HHsearch alignment for GI: 254780276 and conserved domain: PRK09490
>PRK09490 metH B12-dependent methionine synthase; Provisional.
Probab=97.79 E-value=0.0014 Score=46.74 Aligned_cols=258 Identities=14% Similarity=0.089 Sum_probs=137.8
Q ss_pred CCCCHH----HHHHHHHHHHHCCCCEEEECCCCCCHHCCCHHHHHHHHHHHH---HCCCCCCCCCCCCCC--CH-----H
Q ss_conf 886899----999999999976998999867232501089999999865431---101234430036741--02-----7
Q gi|254780276|r 17 NLIDED----AFVEHIEWQITEGSGGLVPAGTTGESSTLSHEEHCRIIELCV---KTVASRVPVMAGIGS--NN-----T 82 (292)
Q Consensus 17 ~~iD~~----~~~~~i~~l~~~gv~gi~~~G~tGE~~~Ls~~Er~~~~~~~~---~~~~~r~pii~gv~~--~~-----~ 82 (292)
T Consensus 156 g~itfdel~~~y~eQ~~~L~~gGvD~ili-----ET~~D~le~K-AAv~A~~e~~~~~~~~lPv~vs~T~~e~~Grtl~G 229 (1229)
T PRK09490 156 RNVTFDELVAAYREQTRGLIEGGADLILI-----ETIFDTLNAK-AAIFAVEEVFEELGVRLPVMISGTITDASGRTLSG 229 (1229)
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCEEEE-----ECCCCHHHHH-HHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEECC
T ss_conf 78899999999999999998559989999-----7124589999-99999999998519998589999998799987589
Q ss_pred HHHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEC---HHH-CCCCCCHHHHHHHHHHCCHH
Q ss_conf 89999753432102443200123433431788999999987530233012100---111-11211106899974320302
Q gi|254780276|r 83 RESVELAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNN---PSR-TVIEMDVDTMAELAATYPNI 158 (292)
Q Consensus 83 ~~~i~~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~---P~~-~g~~~~~~~l~~L~~~~pni 158 (292)
T Consensus 230 ~~~ea~~~~l~~l~~d~vGlN----Cs~Gp~~m~~~v~~l~~~~~~pisv~PNAGLP~~~g~Y~~tPee~a~~~~~f~~~ 305 (1229)
T PRK09490 230 QTTEAFWNSLRHAKPLSIGLN----CALGADELRPYVEELSRIADTYVSAHPNAGLPNAFGEYDETPEEMAAQIEEFAES 305 (1229)
T ss_pred CCHHHHHHHHHCCCCCEEEEE----CCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 989999999854898789770----8889899999999998428977797268989987898889999999999999984
Q ss_pred HHHH---CCCC-CHHHHHHHHHHCC---CC-------EEECCCCCCCHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 3310---0122-1135899997359---84-------03201322100124320334-4552222321100244444311
Q gi|254780276|r 159 VGVK---DATG-KIELVSEQRLSCG---FD-------FIQLSGEDSSALGFNAHGGV-GCISVTANVVPRICAEFQQAMI 223 (292)
Q Consensus 159 ~giK---~~~~-~~~~~~~~~~~~~---~~-------~~v~~G~~~~~~~~~~~G~~-G~is~~~n~~P~~~~~l~~~~~ 223 (292)
T Consensus 306 g~vnivGGCCGTTPeHI~al~~~v~~~~Pr~~~~~~~~~~~S~~~~~-----~~~~~~~~~~IGERiN~tGskkf~~~l~ 380 (1229)
T PRK09490 306 GFLNIVGGCCGTTPEHIAAIAEAVAGLPPRKLPEIPVACRLSGLEPL-----TIDKDSLFVNVGERTNVTGSAKFARLIK 380 (1229)
T ss_pred CCCEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECEEEE-----EECCCCCCEEEEEECCCCCCHHHHHHHH
T ss_conf 98005476679998999999987503898877888862466220468-----8548886046641005423099999998
Q ss_pred CCCCHHHHHHHH-HHHH---HHHHHHCCCCH---HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 788279999999-9999---99998426893---899999998698899876788889879899999999998559
Q gi|254780276|r 224 RGDYRQALLYQD-KLMP---LHQALFMEPAV---CCVKYALSRLGRNVSLAVRSPMVSTLEKDTMIAIDQALERLG 292 (292)
Q Consensus 224 ~gd~~~A~~l~~-~l~~---l~~~~~~~~~~---~~~K~~l~~~G~~~~~~~R~Pl~~~~~~e~~~~i~~~l~~lG 292 (292)
T Consensus 381 ~~d~~~~l~~A~~Qv~~GA~vLDVNv~~~~~D~~~~m~~~~~~l~~~-~~i~~vPl~IDS--s~~~viEaaLk~~~ 453 (1229)
T PRK09490 381 EEDYDEALDVARQQVENGAQIIDINMDEGMLDSEAAMVRFLNLIASE-PDIARVPIMIDS--SKWEVIEAGLKCIQ 453 (1229)
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC-CCCCCCCEEEEC--CCHHHHHHHHHHCC
T ss_conf 43989999999999975897887427876534699999999998436-654778846848--88899999998639