RPSBLAST alignment for GI: 254780273 and conserved domain: cd03233
>gnl|CDD|72992 cd03233, ABC_PDR_domain1, The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 202
Score = 67.1 bits (164), Expect = 1e-11
Identities = 39/164 (23%), Positives = 64/164 (39%), Gaps = 36/164 (21%)
Query: 323 ISKSYNDRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPD---SGTIHVG-- 377
K + ++ + S + PG +V V+G G+G +TL + L + G IH
Sbjct: 13 TGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGI 72
Query: 378 -----ETVC---LSYVDQSRDSLEAEKTVWEDISGGDDIVKLNGHEINSRAYCSAFNFKG 429
+ YV + D TV E + D ++ G+E
Sbjct: 73 PYKEFAEKYPGEIIYVSEE-DVHFPTLTVRETL---DFALRCKGNEF------------- 115
Query: 430 GDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTNDLDTET 473
+ +SGG+R RV +A+ L S +V+ D T LD+ T
Sbjct: 116 ------VRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSST 153