RPSBLAST alignment for GI: 254780273 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score = 75.6 bits (186), Expect = 3e-14
 Identities = 67/228 (29%), Positives = 103/228 (45%), Gaps = 28/228 (12%)

Query: 318 IEAKGISKSYND--RLLIDNLSFKLPPGGIVGVIGPNGAGKTTLFRMLTGDESPDSGTIH 375
           +E K ++  Y      ++ ++S  +P G  V ++GP+G+GK+TL  ++      DSG I 
Sbjct: 1   VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRIL 60

Query: 376 V-GETVC----------LSYVDQSRDSLEAEKTVWEDISGGDDIVKLNGHEINSRAYCSA 424
           + G  V           +  V Q  D      TV E+I+ G         E  +RA   A
Sbjct: 61  IDGHDVRDYTLASLRRQIGLVSQ--DVFLFNDTVAENIAYGRPGATREEVEEAARAAN-A 117

Query: 425 FNF-----KGGDQQ--QRIGSLSGGQRGRVHLAKILKSGGNVILLDEPTNDLDTETLSAL 477
             F     +G D    +R   LSGGQR R+ +A+ L     +++LDE T+ LDTE+   +
Sbjct: 118 HEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTESERLV 177

Query: 478 EDALENFAG--CAVIISHDRMFLDRLATHILAFEGNGHVEWFEGNFEE 523
           + ALE         +I+H R+     A  I+  E    VE   G  EE
Sbjct: 178 QAALERLMKNRTTFVIAH-RLSTIENADRIVVLEDGKIVE--RGTHEE 222