>gnl|CDD|130261 TIGR01193, bacteriocin_ABC, ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc. Length = 708

Score = 58.2 bits (141), Expect = 5e-09 Identities = 48/229 (20%), Positives = 96/229 (41%), Gaps = 45/229 (19%) Query: 318 IEAKGISKSYN-DRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIHV 376 I +S SY ++ ++S + ++G +G+GK+TL ++L G SG I + Sbjct: 474 IVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILL 533 Query: 377 GETVC-----------LSYVDQ----------------SRDSLEAEKTVWEDISGG---D 406 ++Y+ Q +++++ ++ +W D Sbjct: 534 NGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDE-IWAACEIAEIKD 592 Query: 407 DIVKLNGHEINSRAYCSAFNFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPT 466 DI + Y + + +G S+SGGQ+ R+ LA+ L + V++LDE T Sbjct: 593 DIENM------PLGYQTELSEEGS-------SISGGQKQRIALARALLTDSKVLILDEST 639 Query: 467 NDLDTETLSALEDALENFAGCAVIISHDRMFLDRLATHILAFEGNGHVE 515 ++LDT T + + L N +I R+ + + + I+ + +E Sbjct: 640 SNLDTITEKKIVNNLLNLQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIE 688

RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01193