HHsearch alignment for GI: 254780274 and conserved domain: COG3946

Probab=97.83  E-value=0.00035  Score=46.79  Aligned_cols=87  Identities=18%  Similarity=0.232  Sum_probs=64.8

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             99998868789888999999999869899995860208855367876665563999999999999999985599559999
Q gi|254780274|r   30 IILACQSIEENIEDYNDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKLRTLISEKHGNTSVLLF  109 (317)
Q Consensus        30 ~vl~~HG~~~~~~~~~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~v~lv  109 (317)
T Consensus       262 ~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsL----------RYfW~~rtPe~~a~Dl~r~i~~y~~~w~~~~~~li  331 (456)
T COG3946         262 VAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSL----------RYFWSERTPEQIAADLSRLIRFYARRWGAKRVLLI  331 (456)
T ss_pred             EEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEHH----------HHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_conf             99998368736564499999999779955643002----------35515689788877799999999886376438999


Q ss_pred             ECCCCHHHHHHHHHHCC
Q ss_conf             33872289999999683
Q gi|254780274|r  110 GYSLGTIIALSTLLKYP  126 (317)
Q Consensus       110 GhS~GG~ia~~~a~~~p  126 (317)
T Consensus       332 GySfGADvlP~~~n~L~  348 (456)
T COG3946         332 GYSFGADVLPFAYNRLP  348 (456)
T ss_pred             EECCCCHHHHHHHHHCC
T ss_conf             60466404689987588