RPSBLAST alignment for GI: 254780273 and conserved domain: cd03294

>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
 Score = 47.9 bits (114), Expect = 7e-06
 Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 44/218 (20%)

Query: 12  LSKVFGSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGFTV 71
           + K  G    ++D++L         I+G +G+GKST+LR +  + +  +G+  +      
Sbjct: 30  ILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQ--- 86

Query: 72  GYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYS-------------EKTEEE 118
                    D++   ++ + E    K +++ +   L+ + +                 E 
Sbjct: 87  ---------DIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAER 137

Query: 119 IAKLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLL 178
             +  + ++  GL   E +                   LSGG ++RV L + L   PD+L
Sbjct: 138 EERAAEALELVGLEGWEHKY---------------PDELSGGMQQRVGLARALAVDPDIL 182

Query: 179 LLDEPTNHLDAETIAWMEKYL----REYSGAVLMVTHD 212
           L+DE  + LD      M+  L     E    ++ +THD
Sbjct: 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHD 220