HHsearch alignment for GI: 254780274 and conserved domain: pfam11288
>pfam11288 DUF3089 Protein of unknown function (DUF3089). This family of proteins has no known function.
Probab=96.39 E-value=0.0095 Score=37.22 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=50.0
Q ss_pred HHHHHHHHHCCCEEEEECCHHHC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HHHHCCCCEEEEEECCCCHHHHHHHH
Q ss_conf 99999999869899995860208-85536787666556399999999999999-99855995599993387228999999
Q gi|254780274|r 45 NDFREYFAEENVAVYIYSYRNTI-KTTSDYLRDYPKNTSDTTIVCDVMKLRTL-ISEKHGNTSVLLFGYSLGTIIALSTL 122 (317)
Q Consensus 45 ~~~~~~l~~~G~~V~a~D~rG~G-~s~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~~~~~~v~lvGhS~GG~ia~~~a 122 (317)
T Consensus 36 ~~QAs~F~~~-~~vyAP~YRQat~~~~~~~~~~-~~~~a~~~AY~DV~~AF~~yl~~~n~grPfILagHSQGs~h~~rLl 113 (201)
T pfam11288 36 RAQASPFNEV-CRVFAPRYRQATLGAFLATDRG-EASAALDLAYSDVRRAFDAYLANDNGGRPFILAGHSQGALHLLRLL 113 (201)
T ss_pred HHHHHHHHCC-CCCCCCHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 9998899702-8534716888788887414431-0389999889999999999999659999679998356899999999
Q ss_pred HHC
Q ss_conf 968
Q gi|254780274|r 123 LKY 125 (317)
Q Consensus 123 ~~~ 125 (317)
T Consensus 114 ~e~ 116 (201)
T pfam11288 114 REE 116 (201)
T ss_pred HHH
T ss_conf 988