HHsearch alignment for GI: 254780274 and conserved domain: PRK06489
>PRK06489 hypothetical protein; Provisional.
Probab=99.56 E-value=1.4e-12 Score=102.68 Aligned_cols=288 Identities=11% Similarity=0.072 Sum_probs=139.0
Q ss_pred CEEEEEECCCEEEEEEEEECCCCCC--------CEEEEEECCCCCCHH------HHHHHHHH---HHHCCCEEEEECCHH
Q ss_conf 2499950893789999973488999--------679999886878988------89999999---998698999958602
Q gi|254780274|r 3 QKTFLTEDETIHKSVHSYNQTHKTP--------RAIILACQSIEENIE------DYNDFREY---FAEENVAVYIYSYRN 65 (317)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~vl~~HG~~~~~~------~~~~~~~~---l~~~G~~V~a~D~rG 65 (317)
T Consensus 36 ~~~F~f~sG~~L~~~~l~Y~T~G~~~~~~~~~~~NaVLv~H~~~g~~~~~~~~g~w~~liGpG~~lDt~kyfiI~~n~lG 115 (358)
T PRK06489 36 ARDFKFHSGETLPELKLHYTTLGTPTRGADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDATKYYIILPDGIG 115 (358)
T ss_pred ECCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCEEEEEECCCC
T ss_conf 04257468878778469999667656565667776599982577874436898608864579988788866999835888
Q ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHHHHHHCCCCEEE-EEECCCCHHHHHHHHHHCCHHHHEHEECCCC-CCCC
Q ss_conf 0885536787666556399999999999-99999855995599-9933872289999999683232132022777-7754
Q gi|254780274|r 66 TIKTTSDYLRDYPKNTSDTTIVCDVMKL-RTLISEKHGNTSVL-LFGYSLGTIIALSTLLKYPQKFSGIALWNLD-LCFE 142 (317)
Q Consensus 66 ~G~s~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~v~-lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~-~~~~ 142 (317)
T Consensus 116 ~g~Ss~Ps~~~~~~FP--~~ti~D~V~aQ~~Ll~e~lgI~~l~~v~G~SmGgmqa~~Wa~~yPd~v~~~ipia~~p~~~s 193 (358)
T PRK06489 116 HGKSSKPSDGLRAKFP--RYDYADMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWVWGERYPDFMDALMPMASQPVEMS 193 (358)
T ss_pred CCCCCCCCCCCCCCCC--EEEHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC
T ss_conf 9999999988888998--32225789999999987629866865632578889999999879689874563105744220
Q ss_pred CCCHHHHHHHH---HHHHHHCCCCC---HHHHHHHH-HHHHHCCCCC--CCCCCCCCCCCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 41015668887---77753056321---02343331-1111001110--0123344574468888764211578978999
Q gi|254780274|r 143 KYSCMLMTLLL---KIEKFFKGSDT---PSRLMRHL-TTDLWNRNNQ--NWKNFLKDHSVKKNSQNYILDSNHIPISVWL 213 (317)
Q Consensus 143 ~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (317)
T Consensus 194 ~~N~~~~e~~~~aI~~DP~w~~G~Y~~qP~~gl~aa~m~~~~t~~s~~~~q~~~ptr~~~d~~vd~~~~~~~~~DANd~L 273 (358)
T PRK06489 194 GRNWMWRRMLIDAIRNDPDWNGGNYTTQPRAMKRANTAFGIATGGGTLAYQKQAPTRAAADKAVDERLAAPVTADANDFL 273 (358)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHH
T ss_conf 87799999999998619554588577682669999999999981489999875871667789999987433367811699
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECC----CCCCCCCCCCCH
Q ss_conf 9999998500023331035688479997268887467579999999999857899828998259----831656569898
Q gi|254780274|r 214 EFMSMATDISSRGSFNPLSRFIPFCLIGGGNVSSKIEDLTQTYKLTTRLQNEEFYDISLMSLPP----TMHSNDPHNVFP 289 (317)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~Pvlli~G~~D~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~pg----~~H~~~l~e~~~ 289 (317)
T Consensus 274 y~~kAs~~yDp~~~L~--~IkA~vLvI~~a~D~~fPPE~g~~e~~~~~-----v~~~~~~~ip~~~~t~GH~t~~~---~ 343 (358)
T PRK06489 274 YQWDSSRDYNPSPDLE--KIKAPVLAVNSADDERNPPELGVMEAALKR-----VKNGRLVLIPASDETRGHGTTGN---A 343 (358)
T ss_pred HHHHHHCCCCCHHHHH--HCCCCEEEEECCCCCCCCHHHHHHHHHHHH-----CCCCEEEEECCCCCCCCCCCCCC---H
T ss_conf 9987527479635586--473358998565546288203058999974-----76964999557767467766657---6
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999983
Q gi|254780274|r 290 PPAIKKLRNWIVN 302 (317)
Q Consensus 290 ~~~~~~i~~Wl~~ 302 (317)
T Consensus 344 ~~~~~~L~~~L~~ 356 (358)
T PRK06489 344 KFWKAYLAELLAQ 356 (358)
T ss_pred HHHHHHHHHHHHC
T ss_conf 7899999999841