HHsearch alignment for GI: 254780274 and conserved domain: COG3243
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism].
Probab=99.11 E-value=1.2e-08 Score=76.32 Aligned_cols=268 Identities=12% Similarity=0.131 Sum_probs=140.7
Q ss_pred EECCCCC-CCEEEEEECCCCCCHHHH-----HHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 7348899-967999988687898889-----9999999986989999586020885536787666556399999999999
Q gi|254780274|r 20 YNQTHKT-PRAIILACQSIEENIEDY-----NDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKL 93 (317)
Q Consensus 20 ~~~~~~~-p~~~vl~~HG~~~~~~~~-----~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~ 93 (317)
T Consensus 98 y~P~te~v~~~PlLiVpP~iNk~yI~DL~~~~s~V~~l~~~g~~vfvIsw~nPd~~~-------~~~~~edYi~e~l~~a 170 (445)
T COG3243 98 YKPLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASL-------AAKNLEDYILEGLSEA 170 (445)
T ss_pred CCCCCCCCCCCCEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCEEEEECCCCHHHH-------HHCCHHHHHHHHHHHH
T ss_conf 077877567884486344337524786787740899999759836899615860765-------5346999999999999
Q ss_pred HHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCHH-HHEHEECCCCCCCCCCCHH-HH--H-HHHHHH-HHHCCCCCHHH
Q ss_conf 99999855995599993387228999999968323-2132022777775441015-66--8-887777-53056321023
Q gi|254780274|r 94 RTLISEKHGNTSVLLFGYSLGTIIALSTLLKYPQK-FSGIALWNLDLCFEKYSCM-LM--T-LLLKIE-KFFKGSDTPSR 167 (317)
Q Consensus 94 ~~~~~~~~~~~~v~lvGhS~GG~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~~~-~~--~-~~~~~~-~~~~~~~~~~~ 167 (317)
T Consensus 171 id~V~~itg~~dInliGyC~GGt~~~~a~a~~~~~~I~S~T~~ts~~Df~~~g~l~~f~~~~~~~~~~~~~~~~g~ipg~ 250 (445)
T COG3243 171 IDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGW 250 (445)
T ss_pred HHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCH
T ss_conf 99999874765123554614569999999974431224467773201003575100126878999998642221678808
Q ss_pred HHHHHHHHH------HCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH---------HHHHCCC
Q ss_conf 433311111------0011100123344574468888764211578978999999999850002---------3331035
Q gi|254780274|r 168 LMRHLTTDL------WNRNNQNWKNFLKDHSVKKNSQNYILDSNHIPISVWLEFMSMATDISSR---------GSFNPLS 232 (317)
Q Consensus 168 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ 232 (317)
T Consensus 251 ~ma~~F~mLrp~dliw~~fV~nyl~ge--~pl~fdllyWn~Dst~~~~~~~~~~Lrn~y~~N~L~~g~~~v~G~~VdL~~ 328 (445)
T COG3243 251 YMAIVFFLLRPNDLIWNYFVNNYLDGE--QPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGD 328 (445)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHCCC--CCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHCCCEEECCEEECHHH
T ss_conf 999999863931101688898861788--887236788607786576689999999999737443065488888942232
Q ss_pred CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC-CCCCCCHH--HHHH----HHHHHHHHC
Q ss_conf 68847999726888746757999999999985789982899825983165-65698989--9999----999999832
Q gi|254780274|r 233 RFIPFCLIGGGNVSSKIEDLTQTYKLTTRLQNEEFYDISLMSLPPTMHSN-DPHNVFPP--PAIK----KLRNWIVNS 303 (317)
Q Consensus 233 ~~~Pvlli~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~pg~~H~~-~l~e~~~~--~~~~----~i~~Wl~~~ 303 (317)
T Consensus 329 It~pvy~~a~~~DhIaP~--~Sv~~g~~---l~~g-~~~f~l~-~sGHIa~vVN~p~~~k~~~w~n~~~~~~~Wl~~a 399 (445)
T COG3243 329 ITCPVYNLAAEEDHIAPW--SSVYLGAR---LLGG-EVTFVLS-RSGHIAGVVNPPGNAKYQYWTNLPADAEAWLSGA 399 (445)
T ss_pred CCCCEEEEECCCCCCCCH--HHHHHHHH---HCCC-CEEEEEE-CCCEEEEEECCCCHHHHHCCCCCCCCHHHHHHHC
T ss_conf 664238863034655668--98988987---5499-6499983-6860788857823566634689832099999861