RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01189

>gnl|CDD|162243 TIGR01189, ccmA, heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. Length = 198

 Score = 87.4 bits (217), Expect = 9e-18
 Identities = 56/202 (27%), Positives = 79/202 (39%), Gaps = 43/202 (21%)

Query: 318 IEAKGISKSYNDRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIHVG 377
           + A+ ++ S  +R+L + LSF L  G  + V GPNG GKTTL R+L G   PDSG +   
Sbjct: 1   LAARNLACSRGERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWN 60

Query: 378 ET----VCLSYVDQS-----RDSLEAEKTVWE------DISGGDDI--------VKLNGH 414
            T                     L+ E +  E       I GG           V L G 
Sbjct: 61  GTALAEQRDEPHRNILYLGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGF 120

Query: 415 EINSRAYCSAFNFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTNDLDTETL 474
           E                       LS GQ+ R+ LA++  S   + +LDEPT  LD   +
Sbjct: 121 E-----------------DLPAAQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGV 163

Query: 475 SALEDALENFA---GCAVIISH 493
           + L   L       G  ++ +H
Sbjct: 164 ALLAGLLRAHLARGGIVLLTTH 185