RPSBLAST alignment for GI: 254780273 and conserved domain: cd03251

>gnl|CDD|73010 cd03251, ABCC_MsbA, MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 234
 Score = 60.6 bits (147), Expect = 1e-09
 Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 52/192 (27%)

Query: 19  KKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMA-------------GIDKEYNGEAWL 65
             VL DI+L       + ++GP+G+GKST++ ++              G D      A L
Sbjct: 15  PPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASL 74

Query: 66  ATGFTVGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEI------ 119
                +G + Q+  L  + TV ENI  G                     T EE+      
Sbjct: 75  RR--QIGLVSQDVFL-FNDTVAENIAYGR-----------------PGATREEVEEAARA 114

Query: 120 AKLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLL 179
           A   + I        +T +            G     LSGG+++R+A+ + LL  P +L+
Sbjct: 115 ANAHEFIMELPE-GYDTVI------------GERGVKLSGGQRQRIAIARALLKDPPILI 161

Query: 180 LDEPTNHLDAET 191
           LDE T+ LD E+
Sbjct: 162 LDEATSALDTES 173