RPSBLAST alignment for GI: 254780273 and conserved domain: TIGR03411
>gnl|CDD|163251 TIGR03411, urea_trans_UrtD, urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity. Length = 242
Score = 63.7 bits (156), Expect = 1e-10
Identities = 66/235 (28%), Positives = 108/235 (45%), Gaps = 41/235 (17%)
Query: 5 FIYHMAGLSKVFGSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAW 64
I ++ GLS F K L+D++L P I+GPNGAGK+T++ ++ G + G
Sbjct: 1 PILYLEGLSVSFDGFKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVL 60
Query: 65 LA----TGFT--------VGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYS 112
TG +G Q+P + + TV EN+ + +++ +
Sbjct: 61 FGGTDLTGLPEHQIARAGIGRKFQKPTVFENLTVFENLELALPRDKSVF----ASLF--F 114
Query: 113 EKTEEEIAKLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLL 172
+ EE ++++++++ GL D A GL LS G+K+ + + LL+
Sbjct: 115 RLSAEEKDRIEEVLETIGLADE----------ADRLA-GL----LSHGQKQWLEIGMLLM 159
Query: 173 SSPDLLLLDEPTNHL-DAETIAWMEKYLREYSG--AVLMVTHD----RYFLDNVT 220
P LLLLDEP + D ET E L+ +G +V++V HD R D VT
Sbjct: 160 QDPKLLLLDEPVAGMTDEETEKTAE-LLKSLAGKHSVVVVEHDMEFVRSIADKVT 213