RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01184

>gnl|CDD|130252 TIGR01184, ntrCD, nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase. Length = 230
 Score = 71.3 bits (175), Expect = 5e-13
 Identities = 59/206 (28%), Positives = 89/206 (43%), Gaps = 47/206 (22%)

Query: 22  LDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGFTVGYLPQEPQLD 81
           L  +NL+      I ++G +G GKST+L +++G+ +  +G   L      G    EP  D
Sbjct: 1   LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILE-----GKQITEPGPD 55

Query: 82  LS-----------KTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIAKLQDIIDSKG 130
                         TV+ENI   V          + ++ + S+     I  +++ I   G
Sbjct: 56  RMVVFQNYSLLPWLTVRENIALAV----------DRVLPDLSKSERRAI--VEEHIALVG 103

Query: 131 LWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLLDEPTNHLDAE 190
           L           E+            LSGG K+RVA+ + L   P +LLLDEP   LDA 
Sbjct: 104 L----------TEAADKR-----PGQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDAL 148

Query: 191 TIAWMEKYL----REYSGAVLMVTHD 212
           T   +++ L     E+   VLMVTHD
Sbjct: 149 TRGNLQEELMQIWEEHRVTVLMVTHD 174