RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR01978
>gnl|CDD|162636 TIGR01978, sufC, FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA. Length = 243
Score = 64.6 bits (158), Expect = 6e-11
Identities = 61/247 (24%), Positives = 105/247 (42%), Gaps = 39/247 (15%)
Query: 19 KKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEY---NGEAWLATGFTVGYLP 75
K++L +NL+ I+GPNG+GKST+ + +AG Y +G + P
Sbjct: 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAG-HPSYEVTSGTILFKGQDLLELEP 71
Query: 76 QEPQ---LDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIAKLQDIIDSKGLW 132
E L L+ E I GV++ + + N S + EE + L
Sbjct: 72 DERARAGLFLAFQYPEEI-PGVSNLEFLRSALNARR---SARGEEPLD----------LL 117
Query: 133 DLETEVQVAIESLHCPAD----GLNITSLSGGEKRRVALCKLLLSSPDLLLLDEPTNHLD 188
D ++ + L + +N SGGEK+R + ++ L P L +LDE + LD
Sbjct: 118 DFLKLLKAKLALLGMDEEFLNRSVN-EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLD 176
Query: 189 -------AETIAWMEKYLREYSGAVLMVTHDRYFLDNVT-NWILEVDRGKGIPYQGNYSA 240
AE I LRE + L++TH + L+ + +++ + G+ I G+
Sbjct: 177 IDALKIVAEGI----NRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGR-IVKSGDVEL 231
Query: 241 YLQMKAK 247
+++ K
Sbjct: 232 AKELEEK 238