RPSBLAST alignment for GI: 254780273 and conserved domain: cd03294
>gnl|CDD|73053 cd03294, ABC_Pro_Gly_Bertaine, This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.. Length = 269
Score = 47.9 bits (114), Expect = 7e-06
Identities = 44/218 (20%), Positives = 86/218 (39%), Gaps = 44/218 (20%)
Query: 12 LSKVFGSKKVLDDINLSFYPDAKIGILGPNGAGKSTILRIMAGIDKEYNGEAWLATGFTV 71
+ K G ++D++L I+G +G+GKST+LR + + + +G+ +
Sbjct: 30 ILKKTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQ--- 86
Query: 72 GYLPQEPQLDLSKTVKENIIEGVAHKQAILDRYNELMMNYS-------------EKTEEE 118
D++ ++ + E K +++ + L+ + + E
Sbjct: 87 ---------DIAAMSRKELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPRAER 137
Query: 119 IAKLQDIIDSKGLWDLETEVQVAIESLHCPADGLNITSLSGGEKRRVALCKLLLSSPDLL 178
+ + ++ GL E + LSGG ++RV L + L PD+L
Sbjct: 138 EERAAEALELVGLEGWEHKY---------------PDELSGGMQQRVGLARALAVDPDIL 182
Query: 179 LLDEPTNHLDAETIAWMEKYL----REYSGAVLMVTHD 212
L+DE + LD M+ L E ++ +THD
Sbjct: 183 LMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHD 220