HHsearch alignment for GI: 254780276 and conserved domain: PRK09485

>PRK09485 mmuM homocysteine methyltransferase; Provisional.
Probab=94.66  E-value=0.47  Score=28.30  Aligned_cols=108  Identities=17%  Similarity=0.095  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCH-----HCCCHHHHHHHHHHHHHCCC------------CCCCCCCCCCCC---
Q ss_conf             9999999999997699899986723250-----10899999998654311012------------344300367410---
Q gi|254780276|r   21 EDAFVEHIEWQITEGSGGLVPAGTTGES-----STLSHEEHCRIIELCVKTVA------------SRVPVMAGIGSN---   80 (292)
Q Consensus        21 ~~~~~~~i~~l~~~gv~gi~~~G~tGE~-----~~Ls~~Er~~~~~~~~~~~~------------~r~pii~gv~~~---   80 (292)
T Consensus        45 Pd~V~~iH~~yi~AGAdiI~TNTy~a~~~~l~~~g~~~~~~~~l~~~av~lA~~A~~~~~~~~~~~~~~~VaGslgP~g~  124 (308)
T PRK09485         45 PELIYQVHLDYFRAGADIAITASYQATFQGFAARGLSEAEAEALIRRSVELAKEARDDVWAEKPQRPYLLVAGSVGPYGA  124 (308)
T ss_pred             HHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
T ss_conf             29999999999980878787245503789898749999999999999999999999997541368887069841575444


Q ss_pred             --------------HHHHHHH----HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE
Q ss_conf             --------------2789999----753432102443200123433431788999999987530233012
Q gi|254780276|r   81 --------------NTRESVE----LAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYI  132 (292)
Q Consensus        81 --------------~~~~~i~----~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~i  132 (292)
T Consensus       125 ~l~~g~ey~g~~~~~~~~~~~~~~~qi~~l~~~gvD~il~ET----~~~~~E~~~~~~~~~~~~~~pv~~  190 (308)
T PRK09485        125 YLADGSEYRGDYGLSVEELQDFHRPRIEALLDAGADLLALET----IPNLDEAEALVELLKEFPQVPAWL  190 (308)
T ss_pred             CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEE----CCCHHHHHHHHHHHHHCCCCCEEE
T ss_conf             237886667878999999999999999999727898899960----399999999999998557996899