RPSBLAST alignment for GI: 254780273 and conserved domain: cd03293

>gnl|CDD|73052 cd03293, ABC_NrtD_SsuB_transporters, NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 220
 Score =  112 bits (282), Expect = 2e-25
 Identities = 66/216 (30%), Positives = 101/216 (46%), Gaps = 43/216 (19%)

Query: 11  GLSKVFGSK----KVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDK------EYN 60
            +SK +G        L+DI+LS      + ++GP+G GKST+LRI+AG+++        +
Sbjct: 5   NVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVD 64

Query: 61  GEAWLATGFTVGYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYSEKTEEEIA 120
           GE     G   GY+ Q+  L    TV +N+  G+  +                   E   
Sbjct: 65  GEPVTGPGPDRGYVFQQDALLPWLTVLDNVALGLELQGV--------------PKAEARE 110

Query: 121 KLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLLLL 180
           + +++++  GL   E            P        LSGG ++RVAL + L   PD+LLL
Sbjct: 111 RAEELLELVGLSGFEN---------AYPHQ------LSGGMRQRVALARALAVDPDVLLL 155

Query: 181 DEPTNHLDAETIAWMEKYL----REYSGAVLMVTHD 212
           DEP + LDA T   +++ L    RE    VL+VTHD
Sbjct: 156 DEPFSALDALTREQLQEELLDIWRETGKTVLLVTHD 191