RPSBLAST alignment for GI: 254780273 and conserved domain: cd03240

>gnl|CDD|72999 cd03240, ABC_Rad50, The catalytic domains of Rad50 are similar to the ATP-binding cassette of ABC transporters, but are not associated with membrane-spanning domains. The conserved ATP-binding motifs common to Rad50 and the ABC transporter family include the Walker A and Walker B motifs, the Q loop, a histidine residue in the switch region, a D-loop, and a conserved LSGG sequence. This conserved sequence, LSGG, is the most specific and characteristic motif of this family and is thus known as the ABC signature sequence.. Length = 204
 Score = 64.1 bits (156), Expect = 1e-10
 Identities = 50/215 (23%), Positives = 90/215 (41%), Gaps = 37/215 (17%)

Query: 318 IEAKGISKSYNDRLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFR----MLTGDESPDSGT 373
           +  + I +S+++R  I+  S       +  ++G NGAGKTT+       LTG+  P+S  
Sbjct: 4   LSIRNI-RSFHERSEIEFFS------PLTLIVGQNGAGKTTIIEALKYALTGELPPNSKG 56

Query: 374 IHVGETVCLSYVDQSRDSLEAEKTVWEDISGGDDIVKLNGHEINSRAYCSAFNFKGGDQQ 433
                 +      +  +     K  +E+ +G    +  +   + +  +C       G+  
Sbjct: 57  GAHDPKLI-----REGEVRAQVKLAFENANGKKYTITRSLAILENVIFC-----HQGESN 106

Query: 434 ----QRIGSLSGGQRG------RVHLAKILKSGGNVILLDEPTNDLDTETLS-ALEDALE 482
                  G  SGG++       R+ LA+   S   ++ LDEPT +LD E +  +L + +E
Sbjct: 107 WPLLDMRGRCSGGEKVLASLIIRLALAETFGSNCGILALDEPTTNLDEENIEESLAEIIE 166

Query: 483 NFAGCAV----IISHDRMFLDRLATHILAFEGNGH 513
                      +I+HD   +D  A HI   E +G 
Sbjct: 167 ERKSQKNFQLIVITHDEELVDA-ADHIYRVEKDGR 200