RPSBLAST alignment for GI: 254780273 and conserved domain: cd03245
>gnl|CDD|73004 cd03245, ABCC_bacteriocin_exporters, ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.. Length = 220
Score = 86.0 bits (213), Expect = 2e-17
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 44/224 (19%)
Query: 318 IEAKGISKSYND--RLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIH 375
IE + +S SY + +DN+S + G V +IG G+GK+TL ++L G P SG++
Sbjct: 3 IEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVL 62
Query: 376 VGETVC-----------LSYVDQS--------RDSLEAEKTVWED--------ISGGDDI 408
+ T + YV Q RD++ + +D ++G D
Sbjct: 63 LDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDF 122
Query: 409 VKLNGHEINSRAYCSAFNFKGGDQQQRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTND 468
V + + + + G++ + LSGGQR V LA+ L + ++LLDEPT+
Sbjct: 123 VNKHPN---------GLDLQIGERGR---GLSGGQRQAVALARALLNDPPILLLDEPTSA 170
Query: 469 LDTETLSALEDALENFAG--CAVIISHDRMFLDRLATHILAFEG 510
+D + L++ L G +II+H R L L I+ +
Sbjct: 171 MDMNSEERLKERLRQLLGDKTLIIITH-RPSLLDLVDRIIVMDS 213