RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01189
>gnl|CDD|162243 TIGR01189, ccmA, heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c. Length = 198
Score = 73.9 bits (182), Expect = 1e-13
Identities = 60/202 (29%), Positives = 84/202 (41%), Gaps = 48/202 (23%)
Query: 25 INLSFYPDA--KIGILGPNGAGKSTILRIMAGIDKEYNGE-AWLATGFTVG--------- 72
LSF +A + + GPNG GK+T+LRI+AG+ + +GE W T
Sbjct: 17 EGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQRDEPHRNIL 76
Query: 73 YLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIAKLQDIIDSKGLW 132
YL P L + EN L + + E+ +A + GL
Sbjct: 77 YLGHLPGLKPELSALEN-----------LHFWAAIHGGAQRTIEDALAAV-------GLT 118
Query: 133 DLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLLDEPTNHLDAETI 192
E PA LS G++RR+AL +L LS L +LDEPT LD +
Sbjct: 119 GFE----------DLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGV 163
Query: 193 AWMEKYLREY---SGAVLMVTH 211
A + LR + G VL+ TH
Sbjct: 164 ALLAGLLRAHLARGGIVLLTTH 185