RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01257

>gnl|CDD|130324 TIGR01257, rim_protein, retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease. Length = 2272
 Score = 49.2 bits (117), Expect = 3e-06
 Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 35/210 (16%)

Query: 12   LSKVF--GSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGF 69
            L K+F    +  +D +N++FY +     LG NGAGK+T L I+ G+    +G        
Sbjct: 934  LVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTV------ 987

Query: 70   TVGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRY---NELMMNYSE---KTEEEIAKLQ 123
             VG    E  LD    V++++  G+  +  IL  +    E ++ Y++   ++ EE     
Sbjct: 988  LVGGKDIETNLD---AVRQSL--GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEA---- 1038

Query: 124  DIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLLDEP 183
                      LE E  +    LH   +      LSGG +R++++    +    +++LDEP
Sbjct: 1039 ---------QLEMEAMLEDTGLHHKRNE-EAQDLSGGMQRKLSVAIAFVGDAKVVVLDEP 1088

Query: 184  TNHLDAETIAWMEKYLREY-SG-AVLMVTH 211
            T+ +D  +   +   L +Y SG  ++M TH
Sbjct: 1089 TSGVDPYSRRSIWDLLLKYRSGRTIIMSTH 1118