HHsearch alignment for GI: 254780276 and conserved domain: PRK08318

Probab=94.62  E-value=0.18  Score=31.25  Aligned_cols=87  Identities=18%  Similarity=0.086  Sum_probs=56.3

Q ss_pred             CHHHHHHHHHHHHHCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCE--ECCCC---------CCCCHHHHHHHH
Q ss_conf             9999999865431101234430036741-02789999753432102443200--12343---------343178899999
Q gi|254780276|r   52 SHEEHCRIIELCVKTVASRVPVMAGIGS-NNTRESVELAQYAHSIGADALLV--VIPYY---------NKPNRRGLLAHF  119 (292)
Q Consensus        52 s~~Er~~~~~~~~~~~~~r~pii~gv~~-~~~~~~i~~a~~a~~~Gad~i~v--~~P~~---------~~~~~~~i~~~~  119 (292)
T Consensus        82 ~le~~L~~i~~~k~~~P~-~~vIaSI~g~~~~e~w~~la~~~e~~GaDalELNiSCPn~~~~~~~G~~~gq~pe~v~~i~  160 (413)
T PRK08318         82 PLEVNLREIRRVKRDYPD-RALIASIMVECNEEEWKEIAPLVEETGADGIELNFGCPHGMSERGMGSAVGQVPELVEMVT  160 (413)
T ss_pred             CHHHHHHHHHHHHHCCCC-CEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHCCCHHHHHHHH
T ss_conf             899999999998860789-7089999458788999999998665188779995556776666655511057999999999


Q ss_pred             HHHHHHHCCCCEEEECHHHC
Q ss_conf             99875302330121001111
Q gi|254780276|r  120 GEIATTVSSPIYIYNNPSRT  139 (292)
Q Consensus       120 ~~i~~~~~~pi~iYn~P~~~  139 (292)
T Consensus       161 ~~Vk~~~~iPV~vKLsPnvt  180 (413)
T PRK08318        161 RWVKRGSRLPVIAKLTPNIT  180 (413)
T ss_pred             HHHHHHCCCCEEEEECCCCC
T ss_conf             99885068856998289975