RPSBLAST alignment for GI: 254780273 and conserved domain: cd03218
>gnl|CDD|72977 cd03218, ABC_YhbG, The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.. Length = 232
Score = 103 bits (258), Expect = 2e-22
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 65/272 (23%)
Query: 11 GLSKVFGSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGFT 70
LSK +G +KV++ ++LS +G+LGPNGAGK+T ++ G+ K +G+ L
Sbjct: 5 NLSKRYGKRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDI 64
Query: 71 ------------VGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEE 118
+GYLPQE + TV+ENI+ A+L+ EK EE
Sbjct: 65 TKLPMHKRARLGIGYLPQEASIFRKLTVEENIL-------AVLEIRGLSKKEREEKLEEL 117
Query: 119 IA--KLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPD 176
+ + + SK SLSGGE+RRV + + L ++P
Sbjct: 118 LEEFHITHLRKSKAS------------------------SLSGGERRRVEIARALATNPK 153
Query: 177 LLLLDEPTNHLDAETIAWME---KYLREYSGAVLMVTHDRYFLDNVTNWILEVDRGKGIP 233
LLLDEP +D + ++ K L++ VL+ H NV + DR
Sbjct: 154 FLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDH------NVRETLSITDR----- 202
Query: 234 YQGNYSAYLQMKAKRMAQENREEISRQKAIER 265
AY+ + K +A+ EEI+ + + +
Sbjct: 203 ------AYIIYEGKVLAEGTPEEIAANELVRK 228