HHsearch alignment for GI: 254780274 and conserved domain: pfam07082
>pfam07082 DUF1350 Protein of unknown function (DUF1350). This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=98.57 E-value=1.4e-05 Score=56.00 Aligned_cols=108 Identities=14% Similarity=0.108 Sum_probs=69.7
Q ss_pred EEECCCCCCCEEEEEECCCC---CCHHHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 97348899967999988687---898889999999998698999958602088553678766655639999999999999
Q gi|254780274|r 19 SYNQTHKTPRAIILACQSIE---ENIEDYNDFREYFAEENVAVYIYSYRNTIKTTSDYLRDYPKNTSDTTIVCDVMKLRT 95 (317)
Q Consensus 19 ~~~~~~~~p~~~vl~~HG~~---~~~~~~~~~~~~l~~~G~~V~a~D~rG~G~s~~~~~~~~~~~~~~~~~~~d~~~~~~ 95 (317)
T Consensus 8 ~wvl~P~~P~~vIhFiGGaf~ga~P~vtYr~lLe~L~~~g~~ViAtpy~~-~---------fDH~~iA~~v~~~F~~~~~ 77 (250)
T pfam07082 8 NWVLVPQRPLGWIHFLGGAFVATAPQLTYRWLLEHLGEAGYVVIATPFVN-T---------FDHGAIALSVLNKFEYALE 77 (250)
T ss_pred EEEEECCCCCEEEEEECCHHHCCCCHHHHHHHHHHHHHCCCEEEEECCCC-C---------CCHHHHHHHHHHHHHHHHH
T ss_conf 07973799868999707665426828899999999987896899923678-9---------8779999999999999999
Q ss_pred HHHHHCC----CCEEEEEECCCCHHHHHHHHHHCCHHHHEHEECC
Q ss_conf 9998559----9559999338722899999996832321320227
Q gi|254780274|r 96 LISEKHG----NTSVLLFGYSLGTIIALSTLLKYPQKFSGIALWN 136 (317)
Q Consensus 96 ~~~~~~~----~~~v~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~ 136 (317)
T Consensus 78 ~L~~~~g~~~~~LPv~gvGHSlGckLhLLi~s~~~~~R~gniliS 122 (250)
T pfam07082 78 RLVHRGGYPPAYLPIYGLGHSMGCKLHLLIGSLYDVERAGNILMA 122 (250)
T ss_pred HHHHHCCCCCCCCCEECCCCCCCCHHHEEECCCCCCCCCCCEEEE
T ss_conf 999734998444752313433231654132234678755313543