RPSBLAST alignment for GI: 254780273 and conserved domain: cd03220
>gnl|CDD|72979 cd03220, ABC_KpsT_Wzt, ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.. Length = 224
Score = 81.0 bits (200), Expect = 8e-16
Identities = 52/216 (24%), Positives = 86/216 (39%), Gaps = 7/216 (3%)
Query: 307 IPVGKRLGHVVIEAKGISKSYNDRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGD 366
G + G + + ++SF++P G +G+IG NGAGK+TL R+L G
Sbjct: 12 TYKGGSSSLKKLGILGRKGEVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGI 71
Query: 367 ESPDSGTIHVGETVCLSYVDQSRDSLEAEKTVWEDISGGDDIVKLNGHEINSR-AYCSAF 425
PDSGT+ V V E T E+I ++ L+ EI+ + F
Sbjct: 72 YPPDSGTVTVRGRVSSLLGLGG--GFNPELTGRENIYLNGRLLGLSRKEIDEKIDEIIEF 129
Query: 426 NFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTNDLDTETLSALEDALENF- 484
+ G + + S G + R+ A +++L+DE D + L
Sbjct: 130 SELGDFIDLPVKTYSSGMKARLAFAIATALEPDILLIDEVLAVGDAAFQEKCQRRLRELL 189
Query: 485 --AGCAVIISHDRMFLDRLATHILAFEGNGHVEWFE 518
+++SHD + RL L E G + +
Sbjct: 190 KQGKTVILVSHDPSSIKRLCDRALVLE-KGKIRFDG 224