HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+++ G + D A + L+ L + I NS GG+ T GMAIY ++
Sbjct: 13 IYLYGDVGDPWGWGDGFTAEQVAKALVELGGGDATVRI----NSGGGIATEGMAIYSLLK 68
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
I+ G AAS SL+ AG++ A +++H PSG G A E A
Sbjct: 69 AHPGKITVAIDGIAASAASLIAMAGDEIEMRTG--AMMMIHDPSGYTRGPAKVHEDAAAF 126
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ K+ +Y G +EV K + ++A EA G K +
Sbjct: 127 LHKLADNYASVYAIRAGMDAKEVRKLMLATTWLTAGEAVTQGFATKQID 175
>gi|161899459|ref|XP_001712963.1| Clp protease [Bigelowiella natans]
gi|1401209|gb|AAD05370.1| ATP-dependent clp protease proteolytic subunit homolog
[Bigelowiella natans]
gi|75756458|gb|ABA27351.1| Clp protease [Bigelowiella natans]
Length = 226
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
I ++ K + +F+ G + D ++ I + LLF +N Q ISL +NS G +T + I +
Sbjct: 46 IAQKMSKTKSIFIYGYLNDSLSIQIISNLLFFNGKNEQG-ISLILNSNGSNITDSININE 104
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
M +I P + T +G L+L+ G+K R PNA+I + + G+ + I+
Sbjct: 105 CMNYIYPEVYTVGIGNIMDSIILILANGKKDSRAIFPNAKISISKKLLRSYGKYNTIQEK 164
Query: 155 AQDIVKIKRRLNEIY---VKNCGKTY--EEVEKTL--DRDHIM--SASEACDWGVVDKVL 205
+V + I + + + L D++ S EA +G++DKVL
Sbjct: 165 CVFLVHASFLFSRILNHIALETHYSAVNDRKKNDLFIDKNRFFSISNKEALSYGIIDKVL 224
Query: 206 M 206
Sbjct: 225 N 225
>gi|193875740|gb|ACF24506.1| chloroplast ATP-dependent Clp protease proteolytic subunit 4
[Gymnochlora stellata]
Length = 184
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 8/170 (4%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY-------INSPGGVVTAGMAIYDTM 96
I+++ QI +L++ + + I++Y + +IYD M
Sbjct: 14 IIYLNDQINIENLKFFTGKLIYFKKNKTKGIINIYHGKTNNKFAISDNKIDVVTSIYDLM 73
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF-SGQASDIERHA 155
I T C+G A L++S G+K R++L N+ + S + A + +
Sbjct: 74 NIYGNQIHTTCLGIAEDEFGLIMSFGKKKSRYSLINSTFYFNNLSMYYKYDNALSLGLYK 133
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+I K + I K + + +S+ EA + G++D ++
Sbjct: 134 SEIQKQFFVMLNILSSQTSKPVVYLWEYYSYPKFLSSIEAKELGIIDTII 183
>gi|153811342|ref|ZP_01964010.1| hypothetical protein RUMOBE_01734 [Ruminococcus obeum ATCC 29174]
gi|149832469|gb|EDM87553.1| hypothetical protein RUMOBE_01734 [Ruminococcus obeum ATCC 29174]
Length = 252
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
F+ P E+++YINS GG V AG+AI+ + + G AAS+ S++L A +
Sbjct: 62 FMNQIEPGAELTVYINSGGGDVFAGIAIHSILSRHTGHKTGIVDGMAASIASVILMACDS 121
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEK 182
+ + A+I++H+P G A D +R ++ K ++ + +IY+ G T E+V
Sbjct: 122 IVMSSG--AQIMIHKPLSWAYGNADDFQRLISELDKCQKSITDIYMGRVKEGVTEEQVTD 179
Query: 183 TLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++ + M+A EA + + D + R +
Sbjct: 180 LINAETWMTAEEAKE--IFDVQIEERPAV 206
>gi|167754301|ref|ZP_02426428.1| hypothetical protein ALIPUT_02594 [Alistipes putredinis DSM 17216]
gi|167658926|gb|EDS03056.1| hypothetical protein ALIPUT_02594 [Alistipes putredinis DSM 17216]
Length = 418
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 13/177 (7%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ G+I + A FLE I + INS GG V GM +Y +Q P
Sbjct: 21 IRFFGRITEESAGRFSEAFDFLENIVRPSLIRVLINSEGGSVLHGMTVYAAIQNASVPTE 80
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AASMGS++ +AG+K F +++H P ++ + +
Sbjct: 81 CVIEGMAASMGSVIWAAGDK--SFMRDYGILMIHNPFLPDEND----GEPSELVKAFTAQ 134
Query: 165 LNEIYVKNCGKTYEEVEKTLD----RD-HIMSASEACDWGVV--DKVLMSRIDIEEK 214
+ IY K G ++E+V +D +D A+ A G++ VL + + +K
Sbjct: 135 IETIYRKRFGLSHEKVRAIMDGAAGQDGTFFDAAAAVKAGIIPESHVLRTSKQLRDK 191
>gi|167032211|ref|YP_001667442.1| peptidase S14 ClpP [Pseudomonas putida GB-1]
gi|166858699|gb|ABY97106.1| peptidase S14 ClpP [Pseudomonas putida GB-1]
Length = 383
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 32/163 (19%), Positives = 74/163 (45%), Gaps = 7/163 (4%)
Query: 45 VFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
+++ G+I A L ++ + + + N+ GG + G+AI++ ++ +
Sbjct: 46 IYIYGEIGGWGITANQFLRDLKAID--DGVSPVHVAFNTSGGDLFEGVAIHNALRRLGER 103
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ AAS GS+ + + + + A +++H P G A ++ R A + +
Sbjct: 104 CTGRIDALAASAGSVAVCGAHRVVAAST--AILMIHNPYTWIEGDAEELRRVADVLDQAF 161
Query: 163 RRLNEIY-VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ Y K+ E+ + ++ + ++A EA D G+VD++
Sbjct: 162 EVIIAAYKAKSPEIDEAELRRLVNDESWLTAQEALDLGLVDEI 204
>gi|329954258|ref|ZP_08295352.1| endopeptidase Clp [Bacteroides clarus YIT 12056]
gi|328527964|gb|EGF54950.1| endopeptidase Clp [Bacteroides clarus YIT 12056]
Length = 438
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 5/151 (3%)
Query: 58 LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSL 117
I L +L+ +P +I ++ V G AIYD ++ IS +G+ ASM ++
Sbjct: 92 DIQYFLSWLDPADPTIDIEIHSCGGDTV--EGYAIYDALRASGKEISCTVVGRCASMATI 149
Query: 118 LLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH---AQDIVKIKRRLNEIYVKNCG 174
+L + R A P+A+ L+H+P D+E + K ++ +YV+ G
Sbjct: 150 ILLSAPLERRKAYPHAKFLIHKPYLAKYDDVLDLETIETLKSSLETEKAKMLAVYVERTG 209
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+E ++++ A G + VL
Sbjct: 210 TEPNVLETQMNKETWFGGEVAKQLGFISAVL 240
>gi|163311880|gb|ABY26953.1| Clp protease 2 proteolytic subunit [Capsicum annuum]
Length = 99
Score = 68.9 bits (167), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 6/74 (8%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYI 79
PMV E R + S+L + RI+ G ++D MA +I AQLL+L+A +P K+I +Y+
Sbjct: 32 PMVQE------RFQSVISQLFQYRIIRCGGAVDDDMANIIVAQLLYLDAVDPTKDIVMYV 85
Query: 80 NSPGGVVTAGMAIY 93
NSPGG VTAGMA++
Sbjct: 86 NSPGGSVTAGMAVF 99
>gi|153941045|ref|YP_001392481.1| putative Clp protease [Clostridium botulinum F str. Langeland]
gi|152936941|gb|ABS42439.1| putative Clp protease [Clostridium botulinum F str. Langeland]
gi|295320466|gb|ADG00844.1| putative Clp protease [Clostridium botulinum F str. 230613]
Length = 266
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 69/136 (50%), Gaps = 4/136 (2%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
FL+ + KE+ +YINS GG V AG+AIY ++ + G AAS+ S++ G+K
Sbjct: 62 FLKEIDNNKELDIYINSGGGSVFAGLAIYHQLKRHNGFKTVHVDGLAASITSVIALVGDK 121
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEK 182
A+ ++H+P G A++ + A D+ + + +IY N G E +++
Sbjct: 122 --VVIPAPAQFMIHKPWTIALGNANEFRKQANDLDIAEESILKIYEANLNEGVNIETIKQ 179
Query: 183 TLDRDHIMSASEACDW 198
+ + M+ +A ++
Sbjct: 180 LMADETWMTGEKAAEY 195
>gi|124009662|ref|ZP_01694334.1| Clp protease domain protein [Microscilla marina ATCC 23134]
gi|123984712|gb|EAY24697.1| Clp protease domain protein [Microscilla marina ATCC 23134]
Length = 429
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/178 (22%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 39 LLKERIVFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTA----GM 90
LL ++I +++ +L L + I++ INSPGG +T
Sbjct: 20 LLYDKI-----GVDEEGKGISGRRFAEELFRL--TKRFRRINVRINSPGGKITDGLSICA 72
Query: 91 AIYDTMQFIKP-PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
AI + Q I T+ G A S+ L+ G+K +L + GG +G +
Sbjct: 73 AILNINQSTPNVRIDTYVDGLALSIAGLIAVCGKKVGMCNFAKL-MLHNPFIGGKNGTQN 131
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ ++++K L + G+ E++ +++ +SA+EA G VD+V
Sbjct: 132 GGIEQHETLMQVKEMLLTLLATRTGQKVEDLSLMMNQTTWLSAAEAKRQGFVDEVFEH 189
>gi|298387203|ref|ZP_06996756.1| ATP-dependent Clp protease [Bacteroides sp. 1_1_14]
gi|298259872|gb|EFI02743.1| ATP-dependent Clp protease [Bacteroides sp. 1_1_14]
Length = 353
Score = 68.5 bits (166), Expect = 5e-10, Method: Composition-based stats.
Identities = 38/148 (25%), Positives = 69/148 (46%), Gaps = 9/148 (6%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ K++ +YINSPGG I + ++ I+ AS + + F+
Sbjct: 40 SGIKDVHIYINSPGGECFEANEIVNVIKKFPGKITGEGGALVASAATYIAINCT---SFS 96
Query: 130 LP-NARILLHQPSGGFSGQASDIERHAQDIVKIK-RRLNEIYVKNCGKTYEEVEKTLDR- 186
+P N ++HQ SGG G+ +DIE + + K+ LN K K +++ ++
Sbjct: 97 MPANGLFMIHQVSGGACGRVADIESTLEVMRKLNEHYLNAFLSKCTDK--KKIRDAWEKG 154
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEK 214
D+ MSA EA + G V +V + +++
Sbjct: 155 DYWMSAQEAKENGFVTEV-TGKAKVDKA 181
>gi|255565800|ref|XP_002523889.1| conserved hypothetical protein [Ricinus communis]
gi|223536819|gb|EEF38458.1| conserved hypothetical protein [Ricinus communis]
Length = 78
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 39/75 (52%)
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
+P ++ +G + Q + A++++K+ L IY + GK V + ++RD
Sbjct: 1 MPVRVMIHQPIAGFYEAQIGEFVLEAEELLKLHEILTRIYAQRMGKPLWVVSEDMERDVF 60
Query: 190 MSASEACDWGVVDKV 204
MSA+EA G+VD V
Sbjct: 61 MSAAEAQAHGIVDLV 75
>gi|229032762|ref|ZP_04188721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
gi|228728557|gb|EEL79574.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH1271]
Length = 39
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/36 (63%), Positives = 31/36 (86%)
Query: 16 LGLVPMVVEQTNRGERSYDIYSRLLKERIVFVTGQI 51
+ L+P V+EQTNRGER+YDIYSRLLK+RI+ + Q+
Sbjct: 1 MNLIPTVIEQTNRGERAYDIYSRLLKDRIIMLGRQL 36
>gi|75764057|ref|ZP_00743661.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|74488455|gb|EAO52067.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
Length = 244
Score = 68.5 bits (166), Expect = 6e-10, Method: Composition-based stats.
Identities = 37/146 (25%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + + +++Y+NS GG V AG+AIY+ ++ K + + G AAS+ S++ AG++
Sbjct: 56 LGQLDDKSNLNIYVNSGGGSVFAGLAIYNMLKRNKAQKTVYVDGVAASIASVIALAGDR- 114
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKT 183
NA +++H+P G A+ + + A+D+ ++ + +Y +N G E +++
Sbjct: 115 -VVVPSNAFLMVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEMEVIQQL 173
Query: 184 LDRDHIMSASEACDWGVVDKVLMSRI 209
+D + +S EA + + +V+ ++
Sbjct: 174 VDAETWLSGEEAEKYFNI-EVVEAKE 198
>gi|217961372|ref|YP_002339940.1| Clp protease [Bacillus cereus AH187]
gi|217065025|gb|ACJ79275.1| Clp protease [Bacillus cereus AH187]
Length = 230
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
++++YINS GG V AGMAIY+ ++ + + G S+ S++ AG+K NA
Sbjct: 51 DLNIYINSGGGSVFAGMAIYNMIKRHEGYKTVHIDGLGGSIASVIAFAGDK--LIVPSNA 108
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMS 191
+++H+P G G A+D + A D+ I+ + +Y N G EE+ + + + ++
Sbjct: 109 YLMIHKPWNGTYGNANDFRKMADDLDAIEEGIINVYKDNLKEGVDIEEIREMVQNETWLN 168
Query: 192 ASEACDW 198
+A ++
Sbjct: 169 GLKASEY 175
>gi|9632942|ref|NP_049970.1| Predicted clp-protease [Streptococcus phage Sfi21]
gi|5230830|gb|AAD41032.1|AF112470_7 clp-protease [Streptococcus phage Sfi21]
gi|5524037|gb|AAD44089.1|AF115103_5 orf221 gp [Streptococcus phage Sfi21]
Length = 224
Score = 68.1 bits (165), Expect = 7e-10, Method: Composition-based stats.
Identities = 36/138 (26%), Positives = 62/138 (44%), Gaps = 2/138 (1%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
A + +EI+L I S GG V A IY ++ I G AAS S++ A +
Sbjct: 40 ANDEGEEITLNIASNGGDVFAASEIYTMLKSCGKRIVANVQGLAASAASVISMAADTVRI 99
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
P A +++H+ S G G + D+E + + I + Y G E+ + ++
Sbjct: 100 --SPTAHMMIHKASSGLVGNSDDMEHQSVVLNSIDESIALAYEMKTGLKQTELLDLMAKE 157
Query: 188 HIMSASEACDWGVVDKVL 205
++A A D G D+++
Sbjct: 158 TWLNAKTAVDKGFADEIM 175
>gi|124005680|ref|ZP_01690519.1| fels-1 prophage protease subunits of ATP-dependent proteases
[Microscilla marina ATCC 23134]
gi|123988748|gb|EAY28354.1| fels-1 prophage protease subunits of ATP-dependent proteases
[Microscilla marina ATCC 23134]
Length = 399
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 17/178 (9%)
Query: 39 LLKERIVFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
LL ++I I+D +L L + +++ INSPGG +T G++I
Sbjct: 20 LLYDKI-----GIDDEGKGISGQRFAKELYSLA--RRYRRLNVRINSPGGKITDGLSICA 72
Query: 95 TMQFIKP-----PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+ I I T+ G A S+ L+ G+K +L + GG +
Sbjct: 73 AILNINQTTPGVRIDTYVDGLALSIAGLIAVCGKKVGMCNFAKL-MLHNPFIGGKNSTDP 131
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + ++++K L + G+ + + +++ +SA+EA G VD+V
Sbjct: 132 NEAGQHETLMQVKEMLLTLLATRTGQKVDTLSAMMNQTTWLSAAEAKRQGFVDEVFEH 189
>gi|253570517|ref|ZP_04847925.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
gi|251839466|gb|EES67549.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
Length = 353
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLL 119
QL+ + K++ +YINSPGG I + ++ I+ AS + +
Sbjct: 34 IEQLIR----SGIKDVHIYINSPGGECFEANEIVNVIKKFPGKITGEGGALVASAATYIA 89
Query: 120 SAGEKGMRFALP-NARILLHQPSGGFSGQASDIERHAQDIVKIK-RRLNEIYVKNCGKTY 177
F++P N ++HQ SGG G+ +DIE + + K+ LN K K
Sbjct: 90 INCT---SFSMPANGLFMIHQVSGGACGRVADIESALEVMRKLNEHYLNAFLSKCTDK-- 144
Query: 178 EEVEKTLDR-DHIMSASEACDWGVVDKVLMSRIDIEEK 214
+++ ++ D+ MSA EA + G V +V + +++
Sbjct: 145 KKIRDAWEKGDYWMSAQEAKENGFVTEV-TGKAKVDKA 181
>gi|228966919|ref|ZP_04127959.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792772|gb|EEM40334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 184
Score = 67.7 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++ +NSPGG V G+AIY+ ++ I G AAS S++ A ++ +
Sbjct: 9 ININLNSPGGDVFDGIAIYNQLKNHPAKIIINVDGLAASAASIIAMAADE--LIMNTGSM 66
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ S G DI + + I + L +IY+ E+E + + +A+E
Sbjct: 67 LMIHEASTWTWGTKLDIRKTLNALEGIDKSLADIYMTRYQGERSEIETMIANETWFTANE 126
Query: 195 ACDWGVVDKV 204
A ++G+ KV
Sbjct: 127 AVEFGLAHKV 136
>gi|313898167|ref|ZP_07831706.1| endopeptidase Clp [Clostridium sp. HGF2]
gi|312957195|gb|EFR38824.1| endopeptidase Clp [Clostridium sp. HGF2]
Length = 178
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 2/121 (1%)
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
IY+ M ++ G AAS S++ AG K P + +++H P G S++
Sbjct: 6 IYNMMMEYPGNVTVKIDGIAASAASVIAMAGTK--VLVSPVSMLMIHNPMTAAMGDTSEM 63
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
++ + ++K + Y G + ++ +D + M A A D G D +L +
Sbjct: 64 QKAIAMLAEVKESIINAYEIKTGMSRAKLSHLMDAETWMDAHTAIDMGFADGILAKPAET 123
Query: 212 E 212
Sbjct: 124 P 124
>gi|124004284|ref|ZP_01689130.1| Clp protease domain protein [Microscilla marina ATCC 23134]
gi|123990354|gb|EAY29853.1| Clp protease domain protein [Microscilla marina ATCC 23134]
Length = 425
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKP-----PISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ INSPGG +T G+++ + I I T+ G A S+ L+ G+K
Sbjct: 54 NVRINSPGGKITDGLSVCAAILNINQTTPNVRIDTYVDGLALSIAGLIAVCGKKVGMCNF 113
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+L + GG + + + ++++K L + G+ E + +++ +
Sbjct: 114 AKL-MLHNPFIGGKNSTDPNEAGQHETLMQVKEMLLTLLATRTGQKIETLSAMMNQTTWL 172
Query: 191 SASEACDWGVVDKVLMS 207
SA+EA G VD+V
Sbjct: 173 SAAEAKRQGFVDEVFEH 189
>gi|237738073|ref|ZP_04568554.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Fusobacterium mortiferum ATCC 9817]
gi|229419953|gb|EEO35000.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Fusobacterium mortiferum ATCC 9817]
Length = 257
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/148 (22%), Positives = 72/148 (48%), Gaps = 7/148 (4%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAA 112
D + +LL K+++++INS GG V AG+AIY ++ + + G AA
Sbjct: 51 DEVTPTEIKELL---DTVKNKDLNIFINSSGGNVFAGLAIYHMLKRHEGKKKVYVDGVAA 107
Query: 113 SMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN 172
S+ S++ AG++ NA +++H+ +G +D+ + K+ + +IY
Sbjct: 108 SIASIIAMAGDE--IHIPKNAYLMIHRSWICTAGNKNDLLETISMLEKMDINMADIYKTK 165
Query: 173 --CGKTYEEVEKTLDRDHIMSASEACDW 198
+ E++ + +D + ++ EA ++
Sbjct: 166 ALTDISNEKILELMDNETWLTGIEAQNY 193
>gi|325281222|ref|YP_004253764.1| peptidase S14 ClpP [Odoribacter splanchnicus DSM 20712]
gi|324313031|gb|ADY33584.1| peptidase S14 ClpP [Odoribacter splanchnicus DSM 20712]
Length = 357
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/152 (19%), Positives = 53/152 (34%), Gaps = 11/152 (7%)
Query: 65 FLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK 124
+L A I ++ S GG + I D ++ G AAS +L+ +
Sbjct: 25 YLNAAGKNPVIC-HVCSGGGDFLMAINIKDQFAAH-GSVTVDISGYAASAATLIGLGAKH 82
Query: 125 GMRFALPNARILLHQPSGGFS-----GQASDIERHAQDIVKIKRRL----NEIYVKNCGK 175
I Q SD+ H + + ++ + Y GK
Sbjct: 83 TRISNSSFYLIHKVMSWVNAWGGMNEDQISDLITHLEKVKDENEKMTLVAAKAYADRSGK 142
Query: 176 TYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
E+ + + ++A EA +WG VD+V +
Sbjct: 143 PVLEILNLMKEEKWLTADEAKEWGFVDEVYNT 174
>gi|314055266|ref|YP_004063604.1| putative ATP-dependent protease proteolytic subunit [Ostreococcus
tauri virus 2]
gi|313575157|emb|CBI70170.1| putative ATP-dependent protease proteolytic subunit [Ostreococcus
tauri virus 2]
Length = 210
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE---------NPQKEISLYINSPGGVVTAGMAIYDT 95
+ G+I LE + EI ++I S GG + +G + +
Sbjct: 43 IHFYGEITPENTLEFVESFRKLEIHLLKQKADLIGYEPEIRIHIMSEGGDMFSGFTLKNV 102
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + + T G S + + G + R NA +L+HQ S F G+ D++
Sbjct: 103 LEKSRVKVVTIAQGACCSAATFMFLGGSE--RRMGENAYLLIHQLSTDFWGKYQDLKNEM 160
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K L +Y+ ++ +K + +D +SAS+ + + +
Sbjct: 161 KSCDKFMASLKNMYMTKTEIPEKKFKKLMKKDLFLSASKCLKYKIAHAI 209
>gi|304383262|ref|ZP_07365731.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
gi|304335616|gb|EFM01877.1| conserved hypothetical protein [Prevotella marshii DSM 16973]
Length = 369
Score = 67.3 bits (163), Expect = 1e-09, Method: Composition-based stats.
Identities = 48/180 (26%), Positives = 87/180 (48%), Gaps = 17/180 (9%)
Query: 45 VFVTGQIEDHM---ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ + G I + + + +L+ L A +I + INS GG V +GMAI++ ++ K
Sbjct: 18 ILLYGDIGEGQQVDSKAVVEELITLAA--RYPKIDVRINSCGGDVFSGMAIFNALKTSKA 75
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I+ + G AAS+ +++ G+ + P A+++LH G G A +E+ Q I ++
Sbjct: 76 DITVYIDGVAASIAAIVALCGKP--LYMAPYAKLMLHSVKAGGYGDAKQLEQTIQLINQL 133
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDR-----DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
L+ + T EEVE+ R DH ++A EA +++ + + D E K
Sbjct: 134 HGDLSNMVSARLNITPEEVEQ---RFFDGTDHWLTAQEALQMKLINGIYET--DTAEAPK 188
>gi|290343654|ref|YP_003495021.1| hypothetical protein OTV1_182 [Ostreococcus tauri virus 1]
gi|260161069|emb|CAY39770.1| hypothetical protein OTV1_182 [Ostreococcus tauri virus 1]
Length = 204
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/169 (19%), Positives = 68/169 (40%), Gaps = 11/169 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEA---------ENPQKEISLYINSPGGVVTAGMAIYDT 95
+ G+I LE + EI ++I S GG + +G + +
Sbjct: 37 IHFYGEITPENTLEFVENFRKLETSLLKQKADLIGYEPEIRIHIMSEGGDMFSGFTLKNV 96
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + + T G S + + G + R NA +L+HQ S F G+ D++
Sbjct: 97 IEKSRVKVITIAQGACCSAATFMFLGGSE--RRMGENAYLLIHQLSTDFWGKYQDLKNEM 154
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ K L ++Y+ ++ +K + +D +SAS+ + + +
Sbjct: 155 KSCDKFMASLKKMYMTKTEIPEKKFKKLMKKDLFLSASKCLKYKIAHAI 203
>gi|228943756|ref|ZP_04106155.1| Clp protease [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|228976688|ref|ZP_04137118.1| Clp protease [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228982345|ref|ZP_04142620.1| Clp protease [Bacillus thuringiensis Bt407]
gi|228777391|gb|EEM25683.1| Clp protease [Bacillus thuringiensis Bt407]
gi|228783035|gb|EEM31184.1| Clp protease [Bacillus thuringiensis serovar thuringiensis str.
T01001]
gi|228815908|gb|EEM62134.1| Clp protease [Bacillus thuringiensis serovar berliner ATCC 10792]
gi|326940367|gb|AEA16263.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
Length = 210
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 64/137 (46%), Gaps = 4/137 (2%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+I ++INS GG G+AI + ++ ++ G AAS SL+ K +P
Sbjct: 26 TNDIEIHINSNGGDAFEGIAICNYLKNHPSNVTAVIDGIAASAASLIAMGANK---IEMP 82
Query: 132 -NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
N +++H+ S G A +E+ A+ + + L + Y + ++E LD + M
Sbjct: 83 SNTTMMVHRASTYAFGNADSLEKQAKMLRDVDEALIQSYNSRFNGEFFQLETLLDNETYM 142
Query: 191 SASEACDWGVVDKVLMS 207
+A +A +G D + S
Sbjct: 143 TAEKAKSFGFCDVITDS 159
>gi|229061550|ref|ZP_04198894.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228717784|gb|EEL69434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
Length = 184
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 2/130 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++ +NSPGG V G+AIY+ ++ I G AAS S++ A ++ +
Sbjct: 9 ININLNSPGGDVFDGIAIYNQLKNHPAKIIINVDGLAASAASIIAMAADE--LIMNTGSM 66
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ S G DI + + I + L +IY+ E+E + + +A+E
Sbjct: 67 LMIHEASTWTWGTKLDIRKTLNALEGIDKSLADIYMTRYQGERTEIETMIANETWFTANE 126
Query: 195 ACDWGVVDKV 204
A ++G+ KV
Sbjct: 127 AVEFGLAHKV 136
>gi|124009870|ref|ZP_01694537.1| Clp protease domain protein [Microscilla marina ATCC 23134]
gi|123984106|gb|EAY24472.1| Clp protease domain protein [Microscilla marina ATCC 23134]
Length = 425
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 6/137 (4%)
Query: 76 SLYINSPGGVVTAGMAIYDTMQFIKP-----PISTFCMGQAASMGSLLLSAGEKGMRFAL 130
++ INSPGG +T G++I + I I T+ G A S+ L+ G+K
Sbjct: 54 NVRINSPGGKITDGLSICAAILNINQSTPGVRIDTYVDGLALSIAGLIAVCGKKVGMCNF 113
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
+L + GG + + + ++++K L + G+ + + +++ +
Sbjct: 114 AKL-MLHNPFIGGKNSTNPNEAGQHETLMQVKEMLLTLLATRTGQKVDTLSAMMNQTTWL 172
Query: 191 SASEACDWGVVDKVLMS 207
SA+EA G VD+V
Sbjct: 173 SAAEAKRQGFVDEVFEH 189
>gi|228962824|ref|ZP_04124079.1| Clp protease [Bacillus thuringiensis serovar pakistani str. T13001]
gi|228796861|gb|EEM44216.1| Clp protease [Bacillus thuringiensis serovar pakistani str. T13001]
Length = 210
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 72 QKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALP 131
+I ++INS GG G+AI + ++ ++ G AAS SL+ K +P
Sbjct: 26 TNDIEIHINSNGGDAFEGIAICNYLKNHPSNVTAVIDGIAASAASLIAMGANK---IEMP 82
Query: 132 -NARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
N +++H+ S G A +E+ A + + L + Y + ++E LD + M
Sbjct: 83 SNTTMMVHRASTYAFGNADSLEKQANMLRGVDEALIQSYNSRFNGEFFQLETLLDNETYM 142
Query: 191 SASEACDWGVVDKVLMS 207
+A +A +G D + S
Sbjct: 143 TAEKAKSFGFCDVITDS 159
>gi|281491948|ref|YP_003353928.1| phage ATP-dependent endopeptidase ClpP [Lactococcus lactis subsp.
lactis KF147]
gi|281375657|gb|ADA65161.1| Phage protein, ATP-dependent endopeptidase ClpP, proteolytic
subunit clpP [Lactococcus lactis subsp. lactis KF147]
Length = 237
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 3/140 (2%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
L + ++ I L I+S GG V + IY ++ I G AAS S++ AG+
Sbjct: 39 LNSAEDEEVI-LNISSNGGDVFSASEIYTKLKNSNKNIVVNIEGIAASAASVIAMAGDTV 97
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
P A++++H+ S G G A D E A+ + + + + Y G ++ + +
Sbjct: 98 NI--SPTAQLMIHKASSGGQGNADDFEHEAKVLNGVDQSITAAYELKTGMKQSDLLQLMS 155
Query: 186 RDHIMSASEACDWGVVDKVL 205
+ M+A +A D G D ++
Sbjct: 156 NETWMTAQDAVDKGFADNIM 175
>gi|77413458|ref|ZP_00789649.1| ClpP protease family protein [Streptococcus agalactiae 515]
gi|77160473|gb|EAO71593.1| ClpP protease family protein [Streptococcus agalactiae 515]
Length = 243
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+I + INS GG V AG IY ++ + ++ +G AAS S++ AG+ +
Sbjct: 37 DNSDIEVLINSGGGDVYAGSEIYTALKSYQGNVTVKIVGIAASAASVIAMAGD--VVEIS 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H S SG + A + + YV E+ + +
Sbjct: 95 PTAQLMIHNVSTTVSGDHKQMLHEAGVLENYNISIANAYVNKTDLEMNELLDLMSTETWF 154
Query: 191 SASEACDWGVVDK 203
+A +A + G DK
Sbjct: 155 NAQQAVEKGFADK 167
>gi|237795138|ref|YP_002862690.1| serine protease [Clostridium botulinum Ba4 str. 657]
gi|229260557|gb|ACQ51590.1| serine protease [Clostridium botulinum Ba4 str. 657]
Length = 253
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 64/150 (42%), Gaps = 5/150 (3%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+D A L+ N + +Y+NS GG V AG+AIY+ ++ + G A
Sbjct: 50 DDDTCPQDIADF--LKELNSFDNLDIYVNSGGGSVFAGIAIYNQLKRHNGFKTVHVDGIA 107
Query: 112 ASMGSLLLSAGEKGMRFALPNARILL-HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV 170
AS+ S++ AG+K + I S A ++ + A + + + IY+
Sbjct: 108 ASITSVISCAGDKVIIHKSAQFMIHKPTASYFWTSLNADELRKEADTLDICQDSIRNIYM 167
Query: 171 KNC--GKTYEEVEKTLDRDHIMSASEACDW 198
+N G T EE+ ++ + + D+
Sbjct: 168 ENVKEGITEEEINNLINAETWFTGETVTDY 197
>gi|320587789|gb|EFX00264.1| ATP-dependent clp protease proteolytic subunit [Grosmannia
clavigera kw1407]
Length = 148
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/191 (18%), Positives = 65/191 (34%), Gaps = 82/191 (42%)
Query: 19 VPMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLY 78
+P + E T ERI+ + G ++D ++ I AQLL+LE++ P+K I++Y
Sbjct: 40 MPYITEVT---------------ERIICLNGPVDDTVSAAIVAQLLWLESDAPEKPITMY 84
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
INSPG G R I+
Sbjct: 85 INSPG-----------------------------------------GERIRGQVNEIVRS 103
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
+ F + D++ + + ++A E+ +
Sbjct: 104 HLNKAFGHEKYDLQSINDMMERDN--------------------------YLTAEESKEH 137
Query: 199 GVVDKVLMSRI 209
G+VD++L+ R
Sbjct: 138 GIVDEILVKRP 148
>gi|251781097|ref|ZP_04824017.1| serine protease [Clostridium botulinum E1 str. 'BoNT E Beluga']
gi|243085412|gb|EES51302.1| serine protease [Clostridium botulinum E1 str. 'BoNT E Beluga']
Length = 253
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/152 (25%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+D A L+ N + +Y+NS GG V AG+AIY ++ + + G A
Sbjct: 50 DDDTCPQDIADF--LKELNSFDSLDIYVNSGGGSVFAGIAIYHQLKRHNGFKTVYVDGIA 107
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQP---SGGFSGQASDIERHAQDIVKIKRRLNEI 168
AS+ S++ AG+K +A+ ++H+P S A ++ + A + + + I
Sbjct: 108 ASIASVISCAGDK--VIIPKSAQFMIHKPTASYFWTSLNADELRKEADTLDVCQDSIRNI 165
Query: 169 YVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
Y++N G T EE+ +D + + D+
Sbjct: 166 YMENVKEGITEEEINNLIDSETWFTGETVTDY 197
>gi|313844152|ref|YP_004061815.1| hypothetical protein OlV1_183c [Ostreococcus lucimarinus virus
OlV1]
gi|312599537|gb|ADQ91559.1| hypothetical protein OlV1_183c [Ostreococcus lucimarinus virus
OlV1]
Length = 209
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 32/169 (18%), Positives = 69/169 (40%), Gaps = 11/169 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE---------NPQKEISLYINSPGGVVTAGMAIYDT 95
+ G+I LE + EI ++I S GG + +G + +
Sbjct: 42 IHFYGEITPENTLEFVESFRKLETHLLKQKADLIGYEPEIRIHIMSEGGDMFSGFTLKNV 101
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + + T G S + + G + R NA IL+HQ S F G+ +++
Sbjct: 102 IEKSRVKVVTIAQGACCSAATFMFLGGSE--RRMGENAYILIHQLSTDFWGKYHELKTEM 159
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + + L ++Y+ ++ +K + +D +SAS+ + + +
Sbjct: 160 KSCDEFMKSLKKMYMTKTEIPEKKFKKLMKKDLFLSASKCLKYKIAHAI 208
>gi|14251131|ref|NP_116498.1| putative ATP-dependent ClpP protein [Lactococcus phage BK5-T]
gi|14209623|gb|AAK56806.1|AF176025_6 putative ATP-dependent ClpP protein [Lactococcus phage BK5-T]
gi|26005527|emb|CAC80147.1| hypothetical protein [Lactococcus phage BK5-T]
Length = 237
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 2/135 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+E+ L I S GG V + IY ++ I G AAS S++ AG+
Sbjct: 43 EDEEVILNIASNGGDVFSASEIYTKLKNSNKNIVVNIEGIAASAASVIAMAGDTVNI--S 100
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H+ G G A D E+ A+ + + + + Y G ++ + + + M
Sbjct: 101 PTAQLMIHKAMSGSQGNADDFEQEAKVLNGVDQSIAAAYELKTGMKQSDLLQLMSNETWM 160
Query: 191 SASEACDWGVVDKVL 205
+A +A D G D ++
Sbjct: 161 TAQDAVDKGFADNIM 175
>gi|153873549|ref|ZP_02002095.1| secreted protein [Beggiatoa sp. PS]
gi|152069984|gb|EDN67904.1| secreted protein [Beggiatoa sp. PS]
Length = 476
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/171 (22%), Positives = 72/171 (42%), Gaps = 8/171 (4%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYIN-SPGGVVTAGMAIYDTMQFIK 100
+R + + G I A I ++ + ++ + I L I+ PGG V G I M+ +
Sbjct: 250 DRKIVLDGIIWPGTANNIVERIQYYNNKSTEYPIFLVIDYCPGGSVMEGTRIVKAMKKSR 309
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ AASM +++ + + +ALP+A I+ HQ G G ++ + I +
Sbjct: 310 APVYVVVKALAASMAAVITTLAD--HSYALPDAIIVHHQVWGMSFGNRTEQREQLKIIDE 367
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTL-----DRDHIMSASEACDWGVVDKVLM 206
R+ + T ++ K + D I A+ A + V ++
Sbjct: 368 WSERIMGPVAEKMDMTLNDLVKKMYQHNSAGDWIEFANAAVKYKWVGNIVE 418
>gi|319745831|gb|EFV98124.1| S14 family endopeptidase ClpP [Streptococcus agalactiae ATCC 13813]
Length = 243
Score = 66.6 bits (161), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 2/133 (1%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+I + INS GG V AG IY ++ + ++ +G AAS S++ AG+ +
Sbjct: 37 DNSDIEVLINSGGGDVYAGSEIYTALKSYQGNVTVKIVGIAASAASVIAMAGD--VVEIS 94
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM 190
P A++++H S SG + A + + YV E+ + +
Sbjct: 95 PTAQLMIHNVSTTVSGDHKQMLHEAGVLENYNISIANAYVNKTDLEMNELLDLMSTETWF 154
Query: 191 SASEACDWGVVDK 203
+A +A + G DK
Sbjct: 155 NAQQAIEKGFADK 167
>gi|124002916|ref|ZP_01687767.1| Clp protease domain protein [Microscilla marina ATCC 23134]
gi|123991566|gb|EAY30974.1| Clp protease domain protein [Microscilla marina ATCC 23134]
Length = 425
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/181 (21%), Positives = 72/181 (39%), Gaps = 17/181 (9%)
Query: 39 LLKERIVFVTGQIEDH----MATLICAQLLFLEAENPQKEISLYINSPGGVVTA----GM 90
LL ++I I+D +L L + +++ INSPGG +T
Sbjct: 20 LLYDKI-----GIDDEGKGISGQRFAKELYSLA--RRYRRLNVRINSPGGKITDGLSICA 72
Query: 91 AIYDTMQFIKP-PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
AI + Q I T+ G A S+ L+ G+K +L + G +
Sbjct: 73 AILNINQSTPNVRIDTYVDGLALSIAGLIAVCGKKVGMCNFAKL-MLHNPFIGSKNSTDP 131
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ + ++++K L + G+ E++ +++ +SA+EA G VD+V
Sbjct: 132 NEAGQHETLMQVKEMLLTLLATRTGQKVEDLSFMMNQTTWLSAAEAKRQGFVDEVFEHPK 191
Query: 210 D 210
Sbjct: 192 K 192
>gi|283481346|emb|CAZ69462.1| putative ATP-dependent protease proteolytic subunit [Emiliania
huxleyi virus 99B1]
Length = 238
Score = 65.8 bits (159), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/129 (26%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+S GG + AG + + ++ P+ T G AS + +L AG R+ +P++ +L
Sbjct: 107 LYIHSCGGDLFAGFSAFSLIRRNVIPVVTIADGYVASAATFMLLAGS--YRYIVPSSHVL 164
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ S G G+ +IE ++ +I R++ +Y + ++K L + ++ +
Sbjct: 165 IHQLSTGGYGKFQEIEDDYKNCKRIMERMHALYKEETWLPPAILKKLLKSELDLTDDKCV 224
Query: 197 DWGVVDKVL 205
+G+V+++L
Sbjct: 225 KYGIVNELL 233
>gi|320161811|ref|YP_004175036.1| peptidase S14, ClpP family protein [Anaerolinea thermophila UNI-1]
gi|319995665|dbj|BAJ64436.1| peptidase S14, ClpP family protein [Anaerolinea thermophila UNI-1]
Length = 196
Score = 65.4 bits (158), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 75/170 (44%), Gaps = 8/170 (4%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+ER V + L+ LL + + + L +++PGG V+ G+ +Y ++ +
Sbjct: 3 RERWVQFFAPVNGESFGLLV-NLLQNAVLDGTERVHLLLSTPGGTVSYGLTLYALLRGLP 61
Query: 101 PPISTFCMGQAASMGSLLLSAGEK----GMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+ T+ +GQ S+G ++ AG++ L + + + Q +I +
Sbjct: 62 IEVWTYNVGQVDSIGVVVYCAGKRRLAAPQTRFLLHGIRTPLERGVYTTEQLREIVGEME 121
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + ++ G+ E+VE+ L + +A ++ +VD+++
Sbjct: 122 TDQR---NICRVLAESTGQALEKVERDLFHALTLLPEQAREYRLVDEIVT 168
>gi|73658420|emb|CAI99002.1| ATP-dependent protease, catalytic subunit [Arabidopsis thaliana]
gi|73658422|emb|CAI99003.1| ATP-dependent protease, catalytic subunit [Arabidopsis thaliana]
Length = 63
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ A++++K++ + +YV+ GK + + ++RD MSA+EA G+VD V
Sbjct: 7 EFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMSATEAQAHGIVDLV 61
>gi|73852602|ref|YP_293886.1| putative ATP-dependent protease proteolytic subunit [Emiliania
huxleyi virus 86]
gi|72415318|emb|CAI65555.1| putative ATP-dependent protease proteolytic subunit [Emiliania
huxleyi virus 86]
Length = 238
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 69/129 (53%), Gaps = 2/129 (1%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
LYI+S GG + AG + + ++ P+ T G AS + LL AG R+ +P++ +L
Sbjct: 107 LYIHSCGGDLFAGFSAFSLIRRNVIPVVTIADGYVASAATFLLLAGS--YRYIVPSSHVL 164
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEAC 196
+HQ S G G+ +IE ++ +I R++ +Y + ++K L + ++ +
Sbjct: 165 IHQLSTGGYGKFQEIEDDYKNCKRIMERMHALYKEETWLPSAILKKLLKSELDLTDDKCV 224
Query: 197 DWGVVDKVL 205
+G+V+++L
Sbjct: 225 KYGIVNELL 233
>gi|145295969|ref|YP_001138790.1| hypothetical protein cgR_1893 [Corynebacterium glutamicum R]
gi|57158127|dbj|BAD84096.1| ClpP protease family protein [Corynebacterium glutamicum]
gi|140845889|dbj|BAF54888.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 459
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
++ + +++ INS GG V G I + ++ G AAS S++ AG +
Sbjct: 20 DSLPDEGPVTVRINSFGGAVDVGHTIRHLLADHPGHVTCVVDGVAASAASIIAIAGSDEL 79
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
+ +++HQ S G G +S + A+ + K+ L +Y G E +
Sbjct: 80 VMR-EGSELMIHQASLGMDGNSSSLRSMAERLEKMDAELANVYASKAGGDAEHWLGLMAA 138
Query: 187 DHIMSASEACDWGVVDKV 204
+ SA++A D G+ D+V
Sbjct: 139 ETWFSAADAVDAGLADRV 156
>gi|254304018|ref|ZP_04971376.1| endopeptidase Clp [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
gi|148324210|gb|EDK89460.1| endopeptidase Clp [Fusobacterium nucleatum subsp. polymorphum ATCC
10953]
Length = 236
Score = 65.0 bits (157), Expect = 6e-09, Method: Composition-based stats.
Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 15/167 (8%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQK-----------EISLYINSPGGVVTAGMAIY 93
+++ G I + LE N E+ ++INS GG V AG+AI
Sbjct: 17 IYINGDIVSDSDNDGFYEFFDLENPNVYPLDVANALKEAGEVHVHINSYGGDVFAGVAIS 76
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
+ ++ K + G +AS S++ ++ NA +++H+ S G G A D +
Sbjct: 77 NMLKNHKGKTIAYVDGLSASSASIIAFGCKE--IVIPDNAYLMIHRVSCGMFGNADDFLK 134
Query: 154 HAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
+ + KI+ + Y++ G T E++ + + + + ++
Sbjct: 135 QIEVMEKIEDGIINTYMEKAIEGVTREQIYDLMKSETWFTGKDCLNY 181
>gi|210621038|ref|ZP_03292423.1| hypothetical protein CLOHIR_00366 [Clostridium hiranonis DSM 13275]
gi|210155022|gb|EEA86028.1| hypothetical protein CLOHIR_00366 [Clostridium hiranonis DSM 13275]
Length = 244
Score = 65.0 bits (157), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
K++ ++INS GG V AG+ IY+ ++ K + + G AAS+ S++ AG++ +
Sbjct: 56 CEDKDLEIHINSGGGSVFAGITIYNMLKNFKGHKTVYVDGLAASIASVIALAGDEVVMRT 115
Query: 130 LPNARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDR 186
+ I A +++ ++ + K++ + +IY +N EE+E ++
Sbjct: 116 GSSMMIHKPSVYIYNQSLNADELKGMSETLDKLQECIMQIYRENLKDKSKLEEIETMVNA 175
Query: 187 DHIMSASEACDW 198
+ M++ EA D+
Sbjct: 176 ETWMTSEEAMDY 187
>gi|193875744|gb|ACF24508.1| chloroplast ATP-dependent Clp protease proteolytic subunit 6
[Gymnochlora stellata]
Length = 207
Score = 64.7 bits (156), Expect = 9e-09, Method: Composition-based stats.
Identities = 31/178 (17%), Positives = 74/178 (41%), Gaps = 8/178 (4%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVV----TAGM 90
I S+L + ++++ I +++ LI + + + + + +S+++NSP + +
Sbjct: 31 ITSQLFENDLIYICLPINSNVSRLIMSPVFWYKH-SKVPLLSIFLNSPEYLNKEILFNEI 89
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
+ + + + +T +G SLLL+AG R+ L N++ +LH +
Sbjct: 90 YLINFILTLNIQFTTTNLGLCYGDLSLLLAAGNINDRYMLKNSKCILHNIHNKHTIYEMY 149
Query: 151 IERHAQDIVKI---KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ + ++ Y + Y + R A E +G++DK++
Sbjct: 150 HTFFKKYWKEYIINHHKIMLYYQQFTSLGYNNINNITARKLYFKAIECKQYGIIDKII 207
>gi|237836623|ref|XP_002367609.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii ME49]
gi|211965273|gb|EEB00469.1| ATP-dependent Clp protease proteolytic subunit, putative
[Toxoplasma gondii ME49]
Length = 131
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 74/115 (64%)
Query: 91 AIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD 150
A++D + ++ P+ T +G AAS SLLL+AG G RFA+ + +LLHQP+G +G+ S+
Sbjct: 7 ALFDALSTLQAPVYTVNLGLAASAASLLLAAGSGGRRFAVEQSSVLLHQPAGSLAGRDSE 66
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++ +++ K+ ++ +Y + G+ V + + + +++A +AC++G+VD VL
Sbjct: 67 LQDERREVEKLHEKVVRLYSEVTGRPEARVRRDIKEEKVLTAEQACEYGLVDAVL 121
>gi|299142816|ref|ZP_07035944.1| ClpP protease [Prevotella oris C735]
gi|298575684|gb|EFI47562.1| ClpP protease [Prevotella oris C735]
Length = 365
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 15/159 (9%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E ++ + +I++ +SPGG V AG+ IY ++ ++ +G AS + L +
Sbjct: 35 EHQDEEVDIAV--SSPGGYVDAGLEIYQMIKDH-GKVNIHILGMTASAATFLTMGAKSVD 91
Query: 127 RFALPNARILLHQPSGGFSGQASD---------IERHAQDIVKIKRRLNEIYVKNCGKTY 177
I + A+ ++ D+ I + + +Y K GK+
Sbjct: 92 MVDGSLMLIHNASTAVREWQSANKEQLDALIAKYQKERDDLNTIDKVIASLYAKKNGKSV 151
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+E + + +S S+A ++G++DK+ R D + K
Sbjct: 152 DECMDKMQKAAWLSPSDALEFGLIDKI---REDDDAARK 187
>gi|193875742|gb|ACF24507.1| chloroplast ATP-dependent Clp protease proteolytic subunit 5
[Gymnochlora stellata]
Length = 183
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+ I+F+ I++H++ +I +++ +L ++ ++ INS GG + + + + + +
Sbjct: 20 DNIIFIKSYIDNHISKIILSKVFYLVNQDITNNMNFLINSSGGDIKEILILLEYLDSLSL 79
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
++ +G+ + +L A R PNA + + + ++ D+ ++
Sbjct: 80 MYTSVGLGKIIGGSAFIL-ATANNNRILYPNAILGMQIMKDNSVNNEETLVNYSNDLARL 138
Query: 162 KRRLNEIYVKNCGKT-YEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
L YV+ K + ++ + R+ + EA G++D+V+
Sbjct: 139 -SLLFSRYVRITKKAQFTKIIEKHQRNVYFTPKEALQLGIIDRVIK 183
>gi|1168975|sp|P42379|CLPP_CHLMO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp; Contains: RecName:
Full=Ceu clpP intein; AltName: Full=Insertion IS2
gi|575471|gb|AAA84150.1| clpP subunit of Clp protease [Chlamydomonas moewusii]
Length = 1010
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 7/91 (7%)
Query: 124 KGMRFALPNARILLHQPSGGFSG-------QASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
PN + + QASDI +Q+I+KI+ + EIY +
Sbjct: 879 PVYCLTGPNNVFYVQRNGKAVWTGNSSIQGQASDIWIDSQEIMKIRLDVAEIYSLATYRP 938
Query: 177 YEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
++ + LDRD ++A+E +G+ D++ +
Sbjct: 939 RHKILRDLDRDFYLTATETIHYGLADEIASN 969
Score = 43.1 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 16 LGL-VPMVV----EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ E+ + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIYCWGEELP--AQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQKE 74
KE
Sbjct: 59 RSKE 62
>gi|242373431|ref|ZP_04819005.1| S14 family endopeptidase ClpP [Staphylococcus epidermidis
M23864:W1]
gi|242348794|gb|EES40396.1| S14 family endopeptidase ClpP [Staphylococcus epidermidis
M23864:W1]
Length = 249
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 31/157 (19%), Positives = 70/157 (44%), Gaps = 9/157 (5%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
F+ + + L + +++ + INS GG V +G IY T++ ++
Sbjct: 21 FLGM--DATSPNDVIDAL-----PSDNEDLEVIINSGGGDVYSGSEIYTTLKAYPGKVNV 73
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
+G AAS S++ AG+ P A++++H G ++ + + ++ + R +
Sbjct: 74 KVVGVAASAASVIAMAGD--HVEMSPTAQMMIHNAWTVAIGDSNGMSKASEMLSGTNRGI 131
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVD 202
Y+ G + E + ++ + ++A +A + G D
Sbjct: 132 ANAYIAKTGLSEETILNLMNEETWLNAQDAVEKGFAD 168
>gi|242345576|ref|YP_002995462.1| hypothetical protein M102_gp05 [Streptococcus phage M102]
gi|154238317|emb|CAO77355.1| hypothetical protein [Streptococcus phage M102]
Length = 298
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 7/158 (4%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G + +A I + + N + +I+L +NS GG AG IY ++ + +
Sbjct: 21 LGGITDYTIAEDIISDIR-----NSEDDITLILNSGGGSYFAGAEIYSELKASNQKSTAY 75
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
A S ++L K R +A+++ HQ + G G++ D++ +Q + I +
Sbjct: 76 IASLAGSASAILAMGATK--RVISESAQLMFHQSAIGAFGKSQDLKEVSQMLDSIDAGIA 133
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
E+ N T +E + + D+ + A A D +VD++
Sbjct: 134 EVLTANSSLTKDEAKDFISTDNFVDAQRALDLKLVDEI 171
>gi|313891822|ref|ZP_07825427.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP-like
protein [Dialister microaerophilus UPII 345-E]
gi|313119816|gb|EFR43003.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP-like
protein [Dialister microaerophilus UPII 345-E]
Length = 249
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/165 (24%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 45 VFVTGQIEDHMATLICAQLL----------FLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+++ G I D A+ L L++ +K I++YINS GG V AG+AI +
Sbjct: 13 IYIHGDIIDDFASNFIDGLDGFVFPKAIKDELDSI-GEKPITVYINSDGGSVPAGVAIAN 71
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++ K + G S+ + + + ++ R NA +++H+PS G A+++ +
Sbjct: 72 MLKRHKAKTTAVIDGWCCSIATQIFFSCQE--RQIPKNAYLMIHKPSCTTVGDANELRKT 129
Query: 155 AQDIVKIKRRLNEIY--VKNCGKTYEEVEKTLDRDHIMSASEACD 197
A+ + I++ L E+Y T E++ K ++++ + EA +
Sbjct: 130 AEALDTIQKGLEEVYRAAAKEHITDEDITKYVNQESWFTGEEASE 174
>gi|156619231|gb|ABU88294.1| clp protease proteolytic subunit 2 [Chlamydomonas moewusii]
Length = 1010
Score = 63.9 bits (154), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 54/139 (38%), Gaps = 10/139 (7%)
Query: 70 NPQKEISLYINSPGGVVTAG-MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
+ EI + N + + + ++ + + G
Sbjct: 840 SLNHEILINKNPGTSQLECVVNPEVNNTSTNDRFVYYKGPVYCLTVPNSVFYVQRNGKAV 899
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
N+ I GQASDI +Q+I+KI+ + EIY + ++ + LDRD
Sbjct: 900 WTGNSSI---------QGQASDIWIDSQEIMKIRLDVAEIYSLATYRPRHKILRDLDRDF 950
Query: 189 IMSASEACDWGVVDKVLMS 207
++A+E +G+ D++ +
Sbjct: 951 YLTATETIHYGLADEIASN 969
Score = 43.1 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 33/64 (51%), Gaps = 7/64 (10%)
Query: 16 LGL-VPMVV----EQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAEN 70
+ + VP ++ E+ + DIY+ + + R+VF+ ++D + IC L+ + E+
Sbjct: 1 MPIGVPRIIYCWGEELP--AQWTDIYNFIFRRRMVFLMQYLDDELCNQICGLLINIHMED 58
Query: 71 PQKE 74
KE
Sbjct: 59 RSKE 62
>gi|308311770|gb|ADO27656.1| clpP [Rhizanthella gardneri]
Length = 74
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 38/70 (54%)
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++ S + Q + A++ +K++ + ++YV+ K + K ++RD MSA+E
Sbjct: 3 MIHQPASSFYESQVGEFILEAEEFLKLRETILKVYVQRTSKPLLVISKDIERDVFMSANE 62
Query: 195 ACDWGVVDKV 204
A +G+VD V
Sbjct: 63 ALVYGIVDLV 72
>gi|254503204|ref|ZP_05115355.1| Clp protease domain protein [Labrenzia alexandrii DFL-11]
gi|222439275|gb|EEE45954.1| Clp protease domain protein [Labrenzia alexandrii DFL-11]
Length = 267
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 21/172 (12%)
Query: 49 GQIEDHMATLICAQ--LLFLEAENP-------------QKEISLYINSPGGVVTAGMAIY 93
+ +D I Q L L + + Q+++++ INSPGG +G+A+Y
Sbjct: 20 TETDDDTVITIYGQIGLDPLSSADNSERRISRALRAIGQRDVTVNINSPGGNFFSGLAVY 79
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
+ ++ ++ +GQA+S S++ AG++ A +++H SG G D +
Sbjct: 80 NLLRMHSAKVTVNVIGQASSAASVVAMAGDE--ILMADGATLMVHNASGVTIGNKFDTQD 137
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR----DHIMSASEACDWGVV 201
+ I + EIY G V +DR S A + G+
Sbjct: 138 ATDILTDIDAVMAEIYAARSGADPSTVSGWMDRGRGAGTCFSVKRALEAGLA 189
>gi|29566898|ref|NP_818463.1| gp163 [Mycobacterium phage Omega]
gi|29425623|gb|AAN12805.1| gp163 [Mycobacterium phage Omega]
Length = 236
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/165 (21%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK------PP 102
+++D + + ++P+ + +L ++SPGG +G D +
Sbjct: 73 DEVDDDSIFALMDTVNAWHRQDPESKWNLIVDSPGGYCNSGFHAIDQLIEYSAWGGGSHY 132
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
I+ G AASMG ++L A ++ R NA+IL+H S G G ++ + I +
Sbjct: 133 ITMTVRGMAASMGGIILQAADE--RVMGRNAQILIHPISSGLYGGRGELHDYMGRIEMLT 190
Query: 163 RRLNEIYVKNCGK--TYEEVE-KTLDRDHIMSASEACDWGVVDKV 204
+ +++ GK ++++ + ++ + A EA ++ +VD++
Sbjct: 191 AQAEKLFKHRAGKKLPRKKLKNALMYKNWWIGAEEALEYALVDRI 235
>gi|289423867|ref|ZP_06425660.1| serine protease [Peptostreptococcus anaerobius 653-L]
gi|289155644|gb|EFD04316.1| serine protease [Peptostreptococcus anaerobius 653-L]
Length = 248
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 5/149 (3%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
+E K +++YINS GG + AG+AI + ++ G A S S++ +
Sbjct: 45 SEANNKTVNVYINSGGGDLFAGIAIANMLKRHNASTKAIIDGLAGSAASIIAFGCDTIEM 104
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLD 185
NA +++H+PS SG A D ++ A + ++ + Y+ G E + ++
Sbjct: 105 --PENAYLMIHKPSSWCSGNADDFKKMADTLDTLQEGIVNTYMAKVVEGVDSETINSMIN 162
Query: 186 RDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ ++ A D+ VD ++ I+ K
Sbjct: 163 NETWLTGKSAKDYFKVD-IVDKNAVIDNK 190
>gi|110633689|ref|YP_673897.1| peptidase S14, ClpP [Mesorhizobium sp. BNC1]
gi|110284673|gb|ABG62732.1| peptidase S14, ClpP [Chelativorans sp. BNC1]
Length = 234
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/164 (20%), Positives = 69/164 (42%), Gaps = 9/164 (5%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQ-KEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
VF G++ + + + L L +E+ + I LYINSPGG + + A Y ++ P+
Sbjct: 43 VFFVGEVTERKVAELVSVLDRLNSEHKALQSIYLYINSPGGDMDSAQAAYWAIKSSPIPV 102
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER---HAQDIVK 160
+ AS+ +++ + R A PN +L S + + +
Sbjct: 103 IAVNISTVASVAAVMFCGAAE--RAAFPNTYFILKPASVTLPEMSMQPVHFELSRELLKS 160
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLD-RDHIM--SASEACDWGVV 201
+Y + + +E+ ++ D+ + ASEA + G++
Sbjct: 161 YNEVFESVYRECTSLSADEISAVIESEDNRLLVRASEAREKGII 204
>gi|161899607|ref|XP_001713029.1| Clp protease [Bigelowiella natans]
gi|75756524|gb|ABA27417.1| Clp protease [Bigelowiella natans]
Length = 204
Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 34/159 (21%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 31 RSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFL--EAENPQKEISL---YINSPGGV 85
+ YDI S++ ++ I+F+ I + L+ +Q++FL +N + I + Y +
Sbjct: 32 KFYDISSKIYEKNIIFIGQPINTFIVQLLISQVIFLFMNRKNEKNRIFINTPYQTKNNFL 91
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
T+ + +Y+ +Q I+ S++ +G L+LS+G K R+ L N+ +L +
Sbjct: 92 YTSDLYLYNFLQTIRFEYSSYNIGLCNYDIGLILSSGIKSNRYGLKNSIVLFTETEINSK 151
Query: 146 G--QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
D +D++ + + K E ++K
Sbjct: 152 RISNKKDTVTFWKDLLYKQNLIIYNISKETQLKPETIKK 190
>gi|257468552|ref|ZP_05632646.1| Clp protease [Fusobacterium ulcerans ATCC 49185]
Length = 246
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 45 VFVTGQIEDHMATLICAQLLFLE-------------AENPQKEISLYINSPGGVVTAGMA 91
+F+ G IE+ + L+ AE KE+ ++INS GG V AG+A
Sbjct: 17 IFINGDIENDAYNDGIMEWFGLKDTNVYPLEVKKALAEANNKEVHVHINSYGGEVFAGVA 76
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I + ++ K + G AAS S++ ++ NA +++H+ S G G A D+
Sbjct: 77 ICNMLKNYKGKTVAYVDGLAASAASIIAFGCDE--VIIPNNAYLMIHRVSCGIWGNADDL 134
Query: 152 ERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
+ + K++ + Y + G T E++ + + + EA +
Sbjct: 135 RTQIEVLEKLEDGIANTYEEKAVEGVTREDILNLMKEETWFTGEEAAKF 183
>gi|282863188|ref|ZP_06272248.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. ACTE]
gi|282562170|gb|EFB67712.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Streptomyces
sp. ACTE]
Length = 54
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 28/49 (57%)
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
++ + ++ G+ ++V+ L+RD ++ A A +G++D V+ +R
Sbjct: 1 MRETFTAMPARHTGRPAQDVDADLERDTVLDAQAAQAYGLIDHVIENRT 49
>gi|317062810|ref|ZP_07927295.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Fusobacterium ulcerans ATCC 49185]
gi|313688486|gb|EFS25321.1| ATP-dependent endopeptidase clp proteolytic subunit clpP
[Fusobacterium ulcerans ATCC 49185]
Length = 251
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 17/169 (10%)
Query: 45 VFVTGQIEDHMATLICAQLLFLE-------------AENPQKEISLYINSPGGVVTAGMA 91
+F+ G IE+ + L+ AE KE+ ++INS GG V AG+A
Sbjct: 22 IFINGDIENDAYNDGIMEWFGLKDTNVYPLEVKKALAEANNKEVHVHINSYGGEVFAGVA 81
Query: 92 IYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDI 151
I + ++ K + G AAS S++ ++ NA +++H+ S G G A D+
Sbjct: 82 ICNMLKNYKGKTVAYVDGLAASAASIIAFGCDE--VIIPNNAYLMIHRVSCGIWGNADDL 139
Query: 152 ERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
+ + K++ + Y + G T E++ + + + EA +
Sbjct: 140 RTQIEVLEKLEDGIANTYEEKAVEGVTREDILNLMKEETWFTGEEAAKF 188
>gi|160700656|ref|YP_001552336.1| gp7 [Mycobacterium phage Giles]
gi|159136606|gb|ABW88402.1| gp7 [Mycobacterium phage Giles]
Length = 396
Score = 63.1 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/175 (22%), Positives = 72/175 (41%), Gaps = 7/175 (4%)
Query: 45 VFVTGQIEDHM-ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
+++ G I + AQ + +++ +NSPGG GMAI + +
Sbjct: 19 IYIYGDIGQTFWDDGVSAQSFIDQLAEVSGPVNIRVNSPGGSAWDGMAIANAIIRHPAKT 78
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+TF G AAS S++ AG++ + R +LH G A D+ A + +
Sbjct: 79 TTFIDGLAASAASIVAFAGDEVVVSKW--GRAMLHNAHAMVMGTADDMREVATQLDALNA 136
Query: 164 RLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS--RIDIEEK 214
+ Y G + + ++ SA E + G+V ++ S R ++E+
Sbjct: 137 NMAAYYADRSTGGDDAKAFAAAMAKETWYSADELLEAGLVTRIDNSGVREEVEKA 191
>gi|294783567|ref|ZP_06748891.1| ClpP protease family protein [Fusobacterium sp. 1_1_41FAA]
gi|294480445|gb|EFG28222.1| ClpP protease family protein [Fusobacterium sp. 1_1_41FAA]
Length = 238
Score = 62.7 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/167 (20%), Positives = 70/167 (41%), Gaps = 15/167 (8%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQK-----------EISLYINSPGGVVTAGMAIY 93
+++ G I + L N E+ ++INS GG V AG+AI
Sbjct: 19 IYINGDIVSDSNNDGFYEFFDLNNPNVYPLDVANALKEAGEVHVHINSYGGDVFAGLAIS 78
Query: 94 DTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
+ ++ K + G +AS S++ + NA +++H+ S G G A D +
Sbjct: 79 NMLKNHKAKTVAYVDGLSASSASIIAFGCNE--IVIPSNAYLMIHRVSCGLFGNADDFLK 136
Query: 154 HAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
+ + KI+ + + Y++ G T E++ + + + + ++
Sbjct: 137 QVEVMEKIEEGIVDTYMEKAVEGVTKEQIYDLMKAETWFTGKDCLNY 183
>gi|229194208|ref|ZP_04321063.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228589269|gb|EEK47233.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
Length = 173
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 79 INSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLH 138
+NSPGG V G+AIY+ ++ I G AAS S++ A ++ + +++H
Sbjct: 1 MNSPGGDVFDGIAIYNQLKNHPAKIIINVDGLAASAASIIAMAADE--LIMNTGSMLMIH 58
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDW 198
+ S G DI + + I + L +IY+ E+E + + +A+EA +
Sbjct: 59 EASTWTWGTKLDIRKTLNALEGIDKSLADIYMTRYQGERSEIETMIANETWFTANEAVEI 118
Query: 199 GVVDKVLMSRIDIE 212
G+ KV D +
Sbjct: 119 GLAHKVNEHVEDDD 132
>gi|226948757|ref|YP_002803848.1| serine protease [Clostridium botulinum A2 str. Kyoto]
gi|226843453|gb|ACO86119.1| serine protease [Clostridium botulinum A2 str. Kyoto]
Length = 253
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/152 (24%), Positives = 68/152 (44%), Gaps = 9/152 (5%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQA 111
+D A L+ N + +YINS GG V AG+AIY ++ + G A
Sbjct: 50 DDDTCPQDVANF--LKELNSFDNLDIYINSGGGSVFAGIAIYHQLKRHNGFKTVHIDGIA 107
Query: 112 ASMGSLLLSAGEKGMRFALPNARILLHQP---SGGFSGQASDIERHAQDIVKIKRRLNEI 168
AS+ S++ AG+K +A+ ++H+P S A ++ + A + + + I
Sbjct: 108 ASITSVISCAGDK--VIIPKSAQFMIHKPTASYFWTSLNADELRKEADTLDICQDSIRNI 165
Query: 169 YVKNCG--KTYEEVEKTLDRDHIMSASEACDW 198
Y++N T EE+ ++ + + D+
Sbjct: 166 YMENVKEDITEEEINNLINAETWFTGETVTDY 197
>gi|317128807|ref|YP_004095089.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
gi|315473755|gb|ADU30358.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
Length = 243
Score = 62.3 bits (150), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/154 (23%), Positives = 78/154 (50%), Gaps = 8/154 (5%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP---PISTFCMGQAASMGSLLL 119
+ L + K+I+LY+NS GG V +G+++ + ++ + I+ + G A S+ S+L+
Sbjct: 40 IRELLDNHVGKKINLYVNSGGGSVFSGLSMLNMLKRAREKGSYITAYVDGLAGSIASVLI 99
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTY 177
K + N+ I++H+ G G A+D + A+D+ KI + Y N G
Sbjct: 100 FGANK--IYCPSNSYIMIHRAWTGMYGNATDFLKMAEDLEKIDEGILNTYKDNLREGVDI 157
Query: 178 EEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
E +++ +D++ ++ +A + + +V+ +
Sbjct: 158 ETIKEMVDKETWLTGEDASKYFNI-EVVEENKAV 190
>gi|215433747|gb|ACJ66732.1| putative ATP-dependent Clp protease proteolytic subunit
[Arabidopsis thaliana]
Length = 99
Score = 62.3 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 147 QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
ASD+ A++++ + L E+ K+ G + E V + R + M A +A ++GV+D++L
Sbjct: 14 PASDVLIRAKEVITNRDILVELLSKHTGNSVETVANVMRRPYYMDAPKAKEFGVIDRIL 72
>gi|312959274|ref|ZP_07773792.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens WH6]
gi|311286534|gb|EFQ65097.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pseudomonas
fluorescens WH6]
Length = 384
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 36/168 (21%), Positives = 72/168 (42%), Gaps = 9/168 (5%)
Query: 42 ERIV--FVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
ER++ FV G+I A L ++ + + NS GG + G+A+++ +
Sbjct: 35 ERVIEVFVYGEIGAWGITANQFVQDLRAMD--DGVSPVIAAFNSIGGDLFDGLAMHNALS 92
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQD 157
+ + AAS S+ + + + A NA +++H P +G A D + A
Sbjct: 93 RLGERCTGRIDALAASAASVAVCGAHRVVIAA--NAMLMIHNPWTYAAGDAEDFRKVADV 150
Query: 158 IVKIKRRLNEIYVKNC-GKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + + Y E+ + +D + ++A+EA G+ D+V
Sbjct: 151 LDQTMEAIIAAYKAKAPDIDEVELRRLVDAETWLTANEAVALGLADEV 198
>gi|255571636|ref|XP_002526763.1| conserved hypothetical protein [Ricinus communis]
gi|223533890|gb|EEF35617.1| conserved hypothetical protein [Ricinus communis]
Length = 78
Score = 62.0 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
++ +G + + + A++++K+ L IY + K V + ++RD MSA E
Sbjct: 6 MIHQPIAGFYEDKIGEFVLEAKELLKLCEILTRIYAQRTRKHLWVVSEDMERDVFMSAVE 65
Query: 195 ACDWGVVDKV 204
A G+VD V
Sbjct: 66 AQAHGIVDLV 75
>gi|284992263|ref|YP_003410817.1| peptidase S14 ClpP [Geodermatophilus obscurus DSM 43160]
gi|284065508|gb|ADB76446.1| peptidase S14 ClpP [Geodermatophilus obscurus DSM 43160]
Length = 128
Score = 62.0 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 35 IYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGV 85
++ LL+ERIV + Q++D +A ICAQ+L L A++P +++ LYINSPGG
Sbjct: 27 VFHCLLRERIVSLGSQVDDDIANQICAQML-LSADDPHRDVHLYINSPGGS 76
>gi|295100235|emb|CBK97780.1| Protease subunit of ATP-dependent Clp proteases [Faecalibacterium
prausnitzii L2-6]
Length = 410
Score = 62.0 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 31/171 (18%), Positives = 67/171 (39%), Gaps = 14/171 (8%)
Query: 48 TGQIEDHMATLICAQ-------LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ--- 97
T I+ I Q L L+ +I + ++S GG + I++ ++
Sbjct: 38 TQPIDWWTDKPIPGQYIIESEFLSDLQQVENCPQIIIRMDSLGGDAGVSILIHNRLRELA 97
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDIERHA 155
++ G A S GSL++ A + P++ +++H+ G A ++ + A
Sbjct: 98 AKGTKLTCIVDGVAMSGGSLIMCACDTVKVN--PSSLVMIHKCWTPIRGALNADELRKAA 155
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + IY + G + + + M+ EA + G +++L
Sbjct: 156 EANDAWDKSQVAIYKRKTGLSETVLLHMMSDTTYMTGKEAIEKGFANELLD 206
>gi|229142709|ref|ZP_04271182.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228640752|gb|EEK97110.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 136
Score = 62.0 bits (149), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMS 191
+++H SG A+ + + A DI +I + + + Y+ G + +++ LD + +S
Sbjct: 1 MMMIHNAWTYASGNANQLRKAADDIERINQSMVQHYLTRAGDKLDEDTLKQLLDAETWLS 60
Query: 192 ASEACDWGVVDKVLM 206
A EA ++G+ D+++
Sbjct: 61 AEEAMNYGLCDEIIS 75
>gi|152985368|ref|YP_001348470.1| hypothetical protein PSPA7_3110 [Pseudomonas aeruginosa PA7]
gi|150960526|gb|ABR82551.1| putative Clp protease [Pseudomonas aeruginosa PA7]
Length = 184
Score = 61.6 bits (148), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 16/172 (9%)
Query: 39 LLKERIVFVTGQIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ K+ I+ TG I + CA+ L EAE + I+ + GG + G +Y+
Sbjct: 1 MSKQHIIHFTGPINSSTCGNLINTCAKALQQEAEELRINIA----TMGGECSYGFTLYNF 56
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + P+ T +G SMG++L AGE+ A +++ L H A D R A
Sbjct: 57 LRALPVPVHTHNLGTVESMGNILFLAGERRSACA--HSKFLFHPF-HWTLHGAVDHARMA 113
Query: 156 QDIVKIKRRL---NEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVV 201
+ + + L +I ++ E + + I+ +A G++
Sbjct: 114 EYAMSLDYDLQLYAQIVAEHTRDAPERLDIPRYLMAYPRILGPDDALACGLI 165
>gi|226313002|ref|YP_002772896.1| translocation-enhancing protein [Brevibacillus brevis NBRC 100599]
gi|226095950|dbj|BAH44392.1| translocation-enhancing protein [Brevibacillus brevis NBRC 100599]
Length = 274
Score = 61.6 bits (148), Expect = 8e-08, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E N + + + +N+ GG V AG+AI + + + P+ T +G S+G
Sbjct: 98 EHLIPQLVAAEQNNKIEGVLVILNTVGGDVEAGLAIAEMVASLSKPVVTLVLGGGHSIGV 157
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ AG I +G + + + + K++ R+ ++ +
Sbjct: 158 PIAVAGSYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQDRVVSFIARHSKVS 213
Query: 177 YEEVEKTLDRDHIMSAS--------EACDWGVVDKV 204
E+ + + R ++ +A +G++D+V
Sbjct: 214 EEKFRELMTRTGELTRDIGTNVIGVDAVKYGLIDEV 249
>gi|224025320|ref|ZP_03643686.1| hypothetical protein BACCOPRO_02059 [Bacteroides coprophilus DSM
18228]
gi|237711831|ref|ZP_04542312.1| predicted protein [Bacteroides sp. 9_1_42FAA]
gi|317475026|ref|ZP_07934295.1| hypothetical protein HMPREF1016_01274 [Bacteroides eggerthii
1_2_48FAA]
gi|224018556|gb|EEF76554.1| hypothetical protein BACCOPRO_02059 [Bacteroides coprophilus DSM
18228]
gi|229454526|gb|EEO60247.1| predicted protein [Bacteroides sp. 9_1_42FAA]
gi|316908929|gb|EFV30614.1| hypothetical protein HMPREF1016_01274 [Bacteroides eggerthii
1_2_48FAA]
Length = 412
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 37/175 (21%), Positives = 66/175 (37%), Gaps = 13/175 (7%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
++ G++ + + + FLE I + INS GG V GM+ Y T+
Sbjct: 20 VIRFFGRVTEETTSRFNDEFDFLENIIRPSCIRVLINSEGGSVLYGMSTYSTIANATVDT 79
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
G AASM S++ +AG++ + I D + + +
Sbjct: 80 ECIIEGVAASMASIIWAAGKRSLMRDYAILMIHNPMLPDD------DGGEPSDMVTAFTK 133
Query: 164 RLNEIYVKNCGKTYEEVEKTLD----RD-HIMSASEACDWGVV--DKVLMSRIDI 211
++ IY K G E V +D +D A A G++ + V+ + +
Sbjct: 134 QIETIYRKRFGLKAEHVRAIMDGQAGKDGTYFDAQAAVKAGIIPAEHVIHTSKQL 188
>gi|255557516|ref|XP_002519788.1| conserved hypothetical protein [Ricinus communis]
gi|223541027|gb|EEF42584.1| conserved hypothetical protein [Ricinus communis]
Length = 82
Score = 61.2 bits (147), Expect = 9e-08, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 127 RFALPNARILLHQPSGGFSG-QASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
F R+++HQP GF Q + ++++K+ L IY + GK V + ++
Sbjct: 1 MFLFDKKRVMIHQPIAGFYEAQIGEFVLEVEELMKLCEILTRIYAQRMGKPLWVVSEDME 60
Query: 186 RDHIMSASEACDWGVVDKV 204
+D MSA EA G+VD V
Sbjct: 61 KDVFMSAVEAQAHGIVDLV 79
>gi|224475988|ref|YP_002633594.1| putative Clp protease, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
gi|222420595|emb|CAL27409.1| putative Clp protease, phage associated [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 238
Score = 60.8 bits (146), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
Query: 70 NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFA 129
+ +++ + INS GG V +G IY ++ ++ +G AAS S++ AG+
Sbjct: 37 STNEDVEVIINSGGGEVMSGSEIYTALKSYAGNVNVKVVGVAASAASVIAMAGDTIEM-- 94
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A++++H S G + ++ + + R + Y+ GK+ +E+ ++ +
Sbjct: 95 SPTAQMMIHNASTLAYGDDRAMASASKMLNSVNRGIANAYMNKTGKSEQEILDLMNEESW 154
Query: 190 MSASEACDWGVVD 202
MSA +A D G D
Sbjct: 155 MSAQDAVDLGFAD 167
>gi|116050125|ref|YP_791059.1| hypothetical protein PA14_36350 [Pseudomonas aeruginosa UCBPP-PA14]
gi|115585346|gb|ABJ11361.1| conserved hypothetical protein [Pseudomonas aeruginosa UCBPP-PA14]
Length = 184
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 39 LLKERIVFVTGQIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ K+ I+ TG I + CA++L EAE + I+ + GG + G +Y+
Sbjct: 1 MSKQHIIHFTGPINSSTCGNLINTCAKILQQEAEELRINIA----TMGGECSYGFTLYNF 56
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + PI T +G SMG++L AGE+ R A +++ L H A D R A
Sbjct: 57 LRALPVPIHTHNLGTVESMGNILFLAGER--RSASAHSKFLFHP-FHWTLHGAVDHARMA 113
Query: 156 QDIVKIKRRLN---EIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
+ + + L I +N E + + I+ +A G++ V
Sbjct: 114 EYAMSLDYDLELYARIVAENTRDAPERLDIPSYLMAYPRILGPEDALACGLIHTV 168
>gi|15597385|ref|NP_250879.1| hypothetical protein PA2189 [Pseudomonas aeruginosa PAO1]
gi|107101615|ref|ZP_01365533.1| hypothetical protein PaerPA_01002659 [Pseudomonas aeruginosa PACS2]
gi|218891858|ref|YP_002440725.1| hypothetical protein PLES_31361 [Pseudomonas aeruginosa LESB58]
gi|254235215|ref|ZP_04928538.1| hypothetical protein PACG_01105 [Pseudomonas aeruginosa C3719]
gi|9948210|gb|AAG05577.1|AE004645_11 hypothetical protein PA2189 [Pseudomonas aeruginosa PAO1]
gi|126167146|gb|EAZ52657.1| hypothetical protein PACG_01105 [Pseudomonas aeruginosa C3719]
gi|218772084|emb|CAW27863.1| hypothetical protein PLES_31361 [Pseudomonas aeruginosa LESB58]
Length = 184
Score = 60.4 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 39 LLKERIVFVTGQIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ K+ I+ TG I + CA++L EAE + I+ + GG + G +Y+
Sbjct: 1 MSKQHIIHFTGPINSSTCGNLINTCAKVLQQEAEELRINIA----TMGGECSYGFTLYNF 56
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + PI T +G SMG++L AGE+ R A +++ L H A D R A
Sbjct: 57 LRALPVPIHTHNLGTVESMGNILFLAGER--RSASAHSKFLFHP-FHWTLHGAVDHARMA 113
Query: 156 QDIVKIKRRLN---EIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
+ + + L I +N E + + I+ +A G++ V
Sbjct: 114 EYAMSLDYDLELYARIVAENTRDAPERLDIPRYLMAYPRILGPEDALACGLIHTV 168
>gi|229605031|ref|YP_002875730.1| putative scaffolding protein/Clp protease [Lactococcus phage P087]
gi|227826014|gb|ACP41738.1| putative scaffolding protein/Clp protease [Lactococcus phage P087]
Length = 346
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 58/138 (42%)
Query: 68 AENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMR 127
A +++ + + + GG V A+ + ++ G AS G++L S ++
Sbjct: 38 ANELGEDLEIDLTTNGGSVMDAGAMVSELNKLEGKSKVHIQGMVASAGTVLASVFDEVSM 97
Query: 128 FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
I + + ++E Q + I ++ +IY G + +E + ++
Sbjct: 98 SDFSYFLIHYPRQQYYGILRPQELEELTQQLGAITQQSIDIYEAKTGLDRDVIEDYMAKE 157
Query: 188 HIMSASEACDWGVVDKVL 205
+ SAS+A D G VD ++
Sbjct: 158 SMFSASQAKDLGFVDSIV 175
>gi|299131681|ref|ZP_07024876.1| peptidase S14 ClpP [Afipia sp. 1NLS2]
gi|298591818|gb|EFI52018.1| peptidase S14 ClpP [Afipia sp. 1NLS2]
Length = 193
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 3/131 (2%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I L + GG + G+++Y+ + I + +G +S+G + + R A ++
Sbjct: 46 IHLLFQTTGGGIGEGISLYNLFRSSPVEIHLYNVGSVSSIGVIAYLGATR--RIASKHSA 103
Query: 135 IL-LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+ + A + A+ + R I ++ + E+ D +S+
Sbjct: 104 FMIHRSYLSPVAANADRMAASAEYLAIEDTRTESILKEHTKIPPTKWEQHKFSDVWISSE 163
Query: 194 EACDWGVVDKV 204
EA +G+ +++
Sbjct: 164 EAKSFGIAEEI 174
>gi|229142384|ref|ZP_04270901.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228641076|gb|EEK97390.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 136
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/75 (24%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCG--KTYEEVEKTLDRDHIMS 191
+++H SG A + + A DI +I + + + Y+ G + +++ LD + +S
Sbjct: 1 MMMIHNAWTYASGNADQLRKAADDIERINKSMVQHYLTRAGDKLDEDTLKQLLDAETWLS 60
Query: 192 ASEACDWGVVDKVLM 206
A EA +G+ D+++
Sbjct: 61 AEEAMGYGLCDEIIS 75
>gi|254240611|ref|ZP_04933933.1| hypothetical protein PA2G_01270 [Pseudomonas aeruginosa 2192]
gi|296389396|ref|ZP_06878871.1| hypothetical protein PaerPAb_14651 [Pseudomonas aeruginosa PAb1]
gi|313110977|ref|ZP_07796817.1| hypothetical protein PA39016_002870053 [Pseudomonas aeruginosa
39016]
gi|126193989|gb|EAZ58052.1| hypothetical protein PA2G_01270 [Pseudomonas aeruginosa 2192]
gi|310883319|gb|EFQ41913.1| hypothetical protein PA39016_002870053 [Pseudomonas aeruginosa
39016]
Length = 184
Score = 60.0 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 16/175 (9%)
Query: 39 LLKERIVFVTGQIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDT 95
+ K+ I+ TG I + CA++L EAE + I+ + GG + G +Y+
Sbjct: 1 MSKQHIIHFTGPINSSTCGNLINTCAKVLQQEAEELRINIA----TMGGECSYGFTLYNF 56
Query: 96 MQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
++ + PI T +G SMG++L AGE+ R A +++ L H A D R A
Sbjct: 57 LRALPVPIHTHNLGTVESMGNILFLAGER--RSASAHSKFLFHP-FHWTLHGAVDHARMA 113
Query: 156 QDIVKIKRRLN---EIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
+ + + L I +N E + + I+ +A G++ V
Sbjct: 114 EYAMSLDYDLELYARIVAENTRDAPERLDIPSYLMAYPRILGPEDALACGLIHTV 168
>gi|323449361|gb|EGB05250.1| hypothetical protein AURANDRAFT_9147 [Aureococcus anophagefferens]
Length = 57
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 34/57 (59%), Positives = 45/57 (78%)
Query: 53 DHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
D +A ++ AQLL+L ++P K+I+LYINSPGG V+AGMAIYDTMQF+ +ST C G
Sbjct: 1 DEVANVLVAQLLYLANDDPTKDITLYINSPGGSVSAGMAIYDTMQFVPCDVSTVCFG 57
>gi|109521505|ref|YP_655933.1| gp68 [Mycobacterium phage Wildcat]
gi|91980957|gb|ABE67673.1| gp68 [Mycobacterium phage Wildcat]
Length = 185
Score = 59.3 bits (142), Expect = 3e-07, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 70/168 (41%), Gaps = 12/168 (7%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK------ 100
V+G++ A L + E+P+ + IN PGG +G A+Y+ +
Sbjct: 19 VSGELNAESVDFYLATLFEWDQEDPEATWKILINCPGGETESGTALYEELCAYSRRGGGT 78
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
I T GQ ASM +LL+ AG+ R + L H P G + A D+
Sbjct: 79 HEIVTVAAGQCASMATLLMQAGD--WRVSGEATTWLFHMPETGVGETMQTMADAAADLDH 136
Query: 161 IKRRL---NEIYVKNCGKTYEEVEKTLDRDHIM-SASEACDWGVVDKV 204
+K+ + + + ++ T + K + + + A +G VD+V
Sbjct: 137 LKKWMKITDAMLLERTNLTPDCYYKQITGGMWLLTGHAAKTYGFVDEV 184
>gi|297619020|ref|YP_003707125.1| hypothetical protein Mvol_0492 [Methanococcus voltae A3]
gi|297377997|gb|ADI36152.1| hypothetical protein Mvol_0492 [Methanococcus voltae A3]
Length = 170
Score = 58.5 bits (140), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 68/165 (41%), Gaps = 5/165 (3%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
F+ G+IE+ M + + E ++ +E +L+++S GG + M++ + ++
Sbjct: 6 FLNGRIEEEMVDKLIKFIA--ENDDVAQECTLWLHSQGGGIAHSMSVINLIESSGIFKKV 63
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
C G+ S ++ + K RFA N H G + A+
Sbjct: 64 VCSGEVGSAALNIILSFPKDARFAYDNTVFFTHGICYENGGTVEEYSTLAKFKELYDNIT 123
Query: 166 NEIYVKNCGKTYEEVEKTLDRD---HIMSASEACDWGVVDKVLMS 207
N+ + +E + + + +S++EA + G++ ++ +
Sbjct: 124 NKYLKNESNDLKKWIEDNKEYNLKLNYISSNEALNMGLITNIIDN 168
>gi|295108195|emb|CBL22148.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus obeum
A2-162]
Length = 87
Score = 58.1 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 136 LLHQPSGG---FSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++HQPS GQA+DI+ + + K K RLN I +N G+T EEV +R + +SA
Sbjct: 1 MIHQPSIHRNGVQGQATDIKIVSDQLQKSKLRLNRILAENTGRTIEEVVMATERYNFLSA 60
Query: 193 SEACDWGV 200
EA D+G+
Sbjct: 61 GEALDFGL 68
>gi|307102716|gb|EFN50985.1| hypothetical protein CHLNCDRAFT_141635 [Chlorella variabilis]
Length = 91
Score = 58.1 bits (139), Expect = 8e-07, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 27/51 (52%)
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A ++ + + + G+ EEV + + R+ + +A ++G++DKV+
Sbjct: 4 ANELENSTQTYVDFMSRFTGRDKEEVRRDVGRNRYFTPDQAVEYGIIDKVM 54
>gi|297619361|ref|YP_003707466.1| peptidase S14 ClpP [Methanococcus voltae A3]
gi|297378338|gb|ADI36493.1| peptidase S14 ClpP [Methanococcus voltae A3]
Length = 190
Score = 57.7 bits (138), Expect = 9e-07, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 85/178 (47%), Gaps = 10/178 (5%)
Query: 41 KERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
KE ++ ++ + T + + E + L I+SPGG VTAG++ Y+ ++ I
Sbjct: 11 KEVVIRFMRPVDQNSITSLITAIDK-EMSSGVYRFKLLISSPGGDVTAGLSAYNYLKGIP 69
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS----DIERHAQ 156
++T G S+G ++ AG++ R+A P +R L+H FS ++ DIE +
Sbjct: 70 AYVTTHNFGSVDSIGIVIFCAGQE--RYASPQSRFLIHDVRSVFSSTSNLGEKDIEERLK 127
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ ++++ N ++++ + ++ EA + G++ ++ R ++ K
Sbjct: 128 SLKVDMENISKVISSNSNLEASQIQEFMLERTTLNPEEAVNMGLITEI---RSELYSK 182
>gi|312961447|ref|ZP_07775950.1| clp protease (protease subunit) [Pseudomonas fluorescens WH6]
gi|311284342|gb|EFQ62920.1| clp protease (protease subunit) [Pseudomonas fluorescens WH6]
Length = 183
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 31/167 (18%), Positives = 67/167 (40%), Gaps = 8/167 (4%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
++ TG + + + + L + + L I + GG + G +Y+ + + P
Sbjct: 4 HVINFTGPVSASTCSQLIEKA-SLAVQRDASGLVLNIATMGGECSYGFTMYNFLLSLPIP 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSG--QASDIERHAQDIVK 160
+ T +G SMG+++ AGE+ R A +++ L H G S + +A +
Sbjct: 63 VHTHNLGTVESMGNIIFLAGER--RTACRHSKFLFHPFHWHLQGAVDHSRMSEYAMSLDY 120
Query: 161 IKRRLNEIYVKNCGKTYEEVEK---TLDRDHIMSASEACDWGVVDKV 204
+ I + E++E + I+ +A G++ +
Sbjct: 121 DLQLYARIVAERTPDAAEKLETEKYLIAAPRILDPQQALAAGLIHGI 167
>gi|228998550|ref|ZP_04158137.1| Clp protease [Bacillus mycoides Rock3-17]
gi|228761018|gb|EEM09977.1| Clp protease [Bacillus mycoides Rock3-17]
Length = 221
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/132 (24%), Positives = 61/132 (46%), Gaps = 2/132 (1%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
I++++NS GG V +AI + ++ I G AAS S++ A +K N
Sbjct: 31 INVHVNSGGGDVFESIAISNLLKNHSAQIVIHIDGLAASGASVIAMAADK--IIMPKNTM 88
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++H+ +G A + + A + KI + E Y E+E+ L + ++A E
Sbjct: 89 MMIHRAWTYAAGNAEGLRKVADRLDKIDTAVTESYTSRFVGERTELEELLAEETWLTAEE 148
Query: 195 ACDWGVVDKVLM 206
+G D+++
Sbjct: 149 CKTFGFCDEIVD 160
>gi|291533785|emb|CBL06898.1| hypothetical protein MHY_22570 [Megamonas hypermegale ART12/1]
Length = 26
Score = 57.7 bits (138), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/26 (80%), Positives = 25/26 (96%)
Query: 21 MVVEQTNRGERSYDIYSRLLKERIVF 46
MVVEQ+ RGER+YDIYSRLLK+RI+F
Sbjct: 1 MVVEQSGRGERAYDIYSRLLKDRIIF 26
>gi|212722416|ref|NP_001132797.1| hypothetical protein LOC100194286 [Zea mays]
gi|194695418|gb|ACF81793.1| unknown [Zea mays]
Length = 158
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 20 PMVVEQTNRGERSYDIYSRLLKERIVFVTGQIEDHMATLICAQLLFLEAENPQ 72
PMV+E R + S+L + RI+ G +ED MA +I AQLL+L+A +P
Sbjct: 88 PMVME------RFQSVVSQLFQHRIIRCGGPVEDDMANIIVAQLLYLDAIDPN 134
>gi|187933709|ref|YP_001885481.1| Clp protease [Clostridium botulinum B str. Eklund 17B]
gi|187721862|gb|ACD23083.1| Clp protease family protein [Clostridium botulinum B str. Eklund
17B]
Length = 232
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/156 (26%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + K I + +N+ GG V AG+AI + ++ + P + G S+G
Sbjct: 66 EHIIPQLIDLEQNDNVKGILIVLNTVGGDVEAGLAIAEMIRSMSKPTVSIVTGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + + K++ R+NE +
Sbjct: 126 PLATASD--YSFITPSATMIVHPVR--MNGFIIGVAQTFEYFKKMQERINEFITRTSHIK 181
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
EE+EK + D I+ +A D G++D+V
Sbjct: 182 EEELEKFMLQTNELLNDVGTILIGKQAVDCGLIDEV 217
>gi|303239710|ref|ZP_07326234.1| peptidase S14 ClpP [Acetivibrio cellulolyticus CD2]
gi|302592647|gb|EFL62371.1| peptidase S14 ClpP [Acetivibrio cellulolyticus CD2]
Length = 93
Score = 57.3 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/91 (30%), Positives = 53/91 (58%), Gaps = 2/91 (2%)
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
M + LLS+G KG R AL N++I++ SG + SD ++ + I + ++NEI++KN
Sbjct: 1 MAAFLLSSGTKGKRIALENSKIVMAPLSGKNTSDLSDAQK--KSIETVINKMNEIWLKNT 58
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
G+ + + + + EA D+G++D++
Sbjct: 59 GQDIARIINDSENLRVFNQHEARDYGIIDRI 89
>gi|169830994|ref|YP_001716976.1| peptidase S14, ClpP [Candidatus Desulforudis audaxviator MP104C]
gi|169637838|gb|ACA59344.1| peptidase S14, ClpP [Candidatus Desulforudis audaxviator MP104C]
Length = 266
Score = 57.3 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + I + +N+ GG V AG+AI + + I P + +G S+G
Sbjct: 83 EHILPQLVALEQHPDIEGILVILNTVGGDVEAGLAIAEMLSSISKPTVSLVLGGGHSIGV 142
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +GQ + + + + K++ R+ VK+ T
Sbjct: 143 PIAVCTSYSYIAETASMTI----HPIRITGQILTVPQTFEYLEKMQDRVVRFVVKHSRIT 198
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + + RD ++ EA D G++D+V
Sbjct: 199 EERFRELMFRTGELARDIGTVLIGKEAVDCGLIDEV 234
>gi|167771987|ref|ZP_02444040.1| hypothetical protein ANACOL_03360 [Anaerotruncus colihominis DSM
17241]
gi|167665785|gb|EDS09915.1| hypothetical protein ANACOL_03360 [Anaerotruncus colihominis DSM
17241]
Length = 409
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 32/144 (22%), Positives = 55/144 (38%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L L + +++ INS GG + GMAIY+ ++ + + G AAS S++ AG
Sbjct: 69 LEDLAQVKGKSRVTIRINSIGGDLYTGMAIYNQLKALPGQKTVVIDGIAASAASVIAMAG 128
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ I S ++ + + R E+Y G + V
Sbjct: 129 DVIQIPVGGTVMIHEPSAFLADSYDQQQLKGVLKMLDAASRSAAEVYAGKTGLEVDAVRS 188
Query: 183 TLDRDHIMSASEACDWGVVDKVLM 206
+ + M EA D G ++L
Sbjct: 189 MMAKTTWMIGQEAVDKGFATELLE 212
>gi|229140600|ref|ZP_04269155.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
gi|228643161|gb|EEK99437.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST26]
Length = 164
Score = 56.9 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
MAIY+ ++ + + G S+ S++ AG+K NA +++H+P G G A+
Sbjct: 1 MAIYNMIKRHEGYKTVHIDGLGGSIASVIAFAGDK--LIVPSNAYLMIHKPWNGTYGNAN 58
Query: 150 DIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
D + A D+ I+ + +Y N G EE+ + + + ++ +A ++
Sbjct: 59 DFRKMADDLDAIEEGIINVYKDNLKEGVDIEEIREMVQNETWLNGLKASEY 109
>gi|30316458|gb|AAP31400.1| hypothetical protein [Pseudomonas putida]
Length = 183
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 59/165 (35%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + L I + GG + G +Y+ ++ +
Sbjct: 4 HIIHFTGPINSSTCGNLI-NTCSRALQQGAGILQLNIATMGGECSYGFTLYNFLRALPVA 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE+ + + S + + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGERRTACSFSKFLFHPFHWTLHGSVDHARMAEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCG---KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+I + + + + I+S EA + G++ V
Sbjct: 123 ELYAQIVAERTEGAAQVLDVPRYLMAHPRILSPREALENGMIHSV 167
>gi|317480215|ref|ZP_07939322.1| hypothetical protein HMPREF1007_02439 [Bacteroides sp. 4_1_36]
gi|316903597|gb|EFV25444.1| hypothetical protein HMPREF1007_02439 [Bacteroides sp. 4_1_36]
Length = 478
Score = 56.6 bits (135), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+++ + I + + Y+ GK+ +++ ++ + M A+EA +WG +DK++
Sbjct: 219 DTIKELQNKKKSAEAIDLMIAQKYINRSGKSLKDIITLMEEERWMPAAEAKEWGFIDKII 278
>gi|260642126|ref|ZP_05859260.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
finegoldii DSM 17565]
gi|260623285|gb|EEX46156.1| ATP-dependent Clp protease proteolytic subunit [Bacteroides
finegoldii DSM 17565]
Length = 239
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKT-LD-RDHIMSAS 193
+LH GG G +++ ++I ++ L E+Y GK EE+ D +DH + A
Sbjct: 1 MLHSVQGGCYGNKDEMKDCIREIEALEDTLCEMYATRMGKDKEEIRAMYFDGKDHWLRAD 60
Query: 194 EACDWGVVDKVLMSRIDIEEK 214
EA G++D + + E+
Sbjct: 61 EALALGLIDGIYDADPVPEDS 81
>gi|89894720|ref|YP_518207.1| hypothetical protein DSY1974 [Desulfitobacterium hafniense Y51]
gi|89334168|dbj|BAE83763.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 209
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL +E + I L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 38 EHVIPQLFAVEQNPKVEGILLILNTAGGDVEAGLAISELVSSLSKPSVSIVLGGGHSIGI 97
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + ++ F P + LH G + + + K++ R+N +++ T
Sbjct: 98 PIAVSCDR--SFIAPTGTMTLHPIRYT--GLVINGHQQFDYLQKMQERINSFIIQHSRIT 153
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E+++K + D I+ +A D G++D V
Sbjct: 154 EEQLKKLMFATGELAQDIGTILIGQDAVDIGLIDAV 189
>gi|219669156|ref|YP_002459591.1| peptidase S14 ClpP [Desulfitobacterium hafniense DCB-2]
gi|219539416|gb|ACL21155.1| peptidase S14 ClpP [Desulfitobacterium hafniense DCB-2]
Length = 230
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL +E + I L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 59 EHVIPQLFAVEQNPKVEGILLILNTAGGDVEAGLAISELVSSLSKPSVSIVLGGGHSIGI 118
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + ++ F P + LH G + + + K++ R+N +++ T
Sbjct: 119 PIAVSCDR--SFIAPTGTMTLHPIRYT--GLVINGHQQFDYLQKMQERINSFIIQHSQIT 174
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E+++K + D I+ +A D G++D V
Sbjct: 175 EEQLKKLMFATGELAQDIGTILIGQDAVDIGLIDAV 210
>gi|239928540|ref|ZP_04685493.1| ATP-dependent Clp protease proteolytic subunit [Streptomyces
ghanaensis ATCC 14672]
Length = 45
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 26/38 (68%)
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+ + +++ + ++RD I++A +A +G++D+++ +R
Sbjct: 1 HSTRPIDKIREDIERDKILTAEDALQYGLIDQIITTRK 38
>gi|188589517|ref|YP_001920628.1| Clp protease [Clostridium botulinum E3 str. Alaska E43]
gi|188499798|gb|ACD52934.1| Clp protease family protein [Clostridium botulinum E3 str. Alaska
E43]
Length = 232
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + K + + +N+ GG V AG+AI + ++ + P + G S+G
Sbjct: 66 EHIIPQLIDLEQNDNVKGVLIVLNTVGGDVEAGLAIAEMIRSMSKPTVSIVTGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + + K++ R+NE +
Sbjct: 126 PLATASD--YSFITPSATMIVHPVR--MNGFIIGVAQTFEYFKKMQERINEFITRTSHIK 181
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
EE+EK + D I+ +A + G++D+V
Sbjct: 182 EEELEKFMLQTNELLNDVGTILIGKQAVECGLIDEV 217
>gi|251780299|ref|ZP_04823219.1| Clp protease family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084614|gb|EES50504.1| Clp protease family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 232
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 39/156 (25%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + K + + +N+ GG V AG+AI + ++ + P + G S+G
Sbjct: 66 EHIIPQLIDLEQNDNVKGVLIVLNTVGGDVEAGLAIAEMIRSMSKPTVSIVTGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + + K++ R+NE +
Sbjct: 126 PLATASD--YSFITPSATMIVHPVR--MNGFIIGVAQTFEYFKKMQERINEFITRTSHIK 181
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
EE+EK + D I+ +A + G++D+V
Sbjct: 182 EEELEKFMLQTNELLNDVGTILIGKQAVECGLIDEV 217
>gi|170721816|ref|YP_001749504.1| peptidase S14 ClpP [Pseudomonas putida W619]
gi|169759819|gb|ACA73135.1| peptidase S14 ClpP [Pseudomonas putida W619]
Length = 183
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + L I + GG + G +Y+ ++ + P
Sbjct: 4 HIIHFTGPINSSTCGNLIS-TCSKVMQQGADLLQLNIATMGGECSYGFTLYNFLRALPVP 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE A+ + + + + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGEHRTACAMSKFLFHPFHWTLHGAVDHARMAEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCGKTYE--EVEKTLDRD-HIMSASEACDWGVVDKV 204
R +I + + E +V++ L D I+ EA G++ V
Sbjct: 123 RLYAQIVAERTAGSAEVLDVQRYLMADPRILDPQEALGSGLIHAV 167
>gi|195650143|gb|ACG44539.1| hypothetical protein [Zea mays]
Length = 95
Score = 56.2 bits (134), Expect = 3e-06, Method: Composition-based stats.
Identities = 19/79 (24%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIK-RRLNEIYVKNCGKTYEEVEKTLDRDHI 189
P A D+ +H I+ +++++++ G+ + V++ +RD
Sbjct: 16 PCAACRADARLSAQHFHHCDVPKHRSHIMHDHLQKVDKMFAAFTGQLLDMVQQWTERDQF 75
Query: 190 MSASEACDWGVVDKVLMSR 208
MS+SEA D+G++D +L +R
Sbjct: 76 MSSSEAMDFGLLDALLETR 94
>gi|26989985|ref|NP_745410.1| Clp protease, putative [Pseudomonas putida KT2440]
gi|24984904|gb|AAN68874.1|AE016519_7 clp protease, putative [Pseudomonas putida KT2440]
Length = 198
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 62/165 (37%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + L I + GG + G +Y+ ++ +
Sbjct: 19 HIIHFTGPINSSTCGNLIT-TCSRALQQGAELLQLNIATMGGECSYGFTLYNFLRALPVE 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE+ + + S S + +A +
Sbjct: 78 VHTHNLGTVESMGNILFLAGERRTACSFSKFLFHPFHWTLHGSVDHSRMSEYAMSLDYDL 137
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I++ EA + G++ ++
Sbjct: 138 RLYAQIVAERTKGAAEVLDVPRYLMAYPRILAPREALENGMIHEI 182
>gi|160890235|ref|ZP_02071238.1| hypothetical protein BACUNI_02675 [Bacteroides uniformis ATCC 8492]
gi|156859967|gb|EDO53398.1| hypothetical protein BACUNI_02675 [Bacteroides uniformis ATCC 8492]
Length = 372
Score = 55.8 bits (133), Expect = 4e-06, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 31/60 (51%)
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+++ + I + + Y+ GK+ +++ ++ + M A+EA +WG +DK++
Sbjct: 113 DTIKELQNKKKSAEAIDLMIAQKYINRSGKSLKDIITLMEEERWMPAAEAKEWGFIDKII 172
>gi|147677625|ref|YP_001211840.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|146273722|dbj|BAF59471.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 286
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + I + +N+ GG V AG+AI + + I P + +G S+G
Sbjct: 102 EHVIPQLVALEQAPEVEGILIVLNTVGGDVEAGLAIAEVIASISKPTVSVVLGGGHSIGV 161
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + A + I +G + + + + K++ R+ V++ +
Sbjct: 162 PIAVGAQYSFIAATASMTI----HPIRLNGLVIGVPQTYEYLDKMQDRVVRFVVEHSKIS 217
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ + + RD ++ EA + G++D V
Sbjct: 218 EEKFRELMFRTGELARDIGTVLIGREAVEVGLIDAV 253
>gi|313618496|gb|EFR90497.1| peptidase S14, ClpP [Listeria innocua FSL S4-378]
Length = 132
Score = 55.4 bits (132), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 35/71 (49%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEA 195
++H P+ G D++R + + ++K + Y G + ++ +D + M+A++A
Sbjct: 1 MIHNPATITMGDHEDMKRAIEMLDEVKESIINAYEIKTGVSRIKLSHLMDAETWMNANKA 60
Query: 196 CDWGVVDKVLM 206
+ G D VL
Sbjct: 61 IELGFADDVLK 71
>gi|194397675|ref|YP_002037393.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae G54]
gi|194357342|gb|ACF55790.1| ATP-dependent Clp protease proteolytic subunit [Streptococcus
pneumoniae G54]
Length = 43
Score = 55.0 bits (131), Expect = 6e-06, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRI 209
+N ++ E+V +RD+ MSA E ++G +D+++ +
Sbjct: 1 MAENSXQSMEKVHADAERDNWMSAQETLEYGFIDEIMANNS 41
>gi|167033633|ref|YP_001668864.1| peptidase S14 ClpP [Pseudomonas putida GB-1]
gi|166860121|gb|ABY98528.1| peptidase S14 ClpP [Pseudomonas putida GB-1]
Length = 183
Score = 55.0 bits (131), Expect = 7e-06, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 62/165 (37%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + + L I + GG + G +Y+ ++ +
Sbjct: 4 HIIHFTGPINSSTCGNLIS-TCSRALQQGAEVLQLNIATMGGECSYGFTLYNFLRALPVE 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE+ + + S S + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGERRTACSFSKFLFHPFHWTLHGSVDHSRMAEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I+ EA + G++D +
Sbjct: 123 RLYAQIVTERTEGAAEVLDVPRYLMAYPRILGPREAMENGLIDAI 167
>gi|104782139|ref|YP_608637.1| Clp protease (protease subunit) [Pseudomonas entomophila L48]
gi|95111126|emb|CAK15846.1| putative clp protease (protease subunit) [Pseudomonas entomophila
L48]
Length = 183
Score = 54.6 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 56/165 (33%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + L I + GG + G +Y+ + + P
Sbjct: 4 HIIHYTGPINSSTCGNLI-NTCSRALQQGADLLQLNIATMGGECSYGFTLYNFLLSLPVP 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AG A + S + + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGSHRTACACSKFLFHPFHWTLHGSVDHARMAEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I+ EA G++ +
Sbjct: 123 RLYAQIVAERTAGAVEALDVPRYLMAHPRILDPQEALACGLIHAI 167
>gi|126698922|ref|YP_001087819.1| translocation-enhancing protein TepA [Clostridium difficile 630]
gi|254974868|ref|ZP_05271340.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-66c26]
gi|255092255|ref|ZP_05321733.1| translocation-enhancing protein TepA [Clostridium difficile CIP
107932]
gi|255100344|ref|ZP_05329321.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-63q42]
gi|255306281|ref|ZP_05350452.1| translocation-enhancing protein TepA [Clostridium difficile ATCC
43255]
gi|255313995|ref|ZP_05355578.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-76w55]
gi|255516675|ref|ZP_05384351.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-97b34]
gi|255649774|ref|ZP_05396676.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-37x79]
gi|260682931|ref|YP_003214216.1| translocation-enhancing protein TepA [Clostridium difficile CD196]
gi|260686529|ref|YP_003217662.1| translocation-enhancing protein TepA [Clostridium difficile R20291]
gi|306519879|ref|ZP_07406226.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-32g58]
gi|115250359|emb|CAJ68181.1| Protein export-enhancing factor [Clostridium difficile]
gi|260209094|emb|CBA62253.1| translocation-enhancing protein TepA [Clostridium difficile CD196]
gi|260212545|emb|CBE03509.1| translocation-enhancing protein TepA [Clostridium difficile R20291]
Length = 244
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 46 FVTGQIEDHMATL-ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + I L +E N K + + +N+ GG + AG+AI + + +
Sbjct: 57 FIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAELLNSTSKKVV 116
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T +G + S+G L +AG+ F P A +++H +G I + K++ R
Sbjct: 117 TLVLGGSHSIGVPLATAGD--YSFIAPTATMIIHPVR--TTGLVIGINETFEYFKKMQDR 172
Query: 165 LNEIYVKNCGKTYEEVEKTL-DRD-------HIMSASEACDWGVVDKV 204
+ + ++ + +EK + ++D ++ EA D+G++D+V
Sbjct: 173 IIQFIIRTSNIKKDVLEKLMHEKDELVSDVGSVLIGKEAVDYGLIDEV 220
>gi|294673677|ref|YP_003574293.1| putative Clp protease [Prevotella ruminicola 23]
gi|294473420|gb|ADE82809.1| putative Clp protease [Prevotella ruminicola 23]
Length = 365
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 18/168 (10%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
FV G D A + L +++ E+++ I+S GG + ++I+ + ++
Sbjct: 17 FVGGY--DFDADYVDYVL----SKHKDTEVNVLIDSLGGQSSTALSIFSAFKLH-GNVNV 69
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ----------ASDIERHA 155
+G AS + + S G K + ++ G F ++IE
Sbjct: 70 HFVGMNAS-AATIASLGAKHITMDSSAMYLVHKCSVGFFEWGQLNSDGLQALIANIEHQK 128
Query: 156 QDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
D+ K+ + ++Y C K E + + ++A EA +WG VD+
Sbjct: 129 ADLDKLDANIAQMYATRCKKEPEALLALMKEGGWLTAKEALEWGFVDE 176
>gi|255655334|ref|ZP_05400743.1| translocation-enhancing protein TepA [Clostridium difficile
QCD-23m63]
Length = 244
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 46 FVTGQIEDHMATL-ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + I L +E N K + + +N+ GG + AG+AI + + +
Sbjct: 57 FIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAELLNSTSKKVV 116
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T +G + S+G L +AG+ F P A +++H +G I + K++ R
Sbjct: 117 TLVLGGSHSIGVPLATAGD--YSFIAPTATMIIHPVR--TTGLVIGINETFEYFKKMQDR 172
Query: 165 LNEIYVKNCGKTYEEVEKTL-DRD-------HIMSASEACDWGVVDKV 204
+ + ++ + +EK + ++D ++ EA D+G++D+V
Sbjct: 173 IIQFIIRTSNIKKDVLEKLMHEKDELVSDVGSVLIGKEAVDYGLIDEV 220
>gi|302392320|ref|YP_003828140.1| peptidase S49 [Acetohalobium arabaticum DSM 5501]
gi|302204397|gb|ADL13075.1| peptidase S49 [Acetohalobium arabaticum DSM 5501]
Length = 282
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/177 (19%), Positives = 72/177 (40%), Gaps = 21/177 (11%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E K + + +N+ GG + AG+AI + + + P + +G S+G
Sbjct: 83 EHLIPQLVAVEQNPKVKGVIITLNTVGGDIEAGLAISEMLSSLSKPTVSLVLGGGHSIGG 142
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A +K I +G+ + + + K++ R+ ++ +
Sbjct: 143 PIAVATDKSFIAETATMTI----HPIRLTGKVIGVPQTYDYLDKMQDRVINFVSRHSNIS 198
Query: 177 YEEVEKTLDRD--------HIMSASEACDWGVVDKV---------LMSRIDIEEKSK 216
E+ + R ++ EA D G++D+V L +ID EE +K
Sbjct: 199 NEDFRNLMFRTGELVRDVGTVLIGEEAVDKGMIDEVGGLSQAIKALKEKIDAEEDNK 255
>gi|296451320|ref|ZP_06893060.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296880328|ref|ZP_06904291.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|296259926|gb|EFH06781.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296428569|gb|EFH14453.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
Length = 252
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/168 (22%), Positives = 76/168 (45%), Gaps = 13/168 (7%)
Query: 46 FVTGQIEDHMATL-ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + I L +E N K + + +N+ GG + AG+AI + + +
Sbjct: 65 FIGNPQKKATKYEHIIPMLYSIEESNDVKGVLVVLNTVGGDIEAGLAIAELLNSTSKKVV 124
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T +G + S+G L +AG+ F P A +++H +G I + K++ R
Sbjct: 125 TLVLGGSHSIGVPLATAGD--YSFIAPTATMIIHPVR--TTGLVIGINETFEYFKKMQDR 180
Query: 165 LNEIYVKNCGKTYEEVEKTL-DRD-------HIMSASEACDWGVVDKV 204
+ + ++ + +EK + ++D ++ EA D+G++D+V
Sbjct: 181 IIQFIIRTSNIKKDVLEKLMHEKDELVSDVGSVLIGKEAVDYGLIDEV 228
>gi|295696208|ref|YP_003589446.1| peptidase S14 ClpP [Bacillus tusciae DSM 2912]
gi|295411810|gb|ADG06302.1| peptidase S14 ClpP [Bacillus tusciae DSM 2912]
Length = 257
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + K + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 76 EHVIPQLVAAEQNDKVKGVLIVLNTVGGDVEAGLAIAEMIATLTKPTVTLVLGGGHSIGV 135
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ AG+ I +G + + +++ R+ V + +
Sbjct: 136 PIAVAGQYSFIAESATMTI----HPIRLTGMVIGAPASWEYLERMQERVVRFVVDHSKIS 191
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ + + RD + +A +G++D++
Sbjct: 192 EAQFRELMMKTGELARDIGTTVVGKDAVRYGLIDEI 227
>gi|313498767|gb|ADR60133.1| Clp protease, putative [Pseudomonas putida BIRD-1]
Length = 183
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + L I + GG + G +Y+ ++ +
Sbjct: 4 HIIHFTGPINSSTCGNLIT-TCSRALQQGAELLQLNIATMGGECSYGFTLYNFLRALPVE 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE+ + + S S + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGERRTACSFSKFLFHPFHWTLHGSVDHSRMSEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I++ EA + G++ +
Sbjct: 123 RLYAQIVAERTKGAAEVLDVPRYLMAYPRILAPREALENGMIHAI 167
>gi|148547710|ref|YP_001267812.1| peptidase S14, ClpP [Pseudomonas putida F1]
gi|148511768|gb|ABQ78628.1| peptidase S14, ClpP [Pseudomonas putida F1]
Length = 183
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + L I + GG + G +Y+ ++ +
Sbjct: 4 HIIHFTGPINSSTCGNLIT-TCSRALQQGAELLQLNIATMGGECSYGFTLYNFLRGLPVE 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AGE+ + + S S + +A +
Sbjct: 63 VHTHNLGTVESMGNILFLAGERRTACSFSKFLFHPFHWTLHGSVDHSRMSEYAMSLDYDL 122
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I++ EA + G++ +
Sbjct: 123 RLYAQIVAERTKGAAEVLDVPRYLMAYPRILAPREALENGMIHAI 167
>gi|298682279|gb|ADI95342.1| putative Clp protease [Pseudomonas putida]
Length = 198
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/165 (16%), Positives = 60/165 (36%), Gaps = 4/165 (2%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
I+ TG I + + + + L I + GG + G +Y+ ++ +
Sbjct: 19 HIIHFTGPINSSTCGNLIT-TCSRALQQGAELLQLNIATMGGECSYGFTLYNFLRGLPVE 77
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ T +G SMG++L AG + + + S S + +A +
Sbjct: 78 VHTHNLGTVESMGNILFLAGARRTACSFSKFLFHPFHWTLHGSVDHSRMSEYAMSLDYDL 137
Query: 163 RRLNEIYVKNCGKTYEEV---EKTLDRDHIMSASEACDWGVVDKV 204
R +I + E + + I++ EA + G++ +
Sbjct: 138 RLYAQIVAERTKGAAEVLDVPRYLMAYPRILAPREALENGMIHAI 182
>gi|251797382|ref|YP_003012113.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2]
gi|247545008|gb|ACT02027.1| peptidase S14 ClpP [Paenibacillus sp. JDR-2]
Length = 247
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + + I + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 69 EHLIPQLVAAEQNSKIEGILIVLNTVGGDVEAGLAIAEMISSLSKPTVTLVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ AG A I +G + + + + K++ R+ + + T
Sbjct: 129 PIAVAGNMSFIAATATMTI----HPIRLNGLVIGVPQTFEYLDKMQERILKFVTMHSNVT 184
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + S+A +G++D V
Sbjct: 185 EEKFKELMFKTGELTRDIGTTVIGSDAVKYGLIDAV 220
>gi|225223|prf||1211235BE ORF 74B
Length = 74
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 51/72 (70%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
+++L E+ K++ L+INSPGG V G+AIYDTMQF++P + T CMG AASMGS +L G
Sbjct: 1 MVYLSIEDETKDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGG 60
Query: 123 EKGMRFALPNAR 134
E R A P+A
Sbjct: 61 EITKRLAFPHAW 72
>gi|153941528|ref|YP_001391156.1| putative Clp protease [Clostridium botulinum F str. Langeland]
gi|152937424|gb|ABS42922.1| putative Clp protease [Clostridium botulinum F str. Langeland]
gi|295319197|gb|ADF99574.1| putative Clp protease [Clostridium botulinum F str. 230613]
Length = 247
Score = 52.7 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 40/190 (21%), Positives = 78/190 (41%), Gaps = 22/190 (11%)
Query: 40 LKERI-----VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
K R ++V G+I D LE + I++YINS GG VT
Sbjct: 7 FKNRTDNNIDIYVYGEIIGGSEKWDESNVTFNDFKDNLEGLTGNETINMYINSVGGSVTT 66
Query: 89 GMAIYDTMQFIKPP---ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
I +Q K I+ G AS S L + +A ++ +++H P
Sbjct: 67 TQGIIAMLQRAKEKGVTINATIDGIGASCASFLPLVAD--NVYAYKSSLLMVHHPYTLCI 124
Query: 146 GQASDIERHAQDIVKI-KRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACD-WGVV 201
G ++++ + KI + +Y+ G T ++++ +D++ ++A E + + +
Sbjct: 125 GNVDELQKQIDLLNKIENSVMMPLYLNKAKEGITKDKIKNLVDKETWLNAKEMSEIFNI- 183
Query: 202 DKVLMSRIDI 211
++L D+
Sbjct: 184 -EILEDDKDL 192
>gi|315648078|ref|ZP_07901179.1| peptidase S14 ClpP [Paenibacillus vortex V453]
gi|315276724|gb|EFU40067.1| peptidase S14 ClpP [Paenibacillus vortex V453]
Length = 258
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 80 EHMIPQLVAAEQNPRIEGLLIILNTVGGDVEAGLAIAEMIASLSKPTVTVVIGGGHSIGV 139
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + I SG + + + + K++ R+ + G T
Sbjct: 140 PIAVAADHSIIAESATMTI----HPIRMSGLVIGVPQTFEYMEKMQERVVRFVTSHSGIT 195
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + + +RD +S +A +G++D+V
Sbjct: 196 EERFKNLMFATGELNRDIGTAVSGVDAVKYGLMDEV 231
>gi|83589919|ref|YP_429928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
gi|83572833|gb|ABC19385.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 259
Score = 52.7 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + K + + +N+ GG V AG+AI + + + P+ + +G S+G
Sbjct: 83 EHIIPQLVAVEQDPSIKGLLVVLNTVGGDVEAGLAIAEMLVSMSKPVVSLVLGGGHSIGV 142
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A I +G + + + + K++ R+ V++ +
Sbjct: 143 PISVAANYSFIAETATMTI----HPIRLTGLVIGVPQTYEYLDKMQDRVIRFIVEHANIS 198
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+E+ + + RD I+ +A G++D+V
Sbjct: 199 EQELRRLMFQTGELARDIGTILVGQDAVRVGLIDEV 234
>gi|260893129|ref|YP_003239226.1| peptidase S14 ClpP [Ammonifex degensii KC4]
gi|260865270|gb|ACX52376.1| peptidase S14 ClpP [Ammonifex degensii KC4]
Length = 234
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + I + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 57 EHVLPQLVALEQHPEIEGILVILNTVGGDVEAGLAIAEMLASLSKPTVSLVLGGGHSIGV 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + I +GQ + + + + K++ R+ + V++
Sbjct: 117 PIAVAARYSFITETASMTI----HPIRLTGQVIGVPQTWEYLEKMQDRVIKFVVRHSRIE 172
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKVLMSRIDIEE 213
+ + RD ++ EA D G++D+V R + +
Sbjct: 173 EWRFRELMFRSGELARDIGTVLVGREAVDCGLIDEVGGVRKALAK 217
>gi|167748876|ref|ZP_02421003.1| hypothetical protein ANACAC_03650 [Anaerostipes caccae DSM 14662]
gi|317470284|ref|ZP_07929678.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
gi|167651846|gb|EDR95975.1| hypothetical protein ANACAC_03650 [Anaerostipes caccae DSM 14662]
gi|316902257|gb|EFV24177.1| Clp protease [Anaerostipes sp. 3_2_56FAA]
Length = 239
Score = 52.3 bits (124), Expect = 4e-05, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L E + K I + +N+ GG V G+A+ + + + P T +G + S+G
Sbjct: 68 EHMIPALAKAEYSDDIKGILILLNTVGGDVECGLALAEMIASLSKPTVTLVLGGSHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F + +A +++H G + + ++I KI+ R+ +
Sbjct: 128 PLAVSSD--YSFIVKSATMMIHPVRSS--GTFIGVLQSYRNIEKIQDRITRFISDHSDIA 183
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
++VE+ + D ++ +A + G+++++
Sbjct: 184 EDKVEELMLHIGEQVKDAGTVLEGEQAVELGLINEI 219
>gi|253573584|ref|ZP_04850927.1| peptidase S14 ClpP [Paenibacillus sp. oral taxon 786 str. D14]
gi|251847112|gb|EES75117.1| peptidase S14 ClpP [Paenibacillus sp. oral taxon 786 str. D14]
Length = 253
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 74 EHVIPQLVAAEQNPRIEGLLIILNTVGGDVEAGLAIAEMIASLSKPTVTVVIGGGHSIGV 133
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + I +G + + + I K++ R+ + +
Sbjct: 134 PIAVASDYSLIAESATMTI----HPIRMTGLVIGVPQTFEYIEKMQERVVRFVTTHSKIS 189
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ ++ + +RD + S+A +G++D +
Sbjct: 190 EEKFKELMFKTGELNRDIGTAVGGSDAVKYGLIDAI 225
>gi|311030070|ref|ZP_07708160.1| protein export-enhancing factor [Bacillus sp. m3-13]
Length = 252
Score = 52.3 bits (124), Expect = 5e-05, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 72 EHVIPQIVAIEQNPNIEGLLVILNTVGGDVEAGLAISEMLASLSKPTVSLVLGGGHSIGV 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ KN G
Sbjct: 132 PIAVSCDYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQDRVINFVTKNSGIP 187
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + ++A ++G++D+V
Sbjct: 188 EEKFKELMLSKGNLTRDIGTNVVGADAVEYGLIDQV 223
>gi|325263865|ref|ZP_08130598.1| Clp protease [Clostridium sp. D5]
gi|324030903|gb|EGB92185.1| Clp protease [Clostridium sp. D5]
Length = 242
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L E + + I + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 62 EHLIPRLAEAEDNDDIEGILILLNTLGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 121
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ K + R+ + T
Sbjct: 122 PLAVSAD--YSFIVPSGTMIVHPVRST--GMFIGVIQSYRNMEKTQDRITRFIASHSNIT 177
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +EK + D ++ EA G++D+V
Sbjct: 178 QERLEKLMLDSSQLVKDVGTLLEGEEAVKEGLIDEV 213
>gi|125973612|ref|YP_001037522.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|256003432|ref|ZP_05428423.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360]
gi|281417817|ref|ZP_06248837.1| peptidase S14 ClpP [Clostridium thermocellum JW20]
gi|125713837|gb|ABN52329.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
thermocellum ATCC 27405]
gi|255992722|gb|EEU02813.1| peptidase S14 ClpP [Clostridium thermocellum DSM 2360]
gi|281409219|gb|EFB39477.1| peptidase S14 ClpP [Clostridium thermocellum JW20]
gi|316940146|gb|ADU74180.1| peptidase S14 ClpP [Clostridium thermocellum DSM 1313]
Length = 257
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + L +N+ GG V AG+AI + + + P + +G
Sbjct: 70 EHVIPQLVAIEESEEIDGLLLILNTVGGDVEAGLAIAEMIASMSKPTVSLVLG--GGHSI 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F P+A + +H G + + + +++ R+ + KN +
Sbjct: 128 GVPMAVATNYSFIAPSATMTIHPIRLN--GMVIGVPQTYEYFDRMQDRVVQFVTKNSNIS 185
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
E + + D I+ EA +G++D+
Sbjct: 186 KERFRELMLKTGELANDVGTILFGEEAVKYGLIDE 220
>gi|289578373|ref|YP_003477000.1| peptidase S14 ClpP [Thermoanaerobacter italicus Ab9]
gi|297544650|ref|YP_003676952.1| peptidase S14 ClpP [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|289528086|gb|ADD02438.1| peptidase S14 ClpP [Thermoanaerobacter italicus Ab9]
gi|296842425|gb|ADH60941.1| peptidase S14 ClpP [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 233
Score = 51.9 bits (123), Expect = 5e-05, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 62 EHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGV 121
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + +P+A + +H +G + + K++ R+ E V+N
Sbjct: 122 PL--AVSANYSYIVPSATMTIHPIR--MTGMVVGVPQTFDYFNKMQDRIVEFIVRNSKIK 177
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + + D I+ EA D+G++D++
Sbjct: 178 RETFMELMLKTGELANDIGTILVGKEAVDYGLIDEI 213
>gi|212639505|ref|YP_002316025.1| protease subunit of ATP-dependent Clp protease [Anoxybacillus
flavithermus WK1]
gi|212560985|gb|ACJ34040.1| Protease subunit of ATP-dependent Clp protease [Anoxybacillus
flavithermus WK1]
Length = 237
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 61 EHLIPQIVAIEQNPNIEGLLVVLNTVGGDVEAGLAIAEMLASMSKPTVSIVLGGGHSIGV 120
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ VK+ +
Sbjct: 121 PIAVSCDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVNFVVKHSNIS 176
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E++++ + RD + ++A +G++D+V
Sbjct: 177 EEKLKELMFSKGNLTRDIGTNVVGTDAVKYGLIDEV 212
>gi|167040270|ref|YP_001663255.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514]
gi|256750804|ref|ZP_05491689.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus CCSD1]
gi|300914354|ref|ZP_07131670.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561]
gi|307724410|ref|YP_003904161.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513]
gi|166854510|gb|ABY92919.1| peptidase S14, ClpP [Thermoanaerobacter sp. X514]
gi|256750387|gb|EEU63406.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus CCSD1]
gi|300889289|gb|EFK84435.1| peptidase S14 ClpP [Thermoanaerobacter sp. X561]
gi|307581471|gb|ADN54870.1| peptidase S14 ClpP [Thermoanaerobacter sp. X513]
Length = 238
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 63 EHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGV 122
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + +P+A + +H +G + + K++ R+ E V+N
Sbjct: 123 PL--AVSANYSYIVPSATMTIHPIR--MTGLIVGVPQTFDYFNKMQDRIVEFIVRNSKIK 178
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ K + D I+ EA D+G++D++
Sbjct: 179 RDTFMKLMLKTGELANDIGTILVGKEAVDYGLIDEI 214
>gi|319902220|ref|YP_004161948.1| peptidase S14 ClpP [Bacteroides helcogenes P 36-108]
gi|319417251|gb|ADV44362.1| peptidase S14 ClpP [Bacteroides helcogenes P 36-108]
Length = 378
Score = 51.9 bits (123), Expect = 6e-05, Method: Composition-based stats.
Identities = 38/190 (20%), Positives = 70/190 (36%), Gaps = 21/190 (11%)
Query: 40 LKERIVFVTGQIEDH--MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+ E I+ + G I+ + I L + L + S GG V +AI + +
Sbjct: 28 MNETIITLFGTIDRYCYGKNYIKYFLDK----AQGNPVRLKVTSYGGDVAEAVAISNLLA 83
Query: 98 FIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQ----------PSGGFSGQ 147
++ +G AS + + G + + + +
Sbjct: 84 EH-GDVTVEFIGFNASAATWMAF-GARSIEIHEDAMWLAHKSSIGVDIYGSLNVDQLEEK 141
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV--- 204
++E ++ I + + Y C KT ++V + M +SEA DWG VDKV
Sbjct: 142 IRELENARKNAEAIDLMIAKKYADRCKKTVKDVIGLMSESRWMPSSEAKDWGFVDKVIPG 201
Query: 205 LMSRIDIEEK 214
+ RI I ++
Sbjct: 202 INKRIQITDE 211
>gi|323701887|ref|ZP_08113557.1| peptidase S14 ClpP [Desulfotomaculum nigrificans DSM 574]
gi|323533191|gb|EGB23060.1| peptidase S14 ClpP [Desulfotomaculum nigrificans DSM 574]
Length = 272
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 95 EHIIPQLVGIEQAEDIEGVLLILNTVGGDVEAGLAIAEVIATMTKPTVSLVLGGGHSIGV 154
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F P A + +H G + + + K++ R+ ++ +
Sbjct: 155 PI--AVSSNYSFIAPTASMTIHPIRLN--GLVIGVPQTYDYLDKMQDRVIRFVTEHSKIS 210
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
++ + RD ++ +A ++G++D+V
Sbjct: 211 EQKFRDLMFKTGELARDIGTVVIGKDAVEYGLIDEV 246
>gi|296132914|ref|YP_003640161.1| peptidase S49 [Thermincola sp. JR]
gi|296031492|gb|ADG82260.1| peptidase S49 [Thermincola potens JR]
Length = 270
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 93 EHIIPQLVALEENPEIEGVLVVLNTIGGDVEAGLAIAEMITSMSKPTVSLVLGGGHSIGV 152
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + +G + + + + K++ R+ +K+ +
Sbjct: 153 PIAVATDYSFIAETAGMTV----HPIRLTGLVIGVPQTYEYLDKMQDRVVNFIIKHSKIS 208
Query: 177 YEEVEKTL------DRDH--IMSASEACDWGVVDKV 204
++ + + RD ++ +A D G++D+V
Sbjct: 209 EAKLRELMFRTGELARDIGAVLIGKDAVDVGLIDEV 244
>gi|167037609|ref|YP_001665187.1| peptidase S14, ClpP [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|307264928|ref|ZP_07546490.1| peptidase S14 ClpP [Thermoanaerobacter wiegelii Rt8.B1]
gi|320116024|ref|YP_004186183.1| peptidase S14 ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326389423|ref|ZP_08210990.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus JW 200]
gi|166856443|gb|ABY94851.1| peptidase S14, ClpP [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|306920186|gb|EFN50398.1| peptidase S14 ClpP [Thermoanaerobacter wiegelii Rt8.B1]
gi|319929115|gb|ADV79800.1| peptidase S14 ClpP [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325994428|gb|EGD52853.1| peptidase S14 ClpP [Thermoanaerobacter ethanolicus JW 200]
Length = 238
Score = 51.6 bits (122), Expect = 7e-05, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 63 EHIIPQLVAIEENPNIKGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGV 122
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + +P+A + +H +G + + K++ R+ E V+N
Sbjct: 123 PL--AVSANYSYIVPSATMTIHPIR--MTGLIVGVPQTFDYFNKMQDRIVEFIVRNSKIK 178
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ K + D I+ EA D+G++D++
Sbjct: 179 RDTFMKLMLKTGELANDIGTILVGKEAVDYGLIDEI 214
>gi|147770313|emb|CAN66990.1| hypothetical protein VITISV_005166 [Vitis vinifera]
Length = 176
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 21/37 (56%)
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ G+++E++ + DRD +S EA ++ D V+
Sbjct: 119 LSYHIGQSFEKINQNTDRDFFISTKEAKEYRFTDGVI 155
>gi|108708098|gb|ABF95893.1| ATP-dependent Clp protease proteolytic subunit, putative, expressed
[Oryza sativa Japonica Group]
Length = 230
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 9/72 (12%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINS---------PGGVVTAGMAIY 93
RIV++ + + L+ AQL++LE N ++ + +YINS P G+ + G AIY
Sbjct: 139 RIVYIGMPLVPAVTELVVAQLMYLEWMNSKEPVYIYINSTGTARDDGEPVGMESEGFAIY 198
Query: 94 DTMQFIKPPIST 105
D M +K +
Sbjct: 199 DAMMRMKTEVHI 210
>gi|255524218|ref|ZP_05391177.1| peptidase S14 ClpP [Clostridium carboxidivorans P7]
gi|296185339|ref|ZP_06853749.1| Clp protease [Clostridium carboxidivorans P7]
gi|255512043|gb|EET88324.1| peptidase S14 ClpP [Clostridium carboxidivorans P7]
gi|296050173|gb|EFG89597.1| Clp protease [Clostridium carboxidivorans P7]
Length = 229
Score = 51.2 bits (121), Expect = 9e-05, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 61 EHVIPQLINIENDQNIEGLLIVLNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 120
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + + K++ R+ E V+
Sbjct: 121 PLATAAD--YSFISPSATMIIHPIR--MNGLVIGVPQTFEYFNKMQERITEFIVRTSKIK 176
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E+V+K + D I+ +A + G++D+V
Sbjct: 177 REQVQKLMVQTDELLNDMGTILIGEQAVEAGLIDQV 212
>gi|34419242|ref|NP_899255.1| ClpP [Vibrio phage KVP40]
gi|34332923|gb|AAQ64078.1| ClpP [Vibrio phage KVP40]
Length = 239
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 8/152 (5%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP-PIS 104
++ G IE+ Q+L +E + L++N+PGG A I D + K +
Sbjct: 21 YINGPIEEPNDYEEMLQILHTASETDL--VYLHLNTPGGNFAAACQICDAIMQSKAGAVI 78
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G+ S G+++ A P A + H SGG G+ D + A+ + R
Sbjct: 79 ACAEGEVCSAGTMIFLACNGW--HVSPFATFMFHTSSGGQIGKMPDTLKQAKAHEEHLNR 136
Query: 165 LNEIYVKNCGKTYEEVEKTLDR--DHIMSASE 194
+ + + +E+++ ++ D ++ E
Sbjct: 137 VCGLLYEPF-FDADEIDEIINHNQDLWLTPDE 167
>gi|28210969|ref|NP_781913.1| ATP-dependent Clp protease proteolytic subunit [Clostridium tetani
E88]
gi|28203408|gb|AAO35850.1| ATP-dependent clp protease proteolytic subunit [Clostridium tetani
E88]
Length = 255
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/156 (21%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ ++ ++ + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 85 EHVIPQLVNIQMDDNIEGVLVILNTVGGDVEAGLAIAEMIGSLGKPTVSLVIGGGHSIGV 144
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A F P A +++H +G + + + K++ R+ E V+
Sbjct: 145 PLATAS--NYSFISPTATMIIHPIR--MNGLILGVPQTFEYFDKMQDRIIEFIVRTSKMD 200
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E ++ + D I+ EA D G++D+V
Sbjct: 201 KETIKDMMIKTDNLLNDMGTILIGKEAVDCGLIDEV 236
>gi|182417555|ref|ZP_02948881.1| Clp protease [Clostridium butyricum 5521]
gi|237668635|ref|ZP_04528619.1| Clp protease family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182378568|gb|EDT76096.1| Clp protease [Clostridium butyricum 5521]
gi|237656983|gb|EEP54539.1| Clp protease family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 241
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 38/156 (24%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 74 EHIIPQLIEIEQNDSVKGVLIVLNTVGGDVEAGLAIAEMINSMSKPTVSIVIGGGHSIGV 133
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P+A +++H +G I + + K++ R+N+ V+
Sbjct: 134 PLATSSD--FSFITPSATMIVHPVR--MNGFVIGIAQTFEYFKKMQERINDFIVRTSNIK 189
Query: 177 YEEVEK------TLDRD--HIMSASEACDWGVVDKV 204
E +EK L D ++ +A D G++D+V
Sbjct: 190 SETLEKFMLQTDDLLNDVGTMLIGKQAVDCGLIDEV 225
>gi|114566793|ref|YP_753947.1| peptidase S14, ClpP [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114337728|gb|ABI68576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 267
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+A+ + + + P + +G S+GS
Sbjct: 94 EHIIPQLVAVEENPQIKGLLVALNTVGGDVEAGLALAEMIASLSKPTVSIVLGGGHSIGS 153
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F P+A + +H G + + + + K++ R+ V++ +
Sbjct: 154 TI--AVCTNYSFIAPSATMTIHPIRLT--GLVIGVPQTYEYLDKMQDRVVRFVVEHSNIS 209
Query: 177 YEEVEK------TLDRD--HIMSASEACDWGVVDKV 204
E+ + L RD ++ +A D G++D+V
Sbjct: 210 EEKFRELMFRMGDLARDIGTVLVGKDAVDCGLIDQV 245
>gi|288556926|ref|YP_003428861.1| hypothetical protein BpOF4_19650 [Bacillus pseudofirmus OF4]
gi|288548086|gb|ADC51969.1| hypothetical protein BpOF4_19650 [Bacillus pseudofirmus OF4]
Length = 249
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + + L +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 70 EHIIPQLVAVEQNPKIEGLLLILNTVGGDVEAGLAISEMVASMSKPSVTLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A I +G + + + + K++ R+ + G +
Sbjct: 130 PIAVAANYSFIAKTATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVISFVTQQSGIS 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV------LMSRIDIEEKSK 216
E+ ++ + RD + ++A ++G++D+V L ++ + +K
Sbjct: 186 EEKFKELMLSKGNLTRDIGTNVVGTDAVEYGLIDEVGGIGSALKKLNELIDANK 239
>gi|164688506|ref|ZP_02212534.1| hypothetical protein CLOBAR_02151 [Clostridium bartlettii DSM
16795]
gi|164602919|gb|EDQ96384.1| hypothetical protein CLOBAR_02151 [Clostridium bartlettii DSM
16795]
Length = 321
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 39/185 (21%), Positives = 82/185 (44%), Gaps = 19/185 (10%)
Query: 46 FVTGQIEDHMATL-ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
FV + + L +E + K I + +N+ GG V AG+A+ + + I +
Sbjct: 135 FVGNPQKKATKYEHVIPMLYSIEEDPEIKGILIILNTVGGDVEAGLAMAELINSISKKVV 194
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T +G + S+G L +AG+ F P+A +++H +G + + K++ R
Sbjct: 195 TLVLGGSHSIGVPLATAGD--YSFIAPSATMIVHPIR--TNGLVIGVNETFEYFKKMQER 250
Query: 165 LNEIYVKNCGKTYEEVEKTL-DRD-------HIMSASEACDWGVVDKV------LMSRID 210
+NE + + EE+ + + +D ++ EA D G++++V L +
Sbjct: 251 INEFITRTSNISEEELTRLMHAKDELVSDVGSVLIGKEAVDCGLINEVGGLKESLTKLKE 310
Query: 211 IEEKS 215
+ ++
Sbjct: 311 LIKED 315
>gi|168182333|ref|ZP_02616997.1| serine protease [Clostridium botulinum Bf]
gi|182674431|gb|EDT86392.1| serine protease [Clostridium botulinum Bf]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++V G+I D LE ++ I++YINS GG VT I ++
Sbjct: 17 IYVYGEIIGGSEKWDESDVTFNDFRDNLERLTGKETINMYINSVGGSVTTTQGIIAMLKR 76
Query: 99 IKPP---ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
K I+ G AS S L + + + +++H P G ++++
Sbjct: 77 AKEKGVTINATIDGIGASCASFLPLVADNVYAYNS--SLLMVHHPYTLCIGNVDELQKQI 134
Query: 156 QDIVKI-KRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACD-WGVVDKVLMSRIDI 211
+ KI + +Y+ G T +E++ +D++ ++A E + + + ++L D+
Sbjct: 135 DLLNKIENSVMMPLYLNKAKEGITKDEIKDLVDKETWLNAKEMSEIFNI--EILEDDKDL 192
>gi|240143579|ref|ZP_04742180.1| ClpP protease family protein [Roseburia intestinalis L1-82]
gi|257204444|gb|EEV02729.1| ClpP protease family protein [Roseburia intestinalis L1-82]
Length = 419
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 50/142 (35%)
Query: 63 LLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAG 122
L L + +I++ INS GG + + I + ++ + G AAS +++
Sbjct: 69 LEDLAQVKDKAKITVRINSVGGDLYTALGICNRLKELNGDTVAVIDGIAASAATIIAMGC 128
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ + + + + + + + E Y G E++ +
Sbjct: 129 KTREIAEGALFMVHEALLTLVGNYNHKALLEVNKRLEAANKAAAETYDAATGLGTEKIRQ 188
Query: 183 TLDRDHIMSASEACDWGVVDKV 204
+ ++ + EA + G +
Sbjct: 189 IMAKETWYTGREAVENGFCTSI 210
>gi|118442934|ref|YP_878200.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|118133390|gb|ABK60434.1| ATP-dependent clp protease proteolytic subunit [Clostridium novyi
NT]
Length = 233
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 60 EHLIPQLVDIETNDSIEGVLIILNTVGGDVEAGLAIAEMINSLSKPSVSLVIGGGHSIGV 119
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P+A +++H +G + + + K++ R+ + +
Sbjct: 120 PLATSAD--YSFISPSATMIIHPIR--MNGLVLGVPQTFEYFNKMQERIIDFITRTSKMK 175
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E K + D I+ +A D+G++D+V
Sbjct: 176 NETFRKLMLQTDDLLNDMGTILIGKQAVDYGLIDEV 211
>gi|295091960|emb|CBK78067.1| Protease subunit of ATP-dependent Clp proteases [Clostridium cf.
saccharolyticum K10]
Length = 262
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L +E ++ + + IN+ GG V+ G+A+ + + + P + +G + S+G
Sbjct: 91 EHILPKLAEIEDDDQVDGMLILINTVGGDVSCGLALAEMIASLSRPTVSLVIGDSHSIGV 150
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + F +P +++H +G + I+ R+ ++
Sbjct: 151 PLAVASD--YSFIVPTGTMMIHPVR--MTGMVIGAVQTYDYFEMIQDRILSFVSEHARIA 206
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV------LMSRIDIEEKSK 216
Y++++ + +++ EA G++D+V L ++ EK K
Sbjct: 207 YDQLKGLMLNTKMLTKDLGTVLVGEEAVKEGLIDEVGGIHEALTKLNELIEKKK 260
>gi|262113741|emb|CAR95408.1| hypothetical protein [Streptococcus phage phi-m46.1]
Length = 139
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/127 (26%), Positives = 55/127 (43%), Gaps = 4/127 (3%)
Query: 43 RIVFVTGQIEDHM--ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
R + + GQI D + Q+ + +I+L+INSPGG V A IY+ + K
Sbjct: 14 RTLRIEGQIGDETWFGDEVMPQVFKNDLHAGSGDITLWINSPGGDVFAAAPIYNMLMDYK 73
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
+ G AAS S++ AG P A + + P G+ D ++ + +
Sbjct: 74 GDVHVVIDGLAASAASVISMAGA--TVSMSPVAMMRMSNPWSTSQGEVKDTQKVLEMFGE 131
Query: 161 IKRRLNE 167
IK L +
Sbjct: 132 IKESLIK 138
>gi|167630380|ref|YP_001680879.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
gi|167593120|gb|ABZ84868.1| peptidase s14, clpp [Heliobacterium modesticaldum Ice1]
Length = 255
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ LE + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 79 EHILPQLVALEQSKDIEGVLLILNTVGGDVEAGLAIAEMVASLSKPSVSIVLGGGHSIGV 138
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + M + I +G + + + K++ R+ +N T
Sbjct: 139 PIAVSADYSMIASTATMTI----HPIRLTGLVIGVPATFEYLEKMQDRVVAFVTRNSRIT 194
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ ++ + RD ++ EA ++G++D V
Sbjct: 195 PEKFKELMFKTGELTRDIGTVVVGKEAVEYGLIDAV 230
>gi|254479114|ref|ZP_05092466.1| Clp protease [Carboxydibrachium pacificum DSM 12653]
gi|214034963|gb|EEB75685.1| Clp protease [Carboxydibrachium pacificum DSM 12653]
Length = 238
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 64 EHIIPQLVAIEENPSIKGVLVLLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGV 123
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + +P+A + +H +G + + K++ R+ E V+N
Sbjct: 124 PL--AVSANYSYIVPSATMTIHPIR--MTGLVVGVPQTFDYFNKMQDRIVEFIVRNSKIK 179
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + D I+ EA D+G++D++
Sbjct: 180 RETFMSLMLKTGELANDIGTILVGKEAVDYGLIDEI 215
>gi|300854510|ref|YP_003779494.1| putative protease [Clostridium ljungdahlii DSM 13528]
gi|300434625|gb|ADK14392.1| predicted protease [Clostridium ljungdahlii DSM 13528]
Length = 221
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L+ +E + + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 54 EHVIPNLIAIENDKRVEGLLVVLNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 113
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H SG + + + K++ R+NE V+ T
Sbjct: 114 PLATASD--YSFISPSATMIIHPIR--MSGMVIGVPQTFEYFNKMQERINEFIVRTSKIT 169
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++ + + D I+ +A + G++D+V
Sbjct: 170 GEKLTELMLQTDELLNDMGTILIGKQAVEQGLIDEV 205
>gi|295399870|ref|ZP_06809851.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93]
gi|312111618|ref|YP_003989934.1| peptidase S14 ClpP [Geobacillus sp. Y4.1MC1]
gi|294978273|gb|EFG53870.1| peptidase S14 ClpP [Geobacillus thermoglucosidasius C56-YS93]
gi|311216719|gb|ADP75323.1| peptidase S14 ClpP [Geobacillus sp. Y4.1MC1]
Length = 243
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 66 EHVIPQIVAIEQNQNIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 126 PIAVSCDYSFITETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSKIT 181
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 182 EEKFKELMFSKGNLTRDIGTNVVGPDAVKYGLIDEV 217
>gi|20807828|ref|NP_622999.1| protease subunit of ATP-dependent Clp protease [Thermoanaerobacter
tengcongensis MB4]
gi|20516388|gb|AAM24603.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 239
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 65 EHIIPQLVAIEENPSIKGVLVLLNTVGGDVEAGLAIAEMIASLSKPTVSIVLGGGHSIGV 124
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + +P+A + +H +G + + K++ R+ E V+N
Sbjct: 125 PL--AVSANYSYIVPSATMTIHPIR--MTGLVVGVPQTFDYFNKMQDRIVEFIVRNSKIK 180
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + D I+ EA D+G++D++
Sbjct: 181 RETFMSLMLKTGELANDIGTILVGKEAVDYGLIDEI 216
>gi|291087633|ref|ZP_06346979.2| translocation-enhancing protein TepA [Clostridium sp. M62/1]
gi|291074513|gb|EFE11877.1| translocation-enhancing protein TepA [Clostridium sp. M62/1]
Length = 264
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/174 (18%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L +E ++ + + IN+ GG V+ G+A+ + + + P + +G + S+G
Sbjct: 93 EHILPKLAEIEDDDQVDGMLILINTVGGDVSCGLALAEMIASLSRPTVSLVIGDSHSIGV 152
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + F +P +++H +G + I+ R+ ++
Sbjct: 153 PLAVASD--YSFIVPTGTMMIHPVR--MTGMVIGAVQTYDYFEMIQDRILSFVSEHARIA 208
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV------LMSRIDIEEKSK 216
Y++++ + +++ EA G++D+V L ++ EK K
Sbjct: 209 YDQLKGLMLNTKMLTKDLGTVLVGEEAVKEGLIDEVGGIHEALTKLNELIEKKK 262
>gi|331269619|ref|YP_004396111.1| peptidase S14, ClpP [Clostridium botulinum BKT015925]
gi|329126169|gb|AEB76114.1| peptidase S14, ClpP [Clostridium botulinum BKT015925]
Length = 231
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 58 EHVIPQLVDIEMNDDIEGVLIILNTVGGDVEAGLAIAEMISSLSKPSVSLVIGGGHSIGV 117
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F P+A +++H +G + + + K++ R+ + +
Sbjct: 118 PLATCAD--YSFISPSATMIVHPIR--MNGLVLGVPQTFEYFNKMQERIIDFIKRTSKIN 173
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ + + D I+ +A D+G++D+V
Sbjct: 174 KDTLRSLMLQTDELLNDMGTILIGKQAVDYGLIDEV 209
>gi|261407921|ref|YP_003244162.1| peptidase S14 ClpP [Paenibacillus sp. Y412MC10]
gi|261284384|gb|ACX66355.1| peptidase S14 ClpP [Paenibacillus sp. Y412MC10]
Length = 258
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 80 EHMIPQLVAAEQNPRIEGLLIILNTVGGDVEAGLAIAEMIASLSKPTVTVVIGGGHSIGV 139
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + I SG + + + + K++ R+ + G T
Sbjct: 140 PIAVAADHSIIAESATMTI----HPIRMSGLVIGVPQTFEYMEKMQERVVRFVTSHSGIT 195
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ + + +RD +S ++A +G++++V
Sbjct: 196 EEQFKDLMFKTGELNRDIGTAVSGADAVKYGLMNEV 231
>gi|329929297|ref|ZP_08283050.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|328936666|gb|EGG33109.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 258
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 80 EHMIPQLVAAEQNPRIEGLLIILNTVGGDVEAGLAIAEMIASLSKPTVTVVIGGGHSIGV 139
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + I SG + + + + K++ R+ + G T
Sbjct: 140 PIAVAADHSIIAESATMTI----HPIRMSGLVIGVPQTFEYMEKMQERVVRFVTSHSGIT 195
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ + + +RD +S ++A +G++++V
Sbjct: 196 EEQFKDLMFKTGELNRDIGTAVSGTDAVKYGLMNEV 231
>gi|239826674|ref|YP_002949298.1| peptidase S14 ClpP [Geobacillus sp. WCH70]
gi|239806967|gb|ACS24032.1| peptidase S14 ClpP [Geobacillus sp. WCH70]
Length = 245
Score = 50.0 bits (118), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNQNIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 128 PIAVSCDYSFITETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSKIT 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGPDAVKYGLIDEV 219
>gi|150016096|ref|YP_001308350.1| peptidase S14, ClpP [Clostridium beijerinckii NCIMB 8052]
gi|149902561|gb|ABR33394.1| peptidase S14, ClpP [Clostridium beijerinckii NCIMB 8052]
Length = 235
Score = 49.6 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + K + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 68 EHIIPQLIDIEQNDDAKGLLIVLNTVGGDVEAGLAISEMIRSMSKPTVSIVIGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P+A +++H +G + + + K++ R+NE V+
Sbjct: 128 PLATSAD--FSFITPSATMIVHPVR--MNGFVIGVSQTFEYFKKMQERINEFIVRTSNIK 183
Query: 177 YEEVEK------TLDRD--HIMSASEACDWGVVDKV 204
+ +E+ L D ++ +A D G++D+V
Sbjct: 184 PDTLERFMLQTDDLLNDVGTMLIGKQAVDCGLIDQV 219
>gi|325171179|ref|YP_004251154.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1]
gi|323512574|gb|ADX88029.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1]
gi|323512801|gb|ADX88255.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2006_D]
gi|323513029|gb|ADX88482.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2006_C]
gi|323513254|gb|ADX88706.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2006_B]
gi|323513481|gb|ADX88932.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2006_A]
gi|323513943|gb|ADX89392.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2001_A]
gi|323514171|gb|ADX89619.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2004_A]
Length = 326
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L + + + INS GG A +TM I T S +
Sbjct: 29 SDFQEELATMRMATENDIVHIIINSGGGRDDTMKAFLNTMNQSPAHIITEIESDCCSAVT 88
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++ G++ +A ++H + G G+ +++ + + K RL Y K+ T
Sbjct: 89 MIFLNGDE--FRVSDDAEFMIHTGAYGTRGKENNVRQQVEFFAKSNARLMYKYYKHF-LT 145
Query: 177 YEEVEKTLD-RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
EE+E ++ +D M++ E + L R + E+ +
Sbjct: 146 PEEIEAAIEGKDFWMNSDEIIER------LEQRQKLFEEEE 180
>gi|226949137|ref|YP_002804228.1| serine protease [Clostridium botulinum A2 str. Kyoto]
gi|226844288|gb|ACO86954.1| serine protease [Clostridium botulinum A2 str. Kyoto]
Length = 247
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/180 (20%), Positives = 75/180 (41%), Gaps = 17/180 (9%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++V G+I D LE + I++YINS GG VT I +Q
Sbjct: 17 IYVYGEIIGGSEKWDESDVTFNDFKDNLEGLTGNETINMYINSIGGSVTTTQGIIAMLQR 76
Query: 99 IKPP---ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
K I+ G AS S L + +A ++ +++H P G ++++
Sbjct: 77 AKGKGVTINATIDGIGASCASFLPLVAD--NVYAYKSSLLMVHHPYTLCIGNVDELQKQI 134
Query: 156 QDIVKI-KRRLNEIYVKNCG--KTYEEVEKTLDRDHIMSASEACD-WGVVDKVLMSRIDI 211
+ KI + +Y+ T ++++ +D++ ++A E + + + ++L D+
Sbjct: 135 DLLNKIENSVMMPLYLNKAKESITKDKIKNLVDKETWLNAKEMSEIFNI--EILEDDKDL 192
>gi|323513712|gb|ADX89162.1| ClpP ATP-dependent protease subunit [Vibrio phage ICP1_2005_A]
Length = 326
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 10/161 (6%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L + + + INS GG A +TM I T S +
Sbjct: 29 SDFQEELATMRMATENDIVHIIINSGGGRDDTMKAFLNTMNQSPAHIITEIESDCCSAVT 88
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++ G++ +A ++H + G G+ +++ + + K RL Y K+ T
Sbjct: 89 MIFLNGDE--FRVSDDAEFMIHTGAYGTRGKENNVRQQVEFFAKSNARLMYKYYKHF-LT 145
Query: 177 YEEVEKTLD-RDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
EE+E ++ +D M++ E + L R + E+ +
Sbjct: 146 PEEIEAAIEGKDFWMNSDEIIER------LEQRQKLFEEEE 180
>gi|167766697|ref|ZP_02438750.1| hypothetical protein CLOSS21_01203 [Clostridium sp. SS2/1]
gi|317497526|ref|ZP_07955845.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|167711634|gb|EDS22213.1| hypothetical protein CLOSS21_01203 [Clostridium sp. SS2/1]
gi|291558361|emb|CBL37161.1| Protease subunit of ATP-dependent Clp proteases [butyrate-producing
bacterium SSC/2]
gi|316895209|gb|EFV17372.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
Length = 216
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L +E + K I + IN+ GG V G+AI + + + P + +G + S+G
Sbjct: 45 EHMIPALAKVEQDESIKGILILINTIGGDVECGLAIAELIASLSKPTVSLVLGGSHSIGV 104
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + F + +A +++H G + + ++I KI+ R+ +C
Sbjct: 105 PLAVAAD--HSFIVKSATMMIHPVRSS--GTFIGVIQSYRNIEKIQDRITTFISDHCKMK 160
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
E VE+ + D I+S EA G++D+
Sbjct: 161 KERVEELMLHIGQQVKDVGMILSGEEAVKEGLIDE 195
>gi|229136614|ref|ZP_04265295.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|228646846|gb|EEL03000.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
Length = 159
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
++ + + G A S+ S++ AG+K NA +++H+P G G A ++ +
Sbjct: 1 MIKRHQGMKTVHVDGLAGSIASIIALAGDK--LIVPSNAYLMIHKPWSGAYGNAKELRKM 58
Query: 155 AQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASEACDW 198
A+D+ I+ + +Y +N G E + + + + ++ +A ++
Sbjct: 59 AEDLDAIEEGIINVYKENLKDGVDIEVIREMVQNETWLNGLKASEY 104
>gi|226942392|ref|YP_002797465.1| clp protease [Azotobacter vinelandii DJ]
gi|226717319|gb|ACO76490.1| clp protease [Azotobacter vinelandii DJ]
Length = 142
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 82 PGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS 141
GG + G ++Y+ + + P++T +G SMG+++ AG++ +++ L H
Sbjct: 1 MGGECSYGFSLYNFLVSLPIPVNTHNLGTVESMGNIIFLAGQRRTACQ--HSKFLFHPFH 58
Query: 142 GGFSGQASD--IERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRD-HIMSASEAC 196
G + +A + + I + +V + L D I++ EA
Sbjct: 59 WTIHGSVDHARMSEYAMSLDFDRVLYARIVAERTLGAMDPLDVSQYLTADSKILTPDEAL 118
Query: 197 DWGVVDKV 204
G++ V
Sbjct: 119 AAGLIHAV 126
>gi|253682717|ref|ZP_04863514.1| putative Clp protease [Clostridium botulinum D str. 1873]
gi|253562429|gb|EES91881.1| putative Clp protease [Clostridium botulinum D str. 1873]
Length = 231
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 58 EHVIPQLVDIEMNDAIEGVLIILNTVGGDVEAGLAIAEMISSLSKPSVSLVIGGGHSIGV 117
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F P+A +++H +G + + + K++ R+ + +
Sbjct: 118 PL--ATCANYSFISPSATMIVHPIR--MNGLVLGVPQTFEYFNKMQERIIDFIKRTSKIN 173
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ + + D I+ +A D+G++D+V
Sbjct: 174 KDTLRSLMLQTDELLNDMGTILIGKQAVDYGLIDEV 209
>gi|134299785|ref|YP_001113281.1| peptidase S14, ClpP [Desulfotomaculum reducens MI-1]
gi|134052485|gb|ABO50456.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 276
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E ++ + + L +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 99 EHIIPQLVGIEQDDNVEGVLLVLNTVGGDVEAGLAIAEVVATMTKPTVTLVLGGGHSIGV 158
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + + P A + +H G + + + K++ R+ ++ T
Sbjct: 159 PIAVSSK--YSYIAPTASMTIHPIRLN--GLVIGVPQTYDYLDKMQDRVIRFVTEHSRVT 214
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ + + RD ++ +A + G++D V
Sbjct: 215 EEKFRQLMFKTGELARDIGTVVIGKDAVETGLIDAV 250
>gi|153954066|ref|YP_001394831.1| protease [Clostridium kluyveri DSM 555]
gi|146346947|gb|EDK33483.1| Predicted protease [Clostridium kluyveri DSM 555]
Length = 229
Score = 49.6 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L+ +E + + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 61 EHVIPNLILMENDPRVEGVLVVLNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 120
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P A +++H +G + + Q K++ R+NE V+ T
Sbjct: 121 PLATASD--YSFISPTATMIVHPIR--MNGLIIGVPQTFQYFNKMQERINEFIVRTSRIT 176
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++ + D I+ +A + G++DKV
Sbjct: 177 REKLSDLMLQSDDLLNDMGTILIGKQAVEQGLIDKV 212
>gi|119473463|ref|ZP_01614970.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
gi|119444459|gb|EAW25792.1| ATP-dependent Clp protease proteolytic subunit [Alteromonadales
bacterium TW-7]
Length = 32
Score = 49.2 bits (116), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 21/26 (80%)
Query: 13 DVFLGLVPMVVEQTNRGERSYDIYSR 38
D LVPMVVEQT +GERSYDIYSR
Sbjct: 7 DPLNALVPMVVEQTPKGERSYDIYSR 32
>gi|283779627|ref|YP_003370382.1| hypothetical protein Psta_1848 [Pirellula staleyi DSM 6068]
gi|283438080|gb|ADB16522.1| hypothetical protein Psta_1848 [Pirellula staleyi DSM 6068]
Length = 195
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/159 (20%), Positives = 65/159 (40%), Gaps = 8/159 (5%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ V G++ +H +C +LL A P E++LY NSPGG A M++ ++ +
Sbjct: 14 IAVMGELTEHE-PDLCEKLL---AVPPGGEVTLYFNSPGGSAYAAMSLASIIKLRNLQAT 69
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQ--ASDIERHAQDIVKIK 162
G+ +S +A K R P++ L H ++ A+ ++
Sbjct: 70 GVVTGECSSAALWPFAACIK--RLVTPHSVALFHPMKWESEEHVGIAEAAEWARHFSLLE 127
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
+ ++++ G + E + + +S E G+
Sbjct: 128 KEMDQLLADLFGISLEVIAPWMRPGRYVSGRELAAAGLA 166
>gi|228969755|ref|ZP_04130523.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228789948|gb|EEM37762.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 138
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ R + YV GK+ EE+ + + M +A + D+++
Sbjct: 1 MLKITDRAIVNAYVIKSGKSEEELLNMMAEETWMGPQQALENNFADEIM 49
>gi|146307288|ref|YP_001187753.1| peptidase S14, ClpP [Pseudomonas mendocina ymp]
gi|145575489|gb|ABP85021.1| peptidase S14, ClpP [Pseudomonas mendocina ymp]
Length = 183
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/172 (18%), Positives = 69/172 (40%), Gaps = 12/172 (6%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
++ +V T I + + E+ + I + GG + G ++Y+ + +
Sbjct: 1 MRTHVVHFTAPINSYTCGQFIDK-CSQAIHQGADELVIKIATMGGECSYGFSLYNFLISL 59
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P+ T +G SMG+++ AG+ R A +++ L H A D R ++ +
Sbjct: 60 PVPVKTHNLGTVESMGNIIFLAGQ--TRTACQHSKFLFHPF-HWTVNGAVDHTRMSEYAM 116
Query: 160 KIKRRLNEIYV---KNCGK----TYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ L ++Y C + + ++ I++ EA G++ V
Sbjct: 117 SLDYDL-QLYAAIVDECTQGAQAPLDVLDCLTAAPRILNVEEALAAGIIHSV 167
>gi|302389784|ref|YP_003825605.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200412|gb|ADL07982.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 236
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/174 (16%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + + + +N+ GG V AG+A+ + + + P + +G S+G
Sbjct: 63 EHIIPQLVAIEQNPKIEGLLVILNTIGGDVEAGLALAEIIASMTKPTVSLVLGGGHSIGV 122
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + I +G + + + + K++ R+ + V++
Sbjct: 123 PIAVASDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQDRVIKFVVEHSKIE 178
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV------LMSRIDIEEKSK 216
E + + + RD ++ ++A +G++++V + ++ + K
Sbjct: 179 EETLRRLMFNTGQLARDIGTVLVGADAVRYGLINEVGGLGAAVKKLEELISEKK 232
>gi|110803390|ref|YP_698964.1| Clp protease [Clostridium perfringens SM101]
gi|168207521|ref|ZP_02633526.1| clp protease [Clostridium perfringens E str. JGS1987]
gi|169342742|ref|ZP_02863782.1| clp protease [Clostridium perfringens C str. JGS1495]
gi|110683891|gb|ABG87261.1| putative endopeptidase [Clostridium perfringens SM101]
gi|169299248|gb|EDS81318.1| clp protease [Clostridium perfringens C str. JGS1495]
gi|170661146|gb|EDT13829.1| clp protease [Clostridium perfringens E str. JGS1987]
Length = 229
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + K I +N+ GG V AG+AI + ++ +K P + +G S+G
Sbjct: 57 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLKKPTVSLVIGGGHSIGV 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + K++ R+N+ ++
Sbjct: 117 PLATASK--YSFISPSATMIIHPIR--MNGLVIGVPQTFNYFNKMQERINDFIIRTSEIK 172
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ ++K + D I+ EA G++++V
Sbjct: 173 LDVLKKMMMQTDELLNDMGTILVGEEAVKCGLINEV 208
>gi|224826601|ref|ZP_03699702.1| peptidase S14 ClpP [Lutiella nitroferrum 2002]
gi|224601202|gb|EEG07384.1| peptidase S14 ClpP [Lutiella nitroferrum 2002]
Length = 217
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/153 (22%), Positives = 63/153 (41%), Gaps = 12/153 (7%)
Query: 46 FVTGQIEDHMATLICAQLLF-LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
++ G+I+ A+ L + L + + I L++N+ GG GM I + MQ +
Sbjct: 40 YLCGEIQ---ASHFYTNLFYTLRSASETDIIYLHLNTTGGDFDTGMQIINNMQSSCAHVI 96
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T +A SMG+L+ AG++ N +++ H A I +
Sbjct: 97 TVLEARAYSMGALIFLAGDELEVQ--DNCQLMFH---IYSGTFAGRGTEQQAQIQAVSSW 151
Query: 165 LNEIYVKNCG--KTYEEVEKTLD-RDHIMSASE 194
++ + C + EV+K L D M + E
Sbjct: 152 FEKVMQRICQPFLSTAEVDKVLKGADVWMDSDE 184
>gi|237795844|ref|YP_002863396.1| Clp protease family protein [Clostridium botulinum Ba4 str. 657]
gi|229262404|gb|ACQ53437.1| Clp protease family protein [Clostridium botulinum Ba4 str. 657]
Length = 226
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 55 EHLIPQLIALETSKDVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 114
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P A +++H +G + + + K++ R+ E V+ +
Sbjct: 115 PLATSAD--YSFISPTATMIVHPIR--MNGLIIGVPQTFEYFNKMQERIIEFIVRTSKIS 170
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++++ + D I+ +A + G++++V
Sbjct: 171 KEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEV 206
>gi|219854679|ref|YP_002471801.1| hypothetical protein CKR_1336 [Clostridium kluyveri NBRC 12016]
gi|219568403|dbj|BAH06387.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 241
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L+ +E + + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 73 EHVIPNLILMENDPRVEGVLVVLNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 132
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P A +++H +G + + Q K++ R+NE V+ T
Sbjct: 133 PLATASD--YSFISPTATMIVHPIR--MNGLIIGVPQTFQYFNKMQERINEFIVRTSRIT 188
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++ + D I+ +A + G++DKV
Sbjct: 189 REKLSDLMLQSDDLLNDMGTILIGKQAVEQGLIDKV 224
>gi|18310659|ref|NP_562593.1| Clp protease [Clostridium perfringens str. 13]
gi|18145340|dbj|BAB81383.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 247
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + K I +N+ GG V AG+AI + ++ +K P + +G S+G
Sbjct: 75 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLKKPTVSLVIGGGHSIGV 134
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + K++ R+N+ ++
Sbjct: 135 PLATASQ--YSFISPSATMIIHPIR--MNGLVIGVPQTFNYFNKMQERINDFIIRTSEIK 190
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ ++K + D I+ EA G++++V
Sbjct: 191 LDVLKKMMMQTDELLNDMGTILVGEEAVKCGLINEV 226
>gi|110799331|ref|YP_696364.1| Clp protease [Clostridium perfringens ATCC 13124]
gi|168211435|ref|ZP_02637060.1| clp protease [Clostridium perfringens B str. ATCC 3626]
gi|168214490|ref|ZP_02640115.1| clp protease [Clostridium perfringens CPE str. F4969]
gi|168216964|ref|ZP_02642589.1| clp protease [Clostridium perfringens NCTC 8239]
gi|182626367|ref|ZP_02954121.1| clp protease [Clostridium perfringens D str. JGS1721]
gi|110673978|gb|ABG82965.1| clp protease [Clostridium perfringens ATCC 13124]
gi|170710555|gb|EDT22737.1| clp protease [Clostridium perfringens B str. ATCC 3626]
gi|170714034|gb|EDT26216.1| clp protease [Clostridium perfringens CPE str. F4969]
gi|177908318|gb|EDT70866.1| clp protease [Clostridium perfringens D str. JGS1721]
gi|182380948|gb|EDT78427.1| clp protease [Clostridium perfringens NCTC 8239]
Length = 229
Score = 48.9 bits (115), Expect = 5e-04, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + K I +N+ GG V AG+AI + ++ +K P + +G S+G
Sbjct: 57 EHMIPQLIDIEQNDRIKGILFVLNTVGGDVEAGLAIAEMIRSLKKPTVSLVIGGGHSIGV 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +A + F P+A +++H +G + + K++ R+N+ ++
Sbjct: 117 PLATASQ--YSFISPSATMIIHPIR--MNGLVIGVPQTFNYFNKMQERINDFIIRTSEIK 172
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ ++K + D I+ EA G++++V
Sbjct: 173 LDVLKKMMMQTDELLNDMGTILVGEEAVKCGLINEV 208
>gi|168184614|ref|ZP_02619278.1| Clp protease [Clostridium botulinum Bf]
gi|182672304|gb|EDT84265.1| Clp protease [Clostridium botulinum Bf]
Length = 226
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 55 EHLIPQLIALETSKDVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 114
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P A +++H +G + + + K++ R+ E V+ +
Sbjct: 115 PLATSAD--YSFISPTATMIVHPIR--MNGLIIGVPQTFEYFNKMQERIIEFIVRTSKIS 170
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++++ + D I+ +A + G++++V
Sbjct: 171 KEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEV 206
>gi|170754867|ref|YP_001781951.1| Clp protease [Clostridium botulinum B1 str. Okra]
gi|169120079|gb|ACA43915.1| clp protease [Clostridium botulinum B1 str. Okra]
Length = 230
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 55 EHLIPQLIALETSKEVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 114
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P A +++H +G + + + K++ R+ E V+ +
Sbjct: 115 PLATSAD--YSFISPTATMIVHPIR--MNGLIIGVPQTFEYFNKMQERIIEFIVRTSKIS 170
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++++ + D I+ +A + G++++V
Sbjct: 171 KEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEV 206
>gi|319649503|ref|ZP_08003659.1| TepA protein [Bacillus sp. 2_A_57_CT2]
gi|317398665|gb|EFV79347.1| TepA protein [Bacillus sp. 2_A_57_CT2]
Length = 246
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 69 EHLIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAISEMLASLSKPTVSIVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ +
Sbjct: 129 PIAVSCDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYMDKMQDRVINFVTKHSNIS 184
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
++ + + RD + +A ++G++D+V
Sbjct: 185 EQKFKDLMFDKGNLTRDIGTNVVGRDAVEYGLIDEV 220
>gi|187778999|ref|ZP_02995472.1| hypothetical protein CLOSPO_02594 [Clostridium sporogenes ATCC
15579]
gi|187772624|gb|EDU36426.1| hypothetical protein CLOSPO_02594 [Clostridium sporogenes ATCC
15579]
Length = 231
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 60 EHLIPQLIALETSKEVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 119
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P A +++H +G + + + K++ R+ E V+ +
Sbjct: 120 PLATSAD--YSFISPTATMIVHPIR--MNGLIIGVPQTFEYFNKMQERIIEFIVRTSKIS 175
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++++ + D I+ +A + G++++V
Sbjct: 176 KEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEV 211
>gi|168187899|ref|ZP_02622534.1| Clp protease [Clostridium botulinum C str. Eklund]
gi|169294242|gb|EDS76375.1| Clp protease [Clostridium botulinum C str. Eklund]
Length = 232
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 60 EHLIPQLVDIETNDAIEGVLIILNTVGGDVEAGLAIAEMINSLSKPSVSLVIGGGHSIGV 119
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P+A +++H +G + + + K++ R+ + +
Sbjct: 120 PLATSAD--YSFISPSATMIIHPIR--MNGLVLGVPQTFEYFNKMQERIIDFITRTSKMK 175
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E + D I+ +A D+G++D+V
Sbjct: 176 NETFRSLMLQTDELLNDMGTILIGKQAVDYGLIDEV 211
>gi|148380363|ref|YP_001254904.1| Clp protease [Clostridium botulinum A str. ATCC 3502]
gi|153932771|ref|YP_001384583.1| Clp protease [Clostridium botulinum A str. ATCC 19397]
gi|153934679|ref|YP_001388099.1| Clp protease [Clostridium botulinum A str. Hall]
gi|153941144|ref|YP_001391706.1| Clp protease [Clostridium botulinum F str. Langeland]
gi|168180713|ref|ZP_02615377.1| clp protease [Clostridium botulinum NCTC 2916]
gi|170759121|ref|YP_001787719.1| Clp protease [Clostridium botulinum A3 str. Loch Maree]
gi|226949761|ref|YP_002804852.1| Clp protease family protein [Clostridium botulinum A2 str. Kyoto]
gi|148289847|emb|CAL83955.1| translocation-enhancing protein TepA [Clostridium botulinum A str.
ATCC 3502]
gi|152928815|gb|ABS34315.1| Clp protease family protein [Clostridium botulinum A str. ATCC
19397]
gi|152930593|gb|ABS36092.1| Clp protease family protein [Clostridium botulinum A str. Hall]
gi|152937040|gb|ABS42538.1| clp protease [Clostridium botulinum F str. Langeland]
gi|169406110|gb|ACA54521.1| Clp protease family protein [Clostridium botulinum A3 str. Loch
Maree]
gi|182668575|gb|EDT80554.1| clp protease [Clostridium botulinum NCTC 2916]
gi|226841950|gb|ACO84616.1| Clp protease family protein [Clostridium botulinum A2 str. Kyoto]
gi|295319734|gb|ADG00112.1| clp protease [Clostridium botulinum F str. 230613]
gi|322806674|emb|CBZ04243.1| translocation-enhancing protein TepA [Clostridium botulinum H04402
065]
Length = 230
Score = 48.5 bits (114), Expect = 6e-04, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 74/156 (47%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ LE + + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 55 EHLIPQLIALETSKEVEGVFIILNTVGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 114
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ + F P A +++H +G + + + K++ R+ E V+ +
Sbjct: 115 PLATSAD--YSFISPTATMIVHPIR--MNGLIIGVPQTFEYFNKMQERIIEFIVRTSKIS 170
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E++++ + D I+ +A + G++++V
Sbjct: 171 KEKLKEFMLQSDELLNDMGTILIGKQAVESGIINEV 206
>gi|228966617|ref|ZP_04127665.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228793088|gb|EEM40642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 134
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 10/49 (20%), Positives = 21/49 (42%)
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ R + YV GK+ EE+ + + M +A + D+++
Sbjct: 1 MLKITDRAIVNAYVIKSGKSEEELLNMMAEETWMGPQQALENNFADEIM 49
>gi|288931153|ref|YP_003435213.1| hypothetical protein Ferp_0768 [Ferroglobus placidus DSM 10642]
gi|288893401|gb|ADC64938.1| protein of unknown function DUF107 [Ferroglobus placidus DSM 10642]
Length = 424
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 71/176 (40%), Gaps = 16/176 (9%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
V + G I + I + + E I + +++PGG+V + I + K P+
Sbjct: 24 VRIEGAINEGTVIKI-ERAFKIAEEENADAILITLDTPGGLVKSTEKIVSMILSSKIPVV 82
Query: 105 TFCM---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
T+ +AS GS++L AG + + S G + + + K
Sbjct: 83 TYVYPQGAFSASAGSIILIAG---------HVAAMSEGTSVGAATPIAVGVEGTKVEEKA 133
Query: 162 KRRLNEI---YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L + G+ +EK + + +SA EA + V+D + S+ ++ EK
Sbjct: 134 VKYLASYVKSIAEKRGRNATAIEKFVTEAYSLSAKEALKYNVIDVIANSKEELFEK 189
>gi|226949979|ref|YP_002805070.1| Clp protease [Clostridium botulinum A2 str. Kyoto]
gi|226842902|gb|ACO85568.1| Clp protease [Clostridium botulinum A2 str. Kyoto]
Length = 241
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 36/162 (22%), Positives = 67/162 (41%), Gaps = 14/162 (8%)
Query: 45 VFVTGQI------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQF 98
++V G+I D LE ++ I++YINS GG V A I +Q
Sbjct: 17 IYVYGEIIGGSKKWDESDVTFNDFRDNLERLTGKETINMYINSCGGSVIATQGIIAMLQR 76
Query: 99 IKPP---ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHA 155
K I+ G AS S L + + + +++H+P G + +++
Sbjct: 77 AKDKGVTINATIDGLGASCSSFLPLIADNVYAYNS--SMLMIHKPFTFAIGNSDELKAQI 134
Query: 156 QDIVKI-KRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSASE 194
+ + KI + IY+ G T + ++ + ++ +SA E
Sbjct: 135 EMLDKIENNVMMPIYMSKVKEGITEDYIKDLVAKETWLSAKE 176
>gi|15614960|ref|NP_243263.1| hypothetical protein BH2397 [Bacillus halodurans C-125]
gi|14548276|sp|Q9KA93|TEPA_BACHD RecName: Full=Translocation-enhancing protein TepA
gi|10175017|dbj|BAB06116.1| BH2397 [Bacillus halodurans C-125]
Length = 256
Score = 48.5 bits (114), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 77 EHIIPQLVAAEQNKKIEGLLIILNTVGGDVEAGLAIAEMVATMSKPTVTLVLGGGHSIGV 136
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A I +G + + + + K++ R+ K+ +
Sbjct: 137 PIAVAANYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVSFVTKHSHIS 192
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + ++A +G++D+V
Sbjct: 193 EEKFKELMFSKGNLTRDIGTNVIGTDAVTYGLIDEV 228
>gi|255568672|ref|XP_002525308.1| conserved hypothetical protein [Ricinus communis]
gi|223535403|gb|EEF37076.1| conserved hypothetical protein [Ricinus communis]
Length = 75
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
++ + + Q + ++++K++ L IY + K V + ++ D MSA
Sbjct: 1 MVMIHQPIADFYEAQIREFLLEVEELLKLREILTRIYAQRTEKPLWVVFEEIETDVFMSA 60
Query: 193 SEACDWGVVDKV 204
+EA G+VD +
Sbjct: 61 AEAQAHGIVDLI 72
>gi|163782343|ref|ZP_02177341.1| nodulation competitiveness protein NfeD [Hydrogenivirga sp.
128-5-R1-1]
gi|159882376|gb|EDP75882.1| nodulation competitiveness protein NfeD [Hydrogenivirga sp.
128-5-R1-1]
Length = 439
Score = 48.1 bits (113), Expect = 8e-04, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 9/174 (5%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
G I I L E E L +N+PGG+ + + Q P+ F
Sbjct: 26 GAITPITVDYIDRSLTKAEREGGSL-FVLQLNTPGGLAESMRRVVQRFQRSPLPVVVFVY 84
Query: 109 ---GQAASMGSLLLSAGE-----KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
G+AAS G+++ + E G + + G + + + I++
Sbjct: 85 PPGGRAASAGAIITVSAEVAAMAPGTNIGAAHPVQIGGGMPGDKKENKEEKDVMKEKILQ 144
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
K G+ + VEK + +SA EA GV+D + ++ +K
Sbjct: 145 DMLAFVRSIAKEKGRNVKVVEKMVKESLSLSAEEALREGVIDLIARDMKELLKK 198
>gi|327394887|dbj|BAK12309.1| crotonase/enoyl-coenzyme A (CoA) hydratase superfamily [Pantoea
ananatis AJ13355]
Length = 222
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 10/165 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFL-EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
VF TG + + + + L + + ++ LYI+SPGG + AG Y ++ P+
Sbjct: 40 VFFTGAVTLNKVMSLSSVLDEIGQNYKSATQVLLYISSPGGDIDAGKIGYQVVKNSPIPV 99
Query: 104 STFCMGQAASMGSLLLSAGEK----GMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+T S +++ +K G L +A + + P S D +
Sbjct: 100 TTVNASSVESSATMIYCGAQKRQVMGDSIFLLHAPTVGNAPRSNVSENMLD--EKTEFTS 157
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTL---DRDHIMSASEACDWGVV 201
+ + + IY T E++EK D ++ +A G+
Sbjct: 158 RYRNVIKTIYQSCTHLTDEQIEKITYSEDNHKLLDNKQALATGIA 202
>gi|229162598|ref|ZP_04290558.1| hypothetical protein bcere0009_33700 [Bacillus cereus R309803]
gi|228620861|gb|EEK77727.1| hypothetical protein bcere0009_33700 [Bacillus cereus R309803]
Length = 136
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 13/79 (16%), Positives = 34/79 (43%)
Query: 123 EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEK 182
+ +++H+ S G + + + A + K++ + +IY+ EE+
Sbjct: 2 AADELIMGAGSMMMIHEASTIVWGSKTLMRKEADMLEKLEDGIIDIYMTRANVEREEIRN 61
Query: 183 TLDRDHIMSASEACDWGVV 201
++ + SA+E+ + G
Sbjct: 62 MVNEETWFSANESVEIGFA 80
>gi|52080286|ref|YP_079077.1| translocation-enhancing protein [Bacillus licheniformis ATCC 14580]
gi|52785663|ref|YP_091492.1| TepA [Bacillus licheniformis ATCC 14580]
gi|319645933|ref|ZP_08000163.1| TepA protein [Bacillus sp. BT1B_CT2]
gi|52003497|gb|AAU23439.1| translocation-enhancing protein [Bacillus licheniformis ATCC 14580]
gi|52348165|gb|AAU40799.1| TepA [Bacillus licheniformis ATCC 14580]
gi|317391683|gb|EFV72480.1| TepA protein [Bacillus sp. BT1B_CT2]
Length = 248
Score = 48.1 bits (113), Expect = 9e-04, Method: Composition-based stats.
Identities = 26/174 (14%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 71 EHVIPQIVAVEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 130
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 131 PIAVSCDHSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVINFVTSHSNIS 186
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV------LMSRIDIEEKSK 216
E+ ++ + RD + ++A +G++D+ + ++ E++K
Sbjct: 187 EEKFKELMFSKGNLTRDIGTNVVGNDAVKYGLIDETGGVGQAIQKLNELIEQNK 240
>gi|317121875|ref|YP_004101878.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
gi|315591855|gb|ADU51151.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter marianensis DSM 12885]
Length = 347
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+A+ + ++ + P + +G S+G
Sbjct: 94 EHIIPQLVAVEQNPAIKGLLVILNTVGGDVEAGLALAELIRSLSKPKVSIVLGGGHSIGV 153
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + F P A + +H G + + + + K++ R+ V+N +
Sbjct: 154 PIAVAAD--ISFIAPTATMTIHPIRLT--GLVIGVPQSYEYLDKMQERIIRFVVENSRIS 209
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ + + RD ++ +A G++D+V
Sbjct: 210 RDRFRELMFRTGELARDIGTVLVGEDAVREGLIDEV 245
>gi|313901853|ref|ZP_07835274.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
gi|313467896|gb|EFR63389.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
Length = 324
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+A+ + ++ + P + +G S+G
Sbjct: 95 EHIIPQLVAVEQNPAIKGLLVILNTVGGDVEAGLALAELIRSLSKPKVSIVLGGGHSIGV 154
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + F P A + +H G + + + + K++ R+ V+N +
Sbjct: 155 PIAVAAD--VSFIAPTATMTIHPIRLT--GLVIGVPQSYEYLDKMQERIIRFVVENSRIS 210
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ + + RD ++ +A G++D+V
Sbjct: 211 RDRFRELMFRTGELARDIGTVLVGEDAVREGLIDEV 246
>gi|322511328|gb|ADX06637.1| putative protease subunit [Organic Lake phycodnavirus]
Length = 51
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
++ + + IY+ + Y E++ L +D ++A +G+VD++L
Sbjct: 3 NMKILMDMIETIYLNHTFIPYNELDTLLKKDIWLNAETCLKYGLVDEIL 51
>gi|229544380|ref|ZP_04433439.1| peptidase S14 ClpP [Bacillus coagulans 36D1]
gi|229325519|gb|EEN91195.1| peptidase S14 ClpP [Bacillus coagulans 36D1]
Length = 245
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 66 EHMIPQLVAIEQNPKIEGVLVILNTVGGDVEAGLAISEMLASLSKPTVSIVLGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ + ++
Sbjct: 126 PIAVSCSYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIKFVTRHSHVE 181
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E + + RD + EA +G++D+V
Sbjct: 182 EEVFKDLMFAKGNLTRDIGTNIVGQEAVQYGLIDEV 217
>gi|188586087|ref|YP_001917632.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|179350774|gb|ACB85044.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 280
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 71/176 (40%), Gaps = 22/176 (12%)
Query: 47 VTGQIEDHMA----------TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
+ GQIE HM + QL+ E + I + +N+ GG V AG+AI + +
Sbjct: 52 IVGQIEGHMTLPPQNKTTKYEHVLPQLVAAEQNPQVEGILVILNTVGGDVEAGLAIAEML 111
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
I P + +G S+G + A + I +GQ + +
Sbjct: 112 DSISKPSVSLVLGGGHSIGVPIAVATDYSYIAQTATMTI----HPIRLTGQLIGVPQTYD 167
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ K++ R+ ++ G E++ + + RD ++ +A G++++V
Sbjct: 168 YLEKMQDRVLSFVTQHSGIHPEQLRRLMFNSGQLARDIGTVLVGEDAVREGLINEV 223
>gi|15895087|ref|NP_348436.1| periplasmic serine protease [Clostridium acetobutylicum ATCC 824]
gi|15024785|gb|AAK79776.1|AE007690_3 Periplasmic serine protease, YMFB B.subtilis ortholog [Clostridium
acetobutylicum ATCC 824]
gi|325509225|gb|ADZ20861.1| Periplasmic serine protease [Clostridium acetobutylicum EA 2018]
Length = 226
Score = 47.7 bits (112), Expect = 0.001, Method: Composition-based stats.
Identities = 38/173 (21%), Positives = 74/173 (42%), Gaps = 18/173 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L+ +E K + + +N+ GG V AG+AI + ++ + P + +G S+G
Sbjct: 56 EEIIPRLMNVEYNPEIKGVLIILNTIGGDVEAGLAIAEMIRSLSKPTVSLVIGGGHSIGV 115
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F P A +++H +G + + Q K++ R++E V+
Sbjct: 116 PL--ATSSNYSFISPTATMIIHPIR--MNGLIIGVPQTFQYFNKMQERISEFIVRTSKIK 171
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV------LMSRIDIEEKS 215
E + + + D I+ +A +G++D V L ++ E S
Sbjct: 172 KETLTELMLKTDELLNDMGTILIGKQAVKYGLIDSVGGIKEALSKLKELIEDS 224
>gi|138894799|ref|YP_001125252.1| translocation-enhancing protein [Geobacillus thermodenitrificans
NG80-2]
gi|196247576|ref|ZP_03146278.1| peptidase S14 ClpP [Geobacillus sp. G11MC16]
gi|134266312|gb|ABO66507.1| Translocation-enhancing protein [Geobacillus thermodenitrificans
NG80-2]
gi|196212360|gb|EDY07117.1| peptidase S14 ClpP [Geobacillus sp. G11MC16]
Length = 245
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSVVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ K+ +
Sbjct: 128 PIAVSCNYSFITETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSNIS 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVIGPDAVQYGLIDEV 219
>gi|118197645|ref|YP_874038.1| ClpP protease [Thermus phage phiYS40]
gi|116266336|gb|ABJ91419.1| ClpP protease [Thermus phage phiYS40]
Length = 237
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 21/135 (15%), Positives = 51/135 (37%), Gaps = 5/135 (3%)
Query: 71 PQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFAL 130
+ I + ++ GG V M + + ++ + + AS G + + ++ RF
Sbjct: 70 NKIPIIVQFSTFGGDVMQAMRVINLIKGFERDVIFVANSIIASAGVYIFLSAKESNRFVT 129
Query: 131 PNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV----KNCGKTYEEVEKTLDR 186
N+ ++H + +++ K + L I+ K G + + K +
Sbjct: 130 SNSFFIMHDFLVNHPQPIG-SKDIVENLDKQYKVLKTIFENEFIKKIGLKKKVIGKGAHK 188
Query: 187 DHIMSASEACDWGVV 201
D ++ EA + +
Sbjct: 189 DIYITPEEAIKYNIA 203
>gi|297530546|ref|YP_003671821.1| peptidase S14 ClpP [Geobacillus sp. C56-T3]
gi|297253798|gb|ADI27244.1| peptidase S14 ClpP [Geobacillus sp. C56-T3]
Length = 246
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSVVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ K+ +
Sbjct: 129 PIAVSCNYSFITETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSKIS 184
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 185 EEKFKELMFSKGNLTRDIGTNVVGPDAVRYGLIDEV 220
>gi|291542999|emb|CBL16109.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
bromii L2-63]
Length = 269
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L+ +E + + + IN+ GG V AG+AI + + +K P + +G S+G
Sbjct: 84 EHVIPLLVSVEEDERIDGLLVLINTVGGDVEAGLAIAEVISGMKKPTVSIVLGGGHSIGI 143
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A +K + + +G + + + +++ R+ +N T
Sbjct: 144 PLAVAAKKSFIAKSASMTV----HPVRTTGLTLGVPQTFEYFQRMQDRITTFVAENSNIT 199
Query: 177 YEEVEKT--------LDRDHIMSASEACDWGVVDKV------LMSRIDIEEKSK 216
+ + +D I+ EA + G++D+V + + D+ ++SK
Sbjct: 200 KDRYNQLVLNTGELVMDIGTILEGEEAVEEGLIDEVGTVSDAIDALYDLIKESK 253
>gi|56419814|ref|YP_147132.1| hypothetical protein GK1279 [Geobacillus kaustophilus HTA426]
gi|56379656|dbj|BAD75564.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 246
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSVVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ K+ +
Sbjct: 129 PIAVSCNYSFITETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSKIS 184
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 185 EEKFKELMFSKGNLTRDIGTNVVGPDAVRYGLIDEV 220
>gi|220931715|ref|YP_002508623.1| peptidase S14 ClpP [Halothermothrix orenii H 168]
gi|219993025|gb|ACL69628.1| peptidase S14 ClpP [Halothermothrix orenii H 168]
Length = 264
Score = 47.3 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG + AG+AI + + + P + +G S+G
Sbjct: 90 EHIIPQLVAVEENPKIKGLLVILNTVGGDIEAGLAISEMINSMTKPTVSVVLGGGHSIGV 149
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + A + I +G + + + + K++ R+ ++
Sbjct: 150 PIAVSTDYSYIVATASMTI----HPIRLTGMVIGVPQTYEYLDKMQDRVISFVTQHSRIL 205
Query: 177 YEEVEKTLD------RD--HIMSASEACDWGVVDKV 204
+ + + RD ++ EA + G++D+V
Sbjct: 206 PDHFRQLMFQTGELVRDVGTVLVGEEAVNHGIIDEV 241
>gi|296330894|ref|ZP_06873369.1| protein export-enhancing factor [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674412|ref|YP_003866084.1| protein export-enhancing factor [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151899|gb|EFG92773.1| protein export-enhancing factor [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412656|gb|ADM37775.1| protein export-enhancing factor [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 245
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 128 PIAVSCDYSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVKFVTSHSNVN 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
++ ++ + RD + +A ++G++D V
Sbjct: 184 EDKFKELMFSKGNLTRDIGTNVVGKDAVEYGLIDHV 219
>gi|160934088|ref|ZP_02081475.1| hypothetical protein CLOLEP_02951 [Clostridium leptum DSM 753]
gi|156866761|gb|EDO60133.1| hypothetical protein CLOLEP_02951 [Clostridium leptum DSM 753]
Length = 291
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E E + + +N+ GG V AG+AI + + +K P + +G S+G
Sbjct: 86 EHVLPQLVAIEEEPRIDGLLVLLNTVGGDVEAGLAIAELLAGMKKPTVSMVLGGGHSIGV 145
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A +K + I SG + + + +++ R+ +N T
Sbjct: 146 PLAVAAKKSFIAKSASMTI----HPVRMSGLVLGVPQTLEYFQRMQDRITSFVAENSNIT 201
Query: 177 YEEVEKT--------LDRDHIMSASEACDWGVVDK 203
E + +D ++ +A G++D+
Sbjct: 202 PERFYELSMNTEELVMDVGTVLDGEDAVKEGLIDR 236
>gi|331084073|ref|ZP_08333180.1| hypothetical protein HMPREF0992_02104 [Lachnospiraceae bacterium
6_1_63FAA]
gi|330402435|gb|EGG82005.1| hypothetical protein HMPREF0992_02104 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 234
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + +N+ GG V AG+AI + + + P + +G
Sbjct: 61 EHVLPKLAMIEDSKETDGLLILLNTVGGDVEAGLAIAEMIASLSKPTVSLVLG--GGHSI 118
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + +P+A +++H G + + +++ KI+ R+ +
Sbjct: 119 GVPMAVSADYSYIVPSATMVIHPVRSN--GMFIGVMQTYRNMEKIQDRITRFIASHSKMP 176
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
+ +E+ + D ++ EA G++D+
Sbjct: 177 QKRIEQLMLDTSQLVKDVGTMLEGEEAVKEGLIDE 211
>gi|143581|gb|AAA22783.1| ORF X [Bacillus subtilis]
Length = 244
Score = 47.3 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 67 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 126
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + + T
Sbjct: 127 PIAVSCDYSYIAETSTVTI----HPVRLTGLVIGVPQTFEYLDKMQERVVKFVTSHSNIT 182
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDK 203
E+ ++ + RD + +A +G++D
Sbjct: 183 EEKFKELMFSKGNLTRDIGTNVVGKDAVKYGLIDH 217
>gi|18314240|ref|NP_560907.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2]
gi|18161836|gb|AAL65089.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2]
Length = 608
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 60/184 (32%), Gaps = 29/184 (15%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
IV V I D+ + + L+ +N + L INSPGG V A +Y T++ + +
Sbjct: 89 IVPVDQPIFDYYVDFLIKYVKKLQFDNKTAGVILLINSPGGAVGATERLYSTIKGLNKTV 148
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNAR-----ILLHQPSGGFSGQASDIERHAQDI 158
G AAS +A G +A P++ ++ + D
Sbjct: 149 YAVVAGLAASGAY--YTAVAAGRIYATPSSWVGSIGVVALLWPDEYLIDLPDYIYTTGPF 206
Query: 159 VKIKRRLNEIY------------------VKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
L E Y E E I +A A G+
Sbjct: 207 KYYGMDLTEFYNDIEKTRANFVAAVLKGRAGRLKADPEVFETA----KIFNAETALRLGL 262
Query: 201 VDKV 204
+DK+
Sbjct: 263 IDKI 266
>gi|261419480|ref|YP_003253162.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61]
gi|319766296|ref|YP_004131797.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52]
gi|261375937|gb|ACX78680.1| peptidase S14 ClpP [Geobacillus sp. Y412MC61]
gi|317111162|gb|ADU93654.1| peptidase S14 ClpP [Geobacillus sp. Y412MC52]
Length = 246
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 69 EHVIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSVVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ K+ +
Sbjct: 129 PIAVSCNYSFITETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVVRFVTKHSKIS 184
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++D+V
Sbjct: 185 EEKFKELMFSKGNLTRDIGTNVVGPDAVRYGLIDEV 220
>gi|260587637|ref|ZP_05853550.1| translocation-enhancing protein TepA [Blautia hansenii DSM 20583]
gi|260541902|gb|EEX22471.1| translocation-enhancing protein TepA [Blautia hansenii DSM 20583]
Length = 256
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + +N+ GG V AG+AI + + + P + +G
Sbjct: 83 EHVLPKLAMIEDSKETDGLLILLNTVGGDVEAGLAIAEMIASLSKPTVSLVLG--GGHSI 140
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + +P+A +++H G + + +++ KI+ R+ +
Sbjct: 141 GVPMAVSADYSYIVPSATMVIHPVRSN--GMFIGVMQTYRNMEKIQDRITRFIASHSKMP 198
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
+ +E+ + D ++ EA G++D+
Sbjct: 199 QKRIEQLMLDTSQLVKDVGTMLEGEEAVKEGLIDE 233
>gi|218290114|ref|ZP_03494276.1| peptidase S14 ClpP [Alicyclobacillus acidocaldarius LAA1]
gi|218239823|gb|EED07012.1| peptidase S14 ClpP [Alicyclobacillus acidocaldarius LAA1]
Length = 259
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 41/212 (19%), Positives = 82/212 (38%), Gaps = 43/212 (20%)
Query: 20 PMVVEQTNRGERSY----DIYSRLLKERIVFVTGQIEDHMA----------TLICAQLLF 65
P VE E + DIY + V GQIE HMA + QL+
Sbjct: 28 PSSVESLGANEPAAVVTGDIY-------CLTVIGQIEGHMALPPQNKTTKYEHVIPQLVA 80
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKG 125
+E + + + +N+ GG V AG+AI + + + P + +G S+G + A +
Sbjct: 81 VEESDKIDGLLIILNTVGGDVEAGLAIAELVASMSKPKVSVVLGGGHSIGVPIAVAADYT 140
Query: 126 MRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD 185
+ I +G +++ + + K++ R+ V++ + + +
Sbjct: 141 FIAESASMTI----HPIRLNGLVIGVQQSFEYLEKMQDRVIRFVVEHS-----RISEDMF 191
Query: 186 RDHIMS-------------ASEACDWGVVDKV 204
R +++ +A +G+ D+V
Sbjct: 192 RHLMLNTGEMAKDIGTTVVGRDAVKYGLCDEV 223
>gi|255767379|ref|NP_389561.3| protein export-enhancing factor [Bacillus subtilis subsp. subtilis
str. 168]
gi|321315446|ref|YP_004207733.1| protein export-enhancing factor [Bacillus subtilis BSn5]
gi|238054399|sp|Q99171|TEPA_BACSU RecName: Full=Translocation-enhancing protein TepA
gi|225185006|emb|CAB13552.3| protein export-enhancing factor [Bacillus subtilis subsp. subtilis
str. 168]
gi|291484234|dbj|BAI85309.1| translocation-enhancing protein [Bacillus subtilis subsp. natto
BEST195]
gi|320021720|gb|ADV96706.1| protein export-enhancing factor [Bacillus subtilis BSn5]
Length = 245
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + + T
Sbjct: 128 PIAVSCDYSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVKFVTSHSNIT 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDK 203
E+ ++ + RD + +A +G++D
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAVKYGLIDH 218
>gi|258511441|ref|YP_003184875.1| peptidase S14 ClpP [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478167|gb|ACV58486.1| peptidase S14 ClpP [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 259
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 65/161 (40%), Gaps = 22/161 (13%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 72 EHVIPQLVAVEESDKIDGLLIILNTVGGDVEAGLAIAELVASMSKPKVSVVLGGGHSIGV 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + + I +G +++ + + K++ R+ V++
Sbjct: 132 PIAVAADYTFIAESASMTI----HPIRLNGLVIGVQQSFEYLEKMQDRVIRFVVEHS--- 184
Query: 177 YEEVEKTLDRDHIMS-------------ASEACDWGVVDKV 204
+ + + R +++ +A +G+ D+V
Sbjct: 185 --RISEDMFRHLMLNTGEMAKDIGTTVVGRDAVKYGLCDEV 223
>gi|254519174|ref|ZP_05131230.1| peptidase S14 [Clostridium sp. 7_2_43FAA]
gi|226912923|gb|EEH98124.1| peptidase S14 [Clostridium sp. 7_2_43FAA]
Length = 246
Score = 46.9 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 31/155 (20%), Positives = 70/155 (45%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 72 EHVIPQLIAMERNDNVKGVLIILNTVGGDVEAGLAIAEMINSLSKPTVSIVIGGGHSIGV 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ F P+A +++H +G + + K++ R++ V+
Sbjct: 132 PLATSSS--YSFITPSATMIVHPIR--MNGFVIGVAQTFNYFQKMQERIDNFIVRTSKIK 187
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
+E+ + + D I+ +A + G++D+
Sbjct: 188 KDELRQMMLKSDELLNDMGTILIGKQAVECGLIDE 222
>gi|221313882|ref|ZP_03595687.1| TepA [Bacillus subtilis subsp. subtilis str. NCIB 3610]
Length = 245
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + + T
Sbjct: 128 PIAVSCDYSYIAETATVTI----HPVRLTGLVIGVPQTFEYLDKMQERVVKFVTSHSNIT 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDK 203
E+ ++ + RD + +A +G++D
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAVKYGLIDH 218
>gi|325279621|ref|YP_004252163.1| peptidase S49 [Odoribacter splanchnicus DSM 20712]
gi|324311430|gb|ADY31983.1| peptidase S49 [Odoribacter splanchnicus DSM 20712]
Length = 467
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 33/190 (17%), Positives = 65/190 (34%), Gaps = 24/190 (12%)
Query: 50 QIEDHMATLI---CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
I+D + + + L + I +++N+ GG+V ++ + + P+ F
Sbjct: 36 DIKDEIGPEVWRLARKSFDLAGQEKADYILIHMNTYGGMVVYADSLRSMILNSRKPVWVF 95
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNA------------------RILLHQPSGGFSGQA 148
AAS G+L+ A +K N + Q
Sbjct: 96 IDNNAASAGALISIACDKIYMREGANIGAATVVNQTGEAMPDKYQSYMRSMIRSTAEAQG 155
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLD--RDHIMSASEACDWGVVDKVLM 206
D +D V +R I ++ ++ D R +A EA +G D +
Sbjct: 156 RDTLVQGRDTVYRWKRNPHIAEAMVDQSI-YIQGITDSGRVVTFTAREAMKYGFCDGMAE 214
Query: 207 SRIDIEEKSK 216
S ++ +K +
Sbjct: 215 SVEEVLKKEQ 224
>gi|221309558|ref|ZP_03591405.1| TepA [Bacillus subtilis subsp. subtilis str. 168]
gi|221318805|ref|ZP_03600099.1| TepA [Bacillus subtilis subsp. subtilis str. JH642]
gi|221323077|ref|ZP_03604371.1| TepA [Bacillus subtilis subsp. subtilis str. SMY]
Length = 245
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 25/155 (16%), Positives = 63/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + + T
Sbjct: 128 PIAVSCDYSYIAETGTVTI----HPVRLTGLVIGVPQTFEYLDKMQERVVKFVTSHSNIT 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDK 203
E+ ++ + RD + +A +G++D
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAVKYGLIDH 218
>gi|147821750|emb|CAN70440.1| hypothetical protein VITISV_011901 [Vitis vinifera]
Length = 278
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ G+++E++ + DR +S EA ++ D V+
Sbjct: 221 LSYHIGQSFEKINQNTDRGFFISTKEAKEYRFTDGVI 257
>gi|154686096|ref|YP_001421257.1| TepA [Bacillus amyloliquefaciens FZB42]
gi|154351947|gb|ABS74026.1| TepA [Bacillus amyloliquefaciens FZB42]
Length = 245
Score = 46.5 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 128 PIAVSCDHSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVNFVTHHSNIS 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A D+G++D V
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAADYGLIDAV 219
>gi|308068716|ref|YP_003870321.1| Translocation-enhancing protein tepA [Paenibacillus polymyxa E681]
gi|305857995|gb|ADM69783.1| Translocation-enhancing protein tepA [Paenibacillus polymyxa E681]
Length = 282
Score = 46.5 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 74 EHIIPQLVAAEQNPRIEGLMILLNTVGGDVEAGLAIAEMIASMSKPTVTIVIGGGHSIGV 133
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I +G + + + + K++ R+ V + T
Sbjct: 134 PIAVSSTYSYIAESATMTI----HPIRMNGLVIGVPQTFEYMEKMQERVVRFVVSHSRIT 189
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
++ ++ + +RD + ++A +G++D V
Sbjct: 190 EKQFKELMFKTGELNRDIGTAVGGADAVKYGLMDAV 225
>gi|317129147|ref|YP_004095429.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
gi|315474095|gb|ADU30698.1| peptidase S14 ClpP [Bacillus cellulosilyticus DSM 2522]
Length = 248
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 30/174 (17%), Positives = 69/174 (39%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ E + + + +N+ GG V AG+A+ + + + P T +G S+G
Sbjct: 70 EHIIPQLVAAEQNPKIEGLLIILNTVGGDVEAGLALSEMISSLSKPTVTLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A I +G + + + + K++ R+ ++ +
Sbjct: 130 PIAVAANYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQDRVINFVTRHSSIS 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV------LMSRIDIEEKSK 216
E ++ + RD + +A +G++++V + ++ E+SK
Sbjct: 186 EENFKELMLSKGNLTRDIGTNVIGKDAVSYGLINEVGGIGQAIKKLNELIEQSK 239
>gi|297741666|emb|CBI32798.3| unnamed protein product [Vitis vinifera]
Length = 70
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 169 YVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ G+++E++ + DR +S EA ++ D V+
Sbjct: 13 LSYHIGQSFEKINQNTDRGFFISTKEAKEYRFTDGVI 49
>gi|310641612|ref|YP_003946370.1| peptidase s14 clpp [Paenibacillus polymyxa SC2]
gi|309246562|gb|ADO56129.1| Peptidase S14 ClpP [Paenibacillus polymyxa SC2]
Length = 282
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 62/156 (39%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ E + + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 74 EHIIPQLVAAEQNPRIEGLMILLNTVGGDVEAGLAIAEMIASMSKPTVTIVIGGGHSIGV 133
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + I SG + + + + K++ R+ V + T
Sbjct: 134 PIAVSSTYSYIAESATMTI----HPIRMSGLVIGVPQTFEYMEKMQERVVRFVVSHSRIT 189
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E ++ + +RD + +A +G++D V
Sbjct: 190 EERFKELMFKTGELNRDIGTAVGGIDAVKYGLMDAV 225
>gi|303239203|ref|ZP_07325732.1| peptidase S49 [Acetivibrio cellulolyticus CD2]
gi|302593248|gb|EFL62967.1| peptidase S49 [Acetivibrio cellulolyticus CD2]
Length = 269
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 31/154 (20%), Positives = 59/154 (38%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + L +N+ GG V AG+AI + + + P + +G
Sbjct: 85 EHVIPQLVAIEESKEIDGLLLILNTVGGDVEAGLAIAEMIASMSKPTVSLVLG--GGHSI 142
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F P+A + +H G + + + K++ R+ + KN +
Sbjct: 143 GVPMAVSTKYSFIAPSATMTIHPIRLN--GMVIGVPQTFEYFDKMQERVVQFVAKNSNIS 200
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVD 202
E + D I+ EA G++D
Sbjct: 201 KETFRSLMLKTGELANDVGTILFGEEAVTQGLID 234
>gi|297617218|ref|YP_003702377.1| peptidase S14 ClpP [Syntrophothermus lipocalidus DSM 12680]
gi|297145055|gb|ADI01812.1| peptidase S14 ClpP [Syntrophothermus lipocalidus DSM 12680]
Length = 236
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+A+ + + + P + +G S+G
Sbjct: 64 EHVIPQLVAVEENPDIRGLLVILNTVGGDVEAGLALAEMIASMSKPSVSIVLGGGHSIGV 123
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + I +G + + + + K++ R+ ++ +
Sbjct: 124 TLAVSTSYSFIAHTATMTI----HPIRLTGLVIGVPQTYEYLDKMQDRVVRFVTEHSKVS 179
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ + + RD ++ +A D G++D+V
Sbjct: 180 ESQFRELMFRTGELARDIGTVLVGKDAVDIGLIDEV 215
>gi|225181409|ref|ZP_03734853.1| peptidase S14 ClpP [Dethiobacter alkaliphilus AHT 1]
gi|225167990|gb|EEG76797.1| peptidase S14 ClpP [Dethiobacter alkaliphilus AHT 1]
Length = 255
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 81 EHVIPQLVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMVDTLSKPTVSLVLGGGHSIGV 140
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + + SG + + + + K++ R+ + K+ T
Sbjct: 141 PIAVSADYSFITETATMTV----HPIRLSGLVIGVPQTYEYLDKMQDRVIKFVTKHSRVT 196
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
++ + RD +M +A G++D+V
Sbjct: 197 EDKFRHLMFCTDQLARDIGTVMVGPDAVKDGLIDEV 232
>gi|308173642|ref|YP_003920347.1| protein export-enhancing factor [Bacillus amyloliquefaciens DSM 7]
gi|307606506|emb|CBI42877.1| protein export-enhancing factor [Bacillus amyloliquefaciens DSM 7]
gi|328553426|gb|AEB23918.1| protein export-enhancing factor [Bacillus amyloliquefaciens TA208]
Length = 245
Score = 46.2 bits (108), Expect = 0.003, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 128 PIAVSCDHSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVNFVTNHSNIS 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A D+G++D V
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAADYGLIDAV 219
>gi|312961504|ref|ZP_07776005.1| clp protease [Pseudomonas fluorescens WH6]
gi|311284183|gb|EFQ62763.1| clp protease [Pseudomonas fluorescens WH6]
Length = 185
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 23/176 (13%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEA-ENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
E ++ QI+ + L+A E + L +++ GG G +Y ++ +
Sbjct: 3 EHVIHFHCQIDQGTTERF--RDCCLDAIEEGASSLLLNLSTTGGSTNFGFTLYTFLKALP 60
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ G SMG +L A + R P++R L+H + FS + D +R + +
Sbjct: 61 VPLCAINAGNIESMGIILFLAANR--RITAPHSRFLIHPMNWYFSQNSVDHQRLREYLSS 118
Query: 161 IKRRLN---EIYVKNCGKTYEEVEKTLDRDHI--MSASE-------ACDWGVVDKV 204
+ L +IY E ++ D +SA E + +G+ +V
Sbjct: 119 LDNDLARYVKIY------ELETLQAETQLDIFKCLSAEEKVIAAHESLAYGIAHEV 168
>gi|328911782|gb|AEB63378.1| protein export-enhancing factor [Bacillus amyloliquefaciens LL3]
Length = 249
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 72 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 132 PIAVSCDHSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVVNFVTNHSNIS 187
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A D+G++D V
Sbjct: 188 EEKFKELMFSKGNLTRDIGTNVVGKDAADYGLIDAV 223
>gi|70732065|ref|YP_261821.1| Clp protease [Pseudomonas fluorescens Pf-5]
gi|68346364|gb|AAY93970.1| clp protease, putative [Pseudomonas fluorescens Pf-5]
Length = 185
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 39/176 (22%), Positives = 69/176 (39%), Gaps = 23/176 (13%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEA-ENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
E IV QI+ + + L+A E + L +++ GG G +Y ++ +
Sbjct: 3 EHIVHFHCQIDQSTSERF--RDSCLQAIEEGASSLLLNLSTTGGSTNFGFTLYTFLKSLP 60
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P+ G SMG +L A + R P++R L+H + FS + D +R + +
Sbjct: 61 VPLCAINAGNIESMGIILFLAANR--RITTPHSRFLIHPMNWYFSQNSVDHQRLREYLSS 118
Query: 161 IKRRLN---EIYVKNCGKTYEEVEKTLDRDHI--MSASE-------ACDWGVVDKV 204
+ L +IY E D +SA E + +G+ +V
Sbjct: 119 LDNDLARYVKIY------EIETAAAETQLDIFKCLSAEEKVIAAHESLAYGIAHEV 168
>gi|170289952|ref|YP_001736768.1| Short-chain alcohol dehydrogenase [Candidatus Korarchaeum
cryptofilum OPF8]
gi|170174032|gb|ACB07085.1| Short-chain alcohol dehydrogenase [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 425
Score = 45.8 bits (107), Expect = 0.004, Method: Composition-based stats.
Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 15/162 (9%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+TG I + +L AEN + L IN+ GG A +I D + K P+ +
Sbjct: 30 ITGYISPATVEQV--KLAVKTAENGYSALVLQINTFGGQSDATFSIIDLILASKVPVIGY 87
Query: 107 CM---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
GQA S G+ +L A + P + I QP G++ ++ +
Sbjct: 88 VYPEGGQALSAGTYILMATD--YAAMSPYSTIGSAQPVVGYTP-----LNESKYLNAYAT 140
Query: 164 RLNEIYVKNC-GKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
++ + ++ E+ ++ + M A EA G++D V
Sbjct: 141 KMRSYAAMHGRNQSAAELMVLSNK-NFM-ADEALKVGLIDSV 180
>gi|311068202|ref|YP_003973125.1| TepA protein [Bacillus atrophaeus 1942]
gi|310868719|gb|ADP32194.1| TepA [Bacillus atrophaeus 1942]
Length = 245
Score = 45.8 bits (107), Expect = 0.005, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 71/174 (40%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 68 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + + T
Sbjct: 128 PIAVSCDYSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQDRVVKFVTSHSNVT 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV------LMSRIDIEEKSK 216
E+ ++ + RD + +A D+G++D V + + E++K
Sbjct: 184 EEKFKELMFSKGNLTRDIGTNVVGKDAADYGLIDDVGGVGQAIKKLNQLIEEAK 237
>gi|326202158|ref|ZP_08192028.1| peptidase S49 [Clostridium papyrosolvens DSM 2782]
gi|325987953|gb|EGD48779.1| peptidase S49 [Clostridium papyrosolvens DSM 2782]
Length = 251
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 61/156 (39%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 69 EHIIPQLVAIEESKQIEGLLLVLNTVGGDVEAGLAISEMVSSLSKPTVSLVLGGGHSIGV 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + K++ R+ + G
Sbjct: 129 PMAVSANHSFIASSATMTI----HPIRMNGLVIGVPQTYEYFDKMQERVVNFVCSHSGIK 184
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E+ + + D ++ EA G++D+V
Sbjct: 185 REKFRELMLKTGELANDVGTVLFGEEATQSGLIDQV 220
>gi|327401777|ref|YP_004342616.1| hypothetical protein Arcve_1908 [Archaeoglobus veneficus SNP6]
gi|327317285|gb|AEA47901.1| protein of unknown function DUF107 [Archaeoglobus veneficus SNP6]
Length = 427
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 63/168 (37%), Gaps = 7/168 (4%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G I + A + + L E + + I++PGG+VT+ +I + P+ T+
Sbjct: 33 IKGDINEGTAIQV-SNAFKLAEEVNADAVLIVIDTPGGLVTSMKSIVTEILQSDIPVITY 91
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
SA + + + S G + + I +
Sbjct: 92 V------HPPGAFSASAGSFILISGHIAAMSNGTSVGAATPITPIGAAENKTINYLANYA 145
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + G+ + E+ + ++A EA + GVVD + S+ ++ K
Sbjct: 146 KSIAEVRGRPVDIAERFVTEGLSLTAREAYEKGVVDVIADSKGELFSK 193
>gi|331091074|ref|ZP_08339916.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405296|gb|EGG84832.1| hypothetical protein HMPREF9477_00559 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 226
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 54 EHLLPKLAEVEDSEEIEGLLILLNTLGGDVEAGLAIAEMIASLSKPSVSLVLGGSHSIGG 113
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ + + R+ + ++ +
Sbjct: 114 PLAVSAD--YSFIVPSGTMVIHPVRSS--GTFIGVMQSYRNMERTQNRITKFISEHANIS 169
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ EA G++D+V
Sbjct: 170 QERIEELMLDPTQLVKDVGTMLEGEEAVKEGLIDEV 205
>gi|304316850|ref|YP_003851995.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778352|gb|ADL68911.1| peptidase S14 ClpP [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 233
Score = 45.4 bits (106), Expect = 0.005, Method: Composition-based stats.
Identities = 36/156 (23%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 61 EHIIPQLVAIEENPQIKGLLILLNTVGGDVEAGLAIAEMISSLSKPTVSIVLGGGHSIGV 120
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F +P+A + +H +G + + K++ R+ E ++N
Sbjct: 121 PL--AVSSNYSFIVPSATMTIHPIR--MTGLVIGVPQTFDYFNKMQDRIVEFVIRNSRIK 176
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ + D I+ EA D+G++D+V
Sbjct: 177 RDAFMNLMLKIGELANDVGTILVGKEAVDYGLIDEV 212
>gi|326791245|ref|YP_004309066.1| peptidase S14 ClpP [Clostridium lentocellum DSM 5427]
gi|326542009|gb|ADZ83868.1| peptidase S14 ClpP [Clostridium lentocellum DSM 5427]
Length = 279
Score = 45.4 bits (106), Expect = 0.006, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 76/177 (42%), Gaps = 22/177 (12%)
Query: 45 VFVTGQIEDHMA----------TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
+ + GQ+E HM+ I Q++ L + K I + +N+ GG V AG+A+ +
Sbjct: 84 ITIIGQVEGHMSLPPQNKTTKYEHIIPQMVGLCDDPKIKGILIILNTVGGDVEAGLALAE 143
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERH 154
+ + P + +G A S+G + A + F P A + +H +G +++
Sbjct: 144 LIASVNKPTVSLVLGGAHSIGVPIAVASD--YSFITPTATMTIHPVR--MNGTVIGVQQT 199
Query: 155 AQDIVKIKRRLNEIYVKNCGKTYEEVEKTL------DRD--HIMSASEACDWGVVDK 203
+ +++ R+ +N ++ + RD I+ EA D ++D+
Sbjct: 200 FEFFDQMQERIVAFVARNSHIEETRFKELMLSVGKLARDVGTILVGQEAVDEKIIDE 256
>gi|170758843|ref|YP_001786833.1| prophage LambdaBa02, Clp protease family protein [Clostridium
botulinum A3 str. Loch Maree]
gi|169405832|gb|ACA54243.1| prophage LambdaBa02, Clp protease family protein [Clostridium
botulinum A3 str. Loch Maree]
Length = 187
Score = 45.0 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 8/124 (6%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPP---ISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+YINS GG V A I +Q K I++ G AS S L + + +
Sbjct: 1 MYINSCGGSVIATQGIIAMLQRAKDKGVTINSTIDGLGASCSSFLPLIADNVYAYNS--S 58
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKI-KRRLNEIYVKNC--GKTYEEVEKTLDRDHIM 190
+++H+P G A +++ + + KI + IY+ G T + ++ + ++ +
Sbjct: 59 MLMIHKPFTFAVGNADELKAQIEVLDKIENNVMMPIYMSKAKEGITEDHIKDLVAKETWL 118
Query: 191 SASE 194
SA E
Sbjct: 119 SAKE 122
>gi|291563562|emb|CBL42378.1| Protease subunit of ATP-dependent Clp proteases [butyrate-producing
bacterium SS3/4]
Length = 224
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 67/154 (43%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L +E++ + + +N+ GG V+ G+A+ + + + P + +G + S+G
Sbjct: 56 EHILPELAKVESDEKIGGVLILVNTIGGDVSCGLALAEMIASLSKPTVSLVIGDSHSIGV 115
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + F +P +L+H SG + + I+ R+ ++
Sbjct: 116 PLAVASD--YSFIVPTGTMLVHPVR--MSGMVIGTAQTYEYFEMIEERIISFVSEHSRID 171
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVD 202
E++++ + +++ EA + G++D
Sbjct: 172 REKMKRLMHNTKMLTKDLGTVLVGKEAVECGLID 205
>gi|228956403|ref|ZP_04118222.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228803274|gb|EEM50074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 121
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSAS 193
++H+P +G A D+ + A+D+ I+ + +Y +N G EE+++ +D + +S
Sbjct: 1 MIHKPWTYAAGNAIDLRKAAEDLDNIETGIMNVYKENLKEGIEIEEIQQLVDAETWLSGE 60
Query: 194 EACDW 198
EA +
Sbjct: 61 EAEKY 65
>gi|323705387|ref|ZP_08116962.1| peptidase S14 ClpP [Thermoanaerobacterium xylanolyticum LX-11]
gi|323535289|gb|EGB25065.1| peptidase S14 ClpP [Thermoanaerobacterium xylanolyticum LX-11]
Length = 232
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 36/174 (20%), Positives = 73/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E K + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 61 EHIIPQLVAIEENPQIKGLLILLNTVGGDVEAGLAIAEMISSLSKPTVSIVLGGGHSIGV 120
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F +P+A + +H +G + + K++ R+ E ++N
Sbjct: 121 PL--AVSSNYSFIVPSATMTIHPIR--MTGLVIGVPQTFDYFNKMQDRIVEFVIRNSRIK 176
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV------LMSRIDIEEKSK 216
+ + D I+ EA D+G++D+V + + ++ +
Sbjct: 177 RDAFMNLMLKIGELANDVGTILVGKEAVDYGLIDEVGGVSEAIEKLQQLIKEKE 230
>gi|284161288|ref|YP_003399911.1| hypothetical protein Arcpr_0167 [Archaeoglobus profundus DSM 5631]
gi|284011285|gb|ADB57238.1| protein of unknown function DUF107 [Archaeoglobus profundus DSM
5631]
Length = 416
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 12/171 (7%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G+I L+ Q L + + + +++PGG++++ I T+ P+ T+
Sbjct: 27 IKGEINQGTVELV-RQGFDLAMRENAQAVLIVLDTPGGLLSSTKEIVSTIMNSGIPVITY 85
Query: 107 CM--GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+AS G+++L +G + + + S G + E +
Sbjct: 86 VPKGAFSASAGTIILLSG---------HISAMANGTSLGSATPVGLSEEEKNKTINYVAS 136
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
E + G+ E V+K + ++A EA + GV+D + SR ++ EK+
Sbjct: 137 YLESIAEARGRPKEIVKKFVTEGISLTAREAYEKGVIDILADSREELFEKA 187
>gi|160898904|ref|YP_001564486.1| hypothetical protein Daci_3465 [Delftia acidovorans SPH-1]
gi|160364488|gb|ABX36101.1| hypothetical protein Daci_3465 [Delftia acidovorans SPH-1]
Length = 140
Score = 45.0 bits (105), Expect = 0.007, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 20/59 (33%)
Query: 139 QPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
Q G D+ A + + +Y G E +DR+ + A +A D
Sbjct: 61 QRLAVAVGNRHDMTDTAAVLAPFDAAMAALYAHRSGIAEAEAAMLMDRETWIGAQQAVD 119
>gi|56963977|ref|YP_175708.1| translocation-enhancing protein TepA [Bacillus clausii KSM-K16]
gi|56910220|dbj|BAD64747.1| translocation-enhancing protein TepA [Bacillus clausii KSM-K16]
Length = 243
Score = 45.0 bits (105), Expect = 0.008, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+A+ + + I P T +G S+G
Sbjct: 67 EHMIPQLVAVEQNPKIEGLLIILNTVGGDVEAGLALSEMIASISKPTVTLVLGGGHSIGV 126
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ +A I +G + + + + K++ R+ + +
Sbjct: 127 PIATAASYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQDRVIRFVTSHSQIS 182
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + ++A ++G++++V
Sbjct: 183 EEKFKELMFSKGNLTRDIGTNVIGTDAVEYGLINEV 218
>gi|158320570|ref|YP_001513077.1| peptidase S14 ClpP [Alkaliphilus oremlandii OhILAs]
gi|158140769|gb|ABW19081.1| peptidase S14 ClpP [Alkaliphilus oremlandii OhILAs]
Length = 245
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + K + + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 76 EHIIPQLVAVEEDPKIKGLLVILNTMGGDVEAGLAIAELIGSLSKPTVTLVIGGGHSIGV 135
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +AG+ F P A + +H +G I + + +K++ R+ ++
Sbjct: 136 PLATAGD--YSFIAPTATMTIHPIR--MNGLVIGIPQTFRYFLKMQERIINFVLRTSNVE 191
Query: 177 YEEVEKTLD------RD--HIMSASEACDWGVVDKV 204
E ++ D I+ EA G++D+V
Sbjct: 192 RETFTSLMNATDELANDVGTILIGEEAVHHGLIDEV 227
>gi|153812753|ref|ZP_01965421.1| hypothetical protein RUMOBE_03160 [Ruminococcus obeum ATCC 29174]
gi|149831113|gb|EDM86202.1| hypothetical protein RUMOBE_03160 [Ruminococcus obeum ATCC 29174]
Length = 243
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + + +N+ GG V AG+AI + + + P + +G
Sbjct: 71 EHVLPKLAMIEDDENVEGLLILLNTVGGDVEAGLAIAEMIASLSIPTVSLVLG--GGHSI 128
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A FA+P+A +++H G + + +++ KI+ R+ + +
Sbjct: 129 GVPMAVSADYSFAVPSATMVIHPVRSS--GMFIGVAQTYRNMEKIQDRITGFIAAHSRAS 186
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ EA G++D++
Sbjct: 187 QERLEELMLDTSQLVKDVGTLLEGEEAVKEGLIDEI 222
>gi|312144009|ref|YP_003995455.1| protein of unknown function DUF107 [Halanaerobium sp.
'sapolanicus']
gi|311904660|gb|ADQ15101.1| protein of unknown function DUF107 [Halanaerobium sp.
'sapolanicus']
Length = 445
Score = 44.6 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 26/179 (14%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G+I + I L EAE ++ I + INS GG V + I D + I TF
Sbjct: 49 LEGEINIAQYSFINDALTKAEAEGAEEFI-IEINSLGGYVDPALRIRDRIFNSPLRIITF 107
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
G+A S +LL G++ + G A + + I +++
Sbjct: 108 VNGRAWSAAALLALTGDEIYISSG------------SSIGAAETRPQEEKYISALRKEFA 155
Query: 167 EIYVKNCGKTYE----------EVEKTLDRDHIMS--ASEACDWGVVDKVLMSRIDIEE 213
+ G+ + E+E ++R+ +++ A EA + G+ D + + ++ E
Sbjct: 156 AT-AERTGRNGQIAEAMVDSDLEIESIIEREKLLTLTAREAVELGMADFIAENLNELSE 213
>gi|225567906|ref|ZP_03776931.1| hypothetical protein CLOHYLEM_03979 [Clostridium hylemonae DSM
15053]
gi|225163194|gb|EEG75813.1| hypothetical protein CLOHYLEM_03979 [Clostridium hylemonae DSM
15053]
Length = 232
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ L +E + + + +N+ GG V AG++I + + + P + +G + S+G
Sbjct: 56 EHLLPMLAEVEDSEEIEGMLILLNTLGGDVEAGLSIAEMIASLSKPTVSLVLGGSHSIGG 115
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F +P+ +++H G +E+ +++++ + R+ K+ +
Sbjct: 116 PL--AVSAQYSFIVPSGTMIIHPVRSS--GMFIGVEQSLRNMLRTQDRITRFLSKHSNMS 171
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +EK + D ++ +A G++D+V
Sbjct: 172 QERIEKLMLNPTELVKDVGTLLEGEDAVKEGLIDEV 207
>gi|209965644|ref|YP_002298559.1| ATP-dependent Clp protease proteolytic subunit 2, putative
[Rhodospirillum centenum SW]
gi|209959110|gb|ACI99746.1| ATP-dependent Clp protease proteolytic subunit 2, putative
[Rhodospirillum centenum SW]
Length = 208
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 12/162 (7%)
Query: 46 FVTGQIEDHMATLICA-QLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ D + L+ A Q L E I L I S GG + AG+A ++ ++ + +
Sbjct: 36 FLRAVTNDSVCALLAACQTLMGEGVEH---IHLGIGSGGGGIVAGLAAFNQLRGLPLRFT 92
Query: 105 TFCMGQAASMGSLLLSAG-----EKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
T+ +G S+ L G + F Q +D
Sbjct: 93 TYNLGSVDSVAILPFLLGRERVADPWSTFLFHGVSWAFAANGEVAPSQVADAHACIASHE 152
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
++ L+ I G E+V + I++A EA G+
Sbjct: 153 RV---LSGITAACTGLPLEDVRRMRAASTIVAAEEAVALGIA 191
>gi|169334787|ref|ZP_02861980.1| hypothetical protein ANASTE_01193 [Anaerofustis stercorihominis DSM
17244]
gi|169257525|gb|EDS71491.1| hypothetical protein ANASTE_01193 [Anaerofustis stercorihominis DSM
17244]
Length = 272
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 35/156 (22%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I ++ +E ++ K + L +N+ GG V AG+AI + + + P T +G + S+G
Sbjct: 70 EHIIPMIIDVEEKDEIKGVLLILNTMGGDVEAGLAISELISGMSKPCVTLVLGGSHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +G F +P A +++H +G + + K++ R+ E V++
Sbjct: 130 PLAVSGS--YSFIVPTATMMIHPIR--TTGLVIGVLQSFLYFQKMQERITEFVVEHSNVD 185
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E K + D ++ +A + G++D V
Sbjct: 186 KELFNKIMLNTDELVNDMGSVLVGEQAVEIGLIDAV 221
>gi|152976162|ref|YP_001375679.1| peptidase S14 ClpP [Bacillus cereus subsp. cytotoxis NVH 391-98]
gi|152024914|gb|ABS22684.1| peptidase S14 ClpP [Bacillus cytotoxicus NVH 391-98]
Length = 250
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSYIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|330896142|gb|EGH28363.1| peptidase S14 ClpP [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 183
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 32/167 (19%), Positives = 64/167 (38%), Gaps = 8/167 (4%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
++ T I + + L E +++ I + GG + G +Y+ + + P
Sbjct: 4 HVINFTAPITSATCGQLIDR-SSLAIERGASCLAVNIATMGGECSYGFTMYNFLLSLPIP 62
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD--IERHAQDIVK 160
+ T +G SMG+++ AGE+ +++ L H SG + +A +
Sbjct: 63 VHTHNLGTVESMGNIVFLAGERRTACV--HSKFLFHPFHWHVSGSVDHSRMSEYAMSLDY 120
Query: 161 IKRRLNEIYVKNCGKTYE--EVEK-TLDRDHIMSASEACDWGVVDKV 204
+ I + E ++EK I+ +A GV+ V
Sbjct: 121 DLQLYARIVAERTVDAREVLDIEKYLTAAPRIIDPQQALVTGVIHAV 167
>gi|253578408|ref|ZP_04855680.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850726|gb|EES78684.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 234
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + + +N+ GG V AG+AI + + + P + +G
Sbjct: 65 EHVLPKLAIIEDDEEIEGLLILLNTVGGDVEAGLAIAEMIASLSIPTVSLVLG--GGHSI 122
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A FA+P+A +++H G + + +++ KI+ R+ ++ +
Sbjct: 123 GVPMAVSADYSFAVPSATMVIHPVRSN--GMFIGVAQTYRNMEKIQDRITTFISEHSKAS 180
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ +E+ + D ++ EA G++D+V
Sbjct: 181 QKRLEELMLDTSQLVKDVGTMLEGKEAVKEGLIDEV 216
>gi|153816437|ref|ZP_01969105.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756]
gi|317500190|ref|ZP_07958422.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087582|ref|ZP_08336512.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846225|gb|EDK23143.1| hypothetical protein RUMTOR_02690 [Ruminococcus torques ATCC 27756]
gi|316898405|gb|EFV20444.1| translocation-enhancing protein TepA [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400453|gb|EGG80086.1| hypothetical protein HMPREF1025_00095 [Lachnospiraceae bacterium
3_1_46FAA]
Length = 235
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/180 (16%), Positives = 75/180 (41%), Gaps = 25/180 (13%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E ++ + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 57 EHLLPRLAQIEEDDETDGVLILLNTLGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P +++H G + + +++ K + R+ + + T
Sbjct: 117 PLAVSAD--YSFIVPTGTMIVHPVRST--GMFIGVMQSYRNMEKTQDRITKFIASHSNIT 172
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV-------------LMSRIDIEEKS 215
+ + + + D ++ +A G++D+V + + +EK+
Sbjct: 173 QDRLLELMLDSSQLVKDVGTMLEGEQAVKEGMIDEVGGIKEAFAKLHSLIDKEKEKQEKN 232
>gi|291618509|ref|YP_003521251.1| Hypothetical Protein PANA_2956 [Pantoea ananatis LMG 20103]
gi|291153539|gb|ADD78123.1| Hypothetical Protein PANA_2956 [Pantoea ananatis LMG 20103]
Length = 178
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 29/132 (21%), Positives = 52/132 (39%), Gaps = 9/132 (6%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEK----GMRFALPN 132
LYI+SPGG + AG Y ++ P++T S +++ +K G L +
Sbjct: 29 LYISSPGGDIDAGKIGYQVVKNSPIPVTTVNASSVESSATMIYCGAQKRQVMGDSIFLLH 88
Query: 133 ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL---DRDHI 189
A + + P S D + + + + IY T E++EK D +
Sbjct: 89 APTVGNAPRSNVSENMLD--EKTEFTSRYRNMIKTIYQSCTHLTDEQIEKITYSEDNHKL 146
Query: 190 MSASEACDWGVV 201
+ +A G+
Sbjct: 147 LDNKQALATGIA 158
>gi|117624540|ref|YP_853453.1| hypothetical protein APECO1_4214 [Escherichia coli APEC O1]
gi|218559264|ref|YP_002392177.1| Clp protease [Escherichia coli S88]
gi|300935777|ref|ZP_07150741.1| Clp protease [Escherichia coli MS 21-1]
gi|301029851|ref|ZP_07192883.1| Clp protease [Escherichia coli MS 196-1]
gi|115513664|gb|ABJ01739.1| hypothetical protein APECO1_4214 [Escherichia coli APEC O1]
gi|218366033|emb|CAR03778.1| putative Clp protease [Escherichia coli S88]
gi|299877308|gb|EFI85519.1| Clp protease [Escherichia coli MS 196-1]
gi|300459048|gb|EFK22541.1| Clp protease [Escherichia coli MS 21-1]
gi|323948766|gb|EGB44665.1| hypothetical protein ERKG_04777 [Escherichia coli H252]
Length = 178
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQ-KEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + + Q L A + E++++I+S GG AG Y+ ++ + +
Sbjct: 7 FLC-PVNTATVGQL--QNHCLTALSQGATELNIHISSQGGETAAGFTAYNFLKSLPVTVR 63
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T + S+ +++ AG + RFA P +R LLH F+ A+D R + +
Sbjct: 64 THNISNVESIANIVFLAGSE--RFANPLSRFLLHPLLWCFASPAADHARLREYGKCLDND 121
Query: 165 LNEIYVKN-----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
L+ + + I+ A++A + G+++ + +R
Sbjct: 122 LDRFVETFNIDIGTHIRWASLIADS---TILDANKALEHGIINSIKTAR 167
>gi|228943547|ref|ZP_04105982.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|228973794|ref|ZP_04134371.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228980349|ref|ZP_04140660.1| Translocation-enhancing protein tepA [Bacillus thuringiensis Bt407]
gi|228779454|gb|EEM27710.1| Translocation-enhancing protein tepA [Bacillus thuringiensis Bt407]
gi|228785946|gb|EEM33948.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar thuringiensis str. T01001]
gi|228816134|gb|EEM62324.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar berliner ATCC 10792]
gi|326941508|gb|AEA17404.1| translocation-enhancing protein tepA [Bacillus thuringiensis
serovar chinensis CT-43]
Length = 249
Score = 44.6 bits (104), Expect = 0.009, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229098266|ref|ZP_04229213.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-29]
gi|228685164|gb|EEL39095.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-29]
Length = 249
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229104359|ref|ZP_04235028.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-28]
gi|228679057|gb|EEL33265.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-28]
Length = 249
Score = 44.6 bits (104), Expect = 0.010, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229162732|ref|ZP_04290689.1| Translocation-enhancing protein tepA [Bacillus cereus R309803]
gi|228620614|gb|EEK77483.1| Translocation-enhancing protein tepA [Bacillus cereus R309803]
Length = 249
Score = 44.2 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229031427|ref|ZP_04187427.1| Translocation-enhancing protein tepA [Bacillus cereus AH1271]
gi|228729716|gb|EEL80696.1| Translocation-enhancing protein tepA [Bacillus cereus AH1271]
Length = 249
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229117283|ref|ZP_04246661.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-3]
gi|228666183|gb|EEL21647.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-3]
Length = 249
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAIAEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|75764280|ref|ZP_00743823.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218898895|ref|YP_002447306.1| clp protease [Bacillus cereus G9842]
gi|228902298|ref|ZP_04066457.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL
4222]
gi|228909621|ref|ZP_04073444.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL
200]
gi|228966741|ref|ZP_04127785.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar sotto str. T04001]
gi|74488232|gb|EAO51905.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|218544679|gb|ACK97073.1| clp protease [Bacillus cereus G9842]
gi|228792840|gb|EEM40398.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar sotto str. T04001]
gi|228849910|gb|EEM94741.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL
200]
gi|228857335|gb|EEN01836.1| Translocation-enhancing protein tepA [Bacillus thuringiensis IBL
4222]
Length = 249
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|163941483|ref|YP_001646367.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4]
gi|229012979|ref|ZP_04170144.1| Translocation-enhancing protein tepA [Bacillus mycoides DSM 2048]
gi|229061399|ref|ZP_04198744.1| Translocation-enhancing protein tepA [Bacillus cereus AH603]
gi|229134603|ref|ZP_04263413.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST196]
gi|229168535|ref|ZP_04296258.1| Translocation-enhancing protein tepA [Bacillus cereus AH621]
gi|163863680|gb|ABY44739.1| peptidase S14 ClpP [Bacillus weihenstephanensis KBAB4]
gi|228614941|gb|EEK72043.1| Translocation-enhancing protein tepA [Bacillus cereus AH621]
gi|228648864|gb|EEL04889.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST196]
gi|228717822|gb|EEL69470.1| Translocation-enhancing protein tepA [Bacillus cereus AH603]
gi|228748233|gb|EEL98093.1| Translocation-enhancing protein tepA [Bacillus mycoides DSM 2048]
Length = 249
Score = 44.2 bits (103), Expect = 0.011, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDGV 221
>gi|229018991|ref|ZP_04175833.1| Translocation-enhancing protein tepA [Bacillus cereus AH1273]
gi|229025236|ref|ZP_04181658.1| Translocation-enhancing protein tepA [Bacillus cereus AH1272]
gi|228736064|gb|EEL86637.1| Translocation-enhancing protein tepA [Bacillus cereus AH1272]
gi|228742319|gb|EEL92477.1| Translocation-enhancing protein tepA [Bacillus cereus AH1273]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|228947517|ref|ZP_04109807.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123310|ref|ZP_04252514.1| Translocation-enhancing protein tepA [Bacillus cereus 95/8201]
gi|228660086|gb|EEL15722.1| Translocation-enhancing protein tepA [Bacillus cereus 95/8201]
gi|228812037|gb|EEM58368.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|154502755|ref|ZP_02039815.1| hypothetical protein RUMGNA_00569 [Ruminococcus gnavus ATCC 29149]
gi|153796638|gb|EDN79058.1| hypothetical protein RUMGNA_00569 [Ruminococcus gnavus ATCC 29149]
Length = 229
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E ++ + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 59 EHLIPRLAEVEDDDEVDGVLILLNTLGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 118
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ K + R+ + T
Sbjct: 119 PLAVSAD--YSFIVPSGTMIVHPVRSS--GMFIGVIQSYRNMEKTQDRITRFIAAHSQIT 174
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ +A G++D+V
Sbjct: 175 KERLEELMLDSTQLVKDVGTMLEGEDAVREGMIDEV 210
>gi|30021886|ref|NP_833517.1| translocation-enhancing protein tepA [Bacillus cereus ATCC 14579]
gi|218234620|ref|YP_002368598.1| clp protease [Bacillus cereus B4264]
gi|228922511|ref|ZP_04085812.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
gi|228954073|ref|ZP_04116102.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228960002|ref|ZP_04121667.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|229047482|ref|ZP_04193072.1| Translocation-enhancing protein tepA [Bacillus cereus AH676]
gi|229071295|ref|ZP_04204518.1| Translocation-enhancing protein tepA [Bacillus cereus F65185]
gi|229081051|ref|ZP_04213562.1| Translocation-enhancing protein tepA [Bacillus cereus Rock4-2]
gi|229111268|ref|ZP_04240821.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-15]
gi|229129072|ref|ZP_04258045.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-Cer4]
gi|229151996|ref|ZP_04280192.1| Translocation-enhancing protein tepA [Bacillus cereus m1550]
gi|229180074|ref|ZP_04307418.1| Translocation-enhancing protein tepA [Bacillus cereus 172560W]
gi|29897442|gb|AAP10718.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 14579]
gi|218162577|gb|ACK62569.1| clp protease [Bacillus cereus B4264]
gi|228603283|gb|EEK60760.1| Translocation-enhancing protein tepA [Bacillus cereus 172560W]
gi|228631551|gb|EEK88184.1| Translocation-enhancing protein tepA [Bacillus cereus m1550]
gi|228654309|gb|EEL10174.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-Cer4]
gi|228672044|gb|EEL27335.1| Translocation-enhancing protein tepA [Bacillus cereus Rock1-15]
gi|228702255|gb|EEL54730.1| Translocation-enhancing protein tepA [Bacillus cereus Rock4-2]
gi|228711749|gb|EEL63701.1| Translocation-enhancing protein tepA [Bacillus cereus F65185]
gi|228723729|gb|EEL75084.1| Translocation-enhancing protein tepA [Bacillus cereus AH676]
gi|228799745|gb|EEM46697.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pakistani str. T13001]
gi|228805639|gb|EEM52229.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|228837106|gb|EEM82446.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar huazhongensis BGSC 4BD1]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229174462|ref|ZP_04301994.1| Translocation-enhancing protein tepA [Bacillus cereus MM3]
gi|228609022|gb|EEK66312.1| Translocation-enhancing protein tepA [Bacillus cereus MM3]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229191921|ref|ZP_04318891.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 10876]
gi|228591472|gb|EEK49321.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 10876]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|47569067|ref|ZP_00239756.1| translocation-enhancing protein tepA [Bacillus cereus G9241]
gi|228986940|ref|ZP_04147066.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229157374|ref|ZP_04285452.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 4342]
gi|47554229|gb|EAL12591.1| translocation-enhancing protein tepA [Bacillus cereus G9241]
gi|228626101|gb|EEK82850.1| Translocation-enhancing protein tepA [Bacillus cereus ATCC 4342]
gi|228772718|gb|EEM21158.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 249
Score = 44.2 bits (103), Expect = 0.012, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|229146367|ref|ZP_04274738.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST24]
gi|296504293|ref|YP_003665993.1| translocation-enhancing protein TepA [Bacillus thuringiensis
BMB171]
gi|228637000|gb|EEK93459.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST24]
gi|296325345|gb|ADH08273.1| translocation-enhancing protein tepA [Bacillus thuringiensis
BMB171]
Length = 249
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLILNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|42782881|ref|NP_980128.1| hypothetical protein BCE_3831 [Bacillus cereus ATCC 10987]
gi|42738808|gb|AAS42736.1| conserved hypothetical protein [Bacillus cereus ATCC 10987]
gi|324327690|gb|ADY22950.1| hypothetical protein YBT020_18610 [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 249
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|167758267|ref|ZP_02430394.1| hypothetical protein CLOSCI_00605 [Clostridium scindens ATCC 35704]
gi|167664164|gb|EDS08294.1| hypothetical protein CLOSCI_00605 [Clostridium scindens ATCC 35704]
Length = 241
Score = 44.2 bits (103), Expect = 0.013, Method: Composition-based stats.
Identities = 28/136 (20%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ +N+ GG V AG++I + + + P + +G + S+G L A F +P+ ++
Sbjct: 85 ILLNTMGGDVEAGLSIAEMIASLSKPTVSLVLGGSHSIGGPL--AVSAKYSFIVPSGTMI 142
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL--------DRDH 188
+H G +E+ +++++ + R+ ++ T E +E+ + D
Sbjct: 143 IHPVRSN--GMFIGVEQSLRNMIRTQDRITRFLSQHSHMTQERIEELMLNPTELVKDVGT 200
Query: 189 IMSASEACDWGVVDKV 204
++ EA G++D+V
Sbjct: 201 LLEGEEAVKEGLIDEV 216
>gi|49479417|ref|YP_037857.1| translocation-enhancing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|225865776|ref|YP_002751154.1| clp protease [Bacillus cereus 03BB102]
gi|228935095|ref|ZP_04097923.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|49330973|gb|AAT61619.1| translocation-enhancing protein [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|225788341|gb|ACO28558.1| clp protease [Bacillus cereus 03BB102]
gi|228824565|gb|EEM70369.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
Length = 249
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|262872|gb|AAB24780.1| stress protein G7=ClpP homolog {N-terminal} [Bacillus subtilis,
IS58, Peptide Partial, 21 aa]
Length = 21
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 19/21 (90%)
Query: 16 LGLVPMVVEQTNRGERSYDIY 36
+ L+P V+EQTNRGER+YDIY
Sbjct: 1 MNLIPTVIEQTNRGERAYDIY 21
>gi|52141692|ref|YP_085137.1| translocation-enhancing protein [Bacillus cereus E33L]
gi|118479016|ref|YP_896167.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|196034190|ref|ZP_03101600.1| clp protease [Bacillus cereus W]
gi|196038350|ref|ZP_03105659.1| clp protease [Bacillus cereus NVH0597-99]
gi|196044682|ref|ZP_03111917.1| clp protease [Bacillus cereus 03BB108]
gi|206978174|ref|ZP_03239055.1| clp protease [Bacillus cereus H3081.97]
gi|217961217|ref|YP_002339785.1| clp protease [Bacillus cereus AH187]
gi|218904924|ref|YP_002452758.1| clp protease [Bacillus cereus AH820]
gi|222097242|ref|YP_002531299.1| translocation-enhancing protein [Bacillus cereus Q1]
gi|228916434|ref|ZP_04080001.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928846|ref|ZP_04091878.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|229092838|ref|ZP_04223972.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-42]
gi|229140438|ref|ZP_04268993.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST26]
gi|229186034|ref|ZP_04313204.1| Translocation-enhancing protein tepA [Bacillus cereus BGSC 6E1]
gi|229197907|ref|ZP_04324623.1| Translocation-enhancing protein tepA [Bacillus cereus m1293]
gi|301055286|ref|YP_003793497.1| peptidase S14 ClpP [Bacillus anthracis CI]
gi|51975161|gb|AAU16711.1| translocation-enhancing protein [Bacillus cereus E33L]
gi|118418241|gb|ABK86660.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|195993264|gb|EDX57222.1| clp protease [Bacillus cereus W]
gi|196024717|gb|EDX63389.1| clp protease [Bacillus cereus 03BB108]
gi|196030758|gb|EDX69356.1| clp protease [Bacillus cereus NVH0597-99]
gi|206743591|gb|EDZ55017.1| clp protease [Bacillus cereus H3081.97]
gi|217066012|gb|ACJ80262.1| clp protease [Bacillus cereus AH187]
gi|218538614|gb|ACK91012.1| clp protease [Bacillus cereus AH820]
gi|221241300|gb|ACM14010.1| translocation-enhancing protein [Bacillus cereus Q1]
gi|228585625|gb|EEK43727.1| Translocation-enhancing protein tepA [Bacillus cereus m1293]
gi|228597453|gb|EEK55103.1| Translocation-enhancing protein tepA [Bacillus cereus BGSC 6E1]
gi|228642999|gb|EEK99275.1| Translocation-enhancing protein tepA [Bacillus cereus BDRD-ST26]
gi|228690460|gb|EEL44243.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-42]
gi|228830653|gb|EEM76258.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843237|gb|EEM88318.1| Translocation-enhancing protein tepA [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|300377455|gb|ADK06359.1| peptidase S14 ClpP [Bacillus cereus biovar anthracis str. CI]
Length = 249
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLLVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|170706783|ref|ZP_02897241.1| clp protease [Bacillus anthracis str. A0389]
gi|170128201|gb|EDS97070.1| clp protease [Bacillus anthracis str. A0389]
Length = 249
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLIVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|150390425|ref|YP_001320474.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF]
gi|149950287|gb|ABR48815.1| peptidase S14, ClpP [Alkaliphilus metalliredigens QYMF]
Length = 254
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+A+ + + + P T +G S+G
Sbjct: 78 EHVIPQLMTVEQNPNVEGMLVILNTAGGDVEAGLALSELINTLSKPTVTLVLGGGHSIGV 137
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L +AG+ F P+A + +H +G + + Q K++ R+ + V N
Sbjct: 138 PLATAGD--YSFIAPSATMTIHPIR--MTGLVIGVPQTFQYFSKMQDRIIDFVVNNSNVD 193
Query: 177 YEEVEKTLD------RD--HIMSASEACDWGVVDKV 204
+ + ++ D I+ +A ++D+V
Sbjct: 194 KDIFIELMNTTDELANDVGTILIGEDAVKHKLIDEV 229
>gi|30263799|ref|NP_846176.1| hypothetical protein BA_3932 [Bacillus anthracis str. Ames]
gi|47529224|ref|YP_020573.1| hypothetical protein GBAA_3932 [Bacillus anthracis str. 'Ames
Ancestor']
gi|49186646|ref|YP_029898.1| hypothetical protein BAS3647 [Bacillus anthracis str. Sterne]
gi|65321124|ref|ZP_00394083.1| COG0740: Protease subunit of ATP-dependent Clp proteases [Bacillus
anthracis str. A2012]
gi|165872618|ref|ZP_02217249.1| clp protease [Bacillus anthracis str. A0488]
gi|167635861|ref|ZP_02394170.1| clp protease [Bacillus anthracis str. A0442]
gi|167639876|ref|ZP_02398145.1| clp protease [Bacillus anthracis str. A0193]
gi|170687843|ref|ZP_02879057.1| clp protease [Bacillus anthracis str. A0465]
gi|177652109|ref|ZP_02934655.1| clp protease [Bacillus anthracis str. A0174]
gi|190568387|ref|ZP_03021294.1| clp protease [Bacillus anthracis Tsiankovskii-I]
gi|227813295|ref|YP_002813304.1| clp protease [Bacillus anthracis str. CDC 684]
gi|229601887|ref|YP_002868036.1| clp protease [Bacillus anthracis str. A0248]
gi|254683496|ref|ZP_05147356.1| clp protease [Bacillus anthracis str. CNEVA-9066]
gi|254722017|ref|ZP_05183806.1| clp protease [Bacillus anthracis str. A1055]
gi|254735835|ref|ZP_05193541.1| clp protease [Bacillus anthracis str. Western North America
USA6153]
gi|254739639|ref|ZP_05197333.1| clp protease [Bacillus anthracis str. Kruger B]
gi|254755988|ref|ZP_05208019.1| clp protease [Bacillus anthracis str. Vollum]
gi|254759351|ref|ZP_05211376.1| clp protease [Bacillus anthracis str. Australia 94]
gi|30258443|gb|AAP27662.1| clp protease [Bacillus anthracis str. Ames]
gi|47504372|gb|AAT33048.1| clp protease [Bacillus anthracis str. 'Ames Ancestor']
gi|49180573|gb|AAT55949.1| conserved hypothetical protein [Bacillus anthracis str. Sterne]
gi|164711650|gb|EDR17196.1| clp protease [Bacillus anthracis str. A0488]
gi|167512277|gb|EDR87654.1| clp protease [Bacillus anthracis str. A0193]
gi|167528818|gb|EDR91576.1| clp protease [Bacillus anthracis str. A0442]
gi|170668159|gb|EDT18908.1| clp protease [Bacillus anthracis str. A0465]
gi|172082478|gb|EDT67543.1| clp protease [Bacillus anthracis str. A0174]
gi|190560391|gb|EDV14369.1| clp protease [Bacillus anthracis Tsiankovskii-I]
gi|227006134|gb|ACP15877.1| clp protease [Bacillus anthracis str. CDC 684]
gi|229266295|gb|ACQ47932.1| clp protease [Bacillus anthracis str. A0248]
Length = 249
Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQIVAIEQNPKIEGLLIVLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGGDAVKYGLIDDV 221
>gi|325116827|emb|CBZ52380.1| hypothetical protein NCLIV_021680 [Neospora caninum Liverpool]
Length = 771
Score = 43.9 bits (102), Expect = 0.015, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 20/33 (60%)
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
G+ + ++++ +++A EA +G+VD VL
Sbjct: 729 TGRPEASLRLDIEKEKLLTAEEARVYGLVDAVL 761
>gi|261367425|ref|ZP_05980308.1| Clp protease [Subdoligranulum variabile DSM 15176]
gi|282570193|gb|EFB75728.1| Clp protease [Subdoligranulum variabile DSM 15176]
Length = 239
Score = 43.9 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 26/155 (16%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + + +N+ GG V AG+A+ + + + P +T +G
Sbjct: 70 EHVIPQLVDIEEDPEIEGLLVILNTVGGDVEAGLALAELIAGVSKPSATLVLG--GGHSI 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P A + +H G + + + +++ R+ + G T
Sbjct: 128 GIPLAVSARRSFIVPTATMTVHPVRHS--GMVLGVPQTLRYFEQMQERIVGFVAGHSGIT 185
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDK 203
+ D ++ +A + G++D+
Sbjct: 186 ARRFTTLMHNTGELVMDMGTVLDGRQAVEEGLIDE 220
>gi|304404310|ref|ZP_07385972.1| peptidase S14 ClpP [Paenibacillus curdlanolyticus YK9]
gi|304347288|gb|EFM13120.1| peptidase S14 ClpP [Paenibacillus curdlanolyticus YK9]
Length = 249
Score = 43.9 bits (102), Expect = 0.016, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 61/157 (38%), Gaps = 14/157 (8%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ E + I + +N+ GG V AG+AI + + + P T +G S+G
Sbjct: 71 EHLIPQLVAAEQNPKIEGILIVLNTVGGDVEAGLAIAEMISSLTKPTVTLVLGGGHSIGV 130
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 131 PIAVSANRSFIAESATMTI----HPIRLNGLVIGVPQTFEYLDKMQERVVRFVTSHSNIS 186
Query: 177 YEEVEKTL------DRD---HIMSASEACDWGVVDKV 204
+ ++ + RD ++ A A G++D V
Sbjct: 187 EQLFKELMFKTGELTRDIGTTVIGAD-AVKHGLIDAV 222
>gi|281418096|ref|ZP_06249116.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
JW20]
gi|281409498|gb|EFB39756.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
JW20]
Length = 326
Score = 43.9 bits (102), Expect = 0.017, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIK----PPISTFCMGQAASMGSLLLSAGEK------ 124
I LY+NSPGG V +Y ++ K P+ T+ QA S G + A +K
Sbjct: 96 ILLYVNSPGGGVYESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRN 155
Query: 125 ------GMRFALPNAR----------ILLHQPSGGFSGQAS-DIERHAQDIVK-----IK 162
G+ +L N + I + G A ++ +DI++
Sbjct: 156 AWTGSIGVIISLTNLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAY 215
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ EI + T EEV++ D I+SA +A + ++D++ +++E
Sbjct: 216 EQFVEIVAEGRKMTVEEVKRIADG-RILSAKQALELNLIDEIATY-DEVKEA 265
>gi|18313592|ref|NP_560259.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2]
gi|18161137|gb|AAL64441.1| protease IV, conjectural [Pyrobaculum aerophilum str. IM2]
Length = 548
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 29/171 (16%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ + L+ + I L INSPGG V+A A+Y T+ I G AAS
Sbjct: 57 DKLISALIAVAQRGDVAGIVLLINSPGGTVSATEALYTTVAGINKTKYAVVNGLAASGAY 116
Query: 117 LLLSAGEKGMRFALPNARI-----LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY-- 169
+ A E+ +A P++ + + + D + R L + Y
Sbjct: 117 YVAVATER--IYATPSSWVGSIGVIAVMWPEEYFYDIPDYIYTTGPLKYYGRELTDYYND 174
Query: 170 ----------------VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + E I +A +A + G+VD++
Sbjct: 175 IERVRLNFVQAVLKGRAGRIKASPDVFETAS----IFTADQAKELGLVDEI 221
>gi|291545835|emb|CBL18943.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus sp.
SR1/5]
Length = 237
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 30/156 (19%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + + +N+ GG V AG+AI + + + P + +G
Sbjct: 65 EHVLPKLALIEDDEEIEGLLILLNTVGGDVEAGLAIAEMIASLSIPTVSLVLG--GGHSI 122
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+A +++H G + + +++ KI+ R+ + T
Sbjct: 123 GVPMAVSADYSFIVPSATMVVHPVRQN--GMFIGVAQSYRNMEKIQDRIIAFVSGHSHIT 180
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ EA G++D+V
Sbjct: 181 AERMEELMLDTSQLVKDVGTMLEGEEAVKEGLIDEV 216
>gi|225416613|ref|ZP_03761802.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme
DSM 15981]
gi|225041859|gb|EEG52105.1| hypothetical protein CLOSTASPAR_05837 [Clostridium asparagiforme
DSM 15981]
Length = 293
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 70/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL +E ++ + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 124 DHVLPQLAQIEDDDTVDGLLVLLNTSGGDVDAGLAIAEMIASLSMPTVSLVLGGSHSIGV 183
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F +P+ +++H SG + + I+ R+ +
Sbjct: 184 PL--AVSTNYSFIVPSGTMMIHPVR--MSGMVIGSSQTYEYFAMIEDRILNFVESHARIA 239
Query: 177 YEEVEKTLD------RD--HIMSASEACDWGVVDKV 204
Y+++++ + RD ++ EA + G++D+V
Sbjct: 240 YDQLKELMHNTEMLTRDLGTVLVGKEAVEAGLIDEV 275
>gi|210612604|ref|ZP_03289395.1| hypothetical protein CLONEX_01597 [Clostridium nexile DSM 1787]
gi|210151529|gb|EEA82536.1| hypothetical protein CLONEX_01597 [Clostridium nexile DSM 1787]
Length = 236
Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 57 EHLLPKLAEVEDNEEIEGLLILLNTLGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ + + R+ + T
Sbjct: 117 PLAVSAD--YSFIVPSGTMIIHPVRSN--GMFIGVIQSYRNMERTQDRIIRFLAGHSHMT 172
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ EA G++D V
Sbjct: 173 QERIEELMLDSTQLVKDVGTLLEGEEAVKEGLIDAV 208
>gi|125973935|ref|YP_001037845.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
ATCC 27405]
gi|256005058|ref|ZP_05430029.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
DSM 2360]
gi|125714160|gb|ABN52652.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49
[Clostridium thermocellum ATCC 27405]
gi|255991026|gb|EEU01137.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
DSM 2360]
gi|316939864|gb|ADU73898.1| signal peptide peptidase SppA, 36K type [Clostridium thermocellum
DSM 1313]
Length = 326
Score = 43.5 bits (101), Expect = 0.019, Method: Composition-based stats.
Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 34/172 (19%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIK----PPISTFCMGQAASMGSLLLSAGEK------ 124
I LY+NSPGG V +Y ++ K P+ T+ QA S G + A +K
Sbjct: 96 ILLYVNSPGGGVYESDELYLKLKEYKEETGRPVWTYMSNQACSGGYYISMASDKVFSNRN 155
Query: 125 ------GMRFALPNAR----------ILLHQPSGGFSGQAS-DIERHAQDIVK-----IK 162
G+ +L N + I + G A ++ +DI++
Sbjct: 156 AWTGSIGVIISLTNLKGLYDNLGIKGIYITSGRNKAMGAADLELTDEQRDILQSLVDEAY 215
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ EI + T EEV++ D I+SA +A + ++D++ +++E
Sbjct: 216 EQFVEIVAEGRKMTVEEVKRIADG-RILSAKQALELNLIDEIATY-DEVKEA 265
>gi|295110105|emb|CBL24058.1| Protease subunit of ATP-dependent Clp proteases [Ruminococcus obeum
A2-162]
Length = 240
Score = 43.5 bits (101), Expect = 0.020, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + +N+ GG V AG+AI + + + P + +G
Sbjct: 64 EHVLPKLALIEDDKDVDGLLILLNTVGGDVEAGLAIAEMIASLSIPTVSLVLG--GGHSI 121
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A FA+P+A +++H G + + ++I KI+ R+ + G T
Sbjct: 122 GVPMAVSADYSFAVPSATMVIHPVRSS--GMFIGVAQSYRNIEKIQDRITGFIAAHSGTT 179
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E +E+ + D ++ EA G+++++
Sbjct: 180 QERLEELMLDTSQLVKDVGTMLEGREAVKEGLINEI 215
>gi|225028438|ref|ZP_03717630.1| hypothetical protein EUBHAL_02712 [Eubacterium hallii DSM 3353]
gi|224954236|gb|EEG35445.1| hypothetical protein EUBHAL_02712 [Eubacterium hallii DSM 3353]
Length = 228
Score = 43.5 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 24/183 (13%)
Query: 42 ERIVFVT--GQIE-DHMATLICA------QLLFLEAENPQKEI---SLYINSPGGVVTAG 89
+ I+F++ G+IE H+++ L L +EI L IN+ GG + G
Sbjct: 25 QHILFLSVIGEIEGHHLSSDRIKTTKYEHLLPLLTQVQDNQEIDGLFLLINTVGGDCSCG 84
Query: 90 MAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS 149
+A + + IK P + +G + S+G L A ++ F P A ++LH G
Sbjct: 85 LAAAEMIASIKKPTVSLVIGDSHSIGVPLSVAADR--TFIAPTATMILHPVRLN--GTII 140
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD--------HIMSASEACDWGVV 201
+ + I+ R+ + G +E+ + R I+ A + G++
Sbjct: 141 GAPQTFEYFRLIQDRIVTFVEAHTGVAKSRLERMMIRQGMMVKDLGTILVGKMAVEEGII 200
Query: 202 DKV 204
D+V
Sbjct: 201 DEV 203
>gi|218689445|ref|YP_002397657.1| putative Clp protease [Escherichia coli ED1a]
gi|218690202|ref|YP_002398414.1| putative Clp protease [Escherichia coli ED1a]
gi|218427009|emb|CAR07883.2| putative Clp protease [Escherichia coli ED1a]
gi|218427766|emb|CAR08677.2| putative Clp protease [Escherichia coli ED1a]
Length = 178
Score = 43.5 bits (101), Expect = 0.021, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 71/169 (42%), Gaps = 14/169 (8%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQ-KEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + + Q L A + E++++I+S GG AG Y+ ++ + +
Sbjct: 7 FLC-PVNTATVGQL--QNHCLTALSQGATELNIHISSQGGETAAGFTAYNFLKSLPVTVR 63
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T + S+ +++ AG + RFA P +R LLH F+ A+D R + +
Sbjct: 64 THNISNVESIANIVFLAGSE--RFANPLSRFLLHPLLWVFATPAADHARLREYGKCLDND 121
Query: 165 LNEIYVKN-----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
L+ + + I+ A++A + G+++ + +R
Sbjct: 122 LDRFVETFNIDIGTHIRWASLIADS---TILDANKALEHGIINSIKTAR 167
>gi|291279199|ref|YP_003496034.1| membrane-bound serine protease [Deferribacter desulfuricans SSM1]
gi|290753901|dbj|BAI80278.1| membrane-bound serine protease [Deferribacter desulfuricans SSM1]
Length = 426
Score = 43.5 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 61/168 (36%), Gaps = 10/168 (5%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G I + I + E ++ LY+N+PGG++T+ I ++ + P+ T
Sbjct: 42 IDGVISPVTSKFIEQTIKKCENKDGLI---LYLNTPGGLLTSTREIVQSIFTSQIPVITV 98
Query: 107 CM---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+A S GS ++ A I P F + I
Sbjct: 99 VSPPGARAGSAGSFIVLASH--YAIMFEGTNIGAAHPVSIFGKDID--GDMRKKIENDTI 154
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ + + E+ + +A EA + ++DKV+ + ++
Sbjct: 155 AFMKSIAEKRNRNIEKAISMVKDSKSYTAQEALKFKLIDKVVKNNQEL 202
>gi|237704834|ref|ZP_04535315.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|226901200|gb|EEH87459.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
gi|315288226|gb|EFU47625.1| Clp protease [Escherichia coli MS 110-3]
Length = 178
Score = 43.5 bits (101), Expect = 0.022, Method: Composition-based stats.
Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 14/169 (8%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQ-KEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
F+ + + Q L A + E++++I+S GG AG Y+ ++ + +
Sbjct: 7 FLC-PVNTATVGQL--QNHCLTALSQGATELNIHISSQGGETAAGFTAYNFLKSLPVTVR 63
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
T + S+ +++ AG + RFA P +R LLH GF+ A+D R + +
Sbjct: 64 THNISNVESIANIVFLAGSE--RFANPLSRFLLHPLLWGFASPAADHARLREYGKCLDND 121
Query: 165 LNEIYVKN-----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSR 208
L+ + + I+ A++A + G+++ + +R
Sbjct: 122 LDRFVETFNIDIGTHIRWASLIADS---TILDANKALEHGIINSIKTAR 167
>gi|78356487|ref|YP_387936.1| signal peptide peptidase A [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78218892|gb|ABB38241.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49
[Desulfovibrio desulfuricans subsp. desulfuricans str.
G20]
Length = 320
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 38/197 (19%), Positives = 68/197 (34%), Gaps = 41/197 (20%)
Query: 42 ERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
ER +F + + A+L E + + + L ++SPGG VT+ +Y+ + K
Sbjct: 58 ERGIFADKP---GLVQSVVARLRMAEMDPAVRAVILTVDSPGGSVTSSDVLYNEIMRFKQ 114
Query: 102 PISTFCM----------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGGFS 145
T + G S+ + + A G G F PN L+ +
Sbjct: 115 RTGTRVVALQMDMATSGGYYVSIAADRIIAHPSTITGSIGTIFMRPNVTGLMEKIGVQAV 174
Query: 146 ------------GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD------ 187
+ + + LN ++ K E + R+
Sbjct: 175 TTKSGAHKDIGSPFRENTPEEQAILQNMVTTLNSRFI----KLVSERRELQGRESSYSDA 230
Query: 188 HIMSASEACDWGVVDKV 204
IM+A EA + G+VD +
Sbjct: 231 RIMTAQEALELGLVDSI 247
>gi|228992486|ref|ZP_04152413.1| Translocation-enhancing protein tepA [Bacillus pseudomycoides DSM
12442]
gi|229002772|ref|ZP_04160674.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock3-17]
gi|229008526|ref|ZP_04165954.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock1-4]
gi|228752750|gb|EEM02350.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock1-4]
gi|228758487|gb|EEM07632.1| Translocation-enhancing protein tepA [Bacillus mycoides Rock3-17]
gi|228767120|gb|EEM15756.1| Translocation-enhancing protein tepA [Bacillus pseudomycoides DSM
12442]
Length = 249
Score = 43.1 bits (100), Expect = 0.028, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHVIPQIVAIEQNPKIEGLLLLLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGIDAVKYGLIDDV 221
>gi|229086348|ref|ZP_04218525.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-44]
gi|228696960|gb|EEL49768.1| Translocation-enhancing protein tepA [Bacillus cereus Rock3-44]
Length = 249
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHVIPQIVAIEQNPKIEGLLLLLNTVGGDVEAGLAISEMVASLSKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDYSFIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVIRFVTKHSKVT 185
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
+ ++ + RD + +A +G++D V
Sbjct: 186 EDRFKELMFAKGNLTRDIGTNVIGIDAVKYGLIDDV 221
>gi|160892565|ref|ZP_02073355.1| hypothetical protein CLOL250_00094 [Clostridium sp. L2-50]
gi|156865606|gb|EDO59037.1| hypothetical protein CLOL250_00094 [Clostridium sp. L2-50]
Length = 219
Score = 42.7 bits (99), Expect = 0.031, Method: Composition-based stats.
Identities = 38/187 (20%), Positives = 87/187 (46%), Gaps = 26/187 (13%)
Query: 36 YSRLLKERIVFVTGQIEDHMA----------TLICAQLLFLEAENPQKEISLYINSPGGV 85
Y+ LL + I+ G+IE H++ + +L ++ + K + + +N+ GG
Sbjct: 26 YNILLLD-II---GEIEGHVSLPSDTKTTKYEHVLPELAVVQDDESIKGVLVLLNTVGGD 81
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
V AG+AI + + I P+ T +G + S+G L +G+ + F +P A +++H S
Sbjct: 82 VEAGLAIAEMLASISKPVVTLVLGGSHSIGVPLAVSGD--VSFIVPTATMVVHPLR--VS 137
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL------DRDH--IMSASEACD 197
+ ++ + I +++ R+ + + + + + +D ++ EA
Sbjct: 138 DTVLGVRQNYEYIERMQDRIIQFTSCHSKIDEDSLRSIMFNTQELSKDIGSVLVGKEAVK 197
Query: 198 WGVVDKV 204
G++D++
Sbjct: 198 CGIIDRI 204
>gi|119872893|ref|YP_930900.1| peptidase S49 [Pyrobaculum islandicum DSM 4184]
gi|119674301|gb|ABL88557.1| peptidase S49 [Pyrobaculum islandicum DSM 4184]
Length = 550
Score = 42.7 bits (99), Expect = 0.036, Method: Composition-based stats.
Identities = 35/187 (18%), Positives = 58/187 (31%), Gaps = 45/187 (24%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G D + L L + I L INSPGG V+ +Y T+ +
Sbjct: 51 IGGPETD----KLVKALTELSQRDDVAGIVLVINSPGGTVSGTETLYTTLLGLNKTKYAV 106
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQ-----PSGGFSGQASDIERHAQDIVKI 161
+G AS A E+ +A P++ + + A+D +
Sbjct: 107 IVGLGASGAYYTAVAAER--IYAAPSSWVGSIGVVAVIWPDLYLYDAADYIYTTGPLKYY 164
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHI------------------------MSASEACD 197
L+ Y E++ R + +A EA
Sbjct: 165 GEDLHGYY-----DDVEKI-----RQNFVEAVLRGRAGRIKADPAVLETAGLFTAEEALK 214
Query: 198 WGVVDKV 204
G+VDK+
Sbjct: 215 LGLVDKI 221
>gi|225572062|ref|ZP_03780926.1| hypothetical protein RUMHYD_00356 [Blautia hydrogenotrophica DSM
10507]
gi|225040497|gb|EEG50743.1| hypothetical protein RUMHYD_00356 [Blautia hydrogenotrophica DSM
10507]
Length = 248
Score = 42.7 bits (99), Expect = 0.038, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + + +N+ GG V AG+AI + + + T +
Sbjct: 62 EHVLPKLAMIEDDQNVDGLLVLLNTVGGDVEAGLAIAEMI--ASLSVPTVSLVLGGGHSI 119
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+A +++H G + + +++ KI+ R+ + T
Sbjct: 120 GVPMAVSADYSFVVPSATMVIHPVRSN--GMFIGVAQTYRNMEKIQDRITSFIAGHSHIT 177
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ +E+ + D ++ +A G++D+V
Sbjct: 178 QQRLEELMLDTSQLVKDVGTMLEGEDAVREGLIDEV 213
>gi|293115362|ref|ZP_05791142.2| Clp protease [Butyrivibrio crossotus DSM 2876]
gi|292810238|gb|EFF69443.1| Clp protease [Butyrivibrio crossotus DSM 2876]
Length = 211
Score = 42.7 bits (99), Expect = 0.039, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 60/155 (38%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L+ +E + + IN+ GG V+AG+AI + + + P + +G++ S+G
Sbjct: 39 DEIIPRLVSIENNDDVDGVLFVINTMGGDVSAGLAIAEMIAGLSKPTVSLVIGESHSIGV 98
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A I +G + + I+ R+ ++
Sbjct: 99 PIAVAANYSFIVKSATVVI----HPVRMTGTILGTRQTYRQFRSIQDRIVRFISEHSRCG 154
Query: 177 YEEVEKTLDRD--------HIMSASEACDWGVVDK 203
E +EK + I+ EA + G++D+
Sbjct: 155 EESIEKMMMDTSMMSSDLGTILVGEEAVEAGLIDE 189
>gi|294500881|ref|YP_003564581.1| translocation-enhancing protein TepA [Bacillus megaterium QM B1551]
gi|295706227|ref|YP_003599302.1| translocation-enhancing protein TepA [Bacillus megaterium DSM 319]
gi|294350818|gb|ADE71147.1| translocation-enhancing protein TepA [Bacillus megaterium QM B1551]
gi|294803886|gb|ADF40952.1| translocation-enhancing protein TepA [Bacillus megaterium DSM 319]
Length = 250
Score = 42.3 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 73 EHVIPQIVAIEQNPKIEGLLIILNTVGGDVEAGLAIAEMIASLSKPSVSIVLGGGHSIGV 132
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ ++ +
Sbjct: 133 PIAVSTDYSYIAGTATMTI----HPIRLTGLVIGVPQTFEYLDKMQERVINFVREHSHIS 188
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + +A +G++++V
Sbjct: 189 EEKFKELMFSKGNLTRDIGTNVVGGDAVSYGLINEV 224
>gi|325115976|emb|CBZ51530.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 278
Score = 42.3 bits (98), Expect = 0.044, Method: Composition-based stats.
Identities = 27/132 (20%), Positives = 50/132 (37%), Gaps = 26/132 (19%)
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS-DIERHAQDI 158
P +T +G A +LLL+ G +G R A NA I L P + ++ A+ +
Sbjct: 147 PPFCATVAVGLAWGTAALLLACGTRGFRAATRNASIALRFPRVSLGQGKTAELRSRAEAV 206
Query: 159 VKIKRRLNEIYVKNCGK-------------------------TYEEVEKTLDRDHIMSAS 193
+ +R E+ G T ++ + + + ++
Sbjct: 207 LSGQRAQAELLASLLGNAEKEKKREGGENEAQTESRTSDSNATVSDLLRLMRKGAFLTPE 266
Query: 194 EACDWGVVDKVL 205
EA D G++D +L
Sbjct: 267 EAQDLGIIDHIL 278
>gi|218660307|ref|ZP_03516237.1| hypothetical protein RetlI_12159 [Rhizobium etli IE4771]
Length = 19
Score = 42.3 bits (98), Expect = 0.045, Method: Composition-based stats.
Identities = 19/19 (100%), Positives = 19/19 (100%)
Query: 21 MVVEQTNRGERSYDIYSRL 39
MVVEQTNRGERSYDIYSRL
Sbjct: 1 MVVEQTNRGERSYDIYSRL 19
>gi|242240064|ref|YP_002988245.1| peptidase S14 ClpP [Dickeya dadantii Ech703]
gi|242132121|gb|ACS86423.1| peptidase S14 ClpP [Dickeya dadantii Ech703]
Length = 226
Score = 42.3 bits (98), Expect = 0.046, Method: Composition-based stats.
Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 9/158 (5%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAE-NPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
++ TG + H T + L + I LYINS GG + +G + Y ++ + P+
Sbjct: 38 MYFTGAVNQHNITELTTALDEANMRFKNAQAIYLYINSRGGEMDSGHSGYLAIRSSRIPV 97
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGF--SGQASDI-ERHAQDIVK 160
+T + S ++L + R L + I++H P G A D+ + H Q +
Sbjct: 98 TTVDLSVVGSAATMLFCGAQ--NRVMLKDTLIMIHAPKVGIGEKEAAPDMLDSHHQWMDN 155
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTL---DRDHIMSASEA 195
L IY + + +E+ + L D ++ +A
Sbjct: 156 YVGMLKNIYRECTSLSDDELRQRLYSEDNHLFLNNQDA 193
>gi|167769170|ref|ZP_02441223.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM
17241]
gi|167668810|gb|EDS12940.1| hypothetical protein ANACOL_00493 [Anaerotruncus colihominis DSM
17241]
Length = 240
Score = 42.3 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 69/154 (44%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QLL +E + + + + +N+ GG V AG+AI + + ++ P + +G S+G
Sbjct: 70 EHVIPQLLAVEQDPEIEGLVVILNTVGGDVEAGLAIAELLSGMRKPTVSLVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+A + +H +G + + +++ R+ + N +
Sbjct: 130 PLAVSARR--SFIVPSATMTVHPVR--MNGLVLGVPQTLSYFDRMQERIVKFVTDNSRIS 185
Query: 177 YEEVEK-TLDRD-------HIMSASEACDWGVVD 202
E + +++D ++ A D G++D
Sbjct: 186 PERFRQLMMNKDELVMDVGTVLDGQAAVDEGLID 219
>gi|205373589|ref|ZP_03226392.1| TepA [Bacillus coahuilensis m4-4]
Length = 250
Score = 42.3 bits (98), Expect = 0.049, Method: Composition-based stats.
Identities = 29/174 (16%), Positives = 72/174 (41%), Gaps = 18/174 (10%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 73 EHMIPQLVAIEQNPKIEGLLVILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 132
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ +A + I +G + + + + K++ R+ + + +
Sbjct: 133 PIATACDYSFIAETATMTI----HPVRLTGLVIGVPQTFEYMDKMQDRVVKFVTGHSNIS 188
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV------LMSRIDIEEKSK 216
E+ + + RD + +A +G++++V + ++ E+SK
Sbjct: 189 EEDFKDLMFAKGNLTRDIGTNVVGDDAVKYGLMNEVGGLGAAMKKLNELIEQSK 242
>gi|166031789|ref|ZP_02234618.1| hypothetical protein DORFOR_01490 [Dorea formicigenerans ATCC
27755]
gi|166028242|gb|EDR46999.1| hypothetical protein DORFOR_01490 [Dorea formicigenerans ATCC
27755]
Length = 228
Score = 41.9 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 27/136 (19%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ +N+ GG V AG++I + + I P + +G + S+G L A + F +P+ ++
Sbjct: 80 ILLNTMGGDVEAGLSIAEMIASISKPTVSLVLGGSHSIGGPLAVAAD--YSFIVPSGTMI 137
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL--------DRDH 188
+H G +++ Q++++ ++R+ + E +E+ + D
Sbjct: 138 IHPVRSN--GMFIGVQQSLQNMIRTQKRITGFLAAHSHMNEERIEELMLNPTELVKDVGT 195
Query: 189 IMSASEACDWGVVDKV 204
++ +A G++D+V
Sbjct: 196 LLEGEDAVREGLIDEV 211
>gi|23099067|ref|NP_692533.1| translocation enhancing protein [Oceanobacillus iheyensis HTE831]
gi|22777295|dbj|BAC13568.1| translocation enhancing protein [Oceanobacillus iheyensis HTE831]
Length = 244
Score = 41.9 bits (97), Expect = 0.056, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ +E + + + +N+ GG V AG+A+ + + + P + +G S+G
Sbjct: 68 EHLLPQLIAIEQNPKIEGLVILLNTVGGDVEAGLALAEMISSLSKPTVSIVLGGGHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A + F +P A + +H G + + + + K++ R+ + V +
Sbjct: 128 PIAVATD--HSFIVPTATMTIHPIRLT--GLVIGVPQTFEYLDKMQERVIDFVVHHSNIK 183
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + ++A ++G+++ V
Sbjct: 184 EEKFKELMFAQGNLTRDIGTNVVGADAVEFGLINDV 219
>gi|325661480|ref|ZP_08150105.1| hypothetical protein HMPREF0490_00839 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472196|gb|EGC75409.1| hypothetical protein HMPREF0490_00839 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 232
Score = 41.9 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 62 EHLLPKLAEIEDNEEIDGVLILLNTMGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 121
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ + + R+ ++ +
Sbjct: 122 PLAVSAD--YSFIVPSGTMIVHPVRST--GMFIGVLQSYKNMERTQDRITRFLAEHSRIS 177
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E VE+ + D ++ +A G++D V
Sbjct: 178 QERVEELMLDSTQLVKDVGTLLEGEDAVREGLIDAV 213
>gi|167949878|ref|ZP_02536952.1| hypothetical protein Epers_26827 [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 52
Score = 41.9 bits (97), Expect = 0.063, Method: Composition-based stats.
Identities = 16/20 (80%), Positives = 19/20 (95%)
Query: 16 LGLVPMVVEQTNRGERSYDI 35
LGLVP+V+EQT RGERS+DI
Sbjct: 15 LGLVPIVIEQTARGERSFDI 34
>gi|118431752|ref|NP_148417.2| serine protease [Aeropyrum pernix K1]
gi|116063074|dbj|BAA81162.2| serine protease [Aeropyrum pernix K1]
Length = 503
Score = 41.9 bits (97), Expect = 0.064, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 61/168 (36%), Gaps = 3/168 (1%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
I+ + G I++ M + + E EN + +N+PGG V A + ++ + P+
Sbjct: 91 IIRIEGTIDNAMMDYLKQSIERAEEENAVL--IVELNTPGGFVDAATEMVVSISKARIPV 148
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+ + + A ++ + + + + ++ I I +
Sbjct: 149 VGYVVEKWAESAGTMILMSTHIAAMQPGTIIGSVQPIAYDPTTGSYQPVLDSKIINPIVK 208
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
L E V L D+ A EA + GV+D + R ++
Sbjct: 209 TLCEHGATRGRNPEALVRFVLYNDNY-GAEEALEKGVIDLIARDRSEL 255
>gi|295103105|emb|CBL00649.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Faecalibacterium prausnitzii SL3/3]
Length = 227
Score = 41.5 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 23/155 (14%), Positives = 59/155 (38%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ ++ + + + + +N+ GG V G+A+ + + I P +T +G
Sbjct: 59 EHVIPQLVAVQEDPRIEGLLVLLNTVGGDVETGLALAELIASISKPSATLVLG--GGHSI 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P A + +H G + + ++++R+ + G
Sbjct: 117 GIPLAVSARHSFIVPTATMTVHPVRHS--GLILGVPQTMHCFEQMQQRITGFVAAHSGMP 174
Query: 177 YEEVEKT--------LDRDHIMSASEACDWGVVDK 203
+ + +D ++ A ++D+
Sbjct: 175 EKRYTQLMLHTGELVMDMGTVLDGRRAVKEKLIDE 209
>gi|14520866|ref|NP_126341.1| nodulation protein nfed [Pyrococcus abyssi GE5]
gi|5458083|emb|CAB49572.1| nfeD nodulation protein homolog, probable membrane protein
[Pyrococcus abyssi GE5]
Length = 440
Score = 41.5 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 55/167 (32%), Gaps = 14/167 (8%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ GQI + + E EN + I + ++PGG A M I +Q K P+ +
Sbjct: 29 IKGQITSYTYDQFDRYITIAE-ENNAEAIIIEFDTPGGRADAMMNIIQRIQQSKVPVIIY 87
Query: 107 CMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV------K 160
+A + + S G ++ I
Sbjct: 88 V------YPPGATAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKITN 141
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + G+ E+ + +D ++ EA +GV+ +V+
Sbjct: 142 HFIAYIKSLAQESGRNETIAEEFITKDLSLTPEEALKYGVI-EVIAR 187
>gi|291536145|emb|CBL09257.1| Protease subunit of ATP-dependent Clp proteases [Roseburia
intestinalis M50/1]
Length = 217
Score = 41.5 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L LE + + L +N+ GG V +G+AI + + I+ P + +G S
Sbjct: 49 EHVLPKLAELEDNPDTEGLLLLLNTVGGDVESGLAIAEMIASIRKPTVSLVLG--GSHSI 106
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+ +++H SG + +++ R+ + +
Sbjct: 107 GVPLAVSTDYSFIVPSGTMVIHPVR--MSGTVIGAKPTYDYFKQMQDRIVHFISTHSKAS 164
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ +E+ + +D I+ EA + G++++V
Sbjct: 165 EKRLEELMMNTGILTKDLGTILVGKEAVEEGLINEV 200
>gi|218262799|ref|ZP_03477157.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii
DSM 18315]
gi|218223131|gb|EEC95781.1| hypothetical protein PRABACTJOHN_02837 [Parabacteroides johnsonii
DSM 18315]
Length = 460
Score = 41.5 bits (96), Expect = 0.071, Method: Composition-based stats.
Identities = 29/154 (18%), Positives = 56/154 (36%), Gaps = 19/154 (12%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN--AR 134
+++N+ GG V A ++ + + P+ F AAS G+L+ A +K N A
Sbjct: 64 IHMNTYGGQVDAADSMRTAILYNSIPVYVFIDNNAASAGALISIACKKIYMRKGANIGAA 123
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEE----VEKTL--DR-- 186
+++Q + R + I KN + + + + +R
Sbjct: 124 TVVNQTGAAMPDKYQSYMRSMMRSTAEAHGQDTIIQKNDTLYKWKRDPLIAEAMVDERVA 183
Query: 187 -----DH----IMSASEACDWGVVDKVLMSRIDI 211
D +A EA WG D + + ++
Sbjct: 184 IPNLIDTGKVLTFTAQEAQKWGYCDGIAENPDEV 217
>gi|197303368|ref|ZP_03168407.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC
29176]
gi|197297366|gb|EDY31927.1| hypothetical protein RUMLAC_02090 [Ruminococcus lactaris ATCC
29176]
Length = 259
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 67/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L E + + + + +N+ GG V AG+ I + + + P + +G + S+G
Sbjct: 72 EHLLPRLAEAEENDEIEGVLILLNTMGGDVEAGLGIAEMIASLGKPTVSLVLGGSHSIGG 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ + + R+ + +
Sbjct: 132 PLAVSAD--YSFIVPSGTMIIHPVRSS--GMFIGVIQSYRNMERTQDRITRFIASHSHIS 187
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
E + + + D ++ EA G++D+V
Sbjct: 188 QERIVELMLDSTQLVKDVGTMLEGEEAVREGMIDEV 223
>gi|194015072|ref|ZP_03053689.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Bacillus pumilus ATCC 7061]
gi|194014098|gb|EDW23663.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Bacillus pumilus ATCC 7061]
Length = 242
Score = 41.5 bits (96), Expect = 0.072, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 65 EHVIPQIVAVEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 124
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + T
Sbjct: 125 PIAVSCDYSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVINFVTSHSNIT 180
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + EA ++G++++V
Sbjct: 181 EEKFKELMFSKGNLTRDIGTNVVGHEAAEYGLMNEV 216
>gi|160945600|ref|ZP_02092826.1| hypothetical protein FAEPRAM212_03129 [Faecalibacterium prausnitzii
M21/2]
gi|158443331|gb|EDP20336.1| hypothetical protein FAEPRAM212_03129 [Faecalibacterium prausnitzii
M21/2]
Length = 227
Score = 41.5 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 24/155 (15%), Positives = 60/155 (38%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL+ ++ + + + + +N+ GG V AG+A+ + + I P +T +G
Sbjct: 59 EHVIPQLVAVQEDPRIEGLLVLLNTVGGDVEAGLALAELIASISKPSATLVLG--GGHSI 116
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P A + +H G + + ++++R+ + G
Sbjct: 117 GIPLAVSARHSFIVPTATMTVHPVRHS--GLILGVPQTMHCFEQMQQRITGFVAAHSGMP 174
Query: 177 YEEVEKT--------LDRDHIMSASEACDWGVVDK 203
+ + +D ++ A ++D+
Sbjct: 175 EKRYTQLMLHTGELVMDMGTVLDGRRAVKEKLIDE 209
>gi|157692363|ref|YP_001486825.1| endopeptidase ClpP [Bacillus pumilus SAFR-032]
gi|157681121|gb|ABV62265.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
Length = 249
Score = 41.5 bits (96), Expect = 0.076, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 72 EHVIPQIVAVEQNPKIEGLLIILNTVGGDVEAGLAIAEMLASLSKPTVSIVLGGGHSIGV 131
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + T
Sbjct: 132 PIAVSCDYSYIAETATMTI----HPVRLTGLVIGVPQTFEYLDKMQERVINFVTSHSNIT 187
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
E+ ++ + RD + EA ++G++++V
Sbjct: 188 EEKFKELMFSKGNLTRDIGTNVVGHEAAEYGLMNEV 223
>gi|300933496|ref|ZP_07148752.1| Endopeptidase Clp [Corynebacterium resistens DSM 45100]
Length = 74
Score = 41.5 bits (96), Expect = 0.083, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 50/73 (68%)
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
+AIYDTM+FIKP I+T C+ QA S+G++LL+AG G R ALP+ARI+LHQP+ G
Sbjct: 1 MLAIYDTMKFIKPSIATTCVAQAVSVGAVLLTAGAPGKRAALPHARIVLHQPAAQSRGTI 60
Query: 149 SDIERHAQDIVKI 161
+ R + ++
Sbjct: 61 PHLIRDVNVLPRL 73
>gi|257414294|ref|ZP_04745868.2| Clp protease [Roseburia intestinalis L1-82]
gi|257200551|gb|EEU98835.1| Clp protease [Roseburia intestinalis L1-82]
gi|291538992|emb|CBL12103.1| Protease subunit of ATP-dependent Clp proteases [Roseburia
intestinalis XB6B4]
Length = 252
Score = 41.2 bits (95), Expect = 0.088, Method: Composition-based stats.
Identities = 28/156 (17%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L LE + + L +N+ GG V +G+AI + + I+ P + +G S
Sbjct: 84 EHVLPKLAELEDNPDTEGLLLLLNTVGGDVESGLAIAEMIASIRKPTVSLVLG--GSHSI 141
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+ +++H SG + +++ R+ + +
Sbjct: 142 GVPLAVSTDYSFIVPSGTMVIHPVR--MSGTVIGAKPTYDYFKQMQDRIVHFISTHSKAS 199
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV 204
+ +E+ + I++ EA + G++++V
Sbjct: 200 EKRLEELMMNTGILTKDLGTILVGKEAVEEGLINEV 235
>gi|228956209|ref|ZP_04118090.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228803468|gb|EEM50206.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 121
Score = 41.2 bits (95), Expect = 0.091, Method: Composition-based stats.
Identities = 15/76 (19%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 136 LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC--GKTYEEVEKTLDRDHIMSAS 193
++H+P G A+ + + A+D+ ++ + +Y +N G E +++ +D + +S
Sbjct: 1 MVHKPWTVSRGNANVLRKMAEDLDNLEAGIMNVYKENLKEGIEIEVIQQLVDAETWLSGE 60
Query: 194 EACDWGVVDKVLMSRI 209
EA + + +V+ ++
Sbjct: 61 EAEKYFNI-EVVEAKE 75
>gi|160880890|ref|YP_001559858.1| peptidase S14 ClpP [Clostridium phytofermentans ISDg]
gi|160429556|gb|ABX43119.1| peptidase S14 ClpP [Clostridium phytofermentans ISDg]
Length = 316
Score = 41.2 bits (95), Expect = 0.095, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 65/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL +E + + + IN+ GG V+ G+A+ + + + P + +G + S+G
Sbjct: 144 EHVLPQLATIEDDTETDGLLILINTVGGDVSCGLALAEMIASLSKPTVSLVIGDSHSIGV 203
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A F +P +++H SG + I+ R+ +
Sbjct: 204 PL--AVATNYSFIVPTGTMIVHPVR--MSGMVIGAPQTYDYFKLIQDRIVGFVSSHSKIK 259
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
E++E+ + +D I+ EA G++++V
Sbjct: 260 KEKLEQLMLNTGMLSKDLGTILVGDEAVAEGIINEV 295
>gi|255705108|emb|CBA13344.1| polyprotein [Cassava brown streak virus]
Length = 2916
Score = 41.2 bits (95), Expect = 0.096, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 54/162 (33%), Gaps = 8/162 (4%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQAASMGS 116
L ++ + + I +Y + + + I T C + +
Sbjct: 344 IENALVRKSWDELQHIEMYSFDLSWARSRDDFFKYFDEDVGRLIRTCCTPSTLWLYAKKA 403
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK 175
+ + P IL+ G + + ++ + ++ + +
Sbjct: 404 RFYKYVDHMILKGSPLVDILVKMEYVGIHLEMFNSVE--DVCLEYAHFMQDLIQDHVTDQ 461
Query: 176 TYEEVE--KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ E++ K L R + S EA + ++D+++ + +E +
Sbjct: 462 SNEDILRVKNLIRSYFDSVIEASKYELIDRIIDKKTQLEAQE 503
>gi|167464750|ref|ZP_02329839.1| peptidase S14 ClpP [Paenibacillus larvae subsp. larvae BRL-230010]
gi|322382330|ref|ZP_08056237.1| protein export-enhancing factor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
gi|321153683|gb|EFX46058.1| protein export-enhancing factor-like protein [Paenibacillus larvae
subsp. larvae B-3650]
Length = 248
Score = 41.2 bits (95), Expect = 0.097, Method: Composition-based stats.
Identities = 29/157 (18%), Positives = 62/157 (39%), Gaps = 14/157 (8%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ E + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 70 EHIIPQLVAAEQSTKIEGVLFILNTVGGDVEAGLAIAEMIATMSKPTVSIVLGGGHSIGV 129
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ K+ T
Sbjct: 130 PIAVSTDFTFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQDRVVRFVTKHSNVT 185
Query: 177 YEEVEKTL------DRD---HIMSASEACDWGVVDKV 204
E+ + + RD ++ A A +G+++ V
Sbjct: 186 EEQFKHLMFKTGELTRDIGTTVIGAD-AVRYGLINAV 221
>gi|326789880|ref|YP_004307701.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum
DSM 5427]
gi|326540644|gb|ADZ82503.1| signal peptide peptidase SppA, 36K type [Clostridium lentocellum
DSM 5427]
Length = 315
Score = 41.2 bits (95), Expect = 0.099, Method: Composition-based stats.
Identities = 36/193 (18%), Positives = 68/193 (35%), Gaps = 34/193 (17%)
Query: 45 VFVTGQIEDHMATL----ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
++V G I + ++ L + K I LY+NSPGG + +Y ++ K
Sbjct: 54 IYVQGTIAEGEMNYNHAWTINRINELMYDKQNKGIFLYVNSPGGGIYESDELYLKLKEYK 113
Query: 101 ----PPISTFCMGQAASMGSLLLSAGEKGMRFALPNA----------------------- 133
P+ + AAS G + A +K +
Sbjct: 114 EVTERPVYAYMAQTAASGGLYVCMAADKIYANRMTMTGSIGVIMSMTDTTGLQELLGIKT 173
Query: 134 -RILLHQPSGGFSGQASDIERHAQ-DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMS 191
I+ + + + + Q I + ++ +N T +V++ D S
Sbjct: 174 ENIVSGENKAMGNPLTDEQRQILQTMIDESYNIFVDVVAENRSLTEAKVKELADGRVY-S 232
Query: 192 ASEACDWGVVDKV 204
A +A D G++D+V
Sbjct: 233 ALQAKDLGLIDEV 245
>gi|331084957|ref|ZP_08334044.1| hypothetical protein HMPREF0987_00347 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408657|gb|EGG88122.1| hypothetical protein HMPREF0987_00347 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 229
Score = 41.2 bits (95), Expect = 0.10, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 68/156 (43%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 59 EHLLPKLAEIEDNEEIDGVLILLNTMGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGG 118
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H G + + +++ + + R+ ++ +
Sbjct: 119 PLAVSAD--YSFIVPSGTMIVHPVRST--GMFIGVLQSYKNMERTQDRITRFLAEHSRIS 174
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVDKV 204
+ VE+ + D ++ +A G++D V
Sbjct: 175 QDRVEELMLDSTQLVKDVGTLLEGEDAVREGLIDAV 210
>gi|15606868|ref|NP_214248.1| nodulation competitiveness protein NfeD [Aquifex aeolicus VF5]
gi|2984101|gb|AAC07639.1| nodulation competitiveness protein NfeD [Aquifex aeolicus VF5]
Length = 425
Score = 41.2 bits (95), Expect = 0.11, Method: Composition-based stats.
Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 15/178 (8%)
Query: 45 VFVT---GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP 101
+FV G I A + + + E I L +N+PGG+V + I + +
Sbjct: 18 IFVAQWEGPITPTTADYVERTIQKAQKEGGTLYILL-LNTPGGLVESMRKIIQSFETAPF 76
Query: 102 PISTFC--------MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIER 153
PI + A + ++A G + + Q +
Sbjct: 77 PIVVYVYPPGGRAASAGAIITIAADIAAMAPGTNIGAAHPVLATPQGREKKEKGK---DV 133
Query: 154 HAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ +++ K G+ + VEK + +SA EA GV+D + + D+
Sbjct: 134 MMEKVLQDMLAFVRAIAKEKGRNVKVVEKMVKESLSLSAEEALKKGVIDLIAYNLEDL 191
>gi|121535282|ref|ZP_01667096.1| peptidase S14, ClpP [Thermosinus carboxydivorans Nor1]
gi|121306167|gb|EAX47095.1| peptidase S14, ClpP [Thermosinus carboxydivorans Nor1]
Length = 260
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 28/155 (18%), Positives = 61/155 (39%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q+ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 84 EHVMPQIAAIEQNPDIEGLLLLLNTVGGDVEAGLAIAELIASLSKPTVSLVLGGGHSIGV 143
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + K++ R+N V + T
Sbjct: 144 PIAVSANYSFIVESASMTI----HPIRLTGLVIGAPSSFDYLEKMQERINRFVVSHSKIT 199
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDK 203
++ ++ L RD + +A +G++D+
Sbjct: 200 EKKWKELLFKTGELSRDIGTNVVGRDAVRYGLIDE 234
>gi|305662677|ref|YP_003858965.1| protein of unknown function DUF107 [Ignisphaera aggregans DSM
17230]
gi|304377246|gb|ADM27085.1| protein of unknown function DUF107 [Ignisphaera aggregans DSM
17230]
Length = 447
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 39/173 (22%), Positives = 66/173 (38%), Gaps = 6/173 (3%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
RI + G I D L L A + + + +NS GG + + + I D + K P
Sbjct: 41 RIDGIVGTI-DKPTEDYVRYALSL-ATDRGVPLIIIVNSYGGYLESTINIADILLNAKVP 98
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS-GQASDIERHAQDIVKI 161
+ F +A S S+++ + P I QP + ++ I I
Sbjct: 99 VIGFIADKAFSAASIVVQPMH--IVAITPYGVIGAAQPIQINPVTGQYEYVNESKVINSI 156
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L Y + G+ VE + R+ ++ EA + VVD + D+ K
Sbjct: 157 -VALATRYAEARGRNKTAVEMFIRRNLVLRGEEAVKYHVVDIIANDLDDLINK 208
>gi|89101082|ref|ZP_01173920.1| TepA [Bacillus sp. NRRL B-14911]
gi|89084194|gb|EAR63357.1| TepA [Bacillus sp. NRRL B-14911]
Length = 256
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 63/156 (40%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 79 EHLIPQIVAIEQNPKIEGLLVILNTVGGDVEAGLAISEMLASLSKPTVSIVLGGGHSIGV 138
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I +G + + + + K++ R+ + +
Sbjct: 139 PIAVSCDYSFIAETATMTI----HPIRLTGLVIGVPQTFEYLDKMQDRVINFVTGHSKVS 194
Query: 177 YEEVEKTL------DRDHIMS--ASEACDWGVVDKV 204
++ + + RD + ++A +G++D V
Sbjct: 195 EQQFKDLMFAKGNLTRDIGTNVVGADAVSYGLIDAV 230
>gi|332157739|ref|YP_004423018.1| nfeD protein [Pyrococcus sp. NA2]
gi|331033202|gb|AEC51014.1| nfeD protein [Pyrococcus sp. NA2]
Length = 439
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 30/165 (18%), Positives = 55/165 (33%), Gaps = 14/165 (8%)
Query: 49 GQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM 108
GQI + + E EN + I + +++PGG A M I +Q K P+ F
Sbjct: 32 GQITSYTYDQFDRYITIAE-ENNARAIIIELDTPGGRADAMMNIIQRIQQAKVPVIVFV- 89
Query: 109 GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV------KIK 162
++A + + S G ++ I
Sbjct: 90 -----YPPGAIAASAGTYIALGSHLIAMAPGTSIGACRPILGYAQNGSIIQAPPKIVNHY 144
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
+ + G+ EK + D ++ EA +GV+ +V+
Sbjct: 145 IAYIKSLAQESGRNVTIAEKFITEDLSLTPEEALKYGVI-EVIAR 188
>gi|296133921|ref|YP_003641168.1| protein of unknown function DUF107 [Thermincola sp. JR]
gi|296032499|gb|ADG83267.1| protein of unknown function DUF107 [Thermincola potens JR]
Length = 450
Score = 40.8 bits (94), Expect = 0.13, Method: Composition-based stats.
Identities = 39/177 (22%), Positives = 76/177 (42%), Gaps = 28/177 (15%)
Query: 43 RIVFV--TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
+IVF+ G+IE MA+ + L E + K++ I++PGG++ + I + +
Sbjct: 41 KIVFIPIKGEIEPGMASFVERSLDKAE-QMGAKKVVFEIDTPGGLIDSAQRIKTRIFNAQ 99
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVK 160
P F G+A S G L+ A E+ ++ G G A + + + +
Sbjct: 100 VPTVAFINGEAKSAGVLIALAAEE------------IYMTPGTAIGAAEPVPNNPKILAS 147
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHI------------MSASEACDWGVVDKVL 205
+ L E + G+ + V DR+ + ++A +A + G+ DK++
Sbjct: 148 WRSDLEEA-AEARGRNPKIVAGMADRNVVIENIKEKGEILSLTAKKAVELGIADKIV 203
>gi|258648041|ref|ZP_05735510.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259]
gi|260851896|gb|EEX71765.1| signal peptide peptidase SppA [Prevotella tannerae ATCC 51259]
Length = 587
Score = 40.8 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 31/196 (15%), Positives = 66/196 (33%), Gaps = 32/196 (16%)
Query: 52 EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ--FIKPPISTFCMG 109
++ + + L L ++ K + L +NS GG A I+ ++ K P+ G
Sbjct: 324 DEIVGNQVIQDLDELANDDNIKAVVLRVNSGGGSAYASEQIWHAVELLKKKKPVVVSMGG 383
Query: 110 QAASMGSLLLSAGEKGMR-------------FALPNARILLHQPSGGFS---------GQ 147
AAS G + +K + + ++ + F
Sbjct: 384 TAASGGYYISCGADKIIADPTTVTGSIGIFGMIPDFSGLMTEKLGLHFDIVKTNEASDFG 443
Query: 148 ASDIERHAQDIVKIKRRLNEIY-------VKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
A A + ++ +N Y KT E++ + + +A G+
Sbjct: 444 AMGRGMTAAEGEALQNYVNRGYGLFLKRVANGRNKTVEQINQVAQGRVW-TGRQALKLGL 502
Query: 201 VDKVLMSRIDIEEKSK 216
+D++ I+E ++
Sbjct: 503 IDQLGTLEDAIKEAAR 518
>gi|284990303|ref|YP_003408857.1| Rhodanese domain-containing protein [Geodermatophilus obscurus DSM
43160]
gi|284063548|gb|ADB74486.1| Rhodanese domain protein [Geodermatophilus obscurus DSM 43160]
Length = 335
Score = 40.8 bits (94), Expect = 0.15, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
+ + G+ E++E DR A +G VD V+ +
Sbjct: 1 MQSFHLGQPIEQIEPDSDR--CFPAQGPLAYGFVDHVVSRAATLP 43
>gi|238917241|ref|YP_002930758.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
gi|238872601|gb|ACR72311.1| ATP-dependent Clp protease, protease subunit [Eubacterium eligens
ATCC 27750]
Length = 236
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 31/156 (19%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ +L +E + K + +N+ GG V+AG+A+ + + +K P + +G + S+G
Sbjct: 68 EHMLPKLAEIEMDKDIKGVLFIMNTVGGDVSAGLALAEMIASMKKPTVSLIIGDSHSIGV 127
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P A +++H +G +++ +I R+ + +
Sbjct: 128 PLAVSTD--YSFIVPTATMIIHPVR--MNGTLIGVQQTYDYFERISDRITSFIATHSNVS 183
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV 204
E VEK + +S +A + G++ +V
Sbjct: 184 KERVEKMMVDTTQLSKDLGTVLVGRQAVEEGLICEV 219
>gi|153853725|ref|ZP_01995081.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814]
gi|149753475|gb|EDM63406.1| hypothetical protein DORLON_01072 [Dorea longicatena DSM 13814]
Length = 327
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 46/136 (33%), Gaps = 5/136 (3%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E ++ I Y+ +++ + +T +G S + + G+R+
Sbjct: 129 ETTKRPIWDYMAHYAASGGYMVSMASDKIYANSNTTTGSIGVIMSGYDMSGLYKKLGIRY 188
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
I + I + I + I + E+V+K D
Sbjct: 189 VS----ITSGKNKDSSKFTDEQIAIYQDQINEAYEEFVNIVADGRDMSVEDVKKLADGRT 244
Query: 189 IMSASEACDWGVVDKV 204
+A +A + G++D++
Sbjct: 245 Y-TAKQAKNNGLIDEI 259
>gi|254680857|gb|ACT78701.1| polyprotein [Cassava brown streak virus]
Length = 2916
Score = 40.4 bits (93), Expect = 0.19, Method: Composition-based stats.
Identities = 19/162 (11%), Positives = 55/162 (33%), Gaps = 8/162 (4%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQAASMGS 116
L ++ + ++I +Y + + + I T C + +
Sbjct: 344 IENALVRKSWDELQQIEMYSFDLSWARSRDDFFKYFDEDVGRLIRTCCTPTTLWLYAKKA 403
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKN-CGK 175
+ + P IL+ G + + ++ + ++ + +
Sbjct: 404 RFYKYVDHMILKGSPLVDILVKMEYVGKHLEMFNSVE--DVCLEYAHFMQDLIQDHVTDQ 461
Query: 176 TYEEVE--KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
+ E++ K L R + S EA + ++D+++ + +E +
Sbjct: 462 SNEDILRVKNLIRSYFDSVIEANKYELIDRIIDKKTQLEAQE 503
>gi|14591292|ref|NP_143370.1| nfeD protein [Pyrococcus horikoshii OT3]
gi|3257935|dbj|BAA30618.1| 441aa long hypothetical nfeD protein [Pyrococcus horikoshii OT3]
Length = 441
Score = 40.0 bits (92), Expect = 0.20, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 44 IVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
IV+ + GQI + + E ++ + I + +++PGG A M I +Q K
Sbjct: 23 IVYVAQIKGQITSYTYDQFDRYITIAE-QDNAEAIIIELDTPGGRADAMMNIVQRIQQSK 81
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV- 159
P+ + +A + + S G ++ I
Sbjct: 82 IPVIIYV------YPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEA 135
Query: 160 -----KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + G+ E+ + +D ++ EA +GV++ V ++ +K
Sbjct: 136 PPKITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLKK 195
Query: 215 S 215
S
Sbjct: 196 S 196
>gi|317132346|ref|YP_004091660.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3]
gi|315470325|gb|ADU26929.1| peptidase S14 ClpP [Ethanoligenens harbinense YUAN-3]
Length = 319
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 29/155 (18%), Positives = 64/155 (41%), Gaps = 12/155 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ Q++ +E + + + + +N+ GG V AG+AI + + +K P + +G S+G
Sbjct: 90 EHVIPQIVAVEEDPRIEGLLIVLNTVGGDVEAGLAIAELISGMKKPTVSLVLGGGHSIGV 149
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + F P A + +H +G + + K++ R+ + +N
Sbjct: 150 PLAICASE--SFIAPTATMTIHPVR--MNGIVVGVPQTLSYFDKMQDRIGKFVAQNSHIA 205
Query: 177 YEEVEKTLDRD--------HIMSASEACDWGVVDK 203
E ++ + ++ EA G++D
Sbjct: 206 PERFKELMMHTGELVLDVGTVLEGEEAVREGLIDH 240
>gi|308751714|gb|ADO45197.1| protein of unknown function DUF107 [Hydrogenobacter thermophilus
TK-6]
Length = 430
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 7/155 (4%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQAASMGS 116
+ L E L +N+PGG+ ++ I Q P+ F G+AAS G+
Sbjct: 42 IKRSLSKAEEEGGTLFVLELNTPGGLESSMREIVQEFQRTPLPVVVFVYPSGGRAASAGA 101
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++ + + + P I P G+ + + +++ K G+
Sbjct: 102 IITISAD--IAVMSPGTNIGAAHPVQMGGGEQDSVMKE--KVLQDALAFVRSIAKEKGRN 157
Query: 177 YEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
E VEK + ++ EA V+D + ++
Sbjct: 158 VEVVEKMVKESISLTPEEALKSRVIDMIATDMTEL 192
>gi|288818113|ref|YP_003432461.1| membrane-bound serine protease ClpP class [Hydrogenobacter
thermophilus TK-6]
gi|288787513|dbj|BAI69260.1| membrane-bound serine protease ClpP class [Hydrogenobacter
thermophilus TK-6]
Length = 438
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 7/155 (4%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQAASMGS 116
+ L E L +N+PGG+ ++ I Q P+ F G+AAS G+
Sbjct: 50 IKRSLSKAEEEGGTLFVLELNTPGGLESSMREIVQEFQRTPLPVVVFVYPSGGRAASAGA 109
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
++ + + + P I P G+ + + +++ K G+
Sbjct: 110 IITISAD--IAVMSPGTNIGAAHPVQMGGGEQDSVMKE--KVLQDALAFVRSIAKEKGRN 165
Query: 177 YEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
E VEK + ++ EA V+D + ++
Sbjct: 166 VEVVEKMVKESISLTPEEALKSRVIDMIATDMTEL 200
>gi|262341043|ref|YP_003283898.1| naphthoate synthase [Blattabacterium sp. (Blattella germanica) str.
Bge]
gi|262272380|gb|ACY40288.1| naphthoate synthase [Blattabacterium sp. (Blattella germanica) str.
Bge]
Length = 276
Score = 40.0 bits (92), Expect = 0.23, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 46/142 (32%), Gaps = 30/142 (21%)
Query: 78 YINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL 137
Y++ G + Y ++ I P+ G A G +L + + A NA
Sbjct: 88 YLDKNGVPRLNILEFYKKIREIPKPVIAMVNGYAVGGGHVLHVVCD--LTIASDNAIFSQ 145
Query: 138 HQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIM-----SA 192
P G ++ G+ R+ +A
Sbjct: 146 VGPKVGSFDGGFGCSY---------------LARHIGQKK-------TREMWFLCKKYTA 183
Query: 193 SEACDWGVVDKVLMSRIDIEEK 214
EA G+++KV+ SR +EE+
Sbjct: 184 KEALKMGLINKVV-SRKKLEEE 204
>gi|302874673|ref|YP_003843306.1| peptidase S49 [Clostridium cellulovorans 743B]
gi|307690713|ref|ZP_07633159.1| peptidase S49 [Clostridium cellulovorans 743B]
gi|302577530|gb|ADL51542.1| peptidase S49 [Clostridium cellulovorans 743B]
Length = 274
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 38/184 (20%), Positives = 74/184 (40%), Gaps = 24/184 (13%)
Query: 41 KERI--VFVTGQIEDHMA----------TLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
+ERI + + GQIE HM I Q++ +E + + + +N+ GG V A
Sbjct: 29 EERIAILPIIGQIEGHMVAPPQHKTTKYEHIIPQVVGIETNDKIEGALIILNTIGGDVEA 88
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
G+AI + + I P + +G S+G L +A + + +G
Sbjct: 89 GLAIAEMITSISKPTVSLVIGGGHSIGVPLATAAKYSYITTSATMIV----HPIRMNGTV 144
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCG-KTYEEVEKTLDRD-------HIMSASEACDWGV 200
+ + K++ R+ E V+ + + + D I+ +A + G+
Sbjct: 145 IGVPQTFDYFNKMQERIVEFVVRTSKVQRDSFISMMMKTDELLNDMGTILIGKQAVEKGL 204
Query: 201 VDKV 204
+D+V
Sbjct: 205 IDEV 208
>gi|9630469|ref|NP_046900.1| gp5 [Enterobacteria phage N15]
gi|3192688|gb|AAC19041.1| gp5 [Enterobacteria phage N15]
Length = 447
Score = 40.0 bits (92), Expect = 0.24, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 54/178 (30%), Gaps = 18/178 (10%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
V+G + I A++ K I N +A + + + T
Sbjct: 138 MVSGAFD---CADIIARM------RDIKPIWALANDMNCSAGQLIASSASRRLVTQTART 188
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
+G + + + G+ +L + + I ++
Sbjct: 189 GSIGVMMAHSNYGAALKTNGVEVSLIYSGDHKVDGNPYEKLPEDVRADFQTRIDATRQMF 248
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS-------RIDIEEKSK 216
E G + ++V + S E+ D G+ D+++ + R ++ + K
Sbjct: 249 AEKVSAYTGMSVQDVL-DTEAAVF-SGQESVDNGLADELVNNTDALGVMREALDRRKK 304
>gi|268608938|ref|ZP_06142665.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
flavefaciens FD-1]
Length = 228
Score = 40.0 bits (92), Expect = 0.25, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I L+ +E + + + + +N+ GG V AG+AI + + +K P + +G S+G
Sbjct: 55 EHIIPALVAVEQDRSVEGLLIILNTVGGDVEAGLAIAELISGMKTPTVSLVVGGGHSIGV 114
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + +K + I +G + + +++ R+ V N G +
Sbjct: 115 PLAVSAKKSFIVPSASMTI----HPVRMNGTVLGVPQTLSYFQRMQDRIVRFVVGNSGIS 170
Query: 177 YEEVEKTLDR--DHIMS------ASEACDWGVVD 202
E+ + + ++ +A + G++D
Sbjct: 171 EEDFRSLMMNTEELVLDVGSVVEGEKAVELGLID 204
>gi|332180395|gb|AEE16083.1| signal peptide peptidase SppA, 36K type [Treponema brennaborense
DSM 12168]
Length = 370
Score = 39.6 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 18/137 (13%), Positives = 39/137 (28%), Gaps = 2/137 (1%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + Y+ +A T +G + L + +K
Sbjct: 154 ETTGNPVLAYLGPLAASGGYYIACAADYLIANRNTLTGSIGVISGQSVDLSALMDKYGIK 213
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDI-VKIKRRLNEIYVKNCGKTYEEVEKTLDRD 187
+ Q I + + I ++ G E+V D
Sbjct: 214 MNTFTAGRNKDMLSINRPLTEEQRSIMQSIADECYDQFTGIVAESRGLDIEQVTALADGR 273
Query: 188 HIMSASEACDWGVVDKV 204
+A++A + G++D++
Sbjct: 274 VY-TAAQALEHGLIDEI 289
>gi|170080914|ref|YP_001730234.1| head protein [Escherichia coli str. K-12 substr. DH10B]
gi|169888749|gb|ACB02456.1| head protein [Escherichia coli str. K-12 substr. DH10B]
gi|312019774|emb|CBH95056.1| gpC [Enterobacteria phage phi80]
Length = 447
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 18/178 (10%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
V+G + I A++ K I N +A + + + T
Sbjct: 138 MVSGAFD---CADIIARM------RDIKPIWALANDMNCSAGQLIASSASRRLVTQTART 188
Query: 106 FCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRL 165
+G + + + G+ L + + I ++
Sbjct: 189 GSIGVMMAHSNYGAALKTNGVEVTLIYSGDRKVDGNPYEKLPKDVRADFQTRIDATRQMF 248
Query: 166 NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS-------RIDIEEKSK 216
E G + ++V + S E+ D G+ D+++ + R ++ + K
Sbjct: 249 AEKVSAYTGMSVQDVL-DTEAAVF-SGQESLDNGLADELVNNTDALGVMREALDRRKK 304
>gi|239626582|ref|ZP_04669613.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47_FAA]
gi|239516728|gb|EEQ56594.1| peptidase S14 ClpP [Clostridiales bacterium 1_7_47FAA]
Length = 252
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L +E ++ + + +N+ GG V AG+AI + + + P + +G S
Sbjct: 80 DHILPKLAEIEDDDSVDGLLVLLNTSGGDVDAGLAIAEMIASLSLPTVSLVLG--GSHSI 137
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+ +++H +G + + I+ R+ +
Sbjct: 138 GVPLAVSTNYSFIVPSGTMMIHPVR--MTGMVIGTAQTYEYFEMIQDRILTFVASHADIA 195
Query: 177 YEEVE------KTLDRD--HIMSASEACDWGVVDKV 204
Y+++ K L RD ++ +A + G++++V
Sbjct: 196 YDQLRDLMHNTKMLTRDLGTVLVGEQAVEAGLINQV 231
>gi|186972970|pdb|3BPP|A Chain A, 1510-N Membrane Protease K138a Mutant Specific For A
Stomatin Homolog From Pyrococcus Horikoshii
Length = 230
Score = 39.6 bits (91), Expect = 0.29, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 63/181 (34%), Gaps = 16/181 (8%)
Query: 44 IVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
IV+ + GQI + + E ++ + I + +++PGG A M I +Q K
Sbjct: 9 IVYVAQIKGQITSYTYDQFDRYITIAE-QDNAEAIIIELDTPGGRADAMMNIVQRIQQSK 67
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV- 159
P+ + +A + + S G ++ I
Sbjct: 68 IPVIIYV------YPPGASAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEA 121
Query: 160 -----KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ + G+ E+ + +D ++ EA +GV++ V ++ +K
Sbjct: 122 PPAITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELLKK 181
Query: 215 S 215
S
Sbjct: 182 S 182
>gi|329942445|ref|ZP_08291255.1| peptidase S49 family protein [Chlamydophila psittaci Cal10]
gi|325506439|gb|ADZ18077.1| putative exported protease [Chlamydophila psittaci 6BC]
gi|328815355|gb|EGF85343.1| peptidase S49 family protein [Chlamydophila psittaci Cal10]
gi|328914320|gb|AEB55153.1| peptidase, U7 family protein, putative [Chlamydophila psittaci 6BC]
Length = 333
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 54 HMATLICAQLLFLEA---ENPQKEISLYINSPGGVVTAGMAIYDTMQFIK----PPISTF 106
H A +I + L++ ++ K I + ++ PGG V +Y +QF K P+ F
Sbjct: 78 HTAKIIQDAITTLDSAPYKDRVKGIIIDMDCPGGEVFEISRVYSIIQFWKQRTQCPVYVF 137
Query: 107 CMGQAASMGSLLLSAGEKGMR--FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AS G + A +K +L + +L P S + ++ K +
Sbjct: 138 VNGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYFNVKEGLSRYGVQSDLLIAGKDK 197
Query: 165 L-NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG-VVDKVLMSRIDIEEKS 215
Y + K E ++ +D + +G VD V+ +R + +
Sbjct: 198 APMNPYTEWTAKDREIRQEIID---YL-------YGQFVDVVVTNRPRLTKDK 240
>gi|291545120|emb|CBL18229.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ruminococcus
sp. 18P13]
Length = 243
Score = 39.6 bits (91), Expect = 0.30, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 60/154 (38%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I L+ +E + + + + +N+ GG V AG+AI + + +K P + +G S+G
Sbjct: 66 EHIIPALVAIEQDRSIEGLLIILNTVGGDVEAGLAIAELLAGMKTPTVSLVVGGGHSIGV 125
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + ++ I +G + + K++ R+ N G +
Sbjct: 126 PLAVSAKRSFIVPSATMTI----HPVRMNGMIVGVPQTLSYFKKMQDRIVNFVTANSGIS 181
Query: 177 YEEVEKTL--DRDHIMS------ASEACDWGVVD 202
++ + + +M A + G++D
Sbjct: 182 EQQFRALMMETEELVMDVGTVVDGERAVELGLID 215
>gi|302348710|ref|YP_003816348.1| Nodulation protein NfeD related protein [Acidilobus saccharovorans
345-15]
gi|302329122|gb|ADL19317.1| Nodulation protein NfeD related protein [Acidilobus saccharovorans
345-15]
Length = 436
Score = 39.6 bits (91), Expect = 0.31, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 47/135 (34%), Gaps = 12/135 (8%)
Query: 75 ISLYINSPGGV---VTAGMAIYDTMQFIKPPISTFC--MGQAASMGSLLLSAGEKGMRFA 129
I + +N+PGG + ++ + Q P+ T+ G AAS GS + A
Sbjct: 71 IVIVMNTPGGYLSDMLKIVSYIEQAQAAGIPVYTYVPPDGMAASAGSYIAMAT---NSII 127
Query: 130 LPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
+ N + G + ++ E G+ + + D
Sbjct: 128 MDNGTFIGPSTPIVVGGTPLEQNHTEDAMIAFM----ESLASKWGRNATAAKIMVVDDRA 183
Query: 190 MSASEACDWGVVDKV 204
+A EA + +++ V
Sbjct: 184 FTAEEALRYHLINNV 198
>gi|9626248|ref|NP_040584.1| capsid component [Enterobacteria phage lambda]
gi|238903122|ref|YP_002928918.1| Minor capsid protein C (GPC) [Escherichia coli BW2952]
gi|253774242|ref|YP_003037073.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|137565|sp|P03711|VCAC_LAMBD RecName: Full=Minor capsid protein C; AltName: Full=Putative
peptidase GPC; Short=GPC; Contains: RecName: Full=Capsid
assembly protein NU3
gi|215109|gb|AAA96537.1| C (capsid component;439) [Enterobacteria phage lambda]
gi|194021578|gb|ACF32387.1| capsid component [Enterobacteria phage DE3]
gi|238861774|gb|ACR63772.1| Minor capsid protein C (GPC) [Escherichia coli BW2952]
gi|242376543|emb|CAQ31251.1| enterobacteria phage lambda, capsid component [Escherichia coli
BL21(DE3)]
gi|253325286|gb|ACT29888.1| peptidase S49 [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253976951|gb|ACT42621.1| capsid component [Escherichia coli BL21(DE3)]
Length = 439
Score = 39.6 bits (91), Expect = 0.33, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQVVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|324014985|gb|EGB84204.1| putative signal peptide peptidase SppA [Escherichia coli MS 60-1]
Length = 426
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 95 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 154
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 155 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 214
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + I+ + G + + V + S EA D G+ D+++
Sbjct: 215 PDDVRETLQSRMDATRRIFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 272
Query: 207 SRIDI 211
S I
Sbjct: 273 STDAI 277
>gi|110641352|ref|YP_669082.1| minor capsid protein C [Escherichia coli 536]
gi|191173120|ref|ZP_03034653.1| minor capsid protein C [Escherichia coli F11]
gi|110342944|gb|ABG69181.1| minor capsid protein C [Escherichia coli 536]
gi|190906665|gb|EDV66271.1| minor capsid protein C [Escherichia coli F11]
Length = 439
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 59/185 (31%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + I+ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRRIFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|313847682|emb|CBY16670.1| putative exported protease [Chlamydophila psittaci RD1]
Length = 335
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 21/173 (12%)
Query: 54 HMATLICAQLLFLEA---ENPQKEISLYINSPGGVVTAGMAIYDTMQFIK----PPISTF 106
H A +I + L++ ++ K I + ++ PGG V +Y +QF K P+ F
Sbjct: 80 HTAKIIQDAITTLDSAPYKDRVKGIIIDMDCPGGEVFEISRVYSIIQFWKQRTQCPVYVF 139
Query: 107 CMGQAASMGSLLLSAGEKGMR--FALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AS G + A +K +L + +L P S + ++ K +
Sbjct: 140 VNGLCASGGYYVACAADKIYSTSSSLIGSVGVLSGPYFNVKEGLSRYGVQSDLLIAGKDK 199
Query: 165 L-NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWG-VVDKVLMSRIDIEEKS 215
Y + K E ++ +D + +G VD V+ +R + +
Sbjct: 200 APMNPYTEWTAKDREIRQEIID---YL-------YGQFVDVVVTNRPRLTKDK 242
>gi|309701424|emb|CBJ00728.1| Minor capsid protein [Escherichia coli ETEC H10407]
Length = 439
Score = 39.2 bits (90), Expect = 0.35, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARMRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|145591098|ref|YP_001153100.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514]
gi|145282866|gb|ABP50448.1| peptidase S49 [Pyrobaculum arsenaticum DSM 13514]
Length = 552
Score = 39.2 bits (90), Expect = 0.38, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 41/175 (23%)
Query: 59 ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLL 118
+ L+ L + L INSPGG V+A A+Y + + G AAS +
Sbjct: 62 VIRDLVSLAQRKDVAGVVLVINSPGGTVSATEALYSALAGLNKTKYAVVNGLAASGAYYV 121
Query: 119 LSAGEKGMRFALPNARI-----LLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
A EK +A P++ + + + D + + L + Y
Sbjct: 122 AMAAEK--IYATPSSWVGSIGVVAVMWPDEYFYDIPDYVYTTGPLKYYGKELTDYY---- 175
Query: 174 GKTYEEVEKTLDRDHI------------------------MSASEACDWGVVDKV 204
E V R + +A +A G+VD V
Sbjct: 176 -NDIERV-----RMNFVQAVLRGRAGRIKADPQVFETAAIFTAEDALRLGLVDAV 224
>gi|18977905|ref|NP_579262.1| nodulation protein nfeD [Pyrococcus furiosus DSM 3638]
gi|18893669|gb|AAL81657.1| nodulation protein nfeD [Pyrococcus furiosus DSM 3638]
Length = 447
Score = 39.2 bits (90), Expect = 0.39, Method: Composition-based stats.
Identities = 35/193 (18%), Positives = 67/193 (34%), Gaps = 25/193 (12%)
Query: 35 IYSRLL-----KER---IVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPG 83
I++ LL K R +V+ +TGQI + + E N + I + +++PG
Sbjct: 12 IFTLLLFAQGVKGRDSNVVYVAQITGQITSYTFDQFDRYISIAERNNARA-IIIELDTPG 70
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
G A M I +Q K P+ + +A + + S G
Sbjct: 71 GRGDAMMEIIQRIQQAKVPVIIYV------YPPGASAASAGTYIALGAHLIAMAPGTSIG 124
Query: 144 FSGQASDIERHAQDIV------KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACD 197
++ + + + G+ EK + D ++ EA
Sbjct: 125 ACRPILGYSQNGSIVEAPPKIVNHYIAYIKSLAEESGRNATIAEKFITEDLSLTPEEALK 184
Query: 198 WGVVDKVLMSRID 210
+GV+ +V+ +D
Sbjct: 185 YGVI-EVIARDVD 196
>gi|320660180|gb|EFX27694.1| putative phage minor capsid protein [Escherichia coli O55:H7 str.
USDA 5905]
Length = 439
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 33/185 (17%), Positives = 58/185 (31%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + I+ + G + + V + S EA D G+ D+++
Sbjct: 228 PGDVRETLQSRMDATRRIFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|331682243|ref|ZP_08382862.1| minor capsid protein C (GPC) [Escherichia coli H299]
gi|331079874|gb|EGI51053.1| minor capsid protein C (GPC) [Escherichia coli H299]
Length = 439
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 59/185 (31%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + ++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQYRMDATRRMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|153853239|ref|ZP_01994648.1| hypothetical protein DORLON_00633 [Dorea longicatena DSM 13814]
gi|149754025|gb|EDM63956.1| hypothetical protein DORLON_00633 [Dorea longicatena DSM 13814]
Length = 250
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+ +N+ GG V AG++I + + + P + +G + S+G L + + F +P+ ++
Sbjct: 94 ILLNTLGGDVEAGLSIAEMIASLSKPTVSLVLGGSHSIGGPLAVSAD--YSFIVPSGTMV 151
Query: 137 LHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL--------DRDH 188
+H G +++ ++++ + R+ ++ E +E+ + D
Sbjct: 152 IHPVRSN--GMFIGVQQSLDNMIRTQDRITRFLSEHSSMKQERIEELMLNPTELVKDVGT 209
Query: 189 IMSASEACDWGVVDKV 204
++ +A G++D V
Sbjct: 210 LLEGKDAVREGLIDAV 225
>gi|170751871|ref|YP_001758131.1| hypothetical protein Mrad2831_5503 [Methylobacterium radiotolerans
JCM 2831]
gi|170658393|gb|ACB27448.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 189
Score = 39.2 bits (90), Expect = 0.41, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 61/179 (34%), Gaps = 23/179 (12%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI----- 99
V ++G ++ M Q L A ++ + + + + GG + + ++F
Sbjct: 16 VLLSGPVDYDMYKDFRRQ---LGAAGDREIVVVELTTLGGDPEVARMMGEDIRFNTAMDP 72
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
S G+ +S + R+ R+++H+ I
Sbjct: 73 NRRFVFLGKAAIYSAGTTFMSFFARPNRYLTCGTRLMIHERKMNKQLHVQGPLTT--CIA 130
Query: 160 KIKRRLNEIY-------------VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+K LNEI V T +EV + + + A EA G+++ V+
Sbjct: 131 SVKATLNEILCSIEIQNEGFANLVAGSDVTLDEVLEKAPANWYLEAEEAKRRGLIEAVI 189
>gi|324009542|gb|EGB78761.1| putative signal peptide peptidase SppA [Escherichia coli MS 57-2]
Length = 430
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 95 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 154
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 155 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAVLEKQGVEITLIYSGSHKVDGNPYSHL 214
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 215 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 272
Query: 207 SRIDI 211
S I
Sbjct: 273 SSDAI 277
>gi|306813973|ref|ZP_07448146.1| Minor capsid protein C from bacteriophage origin [Escherichia coli
NC101]
gi|222032926|emb|CAP75666.1| capsid protein of prophage [Escherichia coli LF82]
gi|305852610|gb|EFM53058.1| Minor capsid protein C from bacteriophage origin [Escherichia coli
NC101]
gi|312945741|gb|ADR26568.1| Minor capsid protein C from bacteriophage origin [Escherichia coli
O83:H1 str. NRG 857C]
Length = 443
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAVLEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 SSDAI 290
>gi|294338322|emb|CBJ94361.1| Probable phage ClpP protease [Campylobacter phage CPt10]
Length = 290
Score = 38.8 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 5/141 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG-QAASMGSLLLSAGEK 124
L N I ++I S GG + ++ T + S G+++ G
Sbjct: 60 LNGANEGDSIQIFIASVGGFADELNRFTNIIRTKFYGNVTTVLNPFGYSCGAMMFLIG-- 117
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R N+ I+ H S G SG+ SD++ K + N T +E+E +
Sbjct: 118 NSRVIYENSSIMFHSVSFGVSGKHSDVKTQFDFSNKYWNEYMKSL-LNPYLTKKEIELLI 176
Query: 185 DR-DHIMSASEACDWGVVDKV 204
D + A E C G+ +
Sbjct: 177 DGVEFWFDAYEMCKRGIATHI 197
>gi|221504959|gb|EEE30624.1| conserved hypothetical protein [Toxoplasma gondii VEG]
Length = 144
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
T E+ + + + ++ EA G++D +L
Sbjct: 112 TTTTAAELLRLMQKGVFLTPEEAKALGIIDYIL 144
>gi|237843529|ref|XP_002371062.1| hypothetical protein TGME49_013130 [Toxoplasma gondii ME49]
gi|211968726|gb|EEB03922.1| hypothetical protein TGME49_013130 [Toxoplasma gondii ME49]
Length = 144
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 7/33 (21%), Positives = 16/33 (48%)
Query: 173 CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
T E+ + + + ++ EA G++D +L
Sbjct: 112 TTTTAAELLRLMQKGVFLTPEEAKALGIIDYIL 144
>gi|115379446|ref|ZP_01466546.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca
DW4/3-1]
gi|310821059|ref|YP_003953417.1| peptidase s49, protease iv [Stigmatella aurantiaca DW4/3-1]
gi|115363555|gb|EAU62690.1| signal peptide peptidase SppA, 67K type [Stigmatella aurantiaca
DW4/3-1]
gi|309394131|gb|ADO71590.1| Peptidase S49, protease IV [Stigmatella aurantiaca DW4/3-1]
Length = 592
Score = 38.8 bits (89), Expect = 0.47, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 44/131 (33%), Gaps = 1/131 (0%)
Query: 74 EISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNA 133
+ + + S ++ Y F +P T +G + ++ A G+ F
Sbjct: 378 PVVISMGSYAASGGYWISTYGDRIFAQPTTITGSIGVFGMLPNVQKLANTHGITFDSVQT 437
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS 193
+ + + +++ R + +I + + E V + S
Sbjct: 438 AKMANPATLARPKTEAELARIQHMVDRIYEQFLSKVAEGRKLPRERVHEIAQGRVW-SGE 496
Query: 194 EACDWGVVDKV 204
EA G+VD+V
Sbjct: 497 EARKLGLVDEV 507
>gi|302382322|ref|YP_003818145.1| peptidase S14 ClpP [Brevundimonas subvibrioides ATCC 15264]
gi|302192950|gb|ADL00522.1| peptidase S14 ClpP [Brevundimonas subvibrioides ATCC 15264]
Length = 190
Score = 38.8 bits (89), Expect = 0.49, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 64/177 (36%), Gaps = 19/177 (10%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK---- 100
+ + G ++ M AQ L+ I + +++ GG + + ++F
Sbjct: 17 ILLGGDVDYAMYWNFRAQ---LDQAPATGLIVVELSTLGGDPEVARMMGEDIRFQSDMNQ 73
Query: 101 -PPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-----------FSGQA 148
S G+ L+S R+ R+++H+
Sbjct: 74 ERRFVFLGKAIVYSAGATLMSFFAPENRYLTRGTRLMIHERKMDKILDIKGPLTSCVATV 133
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ + + ++I+R + + + EE+E+ + + A+EA + G+V V+
Sbjct: 134 TAMLHELEHSIQIQREGFQNLIVGSSVSLEELERRAPANWYIEAAEAVELGLVTAVI 190
>gi|324114286|gb|EGC08257.1| peptidase S49 [Escherichia fergusonii B253]
Length = 439
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGVFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|226311643|ref|YP_002771537.1| hypothetical protein BBR47_20560 [Brevibacillus brevis NBRC 100599]
gi|226094591|dbj|BAH43033.1| conserved hypothetical membrane protein [Brevibacillus brevis NBRC
100599]
Length = 447
Score = 38.8 bits (89), Expect = 0.50, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 55/152 (36%), Gaps = 20/152 (13%)
Query: 75 ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNAR 134
+ L+IN+PGG V A I ++ + + QA S G+ + + P +
Sbjct: 73 VILHINTPGGEVNAADQIGQLIRQAPMHVIAYIDNQAFSAGTYIALNANE--IIMTPGSS 130
Query: 135 ILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH-I---- 189
+ P A DI+ + K+K + + + ++ D
Sbjct: 131 MGAATPIDLAGNAA-DIKFISGWSNKMKAA-----AELNNRNPDVARAMVEIDTEFPGLK 184
Query: 190 -------MSASEACDWGVVDKVLMSRIDIEEK 214
+ A +A G D V+ ++ ++ +K
Sbjct: 185 PKGTVLSLDAQQAKRLGYADDVVSNKEELLKK 216
>gi|218132895|ref|ZP_03461699.1| hypothetical protein BACPEC_00756 [Bacteroides pectinophilus ATCC
43243]
gi|217991768|gb|EEC57772.1| hypothetical protein BACPEC_00756 [Bacteroides pectinophilus ATCC
43243]
Length = 212
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 31/149 (20%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL +E + + +N+ GG V+AG+A+ + + + P + +G + S+G
Sbjct: 59 EHILPQLAAVEDNSDIDGVLFLLNTVGGDVSAGLALAEMISSLSKPTVSLVLGDSHSIGV 118
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L A + F P +++H SG + I+ R+ ++ +
Sbjct: 119 PLAVACD--YSFITPTGTMIIHPVR--MSGTVIGAPQTYDYFKLIQDRIAGFIERHTECS 174
Query: 177 YEEVEKTL------DRD--HIMSASEACD 197
E++E+ + +D I+ EA D
Sbjct: 175 REQIEQMMMNTGILTKDLGTILVGEEAVD 203
>gi|160939827|ref|ZP_02087174.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC
BAA-613]
gi|158437261|gb|EDP15026.1| hypothetical protein CLOBOL_04718 [Clostridium bolteae ATCC
BAA-613]
Length = 315
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I +L +E ++ + + +N+ GG V AG+AI + + + P + +G S
Sbjct: 143 DHILPKLAEIEDDDSVDGLLVLLNTSGGDVDAGLAIAEMIASLSLPTVSLVLG--GSHSI 200
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ A F +P+ +++H +G + + I+ R+ +
Sbjct: 201 GVPLAVSTNYSFIVPSGTMMIHPVR--MTGMVIGTSQTYEYFEMIQDRILTFVSNHADIA 258
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV 204
Y+++ + + +++ ++A + G++++V
Sbjct: 259 YDQLRELMHNTKMLTRDLGTVLVGTQAVEAGLINQV 294
>gi|297583628|ref|YP_003699408.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens
MLS10]
gi|297142085|gb|ADH98842.1| signal peptide peptidase SppA, 36K type [Bacillus selenitireducens
MLS10]
Length = 328
Score = 38.8 bits (89), Expect = 0.53, Method: Composition-based stats.
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 35/186 (18%)
Query: 63 LLFLEAENPQKEIS---LYINSPGGVVTAGMAIYDTM----QFIKPPISTFCMGQAASMG 115
L LE +I L +N+PGG V +++ + + P+ GQAAS G
Sbjct: 85 LRQLEYAAESTDIYGVILQVNTPGGGVVESDELHNRIVAIQEEFDKPVYAVMGGQAASGG 144
Query: 116 SLLLSAGEK------------GMRFALPNARILLHQP----SGGFSGQASDIER-HAQDI 158
+ + +K G+ N L + SG+ DI +
Sbjct: 145 YYISAPADKIYANAQTFTGSIGVIIQSLNVAGLAEEWGVSLETFTSGEFKDILSPTKEVT 204
Query: 159 VKIKRRLNEIYVKNCGKTYEEV---EKTLDRD--------HIMSASEACDWGVVDKVLMS 207
+ LNEI + + + + V + L RD I + ++A + G+VD++
Sbjct: 205 DDERELLNEIVMDSYEQFVDVVDNGRENLSRDEVYELADGRIFTGNQAVENGLVDEIGNR 264
Query: 208 RIDIEE 213
IE+
Sbjct: 265 DAAIED 270
>gi|331651533|ref|ZP_08352553.1| minor capsid protein C (GPC) [Escherichia coli M718]
gi|331050806|gb|EGI22863.1| minor capsid protein C (GPC) [Escherichia coli M718]
Length = 484
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 153 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 212
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 213 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 272
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 273 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 330
Query: 207 SRIDI 211
S I
Sbjct: 331 STDAI 335
>gi|327253537|gb|EGE65170.1| minor capsid protein C domain protein [Escherichia coli STEC_7v]
Length = 315
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|325497825|gb|EGC95684.1| capsid protein [Escherichia fergusonii ECD227]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|323963682|gb|EGB59198.1| peptidase S49 [Escherichia coli M863]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|323942023|gb|EGB38201.1| peptidase S49 [Escherichia coli E482]
Length = 362
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 95 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 154
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 155 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 214
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 215 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 272
Query: 207 SRIDI 211
S I
Sbjct: 273 STDAI 277
>gi|323185917|gb|EFZ71274.1| minor capsid protein C [Escherichia coli 1357]
Length = 419
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 88 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 147
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 148 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 207
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 208 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 265
Query: 207 SRIDI 211
S I
Sbjct: 266 STDAI 270
>gi|315252463|gb|EFU32431.1| putative signal peptide peptidase SppA [Escherichia coli MS 85-1]
Length = 426
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 95 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 154
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 155 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 214
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 215 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 272
Query: 207 SRIDI 211
S I
Sbjct: 273 STDAI 277
>gi|312969556|ref|ZP_07783739.1| minor capsid C [Escherichia coli 1827-70]
gi|310337841|gb|EFQ02930.1| minor capsid C [Escherichia coli 1827-70]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|307310890|ref|ZP_07590536.1| peptidase S49 [Escherichia coli W]
gi|306909068|gb|EFN39564.1| peptidase S49 [Escherichia coli W]
gi|315060844|gb|ADT75171.1| peptidase S49 [Escherichia coli W]
gi|323378587|gb|ADX50855.1| peptidase S49 [Escherichia coli KO11]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|293413827|ref|ZP_06656476.1| capsid protein [Escherichia coli B185]
gi|291433885|gb|EFF06858.1| capsid protein [Escherichia coli B185]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|218699885|ref|YP_002407514.1| minor capsid protein C from bacteriophage origin [Escherichia coli
IAI39]
gi|218369871|emb|CAR17645.1| Minor capsid protein C from bacteriophage origin [Escherichia coli
IAI39]
Length = 488
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 153 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 212
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 213 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 272
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 273 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 330
Query: 207 SRIDI 211
S I
Sbjct: 331 STDAI 335
>gi|26249012|ref|NP_755052.1| putative capsid protein of prophage [Escherichia coli CFT073]
gi|26109419|gb|AAN81622.1|AE016765_24 Putative capsid protein of prophage [Escherichia coli CFT073]
Length = 477
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 146 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 205
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 206 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 265
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 266 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 323
Query: 207 SRIDI 211
S I
Sbjct: 324 STDAI 328
>gi|193067665|ref|ZP_03048632.1| minor capsid protein C [Escherichia coli E110019]
gi|192959077|gb|EDV89513.1| minor capsid protein C [Escherichia coli E110019]
Length = 439
Score = 38.8 bits (89), Expect = 0.54, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 60/185 (32%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAASM 114
I A+L ++ I L +++PGG+V D + ++ P+ S
Sbjct: 108 NGIIARLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 115 GSLLLSA------------GEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
G LL SA G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQTARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + +++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRQMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|295398025|ref|ZP_06808081.1| U7 family peptidase [Aerococcus viridans ATCC 11563]
gi|294973783|gb|EFG49554.1| U7 family peptidase [Aerococcus viridans ATCC 11563]
Length = 362
Score = 38.5 bits (88), Expect = 0.58, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 47/136 (34%), Gaps = 1/136 (0%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E+ + I + + +++ + +T +G + + E G+
Sbjct: 148 ESREIPIYVSMGQMAASGGYMISMVGDQIYTDSETTTGSIGVIMQVPNFSGFMEEHGLAM 207
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+ L S + I + R EI G + ++V+K D
Sbjct: 208 DTYKSGALKDMGSSFRGASDEEKNVLNSFIQEKYNRFVEIVANGRGMSTDDVKKLADG-R 266
Query: 189 IMSASEACDWGVVDKV 204
I S S+A + G+ D++
Sbjct: 267 IYSGSQAVENGLADQI 282
>gi|310815708|ref|YP_003963672.1| phage terminase GpA [Ketogulonicigenium vulgare Y25]
gi|308754443|gb|ADO42372.1| phage terminase GpA [Ketogulonicigenium vulgare Y25]
Length = 709
Score = 38.5 bits (88), Expect = 0.60, Method: Composition-based stats.
Identities = 34/169 (20%), Positives = 62/169 (36%), Gaps = 23/169 (13%)
Query: 45 VFVTGQI----------EDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYD 94
++++G I + + A L +++ +NS GG+ T G AIY
Sbjct: 4 IYLSGTIGQSFWDEEFFTESSVRDVLAGL--------SGPLTVNLNSGGGIATEGQAIYT 55
Query: 95 TMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQAS---DI 151
++ ++ G AAS SL+ AG+ A +++H P+ D
Sbjct: 56 LLKEYPGEVTIVVNGIAASAASLIAMAGD--HIIMPEGAIMMIHDPASWAVEGRGTEADH 113
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
+ A+ + I IY G + E K + + +A G
Sbjct: 114 LKAAKHLGVIANAYAAIYAARAGISPEAARKIMQVETYYDGPQAVRAGF 162
>gi|167761166|ref|ZP_02433293.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704]
gi|167660832|gb|EDS04962.1| hypothetical protein CLOSCI_03571 [Clostridium scindens ATCC 35704]
Length = 325
Score = 38.5 bits (88), Expect = 0.61, Method: Composition-based stats.
Identities = 18/136 (13%), Positives = 44/136 (32%), Gaps = 5/136 (3%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + + Y+ +++ + T +G S + + G+R+
Sbjct: 127 EATGRPVWDYMAHYAASGGYMVSMASDKIYANSNTVTGSIGVIMSGFDMTGLYEKLGIRY 186
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
I + + + + + + + I + G + E V D
Sbjct: 187 FS----ITSGEYKDSSQMTDEQMAIYQEQVDEYYNKFVSIVAEGRGMSEEAVRGLADGRT 242
Query: 189 IMSASEACDWGVVDKV 204
+A +A D G++D +
Sbjct: 243 Y-TAEQAIDNGLIDSI 257
>gi|291457864|ref|ZP_06597254.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213]
gi|291380519|gb|EFE88037.1| conserved hypothetical protein [Bifidobacterium breve DSM 20213]
Length = 50
Score = 38.5 bits (88), Expect = 0.63, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 21/34 (61%)
Query: 161 IKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
+++++++ G+ + V++ +RD MS+SE
Sbjct: 3 CMQKVDKMFASFTGQPLDMVQQWTERDRFMSSSE 36
>gi|255280960|ref|ZP_05345515.1| Clp protease [Bryantella formatexigens DSM 14469]
gi|255268408|gb|EET61613.1| Clp protease [Bryantella formatexigens DSM 14469]
Length = 221
Score = 38.5 bits (88), Expect = 0.66, Method: Composition-based stats.
Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL +E + + + +N+ GG V AG+AI + + + P + +G + S+G
Sbjct: 56 EHILPQLAAIEDSREIEGVLILLNTVGGDVEAGLAIAEMIASLSKPTVSLVLGGSHSIGV 115
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + + I SG + +++ R+ +C T
Sbjct: 116 PIAVSADYSFIVETGTMVI----HPVRMSGTVIGAPQTYDYFRQMQDRILGFISGHCSAT 171
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ +E+ + +D I+ S+A + G++++V
Sbjct: 172 RDRLEELMLDTGMLTKDLGTILVGSQAVEEGIINQV 207
>gi|149184711|ref|ZP_01863029.1| hypothetical protein ED21_28373 [Erythrobacter sp. SD-21]
gi|148832031|gb|EDL50464.1| hypothetical protein ED21_28373 [Erythrobacter sp. SD-21]
Length = 186
Score = 38.5 bits (88), Expect = 0.68, Method: Composition-based stats.
Identities = 22/173 (12%), Positives = 59/173 (34%), Gaps = 17/173 (9%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK---PPI 103
+ G +++ M Q L A + + + + GG A+ D ++ ++ I
Sbjct: 17 LVGSVDEAMYAEFRNQ---LSAGPTDGPLVIALTTLGGNPEIARAMADDVRLLREAGRTI 73
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG-----------FSGQASDIE 152
S G+ ++ RF ++ +L+H+ + Q
Sbjct: 74 YFLGKAAVYSAGATFMAGFPIACRFLTRDSTLLIHERQINKTISLSGPLRSCTNQLKAAL 133
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ + I+ + +E++ + + + +A + G++ V+
Sbjct: 134 NEIEQSIAIEEAGFRALAEGSKVDFEKIREKAPDNWYLGCEKAKELGLIADVI 186
>gi|51892696|ref|YP_075387.1| ATP-dependent Clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
gi|51856385|dbj|BAD40543.1| ATP-dependent clp protease proteolytic subunit [Symbiobacterium
thermophilum IAM 14863]
Length = 260
Score = 38.1 bits (87), Expect = 0.74, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 20/160 (12%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I QL+ +E + + L +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 83 EHIIPQLVAVEQSPEIEGLLLVLNTVGGDVEAGLAIAEMVASLSKPSVSLVLGGGHSIGV 142
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
+ + A I +G + + + + K++ R+ V N +
Sbjct: 143 PIAVSTTYSFIAATATMTI----HPIRLTGLVIGVPQTYEYLDKMQDRVVRFVVSNSRIS 198
Query: 177 YEEVEKTLDRDHIMSAS------------EACDWGVVDKV 204
E + + R + +A G++D+V
Sbjct: 199 EERFRELMFR----TGELARDVGTVVVGPDAVREGLIDEV 234
>gi|291522433|emb|CBK80726.1| Protease subunit of ATP-dependent Clp proteases [Coprococcus catus
GD/7]
Length = 233
Score = 38.1 bits (87), Expect = 0.77, Method: Composition-based stats.
Identities = 32/156 (20%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+ QL E I + +N+ GG V AG+AI + + I P + +G + S+G
Sbjct: 60 EHVLPQLAMAEDSCDIDGILVLLNTMGGDVEAGLAIAEMIASISKPTVSLVLGGSHSIGV 119
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P+ +++H +G + + + +I+ R+ V N
Sbjct: 120 PLAVSAD--YSFIVPSGTMIIHPVR--MNGMVIGVIQTYEYFERIQERILNFIVTNSRIA 175
Query: 177 YEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
++K + +D ++ E D G++D +
Sbjct: 176 KSHLKKLMLDTSKLAKDVGTVLDGQETVDCGLIDAI 211
>gi|83593953|ref|YP_427705.1| peptidase S49 [Rhodospirillum rubrum ATCC 11170]
gi|83576867|gb|ABC23418.1| Peptidase S49 [Rhodospirillum rubrum ATCC 11170]
Length = 593
Score = 38.1 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 9/60 (15%)
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGK-------TYEEVEKTLDRDHIMSASEACDWGVVD 202
D A ++ + L+ IY GK + E +E+ R + + +A G+VD
Sbjct: 446 DPFDEAGQ-RRMDQILDAIYADFTGKAAAGRGLSPEAIEEA-ARGRVWTGEDALAHGLVD 503
>gi|126465069|ref|YP_001040178.1| nodulation efficiency protein NfeD [Staphylothermus marinus F1]
gi|126013892|gb|ABN69270.1| Nodulation efficiency protein NfeD [Staphylothermus marinus F1]
Length = 443
Score = 38.1 bits (87), Expect = 0.79, Method: Composition-based stats.
Identities = 29/175 (16%), Positives = 67/175 (38%), Gaps = 11/175 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
V + G+I L+ L EAE + + +++PGG++ + + ++ P+
Sbjct: 32 VNINGEINYGTQYLLEEALS--EAEKLDAPLIMILDTPGGLLDSANNMIKLIRNSNVPV- 88
Query: 105 TFCMGQAASMGSLLLSAGEKG-----MRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+G G+ SAG + P I QP + + I+
Sbjct: 89 ---IGYVYPAGAQAWSAGTLILLATHIAAMAPGTLIGAAQPVLYDPTTGTFKPINESKII 145
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ ++ G+ E + ++ ++A +A + V++ + ++ D+ K
Sbjct: 146 NPIVGIITTLAEDRGRNKTAAELFVRKNLYLTAEKALKYHVIEVIALNMDDLINK 200
>gi|296285017|ref|ZP_06863015.1| hypothetical protein CbatJ_15425 [Citromicrobium bathyomarinum
JL354]
Length = 574
Score = 38.1 bits (87), Expect = 0.81, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 63/177 (35%), Gaps = 19/177 (10%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP-- 102
+ + G ++ M L + P I + + + G ++ + ++ ++
Sbjct: 401 IRLYGTMDAAMYAEFSE---MLSEQEPGGPIVIALTTMDGDPEIARSMAEDIRLLRDRGR 457
Query: 103 --ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILL--HQPSGGFSGQASDIERHAQDI 158
I S G L ++A G R+ ++L+ ++ + + A +
Sbjct: 458 REIIFLGKTAVYSAGVLFMAAFPVGQRYLTRATKLLITENKRAQPIQLPGGSLRSVASQL 517
Query: 159 VKIKRRL----------NEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+R + + + +E+ + D ++ASEA G++ +V+
Sbjct: 518 EHARREIQREIDQEDDDFRAISEGSNVSVQELREKAPGDWHITASEAKAMGLIAEVV 574
>gi|311694855|gb|ADP97728.1| capsid protein of prophage [marine bacterium HP15]
Length = 441
Score = 38.1 bits (87), Expect = 0.86, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 49/160 (30%), Gaps = 9/160 (5%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
G++ +L L + P IS + G+ Y ++ T
Sbjct: 126 GGEV--AGCFDTARRLNELRGQKPIASISYDMACSAGMALHSATDY---RYTTTSARTGS 180
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNA-RILLHQPSGGFSGQASDIERHAQDIVKIKRRLN 166
+G S G+ L ++ + + A+ +++
Sbjct: 181 VGVVMMHASFEEQLKANGIDVTLIHSGAFKVDGNPYENLPEQVLARFQAES-DRLRNEFA 239
Query: 167 EIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++ + G + +V + + +A + G D+++
Sbjct: 240 DMVATHIGLSASDVLA-TEAAIY-TGQDAIEAGFADELIN 277
>gi|242398666|ref|YP_002994090.1| NfeD nodulation like protein, probable membrane protein
[Thermococcus sibiricus MM 739]
gi|242265059|gb|ACS89741.1| NfeD nodulation like protein, probable membrane protein
[Thermococcus sibiricus MM 739]
Length = 451
Score = 38.1 bits (87), Expect = 0.94, Method: Composition-based stats.
Identities = 34/177 (19%), Positives = 62/177 (35%), Gaps = 17/177 (9%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G+I + + E N I + +++PGG A I + ++ + P+ T+
Sbjct: 32 IKGEITPYTYDQFDRYISEAERANANA-IIILLDTPGGRADAMQNIIERIKSAEVPVITY 90
Query: 107 CM---GQAASMGSLLLSAGE-----KGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
G AAS G+ + G + Q + +A I
Sbjct: 91 VYPPGGMAASAGTYIALGSHLIAMAPGTSIGACRPILGYSQNGSIIEAPPKVVNFYASYI 150
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
K G+ VEK + D + EA + GV++ + D+ EK+
Sbjct: 151 KS--------LAKASGRNETMVEKFITEDLAIDPEEALNSGVIEVIANDVNDLLEKA 199
>gi|325108414|ref|YP_004269482.1| hypothetical protein Plabr_1850 [Planctomyces brasiliensis DSM
5305]
gi|324968682|gb|ADY59460.1| hypothetical protein Plabr_1850 [Planctomyces brasiliensis DSM
5305]
Length = 208
Score = 38.1 bits (87), Expect = 0.95, Method: Composition-based stats.
Identities = 17/157 (10%), Positives = 52/157 (33%), Gaps = 4/157 (2%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+ + G + D L+ + + +Y +S GG V +++ ++ +
Sbjct: 32 IMLAGDLNDKHTDLLQSVIDV----PRGSRGVIYFDSNGGSVYTSLSLMSLIRLRNLDAT 87
Query: 105 TFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+G+ +S L +A + + + + + A+ I++
Sbjct: 88 GVVLGECSSAALLPFAACRRRYVTPFSTLLFHAMKWESEENVRLHEAAEWARHFQAIEKH 147
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
+ + + + ++ + +S E G+
Sbjct: 148 FDGLLAQLFDADPQLLQSWTEPGRFISGEELAKAGLA 184
>gi|320197690|gb|EFW72301.1| Head-tail preconnector protein GP5 [Escherichia coli WV_060327]
Length = 439
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 24/185 (12%), Positives = 56/185 (30%), Gaps = 32/185 (17%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I ++L ++ I L +++PGG+V D + ++ + + + +
Sbjct: 108 NGIISRLQQAASDPMVDGILLDMDTPGGMVAGAFDCADIIARVRDIKPVWALANDMNCSA 167
Query: 117 L--------------LLSAGEKGMRFALPN------------ARILLHQPSGGFSGQASD 150
+ G G+ A N I + +
Sbjct: 168 GQLLASAASRRLVTQIARTGSIGVMMAHSNYGAALEKQGVEITLIYSGSHKVDGNPYSHL 227
Query: 151 IERHAQDIVKIKRRLNEIYVKN----CGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
+ + + ++ + G + + V + S EA D G+ D+++
Sbjct: 228 PDDVRETLQSRMDATRRMFAQKVSAYTGLSVQAVL-DTEAAVY-SGQEAIDAGLADELVN 285
Query: 207 SRIDI 211
S I
Sbjct: 286 STDAI 290
>gi|91203949|emb|CAJ71602.1| similar to signal peptide peptidase [Candidatus Kuenenia
stuttgartiensis]
Length = 328
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 37/184 (20%), Positives = 68/184 (36%), Gaps = 34/184 (18%)
Query: 54 HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP----ISTFCMG 109
M + + +L + + K I L INSPGG VTA +Y + K + M
Sbjct: 76 DMVSRVKEELTLAKMDKQVKAILLRINSPGGKVTASDMMYYEIMRFKEETKKKVIACIMD 135
Query: 110 QAASMGSLLLSAGEKGM-------------RFALPNARILLHQPSGGFSGQASDIERHAQ 156
AS G + ++ +K + L +L S + + +
Sbjct: 136 IGASGGYYVAASADKIIAHPTTVTGSIGVIMINLSIEGLLQKVGIADASVKTGEHKDMGS 195
Query: 157 DIVKIKR--------RLNEIYVKNC--------GKTYEEVEKTLDRDHIMSASEACDWGV 200
+ K+ LN +Y + G + E++ + D I SA +A + G+
Sbjct: 196 PLKKMTEEDRRIFSEILNAMYERFLCVIEENREGISMEKIRELADG-RIYSAQQALENGL 254
Query: 201 VDKV 204
+D++
Sbjct: 255 IDQI 258
>gi|212224206|ref|YP_002307442.1| nodulation protein nfeD [Thermococcus onnurineus NA1]
gi|212009163|gb|ACJ16545.1| nodulation protein nfeD [Thermococcus onnurineus NA1]
Length = 441
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 37/170 (21%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Query: 51 IEDHMATLICAQLLFLEAENPQKE---ISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
I+ + Q +E + I + +N+PGG A I +Q K P+ +
Sbjct: 32 IDGMITGYTVDQFDRYISEAEKANASAIIIELNTPGGRADAMQEIVMRIQNAKVPVIIYV 91
Query: 108 M---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
G AAS G+ + + P I +P G+ S +E A+ +
Sbjct: 92 YPSGGMAASAGTYIALGSH--LIAMAPGTVIGACRPILGYGANGSIVEAPAKIVNFYITY 149
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
L E + G+ E+ + D +++ EA ++GV++ V D+ +K
Sbjct: 150 LRE-LAEMSGRNATLAEQFITEDRSVTSQEALEYGVIEVVATDVNDLLQK 198
>gi|194761580|ref|XP_001963007.1| GF15726 [Drosophila ananassae]
gi|190616704|gb|EDV32228.1| GF15726 [Drosophila ananassae]
Length = 260
Score = 37.7 bits (86), Expect = 1.0, Method: Composition-based stats.
Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 25/164 (15%)
Query: 51 IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
+ + + A L LE N KE G + T ++ + P + G
Sbjct: 54 LTSANSNVFSAGLDILEMYNADKEQL------GTLWTELQNVWIALYGSGLPTAAAINGH 107
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYV 170
A + G LL +A E R LPN I L++ G + + L +
Sbjct: 108 APAGGCLLATACE--YRAMLPNCVIGLNETQLGIIAPKW-------LMSGYQNILPQRLA 158
Query: 171 KNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
+ L + + + EA G++D+++ S+ + EK
Sbjct: 159 ER----------ALTQGRLFTTEEALKAGLIDEIVNSKEEALEK 192
>gi|260175077|ref|ZP_05761489.1| protease IV [Bacteroides sp. D2]
gi|299147649|ref|ZP_07040713.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23]
gi|315923305|ref|ZP_07919545.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|298514436|gb|EFI38321.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 3_1_23]
gi|313697180|gb|EFS34015.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 592
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S + + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLS 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIY------------VKNCGKTYEEVEKTLDRD 187
+ + +D + + ++ L ++ + T E +EK +
Sbjct: 435 YDVVKTNKFADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHMTKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A + G+VD+
Sbjct: 495 VW-TGETAKELGLVDE 509
>gi|317051372|ref|YP_004112488.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum
S5]
gi|316946456|gb|ADU65932.1| signal peptide peptidase SppA, 36K type [Desulfurispirillum indicum
S5]
Length = 277
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 39/186 (20%)
Query: 46 FVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIST 105
FV+G ++D + +L + +NSPGGVVT +Y ++ P+
Sbjct: 50 FVSGALDDFARNPMITGVL------------VRVNSPGGVVTPSQELYSLIRHYPKPVWA 97
Query: 106 FCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGFSGQASDIER 153
F G AAS ++ G+ NAR L + + +
Sbjct: 98 FHDGLAASGALFATIGADRIGTQSTTITGSIGVIIRSINARELYEKIGIEEITVKTGPFK 157
Query: 154 HAQDIVK-IKRRLNEIYVKNCGKTYEEV------EKTLDRD--------HIMSASEACDW 198
+ + + I + G +Y+E + +D+ I S A ++
Sbjct: 158 NILSTNQPLGDDERRILEELIGDSYDEFVNAIASSRDMDKQLLIDIADGRIFSGLRAVEY 217
Query: 199 GVVDKV 204
G+ D++
Sbjct: 218 GLADEI 223
>gi|78779664|ref|YP_397776.1| signal peptide peptidase A [Prochlorococcus marinus str. MIT 9312]
gi|78713163|gb|ABB50340.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49
[Prochlorococcus marinus str. MIT 9312]
Length = 269
Score = 37.7 bits (86), Expect = 1.1, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 69/203 (33%), Gaps = 35/203 (17%)
Query: 35 IYSRLLKERI--VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI 92
+ R K+R+ + + I + L +E I + I+SPGG V I
Sbjct: 4 PFRRKSKKRMARILIDEPITSSTRVSVLKALKQIEDREFPALI-VRIDSPGGTVGDSQEI 62
Query: 93 YDTMQFIKPPISTFCMGQ---AASMGSLLLSAGEK------------GMRFALPNARILL 137
Y ++ +K +AS G + A +K G+ N LL
Sbjct: 63 YSAIKRLKDKGCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELL 122
Query: 138 HQPSGGFSGQA---------SDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVE 181
+ F D + ++ ++E Y + EEV
Sbjct: 123 DKVGIKFETVKSGVFKDILSPDKPLSEEGRRLLQGLIDESYKQFTEAVAEGRNLPVEEVR 182
Query: 182 KTLDRDHIMSASEACDWGVVDKV 204
K D I + ++A + G+VD++
Sbjct: 183 KFSDG-RIFTGTQAKELGLVDEI 204
>gi|160884948|ref|ZP_02065951.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483]
gi|156109298|gb|EDO11043.1| hypothetical protein BACOVA_02940 [Bacteroides ovatus ATCC 8483]
Length = 592
Score = 37.7 bits (86), Expect = 1.2, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S + + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLS 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIY------------VKNCGKTYEEVEKTLDRD 187
+ + +D + + ++ L ++ + T E +EK +
Sbjct: 435 YDVVKTNKYADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHMTKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A + G+VD+
Sbjct: 495 VW-TGETAKELGLVDE 509
>gi|237722788|ref|ZP_04553269.1| protease IV [Bacteroides sp. 2_2_4]
gi|293371818|ref|ZP_06618228.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC
3f]
gi|229447310|gb|EEO53101.1| protease IV [Bacteroides sp. 2_2_4]
gi|292633270|gb|EFF51841.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CMC
3f]
Length = 592
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 33/196 (16%), Positives = 69/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYPSSATSEDGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S + + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMIPNVKGLTDKIGLS 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIY------------VKNCGKTYEEVEKTLDRD 187
+ + +D + + ++ L ++ + T E +EK +
Sbjct: 435 YDVVKTNKYADFGNIMRPFNEDEKSLLQMMITEGYDTFVTRCAEGRHMTKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A + G+VD+
Sbjct: 495 VW-TGETAKELGLVDE 509
>gi|38707715|ref|NP_944888.1| Putative head maturation protease [Enterobacteria phage Felix 01]
gi|33340318|gb|AAQ14669.1|AF320576_99 unknown [Enterobacteria phage Felix 01]
gi|269975290|gb|ACZ55514.1| putative head maturation protease [Staphylococcus phage SA1]
Length = 448
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 159 VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++R+N+ Y G + E V K + + SA EA + G+++ ++
Sbjct: 215 ERLQKRINDTYATFTGFVAESRNLSEEAV-KNTEANVY-SAQEALELGLINSIMS 267
>gi|238801794|ref|YP_002922844.1| putative head maturation protease [Enterobacteria phage WV8]
gi|216263007|gb|ACJ71875.1| putative head maturation protease [Enterobacteria phage WV8]
Length = 448
Score = 37.3 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 159 VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++R+N+ Y G + E V K + + SA EA + G+++ ++
Sbjct: 215 ERLQKRINDTYATFTGFVAESRNLSEEAV-KNTEANVY-SAQEALELGLINSIMS 267
>gi|254445955|ref|ZP_05059431.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium
DG1235]
gi|198260263|gb|EDY84571.1| signal peptide peptidase SppA, 67K type [Verrucomicrobiae bacterium
DG1235]
Length = 598
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 49/150 (32%), Gaps = 3/150 (2%)
Query: 54 HMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAAS 113
+A+ + + + L E + + + + S ++ Y F +P T +G
Sbjct: 365 ALASEVIQREMRLAKE--KMPVVVSMGSVAASGGYWISAYADRIFAQPNTLTGSIGVIGV 422
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
+ A G+ F + ++ + + I +
Sbjct: 423 FFNYEELAATHGVNFDTVKTTEHADLMAQFRPKTEREMSLVQRHVDVIYDSFLAKVAEGR 482
Query: 174 GKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
G E V + + S ++A + G+VD+
Sbjct: 483 GLELEAVAEIAEGRIW-SGADALELGLVDE 511
>gi|3249702|gb|AAC24140.1| unknown [Enterobacteria phage Felix 01]
Length = 442
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 159 VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++R+N+ Y G + E V K + + SA EA + G+++ ++
Sbjct: 215 ERLQKRINDTYATFTGFVAESRNLSEEAV-KNTEANVY-SAQEALELGLINSIMS 267
>gi|195146968|ref|XP_002014455.1| GL18945 [Drosophila persimilis]
gi|198473543|ref|XP_002132515.1| GA25867 [Drosophila pseudoobscura pseudoobscura]
gi|194106408|gb|EDW28451.1| GL18945 [Drosophila persimilis]
gi|198138007|gb|EDY69917.1| GA25867 [Drosophila pseudoobscura pseudoobscura]
Length = 286
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 16/114 (14%), Positives = 34/114 (29%), Gaps = 6/114 (5%)
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQ 156
+F + + + G I+ I HA
Sbjct: 109 EFWTIFQDLWLALHLCGIPTAAAINGHAPAA-----GCIMATACEYRVMLPDFVIGVHAT 163
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRID 210
+ + + VE+ L++ + S EA + G++D+V S+ +
Sbjct: 164 RFSFLVSK-WMMLSYQSVLPRRIVERALNQGKLFSTQEALEVGLIDEVAGSKKE 216
>gi|110633690|ref|YP_673898.1| hypothetical protein Meso_1337 [Mesorhizobium sp. BNC1]
gi|110284674|gb|ABG62733.1| hypothetical protein Meso_1337 [Chelativorans sp. BNC1]
Length = 143
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 12/102 (11%), Positives = 38/102 (37%), Gaps = 14/102 (13%)
Query: 120 SAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLN-------EIYVKN 172
+A G R+++ + + + + ++ ++ +N E Y
Sbjct: 34 AAAVNGFRWSMAHFFFIHRFLLHPPALMVQEAPWTVDELRQMDEMINISANFSTEAYKTC 93
Query: 173 CGKTYEEVEKTLDRDH---IMSASEACDWGVV----DKVLMS 207
EE+ ++ +++A +A + G++ D ++ +
Sbjct: 94 TSMPEEEIRAISYSENQRLVLTAEQAREKGLISGTVDGIIDT 135
>gi|296120521|ref|YP_003628299.1| hypothetical protein Plim_0248 [Planctomyces limnophilus DSM 3776]
gi|296012861|gb|ADG66100.1| hypothetical protein Plim_0248 [Planctomyces limnophilus DSM 3776]
Length = 227
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 77 LYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARIL 136
+YI+S GG G+A+ ++ + G+ +S + L+A + R+ P+A +L
Sbjct: 66 IYIDSCGGNAYVGLALASIIRLRGLRAAAVVTGECSSAALMPLAACRE--RYVTPHASLL 123
Query: 137 LHQPSGGFSGQAS--DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASE 194
H Q + A+ ++ +++ + + E + + +S E
Sbjct: 124 FHPIRWQSDDQLKLEEAVEWARHFRWMESDQDQLLARLFNCSVELITEWSRPGRFLSGRE 183
Query: 195 ACDWGVV 201
D G+
Sbjct: 184 LADAGLA 190
>gi|294338123|emb|CBJ93961.1| Probable phage ClpP protease [Campylobacter phage CP220]
Length = 295
Score = 37.3 bits (85), Expect = 1.4, Method: Composition-based stats.
Identities = 31/141 (21%), Positives = 51/141 (36%), Gaps = 5/141 (3%)
Query: 66 LEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG-QAASMGSLLLSAGEK 124
L I ++I S GG + ++ T + S G++L G
Sbjct: 60 LNDAAEGDSIQIFIASVGGFADELNRFTNIIRTKFYGNVTTVLNPFGYSCGAMLFLIG-- 117
Query: 125 GMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTL 184
R N+ I+ H S G SG+ SD++ K + N T +E+E +
Sbjct: 118 NSRVIYENSSIMFHSVSFGVSGKHSDVKTQFDFSNKYWNEYMKSL-LNPYLTKKEIELLI 176
Query: 185 DR-DHIMSASEACDWGVVDKV 204
D + A E C G+ +
Sbjct: 177 DGVEFWFDAYEMCKRGIATHI 197
>gi|284054392|ref|ZP_06384602.1| hypothetical protein AplaP_23348 [Arthrospira platensis str.
Paraca]
Length = 31
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 15/16 (93%)
Query: 190 MSASEACDWGVVDKVL 205
MSA+EA ++G++D+V+
Sbjct: 1 MSAAEAQEYGLIDQVI 16
>gi|217978751|ref|YP_002362898.1| hypothetical protein Msil_2613 [Methylocella silvestris BL2]
gi|217504127|gb|ACK51536.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 206
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 27/176 (15%), Positives = 65/176 (36%), Gaps = 18/176 (10%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--- 101
+ + GQ+ D M QL L + + + + GG A+ ++ ++
Sbjct: 34 IRLAGQVNDAMHEKFQGQLAAL---SGAGPFVIAMTTLGGDPEVARAMAADLRLLRAAED 90
Query: 102 -PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPS-----------GGFSGQAS 149
S G ++ + R+ + R+++H+ G A
Sbjct: 91 ARFIFLGKSAVYSAGVTFMAGFPRAERWLERDTRLMIHERKLEKNVHFSGPLEGCLSMAL 150
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ ++ ++I+R E + T E+V + ++ + A+EA + +V ++
Sbjct: 151 ALVHEIENGIRIEREGFEALISESPVTLEDVIRKAPQNWYLDAAEALELRLVAGIV 206
>gi|33340432|gb|AAQ14783.1| unknown [Enterobacteria phage Felix 01]
Length = 418
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 159 VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKVLM 206
++++R+N+ Y G + E V K + + SA EA + G+++ ++
Sbjct: 185 ERLQKRINDTYATFTGFVAESRNLSEEAV-KNTEANVY-SAQEALELGLINSIMS 237
>gi|225849669|ref|YP_002729903.1| nodulation competitiveness protein NfeD [Persephonella marina
EX-H1]
gi|225645825|gb|ACO04011.1| nodulation competitiveness protein NfeD [Persephonella marina
EX-H1]
Length = 422
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 22/167 (13%), Positives = 50/167 (29%), Gaps = 2/167 (1%)
Query: 50 QIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMG 109
+ M+ + + E E I + G + I M P +
Sbjct: 27 PVTPVMSDYVKRVIHKAEVEKADAVIIMIDTPGGLDTSMREIIKTIMNSSVPVVVYVYPP 86
Query: 110 QAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
+ + + + + P+ I P + + + I+ +
Sbjct: 87 GSRAASAGAIITVSADIAAMSPSTNIGSASPVQMGGKDIEETMK--KKIINDMVAFVKGI 144
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
K G+ + + K + ++A EA V+D + D+ K +
Sbjct: 145 AKEKGRNEKIIVKMVTESINLTAEEALKKNVIDIIATDLDDLLNKIE 191
>gi|126696719|ref|YP_001091605.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. MIT 9301]
gi|126543762|gb|ABO18004.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. MIT 9301]
Length = 269
Score = 37.3 bits (85), Expect = 1.5, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
RIV + I + L +E I + I+SPGG V IY ++ +K
Sbjct: 15 RIV-IDEPITSSTRVSVLKALKQIEDREFPALI-VRIDSPGGTVGDSQEIYSAIKRLKNK 72
Query: 103 ISTFCMGQ---AASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGFSGQ 147
+AS G + A +K G+ N LL + F
Sbjct: 73 GCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKVGIKFETV 132
Query: 148 A---------SDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDHIMS 191
D + ++ ++E Y + EEV K D I +
Sbjct: 133 KSGVFKDILSPDKPLSEEGRRLLQGLIDESYKQFTEAVADGRNLPVEEVRKFADG-RIFT 191
Query: 192 ASEACDWGVVDKV 204
++A + G+VD+V
Sbjct: 192 GTQAKELGLVDEV 204
>gi|109157467|pdb|2DEO|A Chain A, 1510-N Membrane Protease Specific For A Stomatin Homolog
From Pyrococcus Horikoshii
gi|109157468|pdb|2DEO|B Chain B, 1510-N Membrane Protease Specific For A Stomatin Homolog
From Pyrococcus Horikoshii
Length = 230
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 34/183 (18%), Positives = 65/183 (35%), Gaps = 20/183 (10%)
Query: 44 IVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
IV+ + GQI + + E ++ + I + +++PGG A I +Q K
Sbjct: 9 IVYVAQIKGQITSYTYDQFDRYITIAE-QDNAEAIIIELDTPGGRADAXXNIVQRIQQSK 67
Query: 101 PPISTFCM---GQAASMGSLL-----LSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
P+ + AAS G+ + L A G + Q
Sbjct: 68 IPVIIYVYPPGASAASAGTYIALGSHLIAXAPGTSIGACRPILGYSQNGSIIEAPP---- 123
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIE 212
I + + G+ E+ + +D ++ EA +GV++ V ++
Sbjct: 124 ----KITNYFIAYIKSLAQESGRNATIAEEFITKDLSLTPEEALKYGVIEVVARDINELL 179
Query: 213 EKS 215
+KS
Sbjct: 180 KKS 182
>gi|224536205|ref|ZP_03676744.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus
DSM 14838]
gi|224522189|gb|EEF91294.1| hypothetical protein BACCELL_01072 [Bacteroides cellulosilyticus
DSM 14838]
Length = 589
Score = 37.3 bits (85), Expect = 1.6, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 65/178 (36%), Gaps = 31/178 (17%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAAS 113
+ + L L+ + K + L +NSPGG I+ + +K P+ AAS
Sbjct: 330 SDKVIRDLRKLKDDKDVKAVVLRVNSPGGSAFGSEQIWYAVTELKKEKPVIVSMGDYAAS 389
Query: 114 MGSLLLS------------AGEKGMRFALPNARILLHQPSGGFSGQASD----------- 150
G + G G+ PN + L + F ++
Sbjct: 390 GGYYISCNADSIVADPTTLTGSIGIFGMFPNVKGLTDKIGLSFDVVKTNTYADFGAMGRP 449
Query: 151 -IERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ + + E++VK C G T +E++K + + ++A + G+VD+
Sbjct: 450 LNDGEKALMQNMVNEGYELFVKRCAEGRGMTTDEIKKIAEGRVW-TGTKAKELGLVDE 506
>gi|149176651|ref|ZP_01855263.1| Periplasmic serine protease [Planctomyces maris DSM 8797]
gi|148844530|gb|EDL58881.1| Periplasmic serine protease [Planctomyces maris DSM 8797]
Length = 603
Score = 36.9 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 18/135 (13%), Positives = 40/135 (29%), Gaps = 16/135 (11%)
Query: 85 VVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPN---------ARI 135
A +T I++ C + L+ G + N +
Sbjct: 115 SDKKVFAWIETGMTKDYLIASACDQIVMPESASLILLGLRAEVSFYKNLFDILDIKPDIL 174
Query: 136 LLHQPSGGFSGQASDIERHAQD------IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHI 189
+ + A + ++ + + G + E+VE ++
Sbjct: 175 RVGKYKSAAEPYTRTEMSEAFREEMEALLDNYFGQITGMISASRGLSAEKVEAAINGGPY 234
Query: 190 MSASEACDWGVVDKV 204
M A+EA G++D +
Sbjct: 235 M-AAEAKKLGLIDHI 248
>gi|224159034|ref|XP_002338039.1| predicted protein [Populus trichocarpa]
gi|222870394|gb|EEF07525.1| predicted protein [Populus trichocarpa]
Length = 251
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 23/135 (17%)
Query: 84 GVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGG 143
+ Y + P+ G G+ L A + R A P + + G
Sbjct: 79 DAFDTFYSTYKCVWDSPKPVIAAINGYCLGGGNELAMACD--FRIATPESTFGQPEVKLG 136
Query: 144 FSGQ--ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVV 201
A+ + K + + G T +A EA G++
Sbjct: 137 IVPGGGATYRLATLVGLQKAREIIF------TGNTI-------------NAKEALSLGLI 177
Query: 202 DKVLMSRIDIEEKSK 216
D ++ S IEE K
Sbjct: 178 DSIISSEHLIEEAEK 192
>gi|189346418|ref|YP_001942947.1| carboxyl transferase [Chlorobium limicola DSM 245]
gi|189340565|gb|ACD89968.1| carboxyl transferase [Chlorobium limicola DSM 245]
Length = 564
Score = 36.9 bits (84), Expect = 1.8, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
RD + EA +G +D ++ R
Sbjct: 512 RDKFANPYEAAKYGYIDDIIEPRN 535
>gi|109821899|sp|P84723|CLPP_PINST RecName: Full=Putative ATP-dependent Clp protease proteolytic
subunit; AltName: Full=Endopeptidase Clp; AltName:
Full=PS7/PS12
Length = 80
Score = 36.9 bits (84), Expect = 1.9, Method: Composition-based stats.
Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 6/33 (18%)
Query: 172 NCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
E + LDRD MSA +G+VD V
Sbjct: 35 KTDNPEEVL--DLDRDVFMSA----AYGIVDTV 61
>gi|53714736|ref|YP_100728.1| protease IV [Bacteroides fragilis YCH46]
gi|52217601|dbj|BAD50194.1| protease IV [Bacteroides fragilis YCH46]
Length = 592
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ ++ K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPN----------- 132
K P+ AAS G + A G G+ +PN
Sbjct: 375 ELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLT 434
Query: 133 -ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRD 187
+ +Q S + + + + +++V C + +++EK +
Sbjct: 435 YDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VD+
Sbjct: 495 VW-TGEMAKKIGLVDE 509
>gi|60682742|ref|YP_212886.1| putative protease IV [Bacteroides fragilis NCTC 9343]
gi|60494176|emb|CAH08968.1| putative protease IV [Bacteroides fragilis NCTC 9343]
Length = 592
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ ++ K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPN----------- 132
K P+ AAS G + A G G+ +PN
Sbjct: 375 ELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLT 434
Query: 133 -ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRD 187
+ +Q S + + + + +++V C + +++EK +
Sbjct: 435 YDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VD+
Sbjct: 495 VW-TGEMAKKIGLVDE 509
>gi|309388926|gb|ADO76806.1| protein of unknown function DUF107 [Halanaerobium praevalens DSM
2228]
Length = 427
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 36/171 (21%), Positives = 70/171 (40%), Gaps = 6/171 (3%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
R + + G+I + L ++ + INS GG V + I D++ +
Sbjct: 28 RHLNLEGEIN-NAQYKFIEDNLEQAEKDGVDLFIIEINSLGGFVDPALKIRDSIFAAEIE 86
Query: 103 ISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIK 162
+ TF G+A S +L+ AG++ + P+A I + S + + + +
Sbjct: 87 VITFVKGRAWSAAALIALAGDE--LYISPSASIGAAETRPKEEKYISALRKEFAVTAEHR 144
Query: 163 RRLNEIYVKNCGKTYEEVEKTLDRDHIMS--ASEACDWGVVDKVLMSRIDI 211
+ N + + E+E + D +++ A EA G+ D L S +I
Sbjct: 145 NK-NPEIAEAMVDSSLEIEGIIGVDKLLTLTAKEAITTGIADYRLSSLAEI 194
>gi|255011818|ref|ZP_05283944.1| putative protease IV [Bacteroides fragilis 3_1_12]
gi|313149656|ref|ZP_07811849.1| protease IV [Bacteroides fragilis 3_1_12]
gi|313138423|gb|EFR55783.1| protease IV [Bacteroides fragilis 3_1_12]
Length = 592
Score = 36.9 bits (84), Expect = 2.0, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ ++ K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPN----------- 132
K P+ AAS G + A G G+ +PN
Sbjct: 375 ELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLT 434
Query: 133 -ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRD 187
+ +Q S + + + + +++V C + +++EK +
Sbjct: 435 YDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VD+
Sbjct: 495 VW-TGEMAKKIGLVDE 509
>gi|253565829|ref|ZP_04843283.1| protease IV [Bacteroides sp. 3_2_5]
gi|251944933|gb|EES85371.1| protease IV [Bacteroides sp. 3_2_5]
gi|301164217|emb|CBW23775.1| putative protease IV [Bacteroides fragilis 638R]
Length = 592
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ ++ K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPN----------- 132
K P+ AAS G + A G G+ +PN
Sbjct: 375 ELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLT 434
Query: 133 -ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRD 187
+ +Q S + + + + +++V C + +++EK +
Sbjct: 435 YDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VD+
Sbjct: 495 VW-TGEMAKKIGLVDE 509
>gi|291286449|ref|YP_003503265.1| hypothetical protein Dacet_0511 [Denitrovibrio acetiphilus DSM
12809]
gi|290883609|gb|ADD67309.1| protein of unknown function DUF107 [Denitrovibrio acetiphilus DSM
12809]
Length = 412
Score = 36.9 bits (84), Expect = 2.1, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)
Query: 153 RHAQDIVKIKRRLNEIYVKNCGKTYE-EVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
AQ I + G+ E V D +A EA G+VD+V + ++
Sbjct: 129 HMAQKIENDTVAFMRSIAEKRGRDVESAVSTVTDSKSY-TAKEALSLGLVDQVTNTIDEV 187
Query: 212 EEKS 215
E +
Sbjct: 188 SEAA 191
>gi|300193454|gb|ADJ68233.1| enoyl CoA hydratase [Anopheles sinensis]
Length = 278
Score = 36.5 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 44/131 (33%), Gaps = 20/131 (15%)
Query: 86 VTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFS 145
+ D ++ PI G AA+ G L+++ + M N+ S G
Sbjct: 101 FHKCSELIDAIRSAPIPIIAKVDGLAAAAGCQLVASCD--MAICSDNSTFSTPGASFGIF 158
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+V+ R+ Y+ G SA+EA + G+V KV+
Sbjct: 159 -----CSTPGIAVVRAVPRMKAAYMLFTGLPI-------------SATEALEAGLVSKVV 200
Query: 206 MSRIDIEEKSK 216
EE K
Sbjct: 201 SKDSLDEELDK 211
>gi|189466890|ref|ZP_03015675.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM
17393]
gi|189435154|gb|EDV04139.1| hypothetical protein BACINT_03271 [Bacteroides intestinalis DSM
17393]
Length = 589
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 64/178 (35%), Gaps = 31/178 (17%)
Query: 56 ATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PISTFCMGQAAS 113
+ + L L+ K + L +NSPGG I+ + +K P+ AAS
Sbjct: 330 SEKVIRDLRKLKENEDVKAVVLRVNSPGGSAFGSEQIWYAVTELKKEKPVIVSMGDYAAS 389
Query: 114 MGSLLLS------------AGEKGMRFALPNARILLHQPSGGFSGQASD----------- 150
G + G G+ PN + L + F ++
Sbjct: 390 GGYYISCNADSIVADPTTLTGSIGIFGMFPNVKGLTDKIGLSFDVVKTNTYSDFGMMGRA 449
Query: 151 -IERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRDHIMSASEACDWGVVDK 203
+ + + E++VK C G T +E++K + + ++A + G+VD+
Sbjct: 450 LNDGEKALMQNMVNEGYELFVKRCAEGRGMTTDEIKKIAEGRVW-TGAKAKELGLVDE 506
Score = 34.6 bits (78), Expect = 8.9, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 157 DIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH-IMSASEACDWGVVDKVLMSRI 209
+ I ++ ++ G + E++ + D+ A + ++G+ D ++
Sbjct: 212 FLDGIWGQMLGDISESRGVSKEKLNEAADKMLMFYPAEDCVEYGLADTLIYKND 265
>gi|118083634|ref|XP_416632.2| PREDICTED: hypothetical protein [Gallus gallus]
Length = 1256
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 1 MSFEGCAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKERIVFVT 48
++ G K +E +L + P V E T+ +R ++ +RL +ERIV +
Sbjct: 598 LAAPGFLKDSTESSYLSITPKVPECTSDDQRGQEL-TRLEEERIVILN 644
>gi|116755019|ref|YP_844137.1| hypothetical protein Mthe_1731 [Methanosaeta thermophila PT]
gi|116666470|gb|ABK15497.1| Nodulation efficiency protein NfeD [Methanosaeta thermophila PT]
Length = 421
Score = 36.5 bits (83), Expect = 2.3, Method: Composition-based stats.
Identities = 34/166 (20%), Positives = 71/166 (42%), Gaps = 17/166 (10%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTF 106
+ G I L+ + + E+ N I L +++PGG ++ + I ++ + P+ +
Sbjct: 27 IDGAITPASDDLVKTAIGYAESSNADALI-LMLDTPGGGLSETLEIIAVVERTEIPVVGY 85
Query: 107 CM---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
+A S G+++L + + + PN I QP A++ + I
Sbjct: 86 VSPSGAKAWSAGTMILISTD--IAAMAPNTIIGSAQPVRLLPTGATEPVNDTKTTNAIVA 143
Query: 164 RLNEIYVKNCGKTYEEVEKTLDRDHIMS-----ASEACDWGVVDKV 204
+ E + G+ +T R+ ++S A EA ++GV++ V
Sbjct: 144 LIEEKAKIH-GR-----NRTAAREFVLSNLNLNAEEALEYGVIEHV 183
>gi|154484793|ref|ZP_02027241.1| hypothetical protein EUBVEN_02511 [Eubacterium ventriosum ATCC
27560]
gi|149734641|gb|EDM50558.1| hypothetical protein EUBVEN_02511 [Eubacterium ventriosum ATCC
27560]
Length = 217
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I L +E + + + +N+ GG V G+AI + + + P + +G + S+G
Sbjct: 46 EHILPMLAKIEDDQDIDGLLIILNTVGGDVECGLAIAEMIASLSKPTVSLVLGGSHSIGV 105
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L + + F +P +++H +G + + + KI+ R+N+ + +C
Sbjct: 106 PLAVSAD--YSFIVPTGTMVIHPVR--MNGMFIGVPQTYEYFKKIQERINDFVINHCHIR 161
Query: 177 YEEVEKTLDRDHIMS--------ASEACDWGVVDKV 204
+ ++ I++ + G++D++
Sbjct: 162 ENRFSELMNETEILTKDVGSILVGKQTVKEGIIDEI 197
>gi|313204613|ref|YP_004043270.1| signal peptide peptidase a [Paludibacter propionicigenes WB4]
gi|312443929|gb|ADQ80285.1| signal peptide peptidase A [Paludibacter propionicigenes WB4]
Length = 587
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 71/196 (36%), Gaps = 36/196 (18%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKE-----ISLYINSPGGVVTAGMAIYDTMQF 98
+++ G+I D I A+ + + K+ + L ++SPGG A I+ +
Sbjct: 312 VIYAIGEITDTEGDEIVARDMVKTINDVAKDSAVKAVVLRVSSPGGSAYASEQIWHALSM 371
Query: 99 IKPPISTFCM--GQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGF 144
+K AAS G + +K G+ A+PN + L + +
Sbjct: 372 LKAKKPLIVSMGDYAASGGYYISCLADKIIAQPNTITGSIGIFGAIPNIKGLNEKLGLTY 431
Query: 145 SGQASD------------IERHAQDIVKIKRRLNEIYVKNCGK----TYEEVEKTLDRDH 188
G ++ + R E++VK C + E+++ +
Sbjct: 432 DGVKTNKMSDGISINRSFTPEERDLMQNYVNRGYELFVKRCAQGRKMKVEQIKAIAEGRV 491
Query: 189 IMSASEACDWGVVDKV 204
+ +A G+VDK+
Sbjct: 492 W-TGEDAIKIGLVDKI 506
>gi|255691166|ref|ZP_05414841.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM
17565]
gi|260623069|gb|EEX45940.1| signal peptide peptidase SppA, 67K type [Bacteroides finegoldii DSM
17565]
Length = 592
Score = 36.5 bits (83), Expect = 2.5, Method: Composition-based stats.
Identities = 35/198 (17%), Positives = 72/198 (36%), Gaps = 45/198 (22%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYPGSATSEEGIVGSKVIRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWYAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S G+ + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMGDYAASGGYYISCGADTIVAEPTTLTGSIGIFGMVPNVKELTDKIGLS 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIYV--------------KNCGKTYEEVEKTLD 185
+ + +D + + ++ L ++ V ++ T E +EK +
Sbjct: 435 YDVVKTNKYADFGNIMRPFSEGEKALLQMMVAEGYDTFITRCAEGRHT--TKEAIEKIAE 492
Query: 186 RDHIMSASEACDWGVVDK 203
+ A + G+VD+
Sbjct: 493 GRVW-TGEAAKELGLVDE 509
>gi|265766569|ref|ZP_06094398.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16]
gi|263252946|gb|EEZ24422.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_16]
Length = 592
Score = 36.5 bits (83), Expect = 2.6, Method: Composition-based stats.
Identities = 36/196 (18%), Positives = 70/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ ++ K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSAASDEGIIGSKMIRDLRKLKEDDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPN----------- 132
K P+ AAS G + A G G+ +PN
Sbjct: 375 ELKAKKPVIVSMGDYAASGGYYISCAADSIIAEPTTLTGSIGIFGMIPNVKGLTEKIGLT 434
Query: 133 -ARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC----GKTYEEVEKTLDRD 187
+ +Q S + + + + +++V C + +++EK +
Sbjct: 435 YDVVKTNQFSDFGNLMRPVNSDERALLQMMIGQGYDLFVSRCAEGRHMSKDKIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VDK
Sbjct: 495 VW-TGEMAKKIGLVDK 509
>gi|255705110|emb|CBA13345.1| polyprotein [Cassava brown streak virus]
Length = 2912
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 51/164 (31%), Gaps = 6/164 (3%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCM---GQAAS 113
L L++ EI LY T + I T C +
Sbjct: 337 NGRIENALVLKSNEDLSEIELYSFDLSWARTRDNFFRHFDDDVGKLIRTCCTPSTLWLYA 396
Query: 114 MGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC 173
+ + + P IL+ G + + + + I +
Sbjct: 397 KKARFYKYVDHMILKGSPLVDILVKMEYVGKHLEIFNS-VEDVCLEYAHFMQDVIQEQVN 455
Query: 174 GKTYEEVE--KTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKS 215
++ E + K L R + S E+ + ++D+++ + ++E +
Sbjct: 456 DQSDENIMRVKNLIRSYFDSVIESNKYELIDRIIDKKRELEAQE 499
>gi|18313375|ref|NP_560042.1| enoyl-CoA hydratase [Pyrobaculum aerophilum str. IM2]
gi|18160905|gb|AAL64224.1| enoyl-CoA hydratase [Pyrobaculum aerophilum str. IM2]
Length = 282
Score = 36.5 bits (83), Expect = 2.7, Method: Composition-based stats.
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 190 MSASEACDWGVVDKVL 205
M+A EA G+VD+V+
Sbjct: 190 MTAEEALKLGLVDEVV 205
>gi|153809450|ref|ZP_01962118.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185]
gi|149127910|gb|EDM19132.1| hypothetical protein BACCAC_03765 [Bacteroides caccae ATCC 43185]
Length = 592
Score = 36.1 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 38/196 (19%), Positives = 73/196 (37%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYAGSSASDEGIVGSKVSRDLRKLKDNDDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 --FIKPPISTFCMGQAASMGSLLLSA------------GEKGMRFALPNARILLHQPSGG 143
K P+ AAS G + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMSDYAASGGYYISCAADTIVAEPTTLTGSIGIFGMVPNVKGLTDKIGLT 434
Query: 144 FSGQASDIERHAQDIVK---------IKRRLNEIYVKNCGK-------TYEEVEKTLDRD 187
+ ++ +I++ ++ + E Y G+ T E +EK +
Sbjct: 435 YDVVKTNKYSDFGNIMRPFNEGEKALLQMTITEGYNTFIGRCAEGRHMTKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A + G+VD+
Sbjct: 495 VW-TGEAAKELGLVDE 509
>gi|299822749|ref|ZP_07054635.1| signal peptide peptidase SppA [Listeria grayi DSM 20601]
gi|299816278|gb|EFI83516.1| signal peptide peptidase SppA [Listeria grayi DSM 20601]
Length = 338
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 37/177 (20%), Positives = 62/177 (35%), Gaps = 33/177 (18%)
Query: 59 ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM----QFIKPPISTFCMGQAASM 114
QL +EA+ K I +Y+NSPGG V I D + + K P+ AAS
Sbjct: 93 FMRQLKQIEADKSVKGILMYVNSPGGGVMESAQIRDKLLEIKKKRKLPVYVSMGSMAASG 152
Query: 115 GSLLLSAGEK-------------------GMRFALPNARILLHQPSGGFSGQASDIERHA 155
G + +A +K + I + G R
Sbjct: 153 GYYISTAADKIFASKETLTGSLGVIMQGYDYSGLMKKVGISDNTIKSGAHKDIMSSSRPM 212
Query: 156 QDIVK--IKRRLNEIYVKN-----CGK--TYEEVEKTLDRDHIMSASEACDWGVVDK 203
K +++ +N+ Y + G+ + E+V K D +A G++D+
Sbjct: 213 TKEEKKIMQQMINDSYDEFVNVIATGRHMSKEKVRKIADGRVY-DGRQAKKIGLIDQ 268
>gi|225569105|ref|ZP_03778130.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM
15053]
gi|225161904|gb|EEG74523.1| hypothetical protein CLOHYLEM_05185 [Clostridium hylemonae DSM
15053]
Length = 325
Score = 36.1 bits (82), Expect = 2.9, Method: Composition-based stats.
Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 29/173 (16%)
Query: 60 CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK----PPISTFCMGQAASMG 115
+ FL +++ I LY++SPGG V +Y + K PI + AAS G
Sbjct: 86 MEYIDFLMSDSDNTGILLYVDSPGGTVYESEELYQKLNEYKDATGRPIWGYMAHYAASGG 145
Query: 116 SLLLSAGEKGM------------------------RFALPNARILLHQPSGGFSGQASDI 151
+ A + + + I + I
Sbjct: 146 YYVSMAADNIYANPNTVTGSIGVIMAGYDMSGLYEKLGIRYVSITSGKNKDSSKLDEDQI 205
Query: 152 ERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+ + + R +I + +EV+K D +A +A + G++D +
Sbjct: 206 AIYQTQVDESFGRFVDIVADGRDMSSDEVKKLADGRTY-TAKQAKENGLIDNI 257
>gi|260557404|ref|ZP_05829619.1| GP47 [Acinetobacter baumannii ATCC 19606]
gi|260409030|gb|EEX02333.1| GP47 [Acinetobacter baumannii ATCC 19606]
Length = 365
Score = 36.1 bits (82), Expect = 3.0, Method: Composition-based stats.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 6 CAKKDSEDVFLGLVPMVVEQTNRGERSYDIYSRLLKER-IVFVTGQIEDHMATLICAQLL 64
+ K + ++ VP+ VE + +++ ++S+LLKER + + + D I Q+L
Sbjct: 251 SSAKAIQQLYPQHVPLTVEDLSHNDQANQLFSQLLKERHHIEIHQNLFDETKHQI--QML 308
Query: 65 FLEAE 69
+AE
Sbjct: 309 MKDAE 313
>gi|254470192|ref|ZP_05083596.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudovibrio sp. JE062]
gi|211960503|gb|EEA95699.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Pseudovibrio sp. JE062]
Length = 80
Score = 36.1 bits (82), Expect = 3.1, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 39 LLKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSP 82
L R V +TG + MA +C++LL L ++ I++ + S
Sbjct: 32 LFDARTVLITGPVTQEMAQDVCSRLLAL-SQVSNDPITVIVLSG 74
>gi|56460146|ref|YP_155427.1| putative periplasmic protease [Idiomarina loihiensis L2TR]
gi|56179156|gb|AAV81878.1| Periplasmic serine protease, ClpP family [Idiomarina loihiensis
L2TR]
Length = 332
Score = 36.1 bits (82), Expect = 3.2, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 41/121 (33%), Gaps = 22/121 (18%)
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKR 163
C+G M + G G+ +PN LL + + F + + I
Sbjct: 167 MMACVGHKL-MAAPFAFIGSIGVVAQIPNFHRLLKKHNVDFEQL---TAGEYKRTLTIFG 222
Query: 164 RLNEIYVKNCGKTYEEVEK-------------TLDR----DHIMSASEACDWGVVDKVLM 206
+ + + E + + +D+ + S EA + G++D+V+
Sbjct: 223 ENTDEGRRKFKQDLEAIHRQFKSFVQENRSELDIDKVATGEVW-SGQEAKELGLIDEVIT 281
Query: 207 S 207
S
Sbjct: 282 S 282
>gi|123966585|ref|YP_001011666.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. MIT 9515]
gi|123200951|gb|ABM72559.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. MIT 9515]
Length = 269
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 38/193 (19%), Positives = 65/193 (33%), Gaps = 34/193 (17%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
RIV + I + L +E I L I+SPGG V IY ++ ++
Sbjct: 15 RIV-IDEPITSSTRVSVIKALKQIEDREFPALI-LRIDSPGGTVGDSQEIYSAIKRLREK 72
Query: 103 ISTFCMGQ---AASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGFSGQ 147
+AS G + A K G+ N LL++ F
Sbjct: 73 GCKVVASFGNISASGGVYIGVASNKIVANPGTITGSIGVIIRGNNLSELLNKIGIKFETV 132
Query: 148 A---------SDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDHIMS 191
D + ++ ++E Y + E+V+K D I +
Sbjct: 133 KSGIYKDILSPDKPLSDEGREILQGLIDESYKQFTEAVAEGRDLPVEDVKKFADG-RIFT 191
Query: 192 ASEACDWGVVDKV 204
++A G+VD++
Sbjct: 192 GTQAKKLGLVDEI 204
>gi|289582290|ref|YP_003480756.1| peptidase S49 [Natrialba magadii ATCC 43099]
gi|289531843|gb|ADD06194.1| peptidase S49 [Natrialba magadii ATCC 43099]
Length = 328
Score = 36.1 bits (82), Expect = 3.4, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 61/179 (34%), Gaps = 22/179 (12%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
++ V I + A I A L + L ++SPGG VTA +Y + +
Sbjct: 50 VIEVDQSITEASAADITADLAEARENESIDAVVLDVDSPGGGVTASEQLYLAVDRTAAEM 109
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARI--------------LLHQPSGGFSGQAS 149
Q+ + + P++ + + + + G +
Sbjct: 110 PVVTSVQSMGTSGAYYMSAPTDEMYVSPSSTVGSIGVRATHLDSPPMDGEVTTGPDKGSM 169
Query: 150 DIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRD----HIMSASEACDWGVVDKV 204
++ ++K+ +++ G E +R+ + +EA + G+ D++
Sbjct: 170 TADQVKDQTEQMKQTFLGSVLEHRGDELE----LTERELSYAKVYIGTEAVENGLADEI 224
>gi|288560933|ref|YP_003424419.1| peptidase S49 family [Methanobrevibacter ruminantium M1]
gi|288543643|gb|ADC47527.1| peptidase S49 family [Methanobrevibacter ruminantium M1]
Length = 285
Score = 36.1 bits (82), Expect = 3.5, Method: Composition-based stats.
Identities = 12/69 (17%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 148 ASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMS 207
A+D+ + + + + +N T + V + + +EA G++D++
Sbjct: 181 ANDLANAQKMVDQDYTLFIKKIAENRNLTADYVAELAHGKKY-NGNEAKKLGLIDEIGSK 239
Query: 208 RIDIEEKSK 216
IE+ +K
Sbjct: 240 SQSIEKAAK 248
>gi|120601287|ref|YP_965687.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris
DP4]
gi|120561516|gb|ABM27260.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49
[Desulfovibrio vulgaris DP4]
Length = 296
Score = 35.8 bits (81), Expect = 3.7, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 70/191 (36%), Gaps = 35/191 (18%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
IV + G I D A + L + + + + ++SPGG V ++D ++ +
Sbjct: 52 IVRIEGMIGD--ARKTLEWMRKLAEDRTVRGVLVRVDSPGGAVAPSQELHDAVKRLAADK 109
Query: 104 STFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQ---------- 139
G S G+ + A G G++ +PN + L+ +
Sbjct: 110 PVVVSMGSLAASGGLMVSTGATRIVANPATITGSIGVKMEMPNVQGLMDKLGVARQTLVS 169
Query: 140 -------PSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+A + I+++ + + ++ E+V D I++
Sbjct: 170 GDLKDAGSPFRAMSEA-ERAYFQSIIMEMYGQFVSMIAEDRNIPVEKVRSFADG-RILTG 227
Query: 193 SEACDWGVVDK 203
S+A + G+VDK
Sbjct: 228 SQALELGLVDK 238
>gi|326795267|ref|YP_004313087.1| peptidase S49 [Marinomonas mediterranea MMB-1]
gi|326546031|gb|ADZ91251.1| peptidase S49 [Marinomonas mediterranea MMB-1]
Length = 367
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 10/35 (28%)
Query: 184 LDRDHI----MSASEACDWGVVD------KVLMSR 208
L+RD + +A +G++D VL SR
Sbjct: 295 LERDLFTGMVFTGEQAVSYGLIDGLDYTGHVLSSR 329
>gi|237713852|ref|ZP_04544333.1| protease IV [Bacteroides sp. D1]
gi|262409239|ref|ZP_06085783.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22]
gi|294647614|ref|ZP_06725184.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC
2a]
gi|294810039|ref|ZP_06768712.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens
SD CC 1b]
gi|298482326|ref|ZP_07000513.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22]
gi|229446008|gb|EEO51799.1| protease IV [Bacteroides sp. D1]
gi|262352986|gb|EEZ02082.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 2_1_22]
gi|292637046|gb|EFF55494.1| signal peptide peptidase SppA, 67K type [Bacteroides ovatus SD CC
2a]
gi|294442755|gb|EFG11549.1| signal peptide peptidase SppA, 67K type [Bacteroides xylanisolvens
SD CC 1b]
gi|295085355|emb|CBK66878.1| signal peptide peptidase A. Serine peptidase. MEROPS family S49
[Bacteroides xylanisolvens XB1A]
gi|298271613|gb|EFI13187.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. D22]
Length = 592
Score = 35.8 bits (81), Expect = 3.8, Method: Composition-based stats.
Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 41/196 (20%)
Query: 48 TGQIEDH----------MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ + + + L L+ +N K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYPSSATSEDGIVGSKVIRDLRKLKDDNDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S + + A G G+ +PN + L +
Sbjct: 375 ELKTKKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGIIPNVKGLTDKIGLS 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIY------------VKNCGKTYEEVEKTLDRD 187
+ + +D + + +R L ++ + T E +EK +
Sbjct: 435 YDVVKTNKYADFGNIMRPFNEDERSLLQMMITEGYDTFVSRCAEGRHMTKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVDK 203
+ A G+VD+
Sbjct: 495 VW-TGETAKKLGLVDE 509
>gi|260494495|ref|ZP_05814625.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33]
gi|260197657|gb|EEW95174.1| signal peptide peptidase SppA, 67K type [Fusobacterium sp. 3_1_33]
Length = 551
Score = 35.8 bits (81), Expect = 3.9, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 36/195 (18%)
Query: 44 IVFVTGQIEDHMATL-------ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G+I+ + + +L LE K + L INSPGG IY +
Sbjct: 287 IINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQKL 346
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGF 144
+ ++ PI AS G + + G+K G+ P +++
Sbjct: 347 KKLEIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKLKVNM 406
Query: 145 SGQASDIERHAQDI---------VKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDH 188
G + DI KI +NE+Y + + E++EK
Sbjct: 407 EGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIAGGRV 466
Query: 189 IMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 467 WL-GSQAKENGLVDE 480
>gi|242398488|ref|YP_002993912.1| Putative protease [Thermococcus sibiricus MM 739]
gi|242264881|gb|ACS89563.1| Putative protease [Thermococcus sibiricus MM 739]
Length = 335
Score = 35.8 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ--FIKP 101
I+ V G I++ A + +++ + ++ + L+I SPGG V + IY ++ +
Sbjct: 95 ILPVVGPIDETAAFDVISKIREIRNDDNIGGVVLWIESPGGYVGPVITIYKELKKLSYEK 154
Query: 102 PISTFCMGQAASMGSLLLSAGEK 124
PI + G AAS G L+ A +K
Sbjct: 155 PIVAYTGGMAASGGYLIACAADK 177
>gi|260890123|ref|ZP_05901386.1| hypothetical protein GCWU000323_01285 [Leptotrichia hofstadii
F0254]
gi|260860146|gb|EEX74646.1| signal peptide peptidase SppA, 36K type [Leptotrichia hofstadii
F0254]
Length = 262
Score = 35.8 bits (81), Expect = 4.0, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 64/176 (36%), Gaps = 29/176 (16%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
+C +L L+ K + L INSPGG IY ++ + PI AS G
Sbjct: 19 ENVCEKLEELKEIKNLKGLVLRINSPGGSALVSEKIYKKLKKLTVPIYVSMGDVCASGGY 78
Query: 117 LLLSAGEK----GMRFALPNARILLHQPSGGFSGQA------------SDIERHAQDI-- 158
+ + G+K ++++ G + D+ + +
Sbjct: 79 YIATTGKKLFANNFTLTGSIGVVMMYPEVTGTMKKLDINLEGFGKGAGFDMLNPFEKLGE 138
Query: 159 ---VKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
K+ +NE+Y + G EE+EK + SEA + +VD++
Sbjct: 139 DSKEKLIHNMNEVYGEFKEHVMVARGMNDEELEKIAQGRVWL-GSEAKNINLVDEI 193
>gi|284053406|ref|ZP_06383616.1| hypothetical protein AplaP_18249 [Arthrospira platensis str.
Paraca]
Length = 21
Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 9/20 (45%), Positives = 16/20 (80%)
Query: 190 MSASEACDWGVVDKVLMSRI 209
MSA+EA ++G++D+V+ R
Sbjct: 1 MSAAEAHEYGLIDQVIEERS 20
>gi|189499532|ref|YP_001959002.1| signal peptide peptidase SppA, 67K type [Chlorobium
phaeobacteroides BS1]
gi|189494973|gb|ACE03521.1| signal peptide peptidase SppA, 67K type [Chlorobium
phaeobacteroides BS1]
Length = 596
Score = 35.8 bits (81), Expect = 4.1, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 7/53 (13%)
Query: 159 VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
+I+ L+ +Y G E E ++ ++SA +A + VVD+V
Sbjct: 200 ERIEMSLDSVYAAYTGYVTKQRDIPLETYEIIINEKTVLSADQAKELKVVDEV 252
>gi|291276786|ref|YP_003516558.1| protease [Helicobacter mustelae 12198]
gi|290963980|emb|CBG39819.1| protease [Helicobacter mustelae 12198]
Length = 286
Score = 35.8 bits (81), Expect = 4.3, Method: Composition-based stats.
Identities = 33/189 (17%), Positives = 64/189 (33%), Gaps = 31/189 (16%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPIS 104
+++ G I D + I Q+ ++A K L INSPGG V+A + I D ++ + I
Sbjct: 49 IYLHGPIIDSTS--IYEQIKKIKANPNIKGALLLINSPGGAVSASVEISDMIRELNQRIP 106
Query: 105 TFCMGQAASMGSLLLS--------------AGEKGMRFALPNAR-----ILLHQPSGGFS 145
Q G G+ F+ N + I + Q
Sbjct: 107 VVAYVQGVMASGSYYGGMYSKQIFANRGALIGSIGVIFSSMNIQNLMQKIGVSQQGVSAG 166
Query: 146 GQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV--EKTLDRDHI--------MSASEA 195
+ + + + + ++V + LD+ + +A A
Sbjct: 167 AYKEVGTPLRKWTPEEYAYIKNLIQEEYQMFIDDVSDARKLDKHNYKSFAEGKIFTAKNA 226
Query: 196 CDWGVVDKV 204
G++D++
Sbjct: 227 QKLGLIDEI 235
>gi|225378146|ref|ZP_03755367.1| hypothetical protein ROSEINA2194_03806 [Roseburia inulinivorans DSM
16841]
gi|225209952|gb|EEG92306.1| hypothetical protein ROSEINA2194_03806 [Roseburia inulinivorans DSM
16841]
Length = 231
Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 74/184 (40%), Gaps = 24/184 (13%)
Query: 41 KERIVFVT--GQIEDHMA----------TLICAQLLFLEAENPQKEISLYINSPGGVVTA 88
++RI +T G+IE H + +L +E + L +N+ GG V +
Sbjct: 27 EDRISMLTIIGEIEGHECLPAATKTTKYEHVLPKLAEVEENKNVDGLLLLLNTVGGDVES 86
Query: 89 GMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQA 148
G+AI + + I P + +G S + A F +P+ +++H +G
Sbjct: 87 GLAIAEMVASIDKPTVSLVLG--GSHSIGVPLAVSTDYSFIVPSGTMVIHPVR--MNGTV 142
Query: 149 SDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSAS--------EACDWGV 200
+ +++ R+ + V++ +E+ + I++ +A + G+
Sbjct: 143 IGAQPTYDYFKQMQDRILKFVVQHSKAEQNRLEELMMNTGILTKDLGTILVGGQAVEEGL 202
Query: 201 VDKV 204
+D +
Sbjct: 203 IDSI 206
>gi|254471425|ref|ZP_05084827.1| 3-hydroxybutyryl-CoA dehydratase [Pseudovibrio sp. JE062]
gi|211959571|gb|EEA94769.1| 3-hydroxybutyryl-CoA dehydratase [Pseudovibrio sp. JE062]
Length = 271
Score = 35.8 bits (81), Expect = 4.5, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 37/107 (34%), Gaps = 20/107 (18%)
Query: 99 IKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDI 158
PI G A G+ L +A + + A N + + G+ +A+
Sbjct: 117 CPKPIVAAVQGYAVGGGAFLAAACD--VVIAAENVKFKGMEVPNGWITPWGFHALNARMA 174
Query: 159 VKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
+ +R Y M+A+EA G+VD+V+
Sbjct: 175 PRHAQRAAWGY------------------KFMTATEALRTGLVDEVV 203
>gi|325680800|ref|ZP_08160338.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
gi|324107580|gb|EGC01858.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus albus 8]
Length = 229
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 28/154 (18%), Positives = 57/154 (37%), Gaps = 12/154 (7%)
Query: 57 TLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGS 116
I L+ +E ++ + + + +N+ GG V AG+AI + + + P + +G S+G
Sbjct: 56 EHIIPALVAVEQDSDIEGLLIVLNTVGGDVEAGLAIAELIAGMSTPTVSLVVGGGHSIGV 115
Query: 117 LLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKT 176
L ++ I SG + + K++ R+ N
Sbjct: 116 PLAVCADRSFIVPTATMTI----HPVRMSGTVLGVPQTMSYFYKMQERIVSFVCGNSSIK 171
Query: 177 YEEVEKTL--------DRDHIMSASEACDWGVVD 202
E + + D ++ EA G++D
Sbjct: 172 PERFRELMMSTGELMTDIGTVLEGDEAVKEGLID 205
>gi|254779313|ref|YP_003057418.1| excinuclease ABC subunit A [Helicobacter pylori B38]
gi|254001224|emb|CAX29194.1| UvrABC system protein A (UvrA protein) (Excinuclease ABC subunit A)
[Helicobacter pylori B38]
Length = 941
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 37/203 (18%)
Query: 9 KDSEDVFLGLVPMV-VEQ--TNRGERS--------YDIYSRLLKERI-----VFVTGQIE 52
K + D GL P + ++Q T++ RS YD Y RLL RI + I
Sbjct: 76 KPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYD-YLRLLFARIGEQFCPTCSEPIS 134
Query: 53 DHMATLICAQLLFLEAENPQKEI--SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
A+ I +Q+ LE EN + I + + G ++ +K + F G
Sbjct: 135 SMSASDIISQICHLE-ENSKIIILAPIIKDKKGSFNDKLESL-----RLKGYVRAFVDGV 188
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD-------IERHAQDIVKIKR 163
+ + K R++++ + A + E + +
Sbjct: 189 MVRLDEEIHLHKTKKHTIEAVVDRVVINSENASRIASAIEKALKESYGELEVEILQDNAP 248
Query: 164 RLNEIYVKN-----CGKTYEEVE 181
+ + Y ++ C ++EE+E
Sbjct: 249 SIRKHYSEHKACFKCKMSFEELE 271
>gi|88859293|ref|ZP_01133933.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata
D2]
gi|88818310|gb|EAR28125.1| protease IV, a signal peptide peptidase [Pseudoalteromonas tunicata
D2]
Length = 624
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Query: 158 IVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
I + R I + G + EEV+ + A++A + G+VD + + IE +K
Sbjct: 480 IERGYNRFLTIVAEARGMSIEEVDHIAQGRVWI-ATQAKELGLVDHLGNKQDAIEAAAK 537
>gi|311747477|ref|ZP_07721262.1| serine protease, ClpP class [Algoriphagus sp. PR1]
gi|311302671|gb|EAZ79206.2| serine protease, ClpP class [Algoriphagus sp. PR1]
Length = 449
Score = 35.8 bits (81), Expect = 4.6, Method: Composition-based stats.
Identities = 34/176 (19%), Positives = 58/176 (32%), Gaps = 25/176 (14%)
Query: 43 RIVF---VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
+ +F + I+ M L E I + +++ GG V I +
Sbjct: 27 KTIFSFKIDDDIDPAM-NRRVKLALEKAKEESADLILIEMDTYGGAVNDADDIRTMLLES 85
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
+ PI F AAS G+L+ A +K F P + I G D
Sbjct: 86 EIPIQVFINKDAASAGALISIACDK--IFMAPGSSIGAATVVNGT-----DGAAAPDKYQ 138
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHI-------------MSASEACDWGVVD 202
R + + G+ ++ + + ++I S SEA +G D
Sbjct: 139 SYMRSMMRSTAEAKGRDP-KIAEAMVDENIEVEGVSEKGSVVTFSVSEAIKYGFCD 193
>gi|159897941|ref|YP_001544188.1| AraC family transcriptional regulator [Herpetosiphon aurantiacus
ATCC 23779]
gi|159890980|gb|ABX04060.1| transcriptional regulator, AraC family [Herpetosiphon aurantiacus
ATCC 23779]
Length = 281
Score = 35.8 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 17/38 (44%)
Query: 143 GFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEV 180
Q DI +A + K +L +I ++ G+ + +
Sbjct: 187 QAFQQHHDIHYYADQLNLSKTQLAQIISQHSGQPPKRI 224
>gi|222056580|ref|YP_002538942.1| protein of unknown function DUF107 [Geobacter sp. FRC-32]
gi|221565869|gb|ACM21841.1| protein of unknown function DUF107 [Geobacter sp. FRC-32]
Length = 423
Score = 35.8 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 30/164 (18%), Positives = 64/164 (39%), Gaps = 7/164 (4%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
R + ++G I +A + L EA + + + +++PGG+ +A + P
Sbjct: 26 RKISISGPITPVVAGYLQRNLQEAEA-GRENLMLITMDTPGGLDSAMRDSVKLIMSSTVP 84
Query: 103 ISTFCM-GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
+ + A + + + A + P I P G+ D + +
Sbjct: 85 VVVYVAPSGARAASAGAVIALAADICAMAPGTNIGAAHPV--TMGEKPDKVMMDKVVNDA 142
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHI-MSASEACDWGVVDKV 204
+ L I K GK ++ + R+ + +SA +A D ++D +
Sbjct: 143 EAYLEGIAAKR-GKNV-KLAGQMVRESLSLSADKALDGKIIDMI 184
>gi|77919555|ref|YP_357370.1| membrane-bound serine protease (ClpP class) [Pelobacter
carbinolicus DSM 2380]
gi|77545638|gb|ABA89200.1| Nodulation efficiency protein NfeD [Pelobacter carbinolicus DSM
2380]
Length = 470
Score = 35.8 bits (81), Expect = 4.7, Method: Composition-based stats.
Identities = 38/176 (21%), Positives = 66/176 (37%), Gaps = 6/176 (3%)
Query: 43 RI--VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK 100
RI V + G I +A + +L + E L I++PGG+ +A I M +
Sbjct: 46 RIGAVRIAGPINPVVAEFVTQELDRINREEAVA-FLLEIDTPGGLDSAMRQIIKGMLGSQ 104
Query: 101 PPISTFCM-GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
P+ F A + + L A P + P GQ + +V
Sbjct: 105 IPVIVFVSPSGARAASAGALIALAADFAVMAPGTNLGAAHPVAIGGGQKPPDDVMMNKVV 164
Query: 160 KIKRRLNEIYVKNCGKTYEEVEKTLDRDHI-MSASEACDWGVVDKVLMSRIDIEEK 214
+ G++ E + + R+ +SA EA GV+D + R ++ +K
Sbjct: 165 EDAAAYARSLAARRGRS-EIWAEKMVRESASISAREALQHGVIDLIAEDRAELLKK 219
>gi|91773747|ref|YP_566439.1| nodulation efficiency protein NfeD [Methanococcoides burtonii DSM
6242]
gi|91712762|gb|ABE52689.1| protein with NfeD-like domain [Methanococcoides burtonii DSM 6242]
Length = 437
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 34/165 (20%), Positives = 61/165 (36%), Gaps = 11/165 (6%)
Query: 55 MATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASM 114
+A + L L +N + + + +N+PGG V + I + + P+ +G
Sbjct: 43 VADDLVIDALQLAEQNEYEALIITLNTPGGGVDETLKIIEAIDRSDIPV----IGYVYPG 98
Query: 115 GSLLLSAGE-----KGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIY 169
G+ SAG + PN I QP IV L +
Sbjct: 99 GTKAWSAGTLILIGTDIAAMSPNTIIGSAQPVSVSPQGIE--PIEDDKIVNALVALAKTK 156
Query: 170 VKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEK 214
K G+ EK + + ++ EA + G+++ V D+ E+
Sbjct: 157 AKQHGRNETTAEKFITENLNLNDEEALEAGIIEYVASDIDDLLEQ 201
>gi|256026400|ref|ZP_05440234.1| protease IV [Fusobacterium sp. D11]
Length = 334
Score = 35.4 bits (80), Expect = 4.9, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 40/197 (20%)
Query: 44 IVFVTGQIEDHMATL-------ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G+I+ + + +L LE K + L INSPGG IY +
Sbjct: 70 IINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQKL 129
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALP-----------NA 133
+ ++ PI AS G + + G+K G+ P N
Sbjct: 130 KKLEIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKLKVNM 189
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDR 186
S + ++ KI +NE+Y + + E++EK
Sbjct: 190 EGFSKGKGFDIFDVFSKLSEESK--EKIIYSMNEVYSEFKEHVIQARNISEEDLEKIAGG 247
Query: 187 DHIMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 248 RVWL-GSQAKENGLVDE 263
>gi|13541746|ref|NP_111434.1| enoyl-CoA hydratase [Thermoplasma volcanium GSS1]
Length = 246
Score = 35.4 bits (80), Expect = 5.0, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K +++ + R +++ EA + G+VD ++ + + E
Sbjct: 150 KNVKKLAINMPR---LTSEEALNLGLVDMIIEDKNKLTE 185
>gi|188585819|ref|YP_001917364.1| protein of unknown function DUF107 [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350506|gb|ACB84776.1| protein of unknown function DUF107 [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 458
Score = 35.4 bits (80), Expect = 5.1, Method: Composition-based stats.
Identities = 31/160 (19%), Positives = 58/160 (36%), Gaps = 21/160 (13%)
Query: 67 EAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGM 126
E I L IN+PGG + A I D + + P+ F QA S GS L A ++
Sbjct: 66 AQEENADLIVLDINTPGGALDASFEIKDLIVNEEIPVYAFVNSQAISAGSYLALASDEIY 125
Query: 127 RFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDR 186
+ + G + E + ++ + K + + + R
Sbjct: 126 ---------MRPTGTMGAAEARMGTEVADEKVMSVWETEMRTVAKERDRDPDIAAAMVRR 176
Query: 187 D------------HIMSASEACDWGVVDKVLMSRIDIEEK 214
+ +SA EA + G+ + ++ + ++ EK
Sbjct: 177 EMEIEGLVSENQLLTLSAEEAKEHGMAEGIVNNYDELLEK 216
>gi|237744633|ref|ZP_04575114.1| protease IV [Fusobacterium sp. 7_1]
gi|229431862|gb|EEO42074.1| protease IV [Fusobacterium sp. 7_1]
Length = 551
Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 41/195 (21%), Positives = 72/195 (36%), Gaps = 36/195 (18%)
Query: 44 IVFVTGQIEDHMATL-------ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G+I+ + + +L LE K + L INSPGG IY +
Sbjct: 287 IINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQKL 346
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGF 144
+ ++ PI AS G + + G+K G+ P +++
Sbjct: 347 KKLEIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKLKVNM 406
Query: 145 SGQASDIERHAQDI---------VKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDH 188
G + DI KI +NE+Y + + E++EK
Sbjct: 407 EGFSKGKGFDIFDIFSKLSEESKEKIIYSMNEVYSEFKEHVIQARNISEEDLEKIAGGRV 466
Query: 189 IMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 467 WL-GSQAKENGLVDE 480
>gi|295400859|ref|ZP_06810835.1| Enoyl-CoA hydratase/isomerase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294977122|gb|EFG52724.1| Enoyl-CoA hydratase/isomerase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 269
Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 186 RDHIM-----SASEACDWGVVDKVLMSRIDIEEKSK 216
R+ M SA EA + G+++KV+ +EE K
Sbjct: 162 REIWMLCRQYSADEALNMGLINKVVEPSGLMEEARK 197
>gi|312111289|ref|YP_003989605.1| enoyl-CoA hydratase/isomerase [Geobacillus sp. Y4.1MC1]
gi|311216390|gb|ADP74994.1| Enoyl-CoA hydratase/isomerase [Geobacillus sp. Y4.1MC1]
Length = 269
Score = 35.4 bits (80), Expect = 5.2, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 5/36 (13%)
Query: 186 RDHIM-----SASEACDWGVVDKVLMSRIDIEEKSK 216
R+ M SA EA + G+++KV+ +EE K
Sbjct: 162 REIWMLCRQYSADEALNMGLINKVVEPSGLMEEARK 197
>gi|70607917|ref|YP_256787.1| 3-hydroxybutyryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM
639]
gi|68568565|gb|AAY81494.1| 3-hydroxybutyryl-CoA dehydrogenase [Sulfolobus acidocaldarius DSM
639]
Length = 657
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 189 IMSASEACDWGVVDKVLMS 207
MSA +A + G+VD V+
Sbjct: 565 WMSAKQAKELGLVDIVVPH 583
>gi|332179696|gb|AEE15385.1| signal peptide peptidase SppA, 36K type [Thermodesulfobium
narugense DSM 14796]
Length = 289
Score = 35.4 bits (80), Expect = 5.3, Method: Composition-based stats.
Identities = 34/191 (17%), Positives = 65/191 (34%), Gaps = 33/191 (17%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIK---- 100
+ + G I D + + + + + + + I L +NSPGG V A I++T+ K
Sbjct: 38 IEINGTINDQTSESVSSAIRRAKQDPNIRGILLRVNSPGGSVGASQEIFETLMNYKESTG 97
Query: 101 PPISTFCMGQAASMGSLLLSAGEKGMR-----------------FALPNARILLHQPSGG 143
PI AAS G + AG+K I + + +
Sbjct: 98 KPIIVSMGDVAASGGYYVSLAGDKIFALPSTLTGSIGVIANILDIHELMKNIGIKEETLK 157
Query: 144 FSGQASDIERHAQDIVKIKRRLNEIYVKNCGK-----------TYEEVEKTLDRDHIMSA 192
K K L + + G+ ++++ D + S
Sbjct: 158 TGEYKDTGSMFRSLTPKDKEYLMGLIGDSYGQFLYDVSTRRNIPLDKLKSIADG-RVFSG 216
Query: 193 SEACDWGVVDK 203
++A G++D+
Sbjct: 217 AKAKSLGLIDE 227
>gi|108563115|ref|YP_627431.1| excinuclease ABC subunit A [Helicobacter pylori HPAG1]
gi|107836888|gb|ABF84757.1| excinuclease ABC subunit A [Helicobacter pylori HPAG1]
Length = 941
Score = 35.4 bits (80), Expect = 5.4, Method: Composition-based stats.
Identities = 39/203 (19%), Positives = 73/203 (35%), Gaps = 37/203 (18%)
Query: 9 KDSEDVFLGLVPMV-VEQ--TNRGERS--------YDIYSRLLKERI-----VFVTGQIE 52
K + D GL P + ++Q T++ RS YD Y RLL RI + I
Sbjct: 76 KPNVDKIEGLTPAIAIDQKTTSKNPRSTVGTITEIYD-YLRLLFARIGEQFCPTCSEPIS 134
Query: 53 DHMATLICAQLLFLEAENPQKEI--SLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQ 110
A+ I +Q+ LE EN + I + + G ++ +K + F G
Sbjct: 135 SMSASDIISQICHLE-ENSKIIILAPIIKDKKGSFNDKLESL-----RLKGYVRAFVDGV 188
Query: 111 AASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASD-------IERHAQDIVKIKR 163
+ + K R++++ + A + E + +
Sbjct: 189 MVRLDEEIHLHKTKKHTIEAVVDRVVINSENASRIASAVEKALKESYGELEVEILQDNAP 248
Query: 164 RLNEIYVKN-----CGKTYEEVE 181
+ + Y ++ C ++EE+E
Sbjct: 249 SIRKHYSEHKACFKCKMSFEELE 271
>gi|298385314|ref|ZP_06994873.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14]
gi|298262458|gb|EFI05323.1| signal peptide peptidase SppA, 67K type [Bacteroides sp. 1_1_14]
Length = 593
Score = 35.4 bits (80), Expect = 5.5, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 68/195 (34%), Gaps = 41/195 (21%)
Query: 48 TGQIEDHMAT----------LICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQ 97
+G+I D+ ++ + L L+ + K + L +NSPGG A I+ ++
Sbjct: 315 SGEITDYSSSSTSEEGIVGTKVIRDLRKLKDDEDVKAVVLRVNSPGGSAFASEQIWHAVK 374
Query: 98 FIKPPISTFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQPSGG 143
+K G S + + A G G+ +PN + L +
Sbjct: 375 ELKTEKPVIVSMGDYAASGGYYISCVADTIVAEPTTLTGSIGIFGMVPNVKELSEKIGLT 434
Query: 144 FS----GQASDIERHAQDIVKIKRRLNEIY------------VKNCGKTYEEVEKTLDRD 187
+ + SD + + ++ L ++ + + E +EK +
Sbjct: 435 YDVVKTNKFSDFGNIMRPFNQDEKTLMQMMITQGYDTFVNRCAEGRHMSKEAIEKIAEGR 494
Query: 188 HIMSASEACDWGVVD 202
+ A + G+VD
Sbjct: 495 VW-TGEAAKELGLVD 508
>gi|239833088|ref|ZP_04681417.1| enoyl-CoA hydratase/isomerase [Ochrobactrum intermedium LMG 3301]
gi|239825355|gb|EEQ96923.1| enoyl-CoA hydratase/isomerase [Ochrobactrum intermedium LMG 3301]
Length = 283
Score = 35.4 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 190 MSASEACDWGVVDKVLMSRIDIEEKS 215
+A EA G+VD V+ + ++
Sbjct: 192 FTAEEALSHGLVDHVVETGAALQAAK 217
>gi|224097120|ref|XP_002334641.1| predicted protein [Populus trichocarpa]
gi|222873863|gb|EEF10994.1| predicted protein [Populus trichocarpa]
Length = 117
Score = 35.4 bits (80), Expect = 5.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 34 DIYSRLLKERIVFVTGQIEDHMATLICA 61
D+ S LL RI ++ I + L+ A
Sbjct: 90 DLPSLLLDARICYLGMPIVPAVTELLVA 117
>gi|307594878|ref|YP_003901195.1| enoyl-CoA hydratase/isomerase [Vulcanisaeta distributa DSM 14429]
gi|307550079|gb|ADN50144.1| Enoyl-CoA hydratase/isomerase [Vulcanisaeta distributa DSM 14429]
Length = 247
Score = 35.4 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 13/23 (56%), Positives = 16/23 (69%)
Query: 184 LDRDHIMSASEACDWGVVDKVLM 206
LDRD +S EA DWG+V KV+
Sbjct: 156 LDRDFRLSTDEAVDWGLVHKVVN 178
>gi|14325158|dbj|BAB60083.1| enoyl-CoA hydratase [Thermoplasma volcanium GSS1]
Length = 249
Score = 35.4 bits (80), Expect = 5.7, Method: Composition-based stats.
Identities = 8/39 (20%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 175 KTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEE 213
K +++ + R +++ EA + G+VD ++ + + E
Sbjct: 153 KNVKKLAINMPR---LTSEEALNLGLVDMIIEDKNKLTE 188
>gi|262039550|ref|ZP_06012849.1| protease IV [Leptotrichia goodfellowii F0264]
gi|261746428|gb|EEY33968.1| protease IV [Leptotrichia goodfellowii F0264]
Length = 549
Score = 35.4 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 36/196 (18%)
Query: 44 IVFVTGQIEDHMATLI-------CAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G IE + + C +L LE K + L INSPGG I+ +
Sbjct: 286 IINLEGIIEPKKSNKVNITYKNVCEKLDKLEDIKNLKGLVLRINSPGGSALESEKIHQKL 345
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEKG----MRFALPNARILLHQPSGGFSGQA---- 148
+ + PI AS G + SAG+K M +L++ +
Sbjct: 346 KKLDVPIYISMGDVCASGGYYIASAGKKIFADSMTLTGSIGVVLMYPELSETLNKIDVNI 405
Query: 149 --------SDIERHAQDI-----VKIKRRLNEIYVKNCG-------KTYEEVEKTLDRDH 188
DI + + KI +NE+Y + + EE+EK
Sbjct: 406 EGFEKGKGFDIFNIFETLSEESKEKIIHTMNEVYSEFKSHVIAAREMSEEELEKIAGGRV 465
Query: 189 IMSASEACDWGVVDKV 204
+ SEA + ++D++
Sbjct: 466 WL-GSEAVNINLIDEI 480
>gi|123968906|ref|YP_001009764.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. AS9601]
gi|123199016|gb|ABM70657.1| signal peptide peptidase SppA (protease IV) [Prochlorococcus
marinus str. AS9601]
Length = 269
Score = 35.4 bits (80), Expect = 5.8, Method: Composition-based stats.
Identities = 40/193 (20%), Positives = 64/193 (33%), Gaps = 34/193 (17%)
Query: 43 RIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPP 102
RIV + I L +E I + I+SPGG V IY ++ +K
Sbjct: 15 RIV-IDEPITSSTRVSFLKALKQVEDREFPALI-VRIDSPGGTVGDSQEIYSAIKRLKDK 72
Query: 103 ISTFCMGQ---AASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGFSGQ 147
+AS G + A +K G+ N LL + F
Sbjct: 73 GCKVIASFGNISASGGVYIGVASDKIVANPGTITGSIGVIIRGNNLSELLDKIGIKFETV 132
Query: 148 A---------SDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDHIMS 191
D + ++ ++E Y + EEV K D I +
Sbjct: 133 KSGVFKDILSPDKPLSEEGRGLLQGLIDESYKQFTEAVAEGRNLPVEEVRKFADG-RIFT 191
Query: 192 ASEACDWGVVDKV 204
++A + G+VDK+
Sbjct: 192 GTQAKELGLVDKI 204
>gi|78189481|ref|YP_379819.1| methylmalonyl-CoA decarboxylase, alpha subunit [Chlorobium
chlorochromatii CaD3]
gi|78171680|gb|ABB28776.1| propionyl-CoA carboxylase carboxyltransferase subunit [Chlorobium
chlorochromatii CaD3]
Length = 513
Score = 35.4 bits (80), Expect = 6.0, Method: Composition-based stats.
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
R+ + EA +G +D ++ R
Sbjct: 461 REKFANPYEAAKYGYIDDIIEPRN 484
>gi|237740732|ref|ZP_04571213.1| protease IV [Fusobacterium sp. 2_1_31]
gi|229422749|gb|EEO37796.1| protease IV [Fusobacterium sp. 2_1_31]
Length = 294
Score = 35.4 bits (80), Expect = 6.2, Method: Composition-based stats.
Identities = 39/197 (19%), Positives = 71/197 (36%), Gaps = 40/197 (20%)
Query: 44 IVFVTGQIE-----DHMATL--ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
++ + G+I+ + + + +L LE K + L INSPGG IY +
Sbjct: 30 VINLEGEIDTRESREAVINYDNVVEKLETLEDIKNLKGLVLRINSPGGSALESEKIYQKL 89
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALP-----------NA 133
+ ++ PI AS G + + G+K G+ P N
Sbjct: 90 KKLEIPIYISMGDFCASGGYYIATVGKKLFATPVTLTGSIGVVILYPEFSETINKLKVNM 149
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDR 186
S + ++ KI +NE+Y + + E++EK
Sbjct: 150 EGFSKGKGFDIFDVFSKLSEESK--EKIVYSMNEVYSEFKAHVMEARNISEEDLEKIAGG 207
Query: 187 DHIMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 208 RVWL-GSQAKENGLVDE 223
>gi|166032602|ref|ZP_02235431.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC
27755]
gi|166026959|gb|EDR45716.1| hypothetical protein DORFOR_02317 [Dorea formicigenerans ATCC
27755]
Length = 325
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 16/138 (11%), Positives = 42/138 (30%), Gaps = 5/138 (3%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + I Y+ ++ + T +G S + + G+R+
Sbjct: 127 ETTGRPIWTYMAHYAASGGYMTSVTGDKIYANKNTVTGSIGVIMSGYDMSGLYEKLGIRY 186
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+ + A + + + + I + ++V+ D
Sbjct: 187 VSITSGVNKDSSKLTDEQVAIYQSQ----VDECYQEFVNIVADGRDMSADQVKALADGRT 242
Query: 189 IMSASEACDWGVVDKVLM 206
+A +A G++D++
Sbjct: 243 Y-TAKQAKANGLIDEIAT 259
>gi|71006056|ref|XP_757694.1| hypothetical protein UM01547.1 [Ustilago maydis 521]
gi|46097369|gb|EAK82602.1| hypothetical protein UM01547.1 [Ustilago maydis 521]
Length = 1128
Score = 35.0 bits (79), Expect = 6.3, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 190 MSASEACDWGVVDKVLMS-RIDIEE 213
MS+ EA +G+VD V+ + R+D +E
Sbjct: 568 MSSHEAKKFGLVDHVMDNERMDAQE 592
>gi|332157800|ref|YP_004423079.1| protease IV [Pyrococcus sp. NA2]
gi|331033263|gb|AEC51075.1| protease IV [Pyrococcus sp. NA2]
Length = 329
Score = 35.0 bits (79), Expect = 6.4, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP-- 101
I+ + G I++ +A I ++ + + + L+I SPGG V IY+ ++ +
Sbjct: 87 ILPIFGPIDEELALKIIKRIREIRSNRTIGGVLLWIESPGGYVGPVREIYEELKKLSHLK 146
Query: 102 PISTFCMGQAASMGSLLLSAGEK 124
PI + G A S + A +K
Sbjct: 147 PIVAYTGGYAYSGAYYIACAAQK 169
>gi|289764414|ref|ZP_06523792.1| protease IV [Fusobacterium sp. D11]
gi|289715969|gb|EFD79981.1| protease IV [Fusobacterium sp. D11]
Length = 306
Score = 35.0 bits (79), Expect = 6.8, Method: Composition-based stats.
Identities = 40/197 (20%), Positives = 70/197 (35%), Gaps = 40/197 (20%)
Query: 44 IVFVTGQIEDHMATL-------ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G+I+ + + +L LE K + L INSPGG IY +
Sbjct: 42 IINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQKL 101
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALP-----------NA 133
+ ++ PI AS G + + G+K G+ P N
Sbjct: 102 KKLEIPIYVSMGDLCASGGYYIATVGKKLFANPVTLTGSIGVVVLYPEFTETINKLKVNM 161
Query: 134 RILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDR 186
S + ++ KI +NE+Y + + E++EK
Sbjct: 162 EGFSKGKGFDIFDVFSKLSEESK--EKIIYSMNEVYSEFKEHVIQARNISEEDLEKIAGG 219
Query: 187 DHIMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 220 RVWL-GSQAKENGLVDE 235
>gi|299535443|ref|ZP_07048765.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis
ZC1]
gi|298729204|gb|EFI69757.1| putative signal peptide peptidase sppA [Lysinibacillus fusiformis
ZC1]
Length = 337
Score = 35.0 bits (79), Expect = 6.9, Method: Composition-based stats.
Identities = 26/157 (16%), Positives = 58/157 (36%), Gaps = 4/157 (2%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
G +++ + I +LL ++ E Q I + ++S ++ F T
Sbjct: 114 GGGVKE--SADIYKKLLKIK-EERQIPIYVSMDSMAASGGYYISAPADKIFAHRDTITGS 170
Query: 108 MGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNE 167
+G + A + G++F + S A + I + +
Sbjct: 171 IGVIMQSINYQELAEKVGVKFETFKSGEHKDMLSPMREVTAEERAMMQDMINETYEEFVD 230
Query: 168 IYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKV 204
I + + EV+K D I+ ++A + G++D++
Sbjct: 231 IVEQGRNMSEAEVKKVADG-RILGGTKALEAGLIDEI 266
>gi|189501774|ref|YP_001957491.1| hypothetical protein Aasi_0328 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497215|gb|ACE05762.1| hypothetical protein Aasi_0328 [Candidatus Amoebophilus asiaticus
5a2]
Length = 261
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Query: 187 DHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
D SASEA + G+V+ V+ + + +KS+
Sbjct: 167 DTF-SASEAKEMGLVNHVVSYKEAVIKKSR 195
>gi|145220053|ref|YP_001130762.1| carboxyl transferase [Prosthecochloris vibrioformis DSM 265]
gi|145206217|gb|ABP37260.1| carboxyl transferase [Chlorobium phaeovibrioides DSM 265]
Length = 513
Score = 35.0 bits (79), Expect = 7.0, Method: Composition-based stats.
Identities = 6/24 (25%), Positives = 12/24 (50%)
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
R+ + EA +G +D ++ R
Sbjct: 461 REKFANPYEAAKYGYIDDIIEPRN 484
>gi|295400922|ref|ZP_06810898.1| Enoyl-CoA hydratase/isomerase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312111232|ref|YP_003989548.1| enoyl-CoA hydratase/isomerase [Geobacillus sp. Y4.1MC1]
gi|294977185|gb|EFG52787.1| Enoyl-CoA hydratase/isomerase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311216333|gb|ADP74937.1| Enoyl-CoA hydratase/isomerase [Geobacillus sp. Y4.1MC1]
Length = 254
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 15/25 (60%)
Query: 190 MSASEACDWGVVDKVLMSRIDIEEK 214
M+A EA + G+VD V+ EEK
Sbjct: 165 MNAEEAYELGIVDIVVDDEAKAEEK 189
>gi|78187290|ref|YP_375333.1| propionyl-CoA carboxylase beta chain [Chlorobium luteolum DSM 273]
gi|78167192|gb|ABB24290.1| propionyl-CoA carboxylase carboxyltransferase subunit [Chlorobium
luteolum DSM 273]
Length = 513
Score = 35.0 bits (79), Expect = 7.2, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 186 RDHIMSASEACDWGVVDKVLMSRI 209
R+ + EA +G +D V+ R
Sbjct: 461 REKFANPYEAAKYGYIDDVIEPRN 484
>gi|226314587|ref|YP_002774483.1| enoyl-CoA hydratase [Brevibacillus brevis NBRC 100599]
gi|226097537|dbj|BAH45979.1| probable enoyl-CoA hydratase [Brevibacillus brevis NBRC 100599]
Length = 257
Score = 35.0 bits (79), Expect = 7.4, Method: Composition-based stats.
Identities = 25/175 (14%), Positives = 54/175 (30%), Gaps = 23/175 (13%)
Query: 44 IVFVTGQ--IEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGM---------AI 92
I+ + + LI + LE + +I + I + A +
Sbjct: 16 IITLNRPKILNALNLQLIDELVDQLEQMDRDPDIRVIILTGNARAFAAGADINEMVEASA 75
Query: 93 YDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIE 152
D M+ + + + + + G + N I++ + +
Sbjct: 76 IDIMKRNQFAVWDRISLISKPIIGAVSGFVLGGGCELMMNCDIVIASETAVIGQPEIKLG 135
Query: 153 RH--AQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVL 205
A ++ R + E T E + SA EA +G+V++V+
Sbjct: 136 VMPGAGGTQRLTRVVGERKALEMLLTGEPI----------SAKEALKYGLVNRVV 180
>gi|331085365|ref|ZP_08334451.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330408148|gb|EGG87638.1| hypothetical protein HMPREF0987_00754 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 329
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 5/136 (3%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + + Y+ ++ + P +T +G S +
Sbjct: 131 EETGRPVWTYMEHYAASGGYYISAPSDKIYANPNTTTGSIGVIMSG----YDMSGLYEKL 186
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+ + I + I + + + R EI T E V + D
Sbjct: 187 GIRSVSITSGKNKDMSKLTEEQIAIYQSSVDESFDRFVEIVADGRKMTEETVREIADGRT 246
Query: 189 IMSASEACDWGVVDKV 204
+A +A G++D++
Sbjct: 247 Y-TAKQAKANGLIDEI 261
>gi|108762546|ref|YP_635601.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK
1622]
gi|108466426|gb|ABF91611.1| signal peptide peptidase SppA, 67K type [Myxococcus xanthus DK
1622]
Length = 680
Score = 35.0 bits (79), Expect = 7.9, Method: Composition-based stats.
Identities = 9/60 (15%), Positives = 20/60 (33%), Gaps = 8/60 (13%)
Query: 150 DIERHAQDIVKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDHIMSASEACDWGVVD 202
D + + ++ L+ IY E+++ + +A G+VD
Sbjct: 523 DADYTPEQQARMDASLDRIYADFTTRAAASRKLPLEKLQSLAKGRVW-TGEDALAHGLVD 581
>gi|296328845|ref|ZP_06871356.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153966|gb|EFG94773.1| S49 family protease IV [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 551
Score = 35.0 bits (79), Expect = 8.1, Method: Composition-based stats.
Identities = 40/195 (20%), Positives = 73/195 (37%), Gaps = 36/195 (18%)
Query: 44 IVFVTGQIEDHMATL-------ICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTM 96
I+ + G+I+ + + +L LE K + L INSPGG IY +
Sbjct: 287 IINLEGEIDTRESKESIINYDNVVEKLDELEDIKNLKGLVLRINSPGGSALESEKIYQKL 346
Query: 97 QFIKPPISTFCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGF 144
+ + PI AS G + + G++ G+ P +++
Sbjct: 347 KKLDIPIYISMGDLCASGGYYIATVGKRLFANPVTLTGSIGVVILYPEFTETINKLKVNM 406
Query: 145 SGQA----SDIERHAQDI-----VKIKRRLNEIYVKNC-------GKTYEEVEKTLDRDH 188
G + DI + + KI +NE+Y + + E++EK
Sbjct: 407 EGFSKGKGFDIFDVSSKLSEESKEKIIYSMNEVYSEFKEHVMEARNISEEDLEKIAGGRV 466
Query: 189 IMSASEACDWGVVDK 203
+ S+A + G+VD+
Sbjct: 467 WL-GSQAKENGLVDE 480
>gi|325660920|ref|ZP_08149547.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472427|gb|EGC75638.1| hypothetical protein HMPREF0490_00279 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 339
Score = 34.6 bits (78), Expect = 8.5, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 41/136 (30%), Gaps = 5/136 (3%)
Query: 69 ENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFCMGQAASMGSLLLSAGEKGMRF 128
E + + Y+ ++ + P +T +G S +
Sbjct: 141 EETGRPVWTYMEHYAASGGYYISAPSDKIYANPNTTTGSIGVIMSG----YDMSGLYEKL 196
Query: 129 ALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDH 188
+ + I + I + + + R EI T E V + D
Sbjct: 197 GIRSVSITSGKNKDMSKLTEEQIAIYQSSVDESFDRFVEIVADGRKMTEETVREIADGRT 256
Query: 189 IMSASEACDWGVVDKV 204
+A +A G++D++
Sbjct: 257 Y-TAKQAKANGLIDEI 271
>gi|266626161|ref|ZP_06119096.1| translocation-enhancing protein TepA [Clostridium hathewayi DSM
13479]
gi|288861931|gb|EFC94229.1| translocation-enhancing protein TepA [Clostridium hathewayi DSM
13479]
Length = 138
Score = 34.6 bits (78), Expect = 8.6, Method: Composition-based stats.
Identities = 17/111 (15%), Positives = 40/111 (36%), Gaps = 10/111 (9%)
Query: 102 PISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKI 161
I T + S + A F +P +++H +G + + I
Sbjct: 11 SIPTVSLVLGGSHSIGVPLAVSTDYSFIVPTGTMMVHPVR--MTGMVIGASQTYEYFEMI 68
Query: 162 KRRLNEIYVKNCGKTYEEVEKTL------DRD--HIMSASEACDWGVVDKV 204
+ R+ + Y+++++ + RD ++ E G++D+V
Sbjct: 69 QDRILSFVSGHATIAYDQLKRLMLNTEMLTRDLGTVLVGEETVKEGLIDEV 119
>gi|188997265|ref|YP_001931516.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp.
YO3AOP1]
gi|188932332|gb|ACD66962.1| protein of unknown function DUF107 [Sulfurihydrogenibium sp.
YO3AOP1]
Length = 429
Score = 34.6 bits (78), Expect = 9.0, Method: Composition-based stats.
Identities = 29/167 (17%), Positives = 62/167 (37%), Gaps = 8/167 (4%)
Query: 48 TGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPISTFC 107
I + +++ E K I L +++PGG+ T+ I T+Q P +
Sbjct: 25 NDPITPTTIDYV-NRIVNTAEEKSAKAIILQLDTPGGLETSIREIIKTIQKTDIPFIVYV 83
Query: 108 M---GQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIVKIKRR 164
+AAS G+++ + + + P I P + + + ++
Sbjct: 84 YPKGARAASAGAIITISAD--VAAMAPATNIGSASPVSMEGKDIEETMK--KKVMNDMVA 139
Query: 165 LNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDI 211
+ K G+ E EK + +++ EA ++D + D+
Sbjct: 140 FVKSIAKEKGRNEEIAEKMITESINLTSEEALKSKIIDIIAEDLNDL 186
>gi|152992629|ref|YP_001358350.1| protease IV [Sulfurovum sp. NBC37-1]
gi|151424490|dbj|BAF71993.1| protease IV [Sulfurovum sp. NBC37-1]
Length = 284
Score = 34.6 bits (78), Expect = 9.7, Method: Composition-based stats.
Identities = 37/197 (18%), Positives = 69/197 (35%), Gaps = 33/197 (16%)
Query: 47 VTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP--PIS 104
+TG I D A + ++ ++ K + +NSPGG V + I ++ +K P+
Sbjct: 47 LTGPIMD--ADKVLKEIDKARKDDDIKGVLFNVNSPGGAVPPSIEICHAIKELKEKKPVI 104
Query: 105 TFCMGQAASMGSLLLSAGEK------------GMRFALPNARILLHQPSGGFSGQASDIE 152
+ G AS K G+ PN L+ + G
Sbjct: 105 AYASGIMASGSYYASIYANKIIANPGSIVGSIGVIMEAPNLHELMEKVGVGTQIVKQGEY 164
Query: 153 RHA------------QDIVKIKRRLNEIY----VKNCGKTYEEVEKTLDRDHIMSASEAC 196
+ A +++ ++ + E++ K G D HI S+ A
Sbjct: 165 KEAGTPTREWTPKEREELERLTKDTYELFVSDVAKARGLDVNNSTAYADA-HIFSSKRAK 223
Query: 197 DWGVVDKVLMSRIDIEE 213
G++D++ R E+
Sbjct: 224 KAGLIDEIATKRSAKEQ 240
>gi|218132681|ref|ZP_03461485.1| hypothetical protein BACPEC_00542 [Bacteroides pectinophilus ATCC
43243]
gi|217992407|gb|EEC58410.1| hypothetical protein BACPEC_00542 [Bacteroides pectinophilus ATCC
43243]
Length = 578
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 40/136 (29%), Gaps = 5/136 (3%)
Query: 40 LKERIVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFI 99
KERI F +G+I D AQ L+L + + + + + G+ ++ ++
Sbjct: 5 FKERIHFYSGRIRDGRLHEFIAQTLWLYSYVTRYKWQIAAYTLIGLTGTATSLISSIISK 64
Query: 100 KPPISTFCMGQAASMGSLLLSAGEKGMRFALPNARILLHQPSGGFSGQASDIERHAQDIV 159
A + + L G L D + A
Sbjct: 65 DMVDIITGHQTGALVKTFCLFIGFSIGNII----VAQLSSYISNMISLRVDTDIKADIFD 120
Query: 160 KIKRRLNEIYVK-NCG 174
K+ E + G
Sbjct: 121 KMLVTDWEELSNYHTG 136
>gi|94502145|ref|ZP_01308645.1| Enoyl-CoA hydratase/isomerase family protein [Oceanobacter sp.
RED65]
gi|94425716|gb|EAT10724.1| Enoyl-CoA hydratase/isomerase family protein [Oceanobacter sp.
RED65]
Length = 264
Score = 34.6 bits (78), Expect = 9.9, Method: Composition-based stats.
Identities = 12/77 (15%), Positives = 33/77 (42%), Gaps = 16/77 (20%)
Query: 151 IERHAQDIVKIKRRLNEIYVKNCGKTYEEVE--------KTLDRDHIMSAS-----EACD 197
A + + L+E+ G + + + + R + ++A +A +
Sbjct: 120 CCDMAIATQRSRFCLSEV---RIGLSPAVISPYVVGAMGERIARRYFLTAEPFIAHKAKE 176
Query: 198 WGVVDKVLMSRIDIEEK 214
+G+V++V+ R ++ E+
Sbjct: 177 FGLVNEVVSDRDELLEQ 193
>gi|154250215|ref|YP_001411040.1| M-related protein [Fervidobacterium nodosum Rt17-B1]
gi|154154151|gb|ABS61383.1| M-related protein [Fervidobacterium nodosum Rt17-B1]
Length = 314
Score = 34.6 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGVVDKVLMSRIDIEEKSK 216
+ +IY + E++++ +R+ +S+ EA VD ++ S IEE K
Sbjct: 77 REYFEKIYENYSAQLEEKIKEIENREKELSSKEAK----VDNLINSIKAIEESWK 127
>gi|71280524|ref|YP_266915.1| alpha/beta fold family hydrolase [Colwellia psychrerythraea 34H]
gi|71146264|gb|AAZ26737.1| hydrolase, alpha/beta fold family [Colwellia psychrerythraea 34H]
Length = 668
Score = 34.6 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 26/159 (16%), Positives = 51/159 (32%), Gaps = 11/159 (6%)
Query: 45 VFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAI-YDTMQFIKPPI 103
V++ G I + + L ++ PQ + + N PG + + ++
Sbjct: 515 VYMNGVIGSDTLKV----MQKLFSDYPQVKTIVMQNVPGSMDDEINLLASTELRNHGINT 570
Query: 104 STFCMGQAASMGSLLLSAGEKGMRFALPNARILL--HQPSGGFSGQASDIERHAQDIVKI 161
G AS G+ + AG K A + D + H + +
Sbjct: 571 HIPADGMVASGGTDMFLAGVKRTVEAGARLGVHSWSDGSGTAALDYPRDHQEHVKYLDYY 630
Query: 162 KRRLNEIYVKNCGKTYEEVEKTLDRDHIMSASEACDWGV 200
+ + I T E + + H M+ E +G+
Sbjct: 631 R--VMGIPADFYWYTLE--AASAENIHWMTTQEITQYGI 665
>gi|46581551|ref|YP_012359.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris
str. Hildenborough]
gi|46450973|gb|AAS97619.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris
str. Hildenborough]
gi|311235195|gb|ADP88049.1| signal peptide peptidase SppA, 36K type [Desulfovibrio vulgaris
RCH1]
Length = 296
Score = 34.6 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 33/191 (17%), Positives = 69/191 (36%), Gaps = 35/191 (18%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKPPI 103
IV + G I D + L + + + + ++SPGG V ++D ++ +
Sbjct: 52 IVRIEGMIGD--VRKTLEWMRKLAEDRTVRGVLVRVDSPGGAVAPSQELHDAVKRLAADK 109
Query: 104 STFCM--------GQAASMGSLLLSA------GEKGMRFALPNARILLHQP--------- 140
G S G+ + A G G++ +PN + L+ +
Sbjct: 110 PVVVSMGSLAASGGLMVSTGATRIVANPATITGSIGVKMEMPNVQGLMDKIGVARQTLVS 169
Query: 141 --------SGGFSGQASDIERHAQDIVKIKRRLNEIYVKNCGKTYEEVEKTLDRDHIMSA 192
+A + I+++ + + ++ E+V D I++
Sbjct: 170 GDLKDAGSPFRAMSEA-ERAYFQSIIMEMYGQFVSMIAEDRNIPVEKVRSFADG-RILTG 227
Query: 193 SEACDWGVVDK 203
S+A + G+VDK
Sbjct: 228 SQALELGLVDK 238
>gi|14591350|ref|NP_143428.1| protease IV [Pyrococcus horikoshii OT3]
gi|3257998|dbj|BAA30681.1| 334aa long hypothetical protease IV [Pyrococcus horikoshii OT3]
Length = 334
Score = 34.6 bits (78), Expect = 10.0, Method: Composition-based stats.
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Query: 44 IVFVTGQIEDHMATLICAQLLFLEAENPQKEISLYINSPGGVVTAGMAIYDTMQFIKP-- 101
I+ + G I+D A + + + + K + ++I SPGG V IY ++ +
Sbjct: 92 ILPIFGPIDDESALNVIEVIRRIRENDTIKGVLVWIESPGGFVGPVREIYIELKKLDYIK 151
Query: 102 PISTFCMGQAASMGSLLLSAGEK 124
P+ + G A S G + A ++
Sbjct: 152 PVIAYVSGYAYSGGYYIACAAKE 174
Database: nr
Posted date: May 13, 2011 4:10 AM
Number of letters in database: 999,999,932
Number of sequences in database: 2,987,209
Database: /data/usr2/db/fasta/nr.01
Posted date: May 13, 2011 4:17 AM
Number of letters in database: 999,998,956
Number of sequences in database: 2,896,973
Database: /data/usr2/db/fasta/nr.02
Posted date: May 13, 2011 4:23 AM
Number of letters in database: 999,999,979
Number of sequences in database: 2,907,862
Database: /data/usr2/db/fasta/nr.03
Posted date: May 13, 2011 4:29 AM
Number of letters in database: 999,999,513
Number of sequences in database: 2,932,190
Database: /data/usr2/db/fasta/nr.04
Posted date: May 13, 2011 4:33 AM
Number of letters in database: 792,586,372
Number of sequences in database: 2,260,650
Lambda K H
0.313 0.138 0.400
Lambda K H
0.267 0.0428 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,911,421,944
Number of Sequences: 13984884
Number of extensions: 92787086
Number of successful extensions: 251129
Number of sequences better than 10.0: 4543
Number of HSP's better than 10.0 without gapping: 4078
Number of HSP's successfully gapped in prelim test: 465
Number of HSP's that attempted gapping in prelim test: 245494
Number of HSP's gapped (non-prelim): 4627
length of query: 216
length of database: 4,792,584,752
effective HSP length: 133
effective length of query: 83
effective length of database: 2,932,595,180
effective search space: 243405399940
effective search space used: 243405399940
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 78 (34.6 bits)