HHsearch alignment for GI: 254780276 and conserved domain: PRK11320
>PRK11320 prpB 2-methylisocitrate lyase; Provisional.
Probab=97.44 E-value=0.0044 Score=43.06 Aligned_cols=122 Identities=18% Similarity=0.156 Sum_probs=79.0
Q ss_pred CHHHHHHHHHHHHHCCCCEEEEC--------CCCCCHHCCCHHHHHHHHHHHHHCCCC-CCCCCCCC---CCCHHHHHHH
Q ss_conf 89999999999997699899986--------723250108999999986543110123-44300367---4102789999
Q gi|254780276|r 20 DEDAFVEHIEWQITEGSGGLVPA--------GTTGESSTLSHEEHCRIIELCVKTVAS-RVPVMAGI---GSNNTRESVE 87 (292)
Q Consensus 20 D~~~~~~~i~~l~~~gv~gi~~~--------G~tGE~~~Ls~~Er~~~~~~~~~~~~~-r~pii~gv---~~~~~~~~i~ 87 (292)
T Consensus 91 ~~~nv~rtV~~~e~aGvagi~IEDq~~pKrcgh~~gk~lv~~~e~~~KI~AA~~ar~~~df~IiARTDA~~~~gldeAi~ 170 (292)
T PRK11320 91 GAFNIARTIKSMIKAGAAAVHIEDQVGQKRCGHRPNKEIVSQEEMVDRIKAAVDARTDPDFVIMARTDALAVEGLDAAIE 170 (292)
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHH
T ss_conf 27889999999997499689841555665568666753334999999999999856799859999536334588699999
Q ss_pred HHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECHHHCCC--CCCHHHHHHH
Q ss_conf 753432102443200123433431788999999987530233012100111112--1110689997
Q gi|254780276|r 88 LAQYAHSIGADALLVVIPYYNKPNRRGLLAHFGEIATTVSSPIYIYNNPSRTVI--EMDVDTMAEL 151 (292)
Q Consensus 88 ~a~~a~~~Gad~i~v~~P~~~~~~~~~i~~~~~~i~~~~~~pi~iYn~P~~~g~--~~~~~~l~~L 151 (292)
T Consensus 171 Ra~aY~eAGAD~if~ea~----~~~ee~----~~~~~~~~~Pll~n~~--e~g~tP~~s~~el~~l 226 (292)
T PRK11320 171 RAQAYVEAGADMIFPEAI----TELDMY----RRFADAVKVPILANIT--EFGATPLFTTEELASA 226 (292)
T ss_pred HHHHHHHCCCCEEECCCC----CCHHHH----HHHHHHCCCCEEEEEC--CCCCCCCCCHHHHHHC
T ss_conf 999999779989941789----999999----9999977999899848--9999988799999977