HHsearch alignment for GI: 254780276 and conserved domain: PRK07565

>PRK07565 dihydroorotate dehydrogenase 2; Reviewed.
Probab=96.46  E-value=0.049  Score=35.43  Aligned_cols=88  Identities=23%  Similarity=0.300  Sum_probs=61.1

Q ss_pred             CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCE---ECCCCCC----CCHHHHHHHHHHH
Q ss_conf             08999999986543110123443003674102789999753432102443200---1234334----3178899999998
Q gi|254780276|r   50 TLSHEEHCRIIELCVKTVASRVPVMAGIGSNNTRESVELAQYAHSIGADALLV---VIPYYNK----PNRRGLLAHFGEI  122 (292)
Q Consensus        50 ~Ls~~Er~~~~~~~~~~~~~r~pii~gv~~~~~~~~i~~a~~a~~~Gad~i~v---~~P~~~~----~~~~~i~~~~~~i  122 (292)
T Consensus        83 n~g~e~~l~~i~~~k~~~--~~pvIaSi~g~s~ee~~~~a~~~e~~gadaiElNis~~~~~~~~~~~~~~~~~~~iv~~V  160 (333)
T PRK07565         83 RGGPEEYLELIRRAKEAV--DIPVIASLNGSSAGGWVDYARQIEEAGADALELNIYYLPTDPDISGAEVEQRYLDILRAV  160 (333)
T ss_pred             CCCHHHHHHHHHHHHHCC--CCCEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             868999999999877505--984598747799899999999997649988999766779886544465078899999999


Q ss_pred             HHHHCCCCEEEECHHHC
Q ss_conf             75302330121001111
Q gi|254780276|r  123 ATTVSSPIYIYNNPSRT  139 (292)
Q Consensus       123 ~~~~~~pi~iYn~P~~~  139 (292)
T Consensus       161 ~~~~~~Pv~vKLsPn~t  177 (333)
T PRK07565        161 KSAVSIPVAVKLSPYFS  177 (333)
T ss_pred             HHHCCCCEEEECCCCCC
T ss_conf             86468856873599821